Pregenerated sensors for FLT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029648Ensembl transcript IDs: ENSMUST00000031653.12, ENSMUST00000110529.6
Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | GAGCTAATGGGCTTACTGCCTCTAGTCCCACAGCTGCAGGGAGGGTaGGTGGGGCCATGGCCGGTGGGCGGGGCGGTCGCCAGAGGCACC | + |
Preference number: 1 (lower is better) Translates to: ELMGLLPLVPQLQGG*VGPWPVGGAVARGT Trigger: GGTGCCTCTGGCGACCGCCCCGCCCACCGGCCATGGCCCCACCCACCCTCCCTGCAGCTGTGGGACTAGAGGCAGTAAGCCCATTAGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | TTGGAAGGGGGCCCGAAACAGCGGAGGCCAGGAGTGAGAAGTCACTaGAGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGAC | + |
Preference number: 1 (lower is better) Translates to: LEGGPKQRRPGVRSH*SGIAEPPPARAPQD Trigger: GTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACTTCAGTGACTTCTCACTCCTGGCCTCCGCTGTTTCGGGCCCCCTTCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 90 bp | GAAGAAACCAGGCTGGTGAGTTCCCAGGCTCGAGGGCTGCCATGCTaGCACCGCCACAACACAGAACTGCCCAGCCATGTGCTTCTCAAG | + |
Preference number: 1 (lower is better) Translates to: EETRLVSSQARGLPC*HRHNTELPSHVLLK Trigger: CTTGAGAAGCACATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAACTCACCAGCCTGGTTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 90 bp | GAAGAAGAAACCAGGCTGGTGAGTTCCCAGGCTCGAGGGCTGCCATaGTGCCACCGCCACAACACAGAACTGCCCAGCCATGTGCTTCTC | + |
Preference number: 1 (lower is better) Translates to: EEETRLVSSQARGLP*CHRHNTELPSHVLL Trigger: GAGAAGCACATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAACTCACCAGCCTGGTTTCTTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 90 bp | CCAGTGTGGCTAGAAGCCCTTTCCTACTTGTCTAGTCCTGGCTGGTaGGTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGG | + |
Preference number: 1 (lower is better) Translates to: PVWLEALSYLSSPGW*VHQEPQWAAGCLSG Trigger: CCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCACTCACCAGCCAGGACTAGACAAGTAGGAAAGGGCTTCTAGCCACACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 90 bp | GGCTGCCATGCTGCCACCGCCACAACACAGAACTGCCCAGCCATGTaGTTCTCAAGCCCCACTATTTTGGTCATTATTGCTGGCTTCCCC | + |
Preference number: 1 (lower is better) Translates to: GCHAATATTQNCPAM*FSSPTILVIIAGFP Trigger: GGGGAAGCCAGCAATAATGACCAAAATAGTGGGGCTTGAGAAGCACATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 90 bp | CTGGTGAGTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTaGGGATTGCACTGGGCCTCCAGTCTCATCAGACAGAAAACCTTA | + |
Preference number: 1 (lower is better) Translates to: LVSAPRATVGCRLSQ*GLHWASSLIRQKTL Trigger: TAAGGTTTTCTGTCTGATGAGACTGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCACTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | CCTTTCCTCCATAAGAGAGACAGAGCAGGTCAGTGCATGCAGCCATaGGCTAATGGGCTTACTGCCTCTAGTCCCACAGCTGCAGGGAGG | + |
Preference number: 1 (lower is better) Translates to: PFLHKRDRAGQCMQP*ANGLTASSPTAAGR Trigger: CCTCCCTGCAGCTGTGGGACTAGAGGCAGTAAGCCCATTAGCTCATGGCTGCATGCACTGACCTGCTCTGTCTCTCTTATGGAGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 90 bp | ATGCACAAAACATACAGATACACACACACAAACACGTACAGTTCCTaGCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGT | + |
Preference number: 1 (lower is better) Translates to: MHKTYRYTHTNTYSS*HRGSRVPCPLPALS Trigger: ACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAACTGTACGTGTTTGTGTGTGTGTATCTGTATGTTTTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 90 bp | AGGCTAATGCAGACTTGCCTGACCTTCAGCTCCCTAGTCACACACTaGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGC | + |
Preference number: 1 (lower is better) Translates to: RLMQTCLTFSSLVTH*RSHTLGEMSVLPQC Trigger: GCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGGGAGCTGAAGGTCAGGCAAGTCTGCATTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 90 bp | CTGAGGCCCCTGAAAGTTCCTACCGGTGCTGAGGTATTGTTTCCCTaGAGGAAGACATTGCCTCAGAATGAACAAAGAGGCCAAAGAGCC | + |
Preference number: 1 (lower is better) Translates to: LRPLKVPTGAEVLFP*RKTLPQNEQRGQRA Trigger: GGCTCTTTGGCCTCTTTGTTCATTCTGAGGCAATGTCTTCCTCCAGGGAAACAATACCTCAGCACCGGTAGGAACTTTCAGGGGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTaGGCCTTGAATGGCAAACGGTTTGAATGCCACTGTCCAGGCTCT | + |
Preference number: 1 (lower is better) Translates to: SHTGRNVCSSSVPST*ALNGKRFECHCPGS Trigger: AGAGCCTGGACAGTGGCATTCAAACCGTTTGCCATTCAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | GAACTGATGATGGCTCTGGCCTCAGAAGCCAAGCGCCACCCCCACTaGCACATGTTAAATATGCTTTGGATGGTAAACAGACAACAGAAG | + |
Preference number: 1 (lower is better) Translates to: ELMMALASEAKRHPH*HMLNMLWMVNRQQK Trigger: CTTCTGTTGTCTGTTTACCATCCAAAGCATATTTAACATGTGTCAGTGGGGGTGGCGCTTGGCTTCTGAGGCCAGAGCCATCATCAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | CTGGACCTTCATAATTCACATTGGGACATAGCTTTACTCTCGGAATaGCATCAACATCTTGAGCCCCTGGGACCCATCTTAGAACCCTCC | + |
Preference number: 1 (lower is better) Translates to: LDLHNSHWDIALLSE*HQHLEPLGPILEPS Trigger: GGAGGGTTCTAAGATGGGTCCCAGGGGCTCAAGATGTTGATGTCATTCCGAGAGTAAAGCTATGTCCCAATGTGAATTATGAAGGTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 90 bp | GTGAGTACAGTGTCTCAGTTTAATGGAGTAGTTATTCAGTCCTGCTaGCGTGTATACATTCTAGTGAGGTGGCCTCAAGCCCAAGGGAGA | + |
Preference number: 1 (lower is better) Translates to: VSTVSQFNGVVIQSC*RVYILVRWPQAQGR Trigger: TCTCCCTTGGGCTTGAGGCCACCTCACTAGAATGTATACACGTCAGCAGGACTGAATAACTACTCCATTAAACTGAGACACTGTACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 90 bp | GGGAAAAGATTTAAGATTAACTGTGGTTCCCGAGAACATGTGCCCTaGTCTAGGAAACGTCCCTCATGTTCTGCTCTGATACCTCTTGGA | + |
Preference number: 1 (lower is better) Translates to: GKRFKINCGSREHVP*SRKRPSCSALIPLG Trigger: TCCAAGAGGTATCAGAGCAGAACATGAGGGACGTTTCCTAGACCAGGGCACATGTTCTCGGGAACCACAGTTAATCTTAAATCTTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | TCACCTGCTGTGCCAAGGAGCATAAAGTGCTTAATAAATATGGGCTaGTACTCTTTAGCTCCTCTCAGACTGCCTTGGGATGGTGAAATC | + |
Preference number: 1 (lower is better) Translates to: SPAVPRSIKCLINMG*YSLAPLRLPWDGEI Trigger: GATTTCACCATCCCAAGGCAGTCTGAGAGGAGCTAAAGAGTATCAGCCCATATTTATTAAGCACTTTATGCTCCTTGGCACAGCAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 90 bp | TCTTGGTATCCCTTACATATTCTGCACCCTTGTCTGAGCTTTCTCTaGACAGATTTGGTTCCTCATCTTAGGACATTAACAAGGGGAGAG | + |
Preference number: 1 (lower is better) Translates to: SWYPLHILHPCLSFL*TDLVPHLRTLTRGE Trigger: CTCTCCCCTTGTTAATGTCCTAAGATGAGGAACCAAATCTGTTCAGAGAAAGCTCAGACAAGGGTGCAGAATATGTAAGGGATACCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 90 bp | ATATATATATATCAAAAGAGGTTGGCATCAGAGTGGAAGAAAAGATaGGTCCCAGGTTGCTGCTATGAAGCAGAAGACAGAAGAGCAGAC | + |
Preference number: 1 (lower is better) Translates to: IYIYQKRLASEWKKR*VPGCCYEAEDRRAD Trigger: GTCTGCTCTTCTGTCTTCTGCTTCATAGCAGCAACCTGGGACGCATCTTTTCTTCCACTCTGATGCCAACCTCTTTTGATATATATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 90 bp | TTCCTGCAGGAAAACTCTCAGGATCAGCATTTGTTAAGGCCATTTTaGCATCCCAAGTTAAGAAGAATTATCATCACTCAGCAGGGTTAC | + |
Preference number: 1 (lower is better) Translates to: FLQENSQDQHLLRPF*HPKLRRIIITQQGY Trigger: GTAACCCTGCTGAGTGATGATAATTCTTCTTAACTTGGGATGTCAAAATGGCCTTAACAAATGCTGATCCTGAGAGTTTTCCTGCAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 90 bp | AGGACTGATTATACAACAATGAATGGAATTCTTAAAATTGTCTCTTaGGATGCACACCTTCCCCTACTCACAGGGAAGGAATGGACTTTG | + |
Preference number: 1 (lower is better) Translates to: RTDYTTMNGILKIVS*DAHLPLLTGKEWTL Trigger: CAAAGTCCATTCCTTCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCATTCATTGTTGTATAATCAGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 90 bp | TTTCTTTCTTTCTTGAATATTCTGGAAGGACTGATTATACAACAATaGATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCC | + |
Preference number: 1 (lower is better) Translates to: FLSFLNILEGLIIQQ*MEFLKLSLGMHTFP Trigger: GGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCATTCATTGTTGTATAATCAGTCCTTCCAGAATATTCAAGAAAGAAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCAGTCGCCAGAGGCACCTaGTCCTTCCTGTCCAGGTTA | + |
Preference number: 2 (lower is better) Translates to: SGIAEPPPARAPQDGRIPVARGT*SFLSRL Trigger: TAACCTGGACAGGAAGGAGCAGGTGCCTCTGGCGAC...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR TCA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTAGCGGAGGCCAGGAGTaGGAAGTCACTGAAGTGGCA | + |
Preference number: 2 (lower is better) Translates to: FLPPWVKGALPSPCTESRSGGQE*EVTEVA Trigger: TGCCACTTCAGTGACTTCTCACTCCTGGCCTCCGCT...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR GCA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTTGCGAAGGTCAGGCCTaGAAGCTTGGGTATGACCTC | + |
Preference number: 2 (lower is better) Translates to: FLPPWVKGALPSPCTESRCEGQA*KLGYDL Trigger: GAGGTCATACCCAAGCTTGCAGGCCTGACCTTCGCA...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTCGAGAACATGTGCCCTaGTCTAGGAAACGTCCCTCA | + |
Preference number: 2 (lower is better) Translates to: FLPPWVKGALPSPCTESRREHVP*SRKRPS Trigger: TGAGGGACGTTTCCTAGACCAGGGCACATGTTCTCG...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGACCACTCTGCCTCTCTaGGTCTTGGTCCAACCAGCC | + |
Preference number: 2 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGTTLPL*VLVQPA Trigger: GGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGT...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR GCA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGTGCTGCACTTTTGCCTaGAGTCAGGGGCTGTCAGTC | + |
Preference number: 2 (lower is better) Translates to: PTSDAVARIPCPLQESAACCTFA*SQGLSV Trigger: GACTGACAGCCCCTGACTGCAGGCAAAAGTGCAGCA...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTGCCGACAAGAGCTTTTaGGAATGGACAAAGATGTCT | + |
Preference number: 2 (lower is better) Translates to: FLPPWVKGALPSPCTESRADKSF*EWTKMS Trigger: AGACATCTTTGTCCATTCGCAAAAGCTCTTGTCGGC...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR GCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCATTAAGTGGCTAGCATaGTCTGCTCTCCCAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: LPSPCTESRATGFEQHCPIKWLA*SALPKQ Trigger: CTGCTTTGGGAGAGCAGAGCATGCTAGCCACTTAAT...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | GTTCCCAGGCTCGAGGGCTGCCATGCTGCCACCGCCACAACACAGAACTGCCCAGTGGAGCAGACCTGCTaGACCTTCATAATTCACATT | + |
Preference number: 2 (lower is better) Translates to: VPRLEGCHAATATTQNCPVEQTC*TFIIHI Trigger: AATGTGAATTATGAAGGTCCAGCAGGTCTGCTCCAC...TGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGTATTTTGGTCATTATTaGTGGCTTCCCCCAGCCATG | + |
Preference number: 2 (lower is better) Translates to: PTSDAVARIPCPLQESAAYFGHY*WLPPAM Trigger: CATGGCTGGGGGAAGCCAGCAATAATGACCAAAATA...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGTATTTTTGCTGGTCATaGGTAGCTAAAGACAGCCAC | + |
Preference number: 2 (lower is better) Translates to: PTSDAVARIPCPLQESAAYFCWS*VAKDSH Trigger: GTGGCTGTCTTTAGCTACTCATGACCAGCAAAAATA...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGACCCAGGCTCGAGGGCTaGCATGCTGCCACCGCCACA | + |
Preference number: 2 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGPRLEG*HAATAT Trigger: TGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGG...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGCTGGGACAACCACTCTaGCTCTCTGGGTCTTGGTCC | + |
Preference number: 2 (lower is better) Translates to: SHTGRNVCSSSVPSTWALLGQPL*LSGSWS Trigger: GGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAG...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCTCACACGTCACTAACTaGGGTTACATTCTTGTTAGT | + |
Preference number: 2 (lower is better) Translates to: LPSPCTESRATGFEQHCPSHVTN*GYILVS Trigger: ACTAACAAGAATGTAACCCCAGTTAGTGACGTGTGA...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | AGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTGTTCTCACAGCATTTGTGGACAGAGGAGGGTaGAGCAGACCTGCTGGACCT | + |
Preference number: 2 (lower is better) Translates to: SLSSGLTTSRLLIVLTAFVDRGG*SRPAGP Trigger: AGGTCCAGCAGGTCTGCTCCACCCTCCTCTGTCCAC...AAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | TATGACCCCAGGGTTGCTGGCCTGGTTTCCAGGTCTCTAATGATGTGGGATGTGTGCGTCCCAGGTTGCTaGTATGAAGCAGAAGACAGA | + |
Preference number: 2 (lower is better) Translates to: YDPRVAGLVSRSLMMWDVCVPGC*YEAEDR Trigger: TCTGTCTTCTGCTTCATAGCAGCAACCTGGGACGCA...CACATCCCACATCATTAGAGACCTGGAAACCAGGCCAGCAACCCTGGGGTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAAATACTGTCAGGGGCTaGTTGTCGGGGCTGGTGAGA | + |
Preference number: 2 (lower is better) Translates to: PSHTLAISHTGRNVCSSSNTVRG*LSGLVR Trigger: TCTCACCAGCCCCGACAACCAGCCCCTGACAGTATT...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 90 bp | TCTTGGGATGCACACCTTCCCCTACTCACAGGGAAGGAATGGACTTaGCATGCTCAGTTCAGTTCAGGTTTTGTTCTGAGGAGGCTCCCT | + |
Preference number: 2 (lower is better) Translates to: SWDAHLPLLTGKEWT*HAQFSSGFVLRRLP Trigger: AGGGAGCCTCCTCAGAACAAAACCTGAACTGAACTGAGCATGCAAAGTCCATTCCTTCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTTCGTCTGCCCAGCTGTaGCCGGCTCCGGCAGGTGTG | + |
Preference number: 2 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFSSAQL*PAPAGV Trigger: CACACCTGCCGGAGCCGGTCACAGCTGGGCAGACGA...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | TATGACCCCAGGGTTGCTGGCCTGGTTTCCAGGTCTCTAATGATGTGGGATGTGAGGTTGGCATCAGAGTaGAAGAAAAGATGCGTCCCA | + |
Preference number: 2 (lower is better) Translates to: YDPRVAGLVSRSLMMWDVRLASE*KKRCVP Trigger: TGGGACGCATCTTTTCTTCCACTCTGATGCCAACCT...CACATCCCACATCATTAGAGACCTGGAAACCAGGCCAGCAACCCTGGGGTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CAA 90 bp | AGTTTAGTAACTATAGCTGGGACAACCACTCTGCCTCTCTGGGTCTaGGTCCAACCAGCCCGATTTGGGTACAGAGAAACCCCTTTTCTA | + |
Preference number: 2 (lower is better) Translates to: SLVTIAGTTTLPLWV*VQPARFGYRETPFL Trigger: TAGAAAAGGGGTTTCTCTGTACCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGCTATAGTTACTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR GCA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGGAGTGGAAGAAAAGATaGGTCCCAGGTTGCTGCTAT | + |
Preference number: 2 (lower is better) Translates to: HLITAGNTRVITWVDRGGEWKKR*VPGCCY Trigger: ATAGCAGCAACCTGGGACGCATCTTTTCTTCCACTC...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGGCCACAACACAGAACTaGCCAGCCATGTGCTTCTCA | + |
Preference number: 2 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLATTQN*PAMCFS Trigger: TGAGAAGCACATGGCTGGGCAGTTCTGTGTTGTGGC...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGTGTCCAAACTCATTTTaGGAGGAGCGTTTCCTCTGG | + |
Preference number: 2 (lower is better) Translates to: HLITAGNTRVITWVDRGGCPNSF*EERFLW Trigger: CCAGAGGAAACGCTCCTCCCAAAATGAGTTTGGACA...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGACCCAGGTTGCTGCTATaGAGCAGAAGACAGAAGAGC | + |
Preference number: 2 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGPRLLL*SRRQKS Trigger: GCTCTTCTGTCTTCTGCTTCATAGCAGCAACCTGGG...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTCCAACCAGCCCGATTTaGGTACAGAGAAACCCCTTT | + |
Preference number: 2 (lower is better) Translates to: GSLHKLHITCCAKEHKVLPTSPI*VQRNPF Trigger: AAAGGGGTTTCTCTGTACCCAAATCGGGCTGGTTGG...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTTGCAGGCTGTCTCAGTaGGGATTGCACTGGGCCTCC | + |
Preference number: 2 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFCRLSQ*GLHWAS Trigger: GGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCA...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAGGACAAAGATGTCTTTaGCCAGCCCTACCTGATTTT | + |
Preference number: 2 (lower is better) Translates to: PSHTLAISHTGRNVCSSSGQRCL*PALPDF Trigger: AAAATCAGGTAGGGCTGGCCAAAGACATCTTTGTCC...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 90 bp | GAGGGCACTGGGCTTTCTTATTACGTTATCATGTCCAAACTCATTTaGGGAGGAGCGTTTCCTCTGGGCCTGAAAGTTAGCAACAGTAAC | + |
Preference number: 2 (lower is better) Translates to: EGTGLSYYVIMSKLI*GGAFPLGLKVSNSN Trigger: GTTACTGTTGCTAACTTTCAGGCCCAGAGGAAACGCTCCTCCCAAAATGAGTTTGGACATGATAACGTAATAAGAAAGCCCAGTGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGGACATTGCCTCAGAATaGACAAAGAGGCCAAAGAGC | + |
Preference number: 2 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLDIASE*TKRPKS Trigger: GCTCTTTGGCCTCTTTGTTCATTCTGAGGCAATGTC...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTAGCAGCTGGCTCCTGTaGAGCGGAATAGGTGTAAAC | + |
Preference number: 2 (lower is better) Translates to: AIVIRPQTRYETDENKMVSSWLL*SGIGVN Trigger: GTTTACACCTATTCCGCTCCACAGGAGCCAGCTGCT...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTTGCCTCTCTGGGTCTTaGTCCAACCAGCCCGATTTG | + |
Preference number: 2 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFCLSGS*SNQPDL Trigger: CAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCA...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR TCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGTTAATAAATATGGGCTaGTACTCTTTAGCTCCTCTC | + |
Preference number: 2 (lower is better) Translates to: SHTGRNVCSSSVPSTWALLINMG*YSLAPL Trigger: GAGAGGAGCTAAAGAGTATCAGCCCATATTTATTAA...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR GCA 90 bp | AGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTGTTCTCACAGCATTTTTTATAATGAAGGCTTaGTGCACTTTTGCCTGCAGT | + |
Preference number: 2 (lower is better) Translates to: SLSSGLTTSRLLIVLTAFFIMKA*CTFACS Trigger: ACTGCAGGCAAAAGTGCAGCAAGCCTTCATTATAAA...AAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | CAGAAGAGCAGACACACAAAAGAAACAGAGTACAGGGATCTTCAAATCCAAACACGTTTCCTCTGGGCCTaGAAGTTAGCAACAGTAACA | + |
Preference number: 2 (lower is better) Translates to: QKSRHTKETEYRDLQIQTRFLWA*KLATVT Trigger: TGTTACTGTTGCTAACTTTCAGGCCCAGAGGAAACG...TGTTTGGATTTGAAGATCCCTGTACTCTGTTTCTTTTGTGTGTCTGCTCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCAGGTTGTGGACATCTTTaGATGCCATCAAAGCTTGGT | + |
Preference number: 2 (lower is better) Translates to: FWSLLLASPSHVVHIQRSGCGHL*MPSKLG Trigger: ACCAAGCTTTGATGGCATTCAAAGATGTCCACAACC...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | AGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTGTTCTCACAGCATTTTATATCCTGGATACATaGGTTGTGGACATCTTTGAA | + |
Preference number: 2 (lower is better) Translates to: SLSSGLTTSRLLIVLTAFYILDT*VVDIFE Trigger: TTCAAAGATGTCCACAACCCATGTATCCAGGATATA...AAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | ATGGTTAGCTTTAACCCAAATCTTGCAAAGAACACCCAAAAGGGGCTAGTTGTACCTGGAGGAAGACATTaGCTCAGAATGAACAAAGAG | + |
Preference number: 2 (lower is better) Translates to: MVSFNPNLAKNTQKGLVVPGGRH*LRMNKE Trigger: CTCTTTGTTCATTCTGAGGCAATGTCTTCCTCCAGG...TACAACTAGCCCCTTTTGGGTGTTCTTTGCAAGATTTGGGTTAAAGCTAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | ATGCAATACATTATAATATTAAAAATACCACACAGGAACGGCAGTACCCTCCAGGGAGAAAAACAGAATTaGCTAAGGCCTCTCCCCTGC | + |
Preference number: 2 (lower is better) Translates to: MQYIIILKIPHRNGSTLQGEKQN*LRPLPC Trigger: GCAGGGGAGAGGCCTTAGGCAATTCTGTTTTTCTCC...CTGGAGGGTACTGCCGTTCCTGTGTGGTATTTTTAATATTATAATGTATTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCAATTCATGTCCGTCTTTaGCAGAAACCAGCATTTGCT | + |
Preference number: 2 (lower is better) Translates to: FWSLLLASPSHVVHIQRSIHVRL*QKPAFA Trigger: AGCAAATGCTGGTTTCTGCCAAAGACGGACATGAAT...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | ATGGTTAGCTTTAACCCAAATCTTGCAAAGAACACCCAAAAGGGGCTAGTTGTACGTAAAACGGGCACTTaGGGGGAAATGCTATTGTTT | + |
Preference number: 2 (lower is better) Translates to: MVSFNPNLAKNTQKGLVVRKTGT*GEMLLF Trigger: AAACAATAGCATTTCCCCCCAAGTGCCCGTTTTACG...TACAACTAGCCCCTTTTGGGTGTTCTTTGCAAGATTTGGGTTAAAGCTAACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATCAACTTCCAGGCTGCTaGTTGTTCTCACAGCATTTG | + |
Preference number: 2 (lower is better) Translates to: LKSQPAENFSIYNDLCMHQLPGC*LFSQHL Trigger: CAAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTG...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTGCTGGAGAGGGAGCTTaGATAAATTACACATCACCT | + |
Preference number: 2 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFAGEGA*INYTSP Trigger: AGGTGATGTGTAATTTATGCAAGCTCCCTCTCCAGC...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 90 bp | ATTCCTGCAGGAAAACTCTCAGGATCAGCATTTGTTAAGGCCATTTaGACATCCCAAGTTAAGAAGAATTATCATCACTCAGCAGGGTTA | + |
Preference number: 2 (lower is better) Translates to: IPAGKLSGSAFVKAI*TSQVKKNYHHSAGL Trigger: TAACCCTGCTGAGTGATGATAATTCTTCTTAACTTGGGATGTCAAAATGGCCTTAACAAATGCTGATCCTGAGAGTTTTCCTGCAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR TCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATCTCATAGGCCTTAAATaGCTTTTGGATACAGGGCCT | + |
Preference number: 2 (lower is better) Translates to: LKSQPAENFSIYNDLCMHLIGLK*LLDTGP Trigger: AGGCCCTGTATCCAAAAGTCATTTAAGGCCTATGAG...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR GCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATATAATGAAGGCTTGCTaGACTTTTGCCTGCAGTCAG | + |
Preference number: 2 (lower is better) Translates to: LKSQPAENFSIYNDLCMHIMKAC*TFACSQ Trigger: CTGACTGCAGGCAAAAGTGCAGCAAGCCTTCATTAT...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATCAAGCCCCACTATTTTaGTCATTATTGCTGGCTTCC | + |
Preference number: 2 (lower is better) Translates to: LKSQPAENFSIYNDLCMHQAPLF*SLLLAS Trigger: GGAAGCCAGCAATAATGACCAAAATAGTGGGGCTTG...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATATAGCCTTTATATCCTaGATACATGGGTTGTGGACA | + |
Preference number: 2 (lower is better) Translates to: LKSQPAENFSIYNDLCMHIAFIS*IHGLWT Trigger: TGTCCACAACCCATGTATCCAGGATATAAAGGCTAT...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTACTGTCAGGGGCTGGTaGTCGGGGCTGGTGAGAAGC | + |
Preference number: 3 (lower is better) Translates to: FLPPWVKGALPSPCTESRTVRGW*SGLVRS Trigger: GCTTCTCACCAGCCCCGACAACCAGCCCCTGACAGT...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | CTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTaGACTGAGTCCCGTGCAACAGGCTTTGAACAGCAC | + |
Preference number: 3 (lower is better) Translates to: LPPWVKGALPSP*TESRATGFEQH Trigger: GTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | AGGCTGGTGAGTTCCCAGGCTCGAGGGCTGCCATGCTaGCACCGCCACAACACAGAACTGCCCAGCCATGTG | + |
Preference number: 3 (lower is better) Translates to: RLVSSQARGLPC*HRHNTELPSHV Trigger: CACATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAACTCACCAGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | ACCAGGCTGGTGAGTTCCCAGGCTCGAGGGCTGCCATaGTGCCACCGCCACAACACAGAACTGCCCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: TRLVSSQARGLP*CHRHNTELPSH Trigger: ATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAACTCACCAGCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTCCCATGTCTACCCTGTaGCCATCGTCATTAGACCCC | + |
Preference number: 3 (lower is better) Translates to: FLPPWVKGALPSPCTESRPMSTL*PSSLDP Trigger: GGGGTCTAATGACGATGGCAACAGGGTAGACATGGG...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | GAAACAGCGGAGGCCAGGAGTGAGAAGTCACTGAAGTaGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACA | + |
Preference number: 3 (lower is better) Translates to: ETAEARSEKSLK*HSGAPSCTGST Trigger: TGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACTTCAGTGACTTCTCACTCCTGGCCTCCGCTGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCTGCCTCTCTGGGTCTaGGTCCAACCAGCCCGATTT | + |
Preference number: 3 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGLPLWV*VQPARF Trigger: AAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAG...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | GCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTaGGGATTGCACTGGGCCTCCAGTCTCATCAGACAG | + |
Preference number: 3 (lower is better) Translates to: APRATVGCRLSQ*GLHWASSLIRQ Trigger: CTGTCTGATGAGACTGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 72 bp | TGCCCTGGTCTAGGAAACGTCCCTCATGTTCTGCTCTaGTACCTCTTGGAAGGGGGCCCGAAACAGCGGAGG | + |
Preference number: 3 (lower is better) Translates to: CPGLGNVPHVLL*YLLEGGPKQRR Trigger: CCTCCGCTGTTTCGGGCCCCCTTCCAAGAGGTATCAGAGCAGAACATGAGGGACGTTTCCTAGACCAGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | GAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTaGACTGGGCCTCCAGTCTCATCAGACAGAAAACCT | + |
Preference number: 3 (lower is better) Translates to: EPQWAAGCLSGD*TGPPVSSDRKP Trigger: AGGTTTTCTGTCTGATGAGACTGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | GGCAGCTTAGGAATGGTTACCCTACAAGTGATGCTGTaGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGG | + |
Preference number: 3 (lower is better) Translates to: GSLGMVTLQVML*PGFHVPCRSLR Trigger: CCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGGGTAACCATTCCTAAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGTTTAAAATGTGGCTTTaGAGCCCATCAGTAGGCAAC | + |
Preference number: 3 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGFKMWL*SPSVGN Trigger: GTTGCCTACTGATGGGCTCAAAAGCCACATTTTAAA...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTAGCTTTTCTTTACTTTaGTGGGAAAGGGACATTTAC | + |
Preference number: 3 (lower is better) Translates to: FLPPWVKGALPSPCTESRSFSLL*WERDIY Trigger: GTAAATGTCCCTTTCCCACAAAAGTAAAGAAAAGCT...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR TCA 72 bp | CCTGCAGTCAGGGGCTGTCAGTCCAGCCAAGGACAATaGGGAACAGCATCTAATCACAGCAGGAAACACACG | + |
Preference number: 3 (lower is better) Translates to: PAVRGCQSSQGQ*GTASNHSRKHT Trigger: CGTGTGTTTCCTGCTGTGATTAGATGCTGTTCCTCATTGTCCTTGGCTGGACTGACAGCCCCTGACTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | CATAAGAGAGACAGAGCAGGTCAGTGCATGCAGCCATaGGCTAATGGGCTTACTGCCTCTAGTCCCACAGCT | + |
Preference number: 3 (lower is better) Translates to: HKRDRAGQCMQP*ANGLTASSPTA Trigger: AGCTGTGGGACTAGAGGCAGTAAGCCCATTAGCTCATGGCTGCATGCACTGACCTGCTCTGTCTCTCTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | TCGCCTGACTTACACACTGCAGCCGACAAGAGCTTTTaGGAATGGACAAAGATGTCTTTGGCCAGCCCTACC | + |
Preference number: 3 (lower is better) Translates to: SPDLHTAADKSF*EWTKMSLASPT Trigger: GGTAGGGCTGGCCAAAGACATCTTTGTCCATTCGCAAAAGCTCTTGTCGGCTGCAGTGTGTAAGTCAGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | GCCATGAGTGTTTATAATGAAGGCTTGCTGCACTTTTaGCTGCAGTCAGGGGCTGTCAGTCCAGCCAAGGAC | + |
Preference number: 3 (lower is better) Translates to: AMSVYNEGLLHF*LQSGAVSPAKD Trigger: GTCCTTGGCTGGACTGACAGCCCCTGACTGCAGGCAAAAGTGCAGCAAGCCTTCATTATAAACACTCATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | GCTGCCACCGCCACAACACAGAACTGCCCAGCCATGTaGTTCTCAAGCCCCACTATTTTGGTCATTATTGCT | + |
Preference number: 3 (lower is better) Translates to: AATATTQNCPAM*FSSPTILVIIA Trigger: AGCAATAATGACCAAAATAGTGGGGCTTGAGAAGCACATGGCTGGGCAGTTCTGTGTTGTGGCGGTGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGTCCTGTGCCTCCTGTTaGCTCTGTTCTCCCTTTCCT | + |
Preference number: 3 (lower is better) Translates to: SHTGRNVCSSSVPSTWALSCASC*LCSPFP Trigger: AGGAAAGGGAGAACAGAGCAAACAGGAGGCACAGGA...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR GCA 72 bp | CTTTCCTCCATAAGAGAGACAGAGCAGGTCAGTGCATaGAGCCATGAGCTAATGGGCTTACTGCCTCTAGTC | + |
Preference number: 3 (lower is better) Translates to: LSSIRETEQVSA*SHELMGLLPLV Trigger: GACTAGAGGCAGTAAGCCCATTAGCTCATGGCTGCATGCACTGACCTGCTCTGTCTCTCTTATGGAGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | CAGACTTGCCTGACCTTCAGCTCCCTAGTCACACACTaGCGATCTCACACACTGGGAGAAATGTCTGTTCTT | + |
Preference number: 3 (lower is better) Translates to: QTCLTFSSLVTH*RSHTLGEMSVL Trigger: AAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGGGAGCTGAAGGTCAGGCAAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGAATGACATCAACATCTaGAGCCCCTGGGACCCATCT | + |
Preference number: 3 (lower is better) Translates to: HLITAGNTRVITWVDRGGNDINI*SPWDPS Trigger: AGATGGGTCCCAGGGGCTCAAGATGTTGATGTCATT...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | GGGTTGTGGACATCTTTGAATGCCATCAAAGCTTGGTaGAGGGCTTTAAAACAGTGCCCAGGGGCCATGAGT | + |
Preference number: 3 (lower is better) Translates to: GLWTSLNAIKAW*RALKQCPGAMS Trigger: ACTCATGGCCCCTGGGCACTGTTTTAAAGCCCTTCACCAAGCTTTGATGGCATTCAAAGATGTCCACAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | CCTTCCCCTACTCACAGGGAAGGAATGGACTTTGCATaGTCAGTTCAGTTCAGGTTTTGTTCTGAGGAGGCT | + |
Preference number: 3 (lower is better) Translates to: PSPTHREGMDFA*SVQFRFCSEEA Trigger: AGCCTCCTCAGAACAAAACCTGAACTGAACTGAGCATGCAAAGTCCATTCCTTCCCTGTGAGTAGGGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGATGTCCAAACTCATTTaGGGAGGAGCGTTTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: HLITAGNTRVITWVDRGGMSKLI*GGAFPL Trigger: CAGAGGAAACGCTCCTCCCAAAATGAGTTTGGACAT...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | GCATCAGAGTGGAAGAAAAGATGCGTCCCAGGTTGCTaGTATGAAGCAGAAGACAGAAGAGCAGACACACAA | + |
Preference number: 3 (lower is better) Translates to: ASEWKKRCVPGC*YEAEDRRADTQ Trigger: TTGTGTGTCTGCTCTTCTGTCTTCTGCTTCATAGCAGCAACCTGGGACGCATCTTTTCTTCCACTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | TTGGCATCAGAGTGGAAGAAAAGATGCGTCCCAGGTTaGTGCTATGAAGCAGAAGACAGAAGAGCAGACACA | + |
Preference number: 3 (lower is better) Translates to: LASEWKKRCVPG*CYEAEDRRADT Trigger: TGTGTCTGCTCTTCTGTCTTCTGCTTCATAGCAGCAACCTGGGACGCATCTTTTCTTCCACTCTGATGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 72 bp | GGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTaGGCCTTGAATGGCAAACGGTTTGAATGCCACTGT | + |
Preference number: 3 (lower is better) Translates to: GRNVCSSSVPST*ALNGKRFECHC Trigger: ACAGTGGCATTCAAACCGTTTGCCATTCAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | TGGGATGCACACCTTCCCCTACTCACAGGGAAGGAATaGACTTTGCATGCTCAGTTCAGTTCAGGTTTTGTT | + |
Preference number: 3 (lower is better) Translates to: WDAHLPLLTGKE*TLHAQFSSGFV Trigger: AACAAAACCTGAACTGAACTGAGCATGCAAAGTCCATTCCTTCCCTGTGAGTAGGGGAAGGTGTGCATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | AGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTGTTCTCACAGCATTTGGGTTGTGGACATCTTaGAATGCCATCAAAGCTTGG | + |
Preference number: 3 (lower is better) Translates to: SLSSGLTTSRLLIVLTAFGLWTS*NAIKAW Trigger: CCAAGCTTTGATGGCATTCAAAGATGTCCACAACCC...AAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | AGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTGTTCTCACAGCATTTTCAAGCCCCACTATTTaGGTCATTATTGCTGGCTTC | + |
Preference number: 3 (lower is better) Translates to: SLSSGLTTSRLLIVLTAFSSPTI*VIIAGF Trigger: GAAGCCAGCAATAATGACCAAAATAGTGGGGCTTGA...AAATGCTGTGAGAACAATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | TGCGAATGGACAAAGATGTCTTTGGCCAGCCCTACCTaGTTTTCTTTTTCTCCAGTGTGGCTAGAAGCCCTT | + |
Preference number: 3 (lower is better) Translates to: CEWTKMSLASPT*FSFSPVWLEAL Trigger: AAGGGCTTCTAGCCACACTGGAGAAAAAGAAAATCAGGTAGGGCTGGCCAAAGACATCTTTGTCCATTCGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | CATTTGCAAATCCTAGGGCAGAAATCCAGAGGGTCTTaGTATCCCTTACATATTCTGCACCCTTGTCTGAGC | + |
Preference number: 3 (lower is better) Translates to: HLQILGQKSRGS*YPLHILHPCLS Trigger: GCTCAGACAAGGGTGCAGAATATGTAAGGGATACCAAGACCCTCTGGATTTCTGCCCTAGGATTTGCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | GTGTCTCAGTTTAATGGAGTAGTTATTCAGTCCTGCTaGCGTGTATACATTCTAGTGAGGTGGCCTCAAGCC | + |
Preference number: 3 (lower is better) Translates to: VSQFNGVVIQSC*RVYILVRWPQA Trigger: GGCTTGAGGCCACCTCACTAGAATGTATACACGTCAGCAGGACTGAATAACTACTCCATTAAACTGAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | AAAGATTTAAGATTAACTGTGGTTCCCGAGAACATGTaGCCTGGTCTAGGAAACGTCCCTCATGTTCTGCTC | + |
Preference number: 3 (lower is better) Translates to: KDLRLTVVPENM*PGLGNVPHVLL Trigger: GAGCAGAACATGAGGGACGTTTCCTAGACCAGGGCACATGTTCTCGGGAACCACAGTTAATCTTAAATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CCA 72 bp | TTTAAGATTAACTGTGGTTCCCGAGAACATGTGCCCTaGTCTAGGAAACGTCCCTCATGTTCTGCTCTGATA | + |
Preference number: 3 (lower is better) Translates to: FKINCGSREHVP*SRKRPSCSALI Trigger: TATCAGAGCAGAACATGAGGGACGTTTCCTAGACCAGGGCACATGTTCTCGGGAACCACAGTTAATCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGGAATGCCATCAAAGCTaGGTGAAGGGCTTTAAAACA | + |
Preference number: 3 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLECHQS*VKGFKT Trigger: TGTTTTAAAGCCCTTCACCAAGCTTTGATGGCATTC...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | GTGCCAAGGAGCATAAAGTGCTTAATAAATATGGGCTaGTACTCTTTAGCTCCTCTCAGACTGCCTTGGGAT | + |
Preference number: 3 (lower is better) Translates to: VPRSIKCLINMG*YSLAPLRLPWD Trigger: ATCCCAAGGCAGTCTGAGAGGAGCTAAAGAGTATCAGCCCATATTTATTAAGCACTTTATGCTCCTTGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTACTGGGGTTACATTCTaGTTAGTCAAAACAGCAACA | + |
Preference number: 3 (lower is better) Translates to: GSLHKLHITCCAKEHKVLTGVTF*LVKTAT Trigger: TGTTGCTGTTTTGACTAACAAGAATGTAACCCCAGT...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR-3UTR CAA 90 bp | ATGGTTAGCTTTAACCCAAATCTTGCAAAGAACACCCAAAAGGGGCTAGTTGTACTATTTTGGTCATTATaGCTGGCTTCCCCCAGCCAT | + |
Preference number: 3 (lower is better) Translates to: MVSFNPNLAKNTQKGLVVLFWSL*LASPSH Trigger: ATGGCTGGGGGAAGCCAGCAATAATGACCAAAATAG...TACAACTAGCCCCTTTTGGGTGTTCTTTGCAAGATTTGGGTTAAAGCTAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | GGTCTTGGTATCCCTTACATATTCTGCACCCTTGTCTaGGCTTTCTCTGAACAGATTTGGTTCCTCATCTTA | + |
Preference number: 3 (lower is better) Translates to: GLGIPYIFCTLV*AFSEQIWFLIL Trigger: TAAGATGAGGAACCAAATCTGTTCAGAGAAAGCTCAGACAAGGGTGCAGAATATGTAAGGGATACCAAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | TATATCCTGGATACATGGGTTGTGGACATCTTTGAATaGCATCAAAGCTTGGTGAAGGGCTTTAAAACAGTG | + |
Preference number: 3 (lower is better) Translates to: YILDTWVVDIFE*HQSLVKGFKTV Trigger: CACTGTTTTAAAGCCCTTCACCAAGCTTTGATGGCATTCAAAGATGTCCACAACCCATGTATCCAGGATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 72 bp | TGCATTAAATCTCCACTCACAATAGCCTTTATATCCTaGATACATGGGTTGTGGACATCTTTGAATGCCATC | + |
Preference number: 3 (lower is better) Translates to: CIKSPLTIAFIS*IHGLWTSLNAI Trigger: GATGGCATTCAAAGATGTCCACAACCCATGTATCCAGGATATAAAGGCTATTGTGAGTGGAGATTTAATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR-3UTR CAA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATATCCCCATAAAACATTaGCATATAGAGAAGGTGGAC | + |
Preference number: 3 (lower is better) Translates to: LKSQPAENFSIYNDLCMHIPIKH*HIEKVD Trigger: GTCCACCTTCTCTATATGCAAATGTTTTATGGGGAT...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR TCA 72 bp | CAGAACAATGTATCACCACTACTCATAGGCCTTAAATaGCTTTTGGATACAGGGCCTATAAAACACGAATTA | + |
Preference number: 3 (lower is better) Translates to: QNNVSPLLIGLK*LLDTGPIKHEL Trigger: TAATTCGTGTTTTATAGGCCCTGTATCCAAAAGTCATTTAAGGCCTATGAGTAGTGGTGATACATTGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR GCA 72 bp | CAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTaGATGCATGCTCATTACAATGTTGACATCTTTACA | + |
Preference number: 3 (lower is better) Translates to: QPAENFSIYNDL*MHAHYNVDIFT Trigger: TGTAAAGATGTCAACATTGTAATGAGCATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CCA 72 bp | AATATATATATATATCAAAAGAGGTTGGCATCAGAGTaGAAGAAAAGATGCGTCCCAGGTTGCTGCTATGAA | + |
Preference number: 3 (lower is better) Translates to: NIYIYQKRLASE*KKRCVPGCCYE Trigger: TTCATAGCAGCAACCTGGGACGCATCTTTTCTTCCACTCTGATGCCAACCTCTTTTGATATATATATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCATGCACGGGCCTGATGTaGCCACAGCTGGAGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: SGIAEPPPARAPQDGRIPCTGLM*PQLEKQ Trigger: CTGCTTCTCCAGCTGTGGCCACATCAGGCCCGTGCA...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCAGCTGCCAGGTCCCGATaGATGCACTTTCTGGAGGAC | + |
Preference number: 4 (lower is better) Translates to: SGIAEPPPARAPQDGRIPAARSR*MHFLED Trigger: GTCCTCCAGAAAGTGCATTCATCGGGACCTGGCAGC...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCACCCCCTTCTGGTTGGTaGCTCGGCACCTATAGACAC | + |
Preference number: 4 (lower is better) Translates to: SGIAEPPPARAPQDGRIPPPSGW*LGTYRH Trigger: GTGTCTATAGGTGCCGAGCCACCAACCAGAAGGGGG...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCCGTCCTGCACGGGCCTaGTGTGGCCACAGCTGGAGA | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCRPARA*CGHSWR Trigger: TCTCCAGCTGTGGCCACATCAGGCCCGTGCAGGACG...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCACACGGAGTTGTAGTCTaGGGGTGGAGAACAGCAGGA | + |
Preference number: 4 (lower is better) Translates to: SGIAEPPPARAPQDGRIPHGVVV*GWRTAG Trigger: TCCTGCTGTTCTCCACCCCCAGACTACAACTCCGTG...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCACCGTCTTCCTGCTGTaGTTTCCTGCACCGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPTVFLL*FPAPAA Trigger: AGCAGCCGGTGCAGGAAACCACAGCAGGAAGACGGT...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTCAAACTCCCACTTGCTaGCATCATAGGGCAGCCGTT | + |
Preference number: 4 (lower is better) Translates to: FLPPWVKGALPSPCTESRQTPTC*HHRAAV Trigger: AACGGCTGCCCTATGATGCCAGCAAGTGGGAGTTTG...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCTGAGCCATATCCTGTaGGAAGCAGACACCCGAGCA | + |
Preference number: 4 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGLSHIL*EADTRA Trigger: TGCTCGGGTGTCTGCTTCTCACAGGATATGGCTCAG...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCAAGAGTCTGGCCTGCTTaGATGACATGCTGGGTGCCT | + |
Preference number: 4 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPRVWPA*MTCWVP Trigger: AGGCACCCAGCATGTCATGCAAGCAGGCCAGACTCT...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGTTGAACCAAGTGATCTaGGGCGCGGGGACACCTCTA | + |
Preference number: 4 (lower is better) Translates to: AGTTTLPLWVLVQPARFGLNQVI*GAGTPL Trigger: TAGAGGTGTCCCCGCGCCTCAGATCACTTGGTTCAA...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTATGGTCTCAGTCCAGGTaGACCGCTTCAGCAAGGGGG | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELWSQSR*TASARG Trigger: CCCCCTTGCTGAAGCGGTTCACCTGGACTGAGACCA...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTTCCCAGGCTCGAGGGCTGCCATGCTGCCACCGCCACAACACAGAACTGCCCAAAGGTGCTGCAGAATTaGCTGTTATCCCTCCCACAG | + |
Preference number: 4 (lower is better) Translates to: VPRLEGCHAATATTQNCPKVLQN*LLSLPQ Trigger: CTGTGGGAGGGATAACAGGCAATTCTGCAGCACCTT...TGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCGGCAGCCGTTCACACTaGTCATCCAGGGGAACTTCA | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCGSRSH*SSRGTS Trigger: TGAAGTTCCCCTGGATGAGCAGTGTGAACGGCTGCC...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCTTTCAGTCTCTCCCGTaGAAACTCCCACTTGCTGGC | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPFQSLP*KLPLAG Trigger: GCCAGCAAGTGGGAGTTTGCACGGGAGAGACTGAAA...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAAGGCCGATGGGGGAGTaGTGCTCAGCCTTTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELRPMGE*CSAFCP Trigger: AGGACAAAAGGCTGAGCATCACTCCCCCATCGGCCT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGATGACCGTCATGCGCTaGGAGATGCTCTCAATTCTG | + |
Preference number: 4 (lower is better) Translates to: PTSDAVARIPCPLQESAAMTVMR*EMLSIL Trigger: CAGAATTGAGAGCATCTCTCAGCGCATGACGGTCAT...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCAAGTCCGGCAGGTGGGTaGTTTCTTAATGCCAAATGC | + |
Preference number: 4 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPSPAGG*FLNAKC Trigger: GCATTTGGCATTAAGAAATCACCCACCTGCCGGACT...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCTGTTGGACGTTGGCTTaGAGCAGGTCACCAAGTTTC | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPCWTLA*SRSPSF Trigger: GAAACTTGGTGACCTGCTTCAAGCCAACGTCCAACA...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGATATGTTCCTGGCTCTaGACGCATAGGTGCCCGAGT | + |
Preference number: 4 (lower is better) Translates to: AGTTTLPLWVLVQPARFGICSWL*THRCPS Trigger: ACTCGGGCACCTATGCGTGCAGAGCCAGGAACATAT...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCATAGAGAGGTGGGCTTaGAAGCGAGGACACGGACTT | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCIERWA*KRGHGL Trigger: AAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTAT...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | AGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATaGCACTGGGCCTCCAGTCTCATCAGACAGAAAACC | + |
Preference number: 4 (lower is better) Translates to: RATVGCRLSQWG*HWASSLIRQKT Trigger: GGTTTTCTGTCTGATGAGACTGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTATCAGGTCTTCCATGGTaGGGGGCTGCTTGGAGATCT | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELSGLPW*GAAWRS Trigger: AGATCTCCAAGCAGCCCCTCACCATGGAAGACCTGA...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGGGAGGTGGAGTTCGGTaGAAGCTCCTCAAAGGTTTT | + |
Preference number: 4 (lower is better) Translates to: AGTTTLPLWVLVQPARFGGGGVR*KLLKGF Trigger: AAAACCTTTGAGGAGCTTTCACCGAACTCCACCTCC...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTGCTTGCATGACATaGTGGGTGCCTTTTAAACTC | + |
Preference number: 4 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGPACMT*WVPFKL Trigger: GAGTTTAAAAGGCACCCAGCATGTCATGCAAGCAGG...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAATAGGACCGTCTTCCTaGTGTGGTTTCCTGCACCGG | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELIGPSS*CGFLHR Trigger: CCGGTGCAGGAAACCACAGCAGGAAGACGGTCCTAT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CCCGAAACAGCGGAGGCCAGGAGTGAGAAGTCACTGAAGTGGCATAGCGGAGCCCCAGGTCCCGATGAATaGACTTTCTGGAGGACAGAA | + |
Preference number: 4 (lower is better) Translates to: PETAEARSEKSLKWHSGAPGPDE*TFWRTE Trigger: TTCTGTCCTCCAGAAAGTGCATTCATCGGGACCTGG...GGCTCCGCTATGCCACTTCAGTGACTTCTCACTCCTGGCCTCCGCTGTTTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGCTGTGTATATGTTCCTaGCTCTGCACGCATAGGTGC | + |
Preference number: 4 (lower is better) Translates to: AGTTTLPLWVLVQPARFGLCICS*LCTHRC Trigger: GCACCTATGCGTGCAGAGCCAGGAACATATACACAG...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGAGTCACGTTTGCTCTTaGGGTAGTTGGACAGGTTTC | + |
Preference number: 4 (lower is better) Translates to: AGTTTLPLWVLVQPARFGSHVCS*GSWTGF Trigger: GAAACCTGTCCAACTACCTCAAGAGCAAACGTGACT...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTACCAGGCTCTCTTTCTTaGGCTCCATATGCAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELPGSLS*APYARL Trigger: CAGCCTTGCATATGGAGCTCAAGAAAGAGAGCCTGG...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCAGCTTGCATGACATGCTaGGTGCCTTTTAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPACMTC*VPFKLS Trigger: ACTGAGTTTAAAAGGCACCCAGCATGTCATGCAAGC...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGGGCAGAGACCATGAGTaGGCTGCCTCCCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: HLITAGNTRVITWVDRGGGRDHE*AASPLH Trigger: GTGCAGAGGGGAGGCAGCCCACTCATGGTCTCTGCC...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCGATAGTCCTCAAACATaGAGGTGGAGTTCGGTGAAA | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPDSPQT*RWSSVK Trigger: TTTCACCGAACTCCACCTCCATGTTTGAGGACTATC...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCATGGGTCCATAATGATTaGCAGGTAGTCTGTCTTTAC | + |
Preference number: 4 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPWVHND*QVVCLY Trigger: GTAAAGACAGACTACCTGTCAATCATTATGGACCCA...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAAAGGTGCTGCAGAATTaGCTGTTATCCCTCCCACAG | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELKVLQN*LLSLPQ Trigger: CTGTGGGAGGGATAACAGGCAATTCTGCAGCACCTT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | ACTATAGCTGGGACAACCACTCTGCCTCTCTGGGTCTaGGTCCAACCAGCCCGATTTGGGTACAGAGAAACC | + |
Preference number: 4 (lower is better) Translates to: TIAGTTTLPLWV*VQPARFGYRET Trigger: GGTTTCTCTGTACCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGCTATAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCCCTTTTTCATACACATaGACGGAGGTGTTGAAAGAC | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCPFSYT*TEVLKD Trigger: GTCTTTCAACACCTCCGTGCATGTGTATGAAAAAGG...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCATGAAAATGTGGATCTaGAAAGCCGTCCTTGAAAAG | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPMKMWI*KAVLEK Trigger: CTTTTCAAGGACGGCTTTGCAGATCCACATTTTCAT...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCAGTCATACCTTTCTTTaGAGTGATTGTGGTGACAGG | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCSHTFL*SDCGDR Trigger: CCTGTCACCACAATCACTCCAAAGAAAGGTATGACT...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | CGGGCTCCACAGGACGGACGCATCCCAAAGCCTTTTCCTGTGCCTCCTGTTTGCTGTACAGGAATTTATTaGCCACACAGGACAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: RAPQDGRIPKPFPVPPVCCTGIY*PHRTVS Trigger: TGAAACTGTCCTGTGTGGTCAATAAATTCCTGTACA...GCAAACAGGAGGCACAGGAAAAGGCTTTGGGATGCGTCCGTCCTGTGGAGCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCTTTCTTAATGCCAAATaGAGAGGCTTGAACGACTTT | + |
Preference number: 4 (lower is better) Translates to: LPSPCTESRATGFEQHCPFLNAK*RGLNDF Trigger: AAAGTCGTTCAAGCCTCTGCATTTGGCATTAAGAAA...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGTGGAGAAGCAGAAGCTaGGCCTCGGCAGATCGGAAA | + |
Preference number: 4 (lower is better) Translates to: SHTGRNVCSSSVPSTWALWRSRS*ASADRK Trigger: TTTCCGATCTGCCGAGGCCCAGCTTCTGCTTCTCCA...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CTGCAGTCAGGGGCTGTCAGTCCAGCCAAGGACAATGAGGAACAGCATCTAATCCCTGCTTGCATGACATaGTGGGTGCCTTTTAAACTC | + |
Preference number: 4 (lower is better) Translates to: LQSGAVSPAKDNEEQHLIPACMT*WVPFKL Trigger: GAGTTTAAAAGGCACCCAGCATGTCATGCAAGCAGG...GATTAGATGCTGTTCCTCATTGTCCTTGGCTGGACTGACAGCCCCTGACTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAACAGGTTTCCGTATTTaGAGTATTCCACGATCACCA | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELTGFRI*SIPRSP Trigger: TGGTGATCGTGGAATACTGCAAATACGGAAACCTGT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTCGGGGCTTCTGGCCCTaGTCCAGGCCTGGTTCCAGG | + |
Preference number: 4 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFRGFWP*SRPGSR Trigger: CCTGGAACCAGGCCTGGAGCAGGGCCAGAAGCCCCG...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGACCGTCTTCCTGCTGTaGTTTCCTGCACCGGCTGCT | + |
Preference number: 4 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLTVFLL*FPAPAA Trigger: AGCAGCCGGTGCAGGAAACCACAGCAGGAAGACGGT...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGAGGCCTTCACTTTCATaGACAGCCGATAGGACCGTC | + |
Preference number: 4 (lower is better) Translates to: SHTGRNVCSSSVPSTWALRPSLS*TADRTV Trigger: GACGGTCCTATCGGCTGTCCATGAAAGTGAAGGCCT...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAGAGCTTTGTACTCACTaGCTGTGGCCCCCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: PSHTLAISHTGRNVCSSSELCTH*LWPPLS Trigger: TGAAAGAGGGGGCCACAGCCAGTGAGTACAAAGCTC...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | CTGAGGCCCCTGAAAGTTCCTACCGGTGCTGAGGTATaGTTTCCCTGGAGGAAGACATTGCCTCAGAATGAA | + |
Preference number: 4 (lower is better) Translates to: LRPLKVPTGAEV*FPWRKTLPQNE Trigger: TTCATTCTGAGGCAATGTCTTCCTCCAGGGAAACAATACCTCAGCACCGGTAGGAACTTTCAGGGGCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGATGACCGTCATGCGCTaGGAGATGCTCTCAATTCTG | + |
Preference number: 4 (lower is better) Translates to: SHTGRNVCSSSVPSTWALMTVMR*EMLSIL Trigger: CAGAATTGAGAGCATCTCTCAGCGCATGACGGTCAT...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CTTCACACGTCACTAACTGGGGTTACATTCTTGTTAGTCAAAACAGCAACAACAGGCAGAGACCATGAGTaGGCTGCCTCCCCTCTGCAC | + |
Preference number: 4 (lower is better) Translates to: LHTSLTGVTFLLVKTATTGRDHE*AASPLH Trigger: GTGCAGAGGGGAGGCAGCCCACTCATGGTCTCTGCC...TGTTGTTGCTGTTTTGACTAACAAGAATGTAACCCCAGTTAGTGACGTGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | AATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTaGAATGGCAAACGGTTTGAATGCCACTGTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: NVCSSSVPSTWA*NGKRFECHCPG Trigger: GCCTGGACAGTGGCATTCAAACCGTTTGCCATTCAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | GCACACCTTCCCCTACTCACAGGGAAGGAATGGACTTaGCATGCTCAGTTCAGTTCAGGTTTTGTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: AHLPLLTGKEWT*HAQFSSGFVLR Trigger: CCTCAGAACAAAACCTGAACTGAACTGAGCATGCAAAGTCCATTCCTTCCCTGTGAGTAGGGGAAGGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGACTGAGCCATATCCTGTaGGAAGCAGACACCCGAGCA | + |
Preference number: 4 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGLSHIL*EADTRA Trigger: TGCTCGGGTGTCTGCTTCTCACAGGATATGGCTCAG...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCACCTCCCCTCTGCACTTaGGAAAGAGAGTCTGGCCTG | + |
Preference number: 4 (lower is better) Translates to: FWSLLLASPSHVVHIQRSPPLCT*ERESGL Trigger: CAGGCCAGACTCTCTTTCTCAAGTGCAGAGGGGAGG...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCATTAACCACATTCAGATaGTGGCCGATGTGGGTCAAG | + |
Preference number: 4 (lower is better) Translates to: PSHTLAISHTGRNVCSSSLTTFR*WPMWVK Trigger: CTTGACCCACATCGGCCATCATCTGAATGTGGTTAA...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTGATACCATTGATTAGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTATATGTTCCTGGCTCTaGACGCATAGGTGCCCGAGT | + |
Preference number: 4 (lower is better) Translates to: VIPLISLSSGLTTSRLLIICSWL*THRCPS Trigger: ACTCGGGCACCTATGCGTGCAGAGCCAGGAACATAT...AATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACTAATCAATGGTATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAATCTTAAGAACACTGTaGAACACATTGTTGTGGGAA | + |
Preference number: 4 (lower is better) Translates to: DGVHRGAGTHDAGPVRELILRTL*NTLLWE Trigger: TTCCCACAACAATGTGTTCCACAGTGTTCTTAAGAT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | CAAGCGCCACCCCCACTGACACATGTTAAATATGCTTaGGATGGTAAACAGACAACAGAAGACTCCCGGGAA | + |
Preference number: 4 (lower is better) Translates to: QAPPPLTHVKYA*DGKQTTEDSRE Trigger: TTCCCGGGAGTCTTCTGTTGTCTGTTTACCATCCAAAGCATATTTAACATGTGTCAGTGGGGGTGGCGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
3UTR CAA 72 bp | ACATGGGTTGTGGACATCTTTGAATGCCATCAAAGCTaGGTGAAGGGCTTTAAAACAGTGCCCAGGGGCCAT | + |
Preference number: 4 (lower is better) Translates to: TWVVDIFECHQS*VKGFKTVPRGH Trigger: ATGGCCCCTGGGCACTGTTTTAAAGCCCTTCACCAAGCTTTGATGGCATTCAAAGATGTCCACAACCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTCCTCCCCTCTGCACTTaGGAAAGAGAGTCTGGCCTG | + |
Preference number: 4 (lower is better) Translates to: AIVIRPQTRYETDENKMVPPLCT*ERESGL Trigger: CAGGCCAGACTCTCTTTCTCAAGTGCAGAGGGGAGG...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCAAGAGTCTGGCCTGCTTaGATGACATGCTGGGTGCCT | + |
Preference number: 4 (lower is better) Translates to: FWSLLLASPSHVVHIQRSRVWPA*MTCWVP Trigger: AGGCACCCAGCATGTCATGCAAGCAGGCCAGACTCT...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTCCAAGGTCAAGGTGCTaGAGAATTGCCTGTTATCCC | + |
Preference number: 4 (lower is better) Translates to: GSLHKLHITCCAKEHKVLPRSRC*RIACYP Trigger: GGGATAACAGGCAATTCTGCAGCACCTTGACCTTGG...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGCCAAGGTCAAGGTGCTaGAGAATTGCCTGTTATCCC | + |
Preference number: 4 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLPRSRC*RIACYP Trigger: GGGATAACAGGCAATTCTGCAGCACCTTGACCTTGG...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAACACATCGCTCTTGGTaGTGTAGACCTTGTCAAAGA | + |
Preference number: 4 (lower is better) Translates to: PSHTLAISHTGRNVCSSSTHRSW*CRPCQR Trigger: TCTTTGACAAGGTCTACAGCACCAAGAGCGATGTGT...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTGGGTTCTCATCCGCATaGCTTCCTTCAGGCGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFGFSSA*LPSGGC Trigger: GCAGCCGCCTGAAGGAAGGCATGCGGATGAGAACCC...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGAAGGCCTTCACTTTCATaGACAGCCGATAGGACCGTC | + |
Preference number: 4 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGRPSLS*TADRTV Trigger: GACGGTCCTATCGGCTGTCCATGAAAGTGAAGGCCT...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTCATACACGGTGCAAGTaGGGACTTGTCTGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: AIVIRPQTRYETDENKMVHTRCK*GLVCCP Trigger: TGGGCAGCAGACAAGTCCTCACTTGCACCGTGTATG...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CAGAAGAGCAGACACACAAAAGAAACAGAGTACAGGGATCTTCAAATCCAAACAATAGGACCGTCTTCCTaGTGTGGTTTCCTGCACCGG | + |
Preference number: 4 (lower is better) Translates to: QKSRHTKETEYRDLQIQTIGPSS*CGFLHR Trigger: CCGGTGCAGGAAACCACAGCAGGAAGACGGTCCTAT...TGTTTGGATTTGAAGATCCCTGTACTCTGTTTCTTTTGTGTGTCTGCTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTGTGCAAACTCCCACTTaGTGGCATCATAGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: AIVIRPQTRYETDENKMVVQTPT*WHHRAA Trigger: GGCTGCCCTATGATGCCAGCAAGTGGGAGTTTGCAC...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTTATTTGTTCCTTCTATaGCCGTCATGCGCTGAGAGA | + |
Preference number: 4 (lower is better) Translates to: GSLHKLHITCCAKEHKVLYLFLL*PSCAER Trigger: TCTCTCAGCGCATGACGGTCATAGAAGGAACAAATA...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGAGATGCTCTCTTAGTTaGTTTACCAGGGTAATTCCA | + |
Preference number: 4 (lower is better) Translates to: HLITAGNTRVITWVDRGGRCSLS*FTRVIP Trigger: TGGAATTACCCTGGTAAAGCAACTAAGAGAGCATCT...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGTTAAATAGCCTTGACTaGTTTATGCCCAGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: HLITAGNTRVITWVDRGGLNSLD*FMPSKI Trigger: GATCTTGCTGGGCATAAAGCAGTCAAGGCTATTTAA...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | CTGCAGTCAGGGGCTGTCAGTCCAGCCAAGGACAATGAGGAACAGCATCTAATCATTCTTCATTCTCAGTaGAGAAGTCATACCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: LQSGAVSPAKDNEEQHLIILHSQ*RSHTFL Trigger: AAGAAAGGTATGACTTCTGCACTGAGAATGAAGAAT...GATTAGATGCTGTTCCTCATTGTCCTTGGCTGGACTGACAGCCCCTGACTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
3UTR CAA 72 bp | GGGCTTTCTTATTACGTTATCATGTCCAAACTCATTTaGGGAGGAGCGTTTCCTCTGGGCCTGAAAGTTAGC | + |
Preference number: 4 (lower is better) Translates to: GLSYYVIMSKLI*GGAFPLGLKVS Trigger: GCTAACTTTCAGGCCCAGAGGAAACGCTCCTCCCAAAATGAGTTTGGACATGATAACGTAATAAGAAAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | ATGCAATACATTATAATATTAAAAATACCACACAGGAACGGCAGTACCCTCCAGCATACACGGTGCAAGTaGGGACTTGTCTGCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: MQYIIILKIPHRNGSTLQHTRCK*GLVCCP Trigger: TGGGCAGCAGACAAGTCCTCACTTGCACCGTGTATG...CTGGAGGGTACTGCCGTTCCTGTGTGGTATTTTTAATATTATAATGTATTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTAAAGAGAGTCTGGCCTaGTTGCATGACATGCTGGGT | + |
Preference number: 4 (lower is better) Translates to: AIVIRPQTRYETDENKMVKESLA*LHDMLG Trigger: ACCCAGCATGTCATGCAAGCAGGCCAGACTCTCTTT...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTGATACCATTGATTAGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTCCTTTTTCATACACATaGACGGAGGTGTTGAAAGAC | + |
Preference number: 4 (lower is better) Translates to: VIPLISLSSGLTTSRLLIPFSYT*TEVLKD Trigger: GTCTTTCAACACCTCCGTGCATGTGTATGAAAAAGG...AATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACTAATCAATGGTATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCATTGCTGATACTATGGTaGATGGTTCTGTTGTTAACT | + |
Preference number: 4 (lower is better) Translates to: PSHTLAISHTGRNVCSSSLLILW*MVLLLT Trigger: AGTTAACAACAGAACCATGCACCATAGTATCAGCAA...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTTCTTTGGGGTCTTTGTaGCAGCAATCCAACATGATT | + |
Preference number: 4 (lower is better) Translates to: GSLHKLHITCCAKEHKVLSLGSL*QQSNMI Trigger: AATCATGTTGGATTGCTGGCACAAAGACCCCAAAGA...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | CTTCACACGTCACTAACTGGGGTTACATTCTTGTTAGTCAAAACAGCAACAACAGAGGTGTTGAAAGACTaGAACGAGGACCCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: LHTSLTGVTFLLVKTATTEVLKD*NEDPLF Trigger: GAAGAGTGGGTCCTCGTTCCAGTCTTTCAACACCTC...TGTTGTTGCTGTTTTGACTAACAAGAATGTAACCCCAGTTAGTGACGTGTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR TCA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCATATTTGTTCCTTCTATaGCCGTCATGCGCTGAGAGA | + |
Preference number: 4 (lower is better) Translates to: FWSLLLASPSHVVHIQRSYLFLL*PSCAER Trigger: TCTCTCAGCGCATGACGGTCATAGAAGGAACAAATA...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | TCTCGTCTTTCGGCTCCTGCCTACAAGAGTGCTCAACCTAAGAATCATACTTTGTGTACAGGAATTTATTaGCCACACAGGACAGTTTCA | + |
Preference number: 4 (lower is better) Translates to: SRLSAPAYKSAQPKNHTLCTGIY*PHRTVS Trigger: TGAAACTGTCCTGTGTGGTCAATAAATTCCTGTACA...CAAAGTATGATTCTTAGGTTGAGCACTCTTGTAGGCAGGAGCCGAAAGACGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR TCA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTTGTGGGTCAAGATCTTaGGTTCGGTCATCAGAGCTT | + |
Preference number: 4 (lower is better) Translates to: AIVIRPQTRYETDENKMVCGSRS*VRSSEL Trigger: AAGCTCTGATGACCGAACTCAAGATCTTGACCCACA...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGTTTGTACGTTGCATTTaGTATTATAAAGCCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: SHTGRNVCSSSVPSTWALFVRCI*YYKASP Trigger: AGGAGAGGCTTTATAATAGCAAATGCAACGTACAAA...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTAGATGCTCTCTTAGTTaGTTTACCAGGGTAATTCCA | + |
Preference number: 4 (lower is better) Translates to: GSLHKLHITCCAKEHKVLRCSLS*FTRVIP Trigger: TGGAATTACCCTGGTAAAGCAACTAAGAGAGCATCT...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CCA 90 bp | ATGCAATACATTATAATATTAAAAATACCACACAGGAACGGCAGTACCCTCCAGATAGAGAGGTGGGCTTaGAAGCGAGGACACGGACTT | + |
Preference number: 4 (lower is better) Translates to: MQYIIILKIPHRNGSTLQIERWA*KRGHGL Trigger: AAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTAT...CTGGAGGGTACTGCCGTTCCTGTGTGGTATTTTTAATATTATAATGTATTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGAAGTCATACCTTTCTTTaGAGTGATTGTGGTGACAGG | + |
Preference number: 4 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGSHTFL*SDCGDR Trigger: CCTGTCACCACAATCACTCCAAAGAAAGGTATGACT...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | ATGGTTAGCTTTAACCCAAATCTTGCAAAGAACACCCAAAAGGGGCTAGTTGTAAGATCCGAGAGAAAATaGCCTTTTTGCCGCAGTGCT | + |
Preference number: 4 (lower is better) Translates to: MVSFNPNLAKNTQKGLVVRSERK*PFCRSA Trigger: AGCACTGCGGCAAAAAGGCCATTTTCTCTCGGATCT...TACAACTAGCCCCTTTTGGGTGTTCTTTGCAAGATTTGGGTTAAAGCTAACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | ATGGTTAGCTTTAACCCAAATCTTGCAAAGAACACCCAAAAGGGGCTAGTTGTAGCTTGCATGACATGCTaGGTGCCTTTTAAACTCAGT | + |
Preference number: 4 (lower is better) Translates to: MVSFNPNLAKNTQKGLVVACMTC*VPFKLS Trigger: ACTGAGTTTAAAAGGCACCCAGCATGTCATGCAAGC...TACAACTAGCCCCTTTTGGGTGTTCTTTGCAAGATTTGGGTTAAAGCTAACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATGAGGTGTTGAAAGACTaGAACGAGGACCCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: LKSQPAENFSIYNDLCMHEVLKD*NEDPLF Trigger: GAAGAGTGGGTCCTCGTTCCAGTCTTTCAACACCTC...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | ATGCAATACATTATAATATTAAAAATACCACACAGGAACGGCAGTACCCTCCAGCTGTGTATATGTTCCTaGCTCTGCACGCATAGGTGC | + |
Preference number: 4 (lower is better) Translates to: MQYIIILKIPHRNGSTLQLCICS*LCTHRC Trigger: GCACCTATGCGTGCAGAGCCAGGAACATATACACAG...CTGGAGGGTACTGCCGTTCCTGTGTGGTATTTTTAATATTATAATGTATTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CCA 90 bp | CTTCACACGTCACTAACTGGGGTTACATTCTTGTTAGTCAAAACAGCAACAACAGATGAATGCACTTTCTaGAGGACAGAAACTCCATGC | + |
Preference number: 4 (lower is better) Translates to: LHTSLTGVTFLLVKTATTDECTF*RTETPC Trigger: GCATGGAGTTTCTGTCCTCCAGAAAGTGCATTCATC...TGTTGTTGCTGTTTTGACTAACAAGAATGTAACCCCAGTTAGTGACGTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTATTCTTCATTCTCAGTaGAGAAGTCATACCTTTCTT | + |
Preference number: 4 (lower is better) Translates to: GSLHKLHITCCAKEHKVLILHSQ*RSHTFL Trigger: AAGAAAGGTATGACTTCTGCACTGAGAATGAAGAAT...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | GTTTCCATTTTTCTTCCTACCCTAAAAACTCAGAAGGAACCGTCTTCCTTCTTTTTAAATAGCCTTGACTaGTTTATGCCCAGCAAGATC | + |
Preference number: 4 (lower is better) Translates to: VSIFLPTLKTQKEPSSFFLNSLD*FMPSKI Trigger: GATCTTGCTGGGCATAAAGCAGTCAAGGCTATTTAA...AAAGAAGGAAGACGGTTCCTTCTGAGTTTTTAGGGTAGGAAGAAAAATGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR GCA 90 bp | CAGAAGAGCAGACACACAAAAGAAACAGAGTACAGGGATCTTCAAATCCAAACATTTGTACGTTGCATTTaGTATTATAAAGCCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: QKSRHTKETEYRDLQIQTFVRCI*YYKASP Trigger: AGGAGAGGCTTTATAATAGCAAATGCAACGTACAAA...TGTTTGGATTTGAAGATCCCTGTACTCTGTTTCTTTTGTGTGTCTGCTCTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR GCA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATTTGCTGATACTATGGTaGATGGTTCTGTTGTTAACT | + |
Preference number: 4 (lower is better) Translates to: LKSQPAENFSIYNDLCMHLLILW*MVLLLT Trigger: AGTTAACAACAGAACCATGCACCATAGTATCAGCAA...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTGATAGAGAGGTGGGCTaGGAAGCGAGGACACGGACT | + |
Preference number: 5 (lower is better) Translates to: FLPPWVKGALPSPCTESRDREVG*EARTRT Trigger: AGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATC...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS TCA 90 bp | GCTCAGCCTTTTGTCCTCCTGGCTCACGGTCGTGGGCAGAGACCATaGGTGGGCTGCCTCCCCTCTGCACTTGAGAAAGAGAGTCTGGCC | + |
Preference number: 5 (lower is better) Translates to: AQPFVLLAHGRGQRP*VGCLPSALEKESLA Trigger: GGCCAGACTCTCTTTCTCAAGTGCAGAGGGGAGGCAGCCCACTCATGGTCTCTGCCCACGACCGTGAGCCAGGAGGACAAAAGGCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 90 bp | CTCGTATTGAGCTCCGTGGTGGCGGTGCAGTTGAGGACAAGAGTCTaGCCGTGGAGCAGTCTCACTGGGCTCGGCGGGCGTATTTGGACA | + |
Preference number: 5 (lower is better) Translates to: LVLSSVVAVQLRTRV*PWSSLTGLGGRIWT Trigger: TGTCCAAATACGCCCGCCGAGCCCAGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCACGGAGCTCAATACGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | TTGAGCTCCGTGGTGGCGGTGCAGTTGAGGACAAGAGTCTGCCCGTaGAGCAGTCTCACTGGGCTCGGCGGGCGTATTTGGACATCTAGG | + |
Preference number: 5 (lower is better) Translates to: LSSVVAVQLRTRVCP*SSLTGLGGRIWTSR Trigger: CCTAGATGTCCAAATACGCCCGCCGAGCCCAGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCACGGAGCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGGATAGAGAGGTGGGCTaGGAAGCGAGGACACGGACT | + |
Preference number: 5 (lower is better) Translates to: PTSDAVARIPCPLQESAADREVG*EARTRT Trigger: AGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATC...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCAACCGGGGCCTCTCTTaGGGGTCTTTGTGCCAGCAA | + |
Preference number: 5 (lower is better) Translates to: LPSPCTESRATGFEQHCPNRGLS*GSLCQQ Trigger: TTGCTGGCACAAAGACCCCAAAGAGAGGCCCCGGTT...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | GACTCCTTTCCCAGCTCAGATTCATCGTCCTGCACGGGCCTGATGTaGCCACAGCTGGAGAAGCAGAAGCTGGGCCTCGGCAGATCGGAA | + |
Preference number: 5 (lower is better) Translates to: DSFPSSDSSSCTGLM*PQLEKQKLGLGRSE Trigger: TTCCGATCTGCCGAGGCCCAGCTTCTGCTTCTCCAGCTGTGGCCACATCAGGCCCGTGCAGGACGATGAATCTGAGCTGGGAAAGGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | GGCGGGCGGGGAGGAGTACAACACCACGGAGTTGTAGTCTGGGGGTaGAGAACAGCAGGACTCCTTTCCCAGCTCAGATTCATCGTCCTG | + |
Preference number: 5 (lower is better) Translates to: GGRGGVQHHGVVVWG*RTAGLLSQLRFIVL Trigger: CAGGACGATGAATCTGAGCTGGGAAAGGAGTCCTGCTGTTCTCCACCCCCAGACTACAACTCCGTGGTGTTGTACTCCTCCCCGCCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTGCCAAATGCAGAGGCTaGAACGACTTTCCCAAAAGC | + |
Preference number: 5 (lower is better) Translates to: FLPPWVKGALPSPCTESRAKCRG*NDFPKS Trigger: GCTTTTGGGAAAGTCGTTCAAGCCTCTGCATTTGGC...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | GGTCAAGGTGCTGCAGAATTGCCTGTTATCCCTCCCACAGGCCGATaGGGGAGTGATGCTCAGCCTTTTGTCCTCCTGGCTCACGGTCGT | + |
Preference number: 5 (lower is better) Translates to: GQGAAELPVIPPTGR*GSDAQPFVLLAHGR Trigger: ACGACCGTGAGCCAGGAGGACAAAAGGCTGAGCATCACTCCCCCATCGGCCTGTGGGAGGGATAACAGGCAATTCTGCAGCACCTTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCTGTGGAACACATTGTaGTGGGAATGGCTCCGGTCA | + |
Preference number: 5 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGLWNTL*WEWLRS Trigger: TGACCGGAGCCATTCCCACAACAATGTGTTCCACAG...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | AGTGGCATAGCGGAGCCCCCTCCTGCACGGGCTCCACAGGACGGACGCATCCCATCTAGAGACACGTTCTaGATGACAAGGTTCAGAGTG | + |
Preference number: 5 (lower is better) Translates to: SGIAEPPPARAPQDGRIPSRDTF*MTRFRV Trigger: CACTCTGAACCTTGTCATCAAGAACGTGTCTCTAGA...TGGGATGCGTCCGTCCTGTGGAGCCCGTGCAGGAGGGGGCTCCGCTATGCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TTCCTGCCACCGTGGGTCAAGGGTGCCCTGCCCTCTCCCTGCACTGAGTCCCGTAAGGCTGCGTCCTTGTaGAGACAGAATAAGTCACGT | + |
Preference number: 5 (lower is better) Translates to: FLPPWVKGALPSPCTESRKAASL*RQNKSR Trigger: ACGTGACTTATTCTGTCTCAACAAGGACGCAGCCTT...ACGGGACTCAGTGCAGGGAGAGGGCAGGGCACCCTTGACCCACGGTGGCAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | GCTGGGACAACCACTCTGCCTCTCTGGGTCTTGGTCCAACCAGCCCGATTTGGGATCTTCATGGAGGCCTaGGGCTTGGTCTCAGTCCAG | + |
Preference number: 5 (lower is better) Translates to: AGTTTLPLWVLVQPARFGIFMEA*GLVSVQ Trigger: CTGGACTGAGACCAAGCCCAAGGCCTCCATGAAGAT...CCCAAATCGGGCTGGTTGGACCAAGACCCAGAGAGGCAGAGTGGTTGTCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | GTTCCCAGGCTCGAGGGCTGCCATGCTGCCACCGCCACAACACAGAACTGCCCAGTCATGTGCACAAGTTaGGGTATGTCAGTGTGCATC | + |
Preference number: 5 (lower is better) Translates to: VPRLEGCHAATATTQNCPVMCTS*GMSVCI Trigger: GATGCACACTGACATACCCAAACTTGTGCACATGAC...TGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GTTCCCAGGCTCGAGGGCTGCCATGCTGCCACCGCCACAACACAGAACTGCCCATTTGGACATCTAGGATaGTATTGGTCTGCCGATGGG | + |
Preference number: 5 (lower is better) Translates to: VPRLEGCHAATATTQNCPFGHLG*YWSADG Trigger: CCCATCGGCAGACCAATACAATCCTAGATGTCCAAA...TGGGCAGTTCTGTGTTGTGGCGGTGGCAGCATGGCAGCCCTCGAGCCTGGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CTGCCCTCTCCCTGCACTGAGTCCCGTGCAACAGGCTTTGAACAGCACTGCCCCTCTGCAAAGCCGTCCTaGAAAAGGTCCTCAGAGAAG | + |
Preference number: 5 (lower is better) Translates to: LPSPCTESRATGFEQHCPSAKPS*KRSSEK Trigger: CTTCTCTGAGGACCTTTTCAAGGACGGCTTTGCAGA...GGGGCAGTGCTGTTCAAAGCCTGTTGCACGGGACTCAGTGCAGGGAGAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCAGTCATGTGCACAAGTTaGGGTATGTCAGTGTGCATC | + |
Preference number: 5 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPVMCTS*GMSVCI Trigger: GATGCACACTGACATACCCAAACTTGTGCACATGAC...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | CAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCCTCCATTTGGACATCTAGGATaGTATTGGTCTGCCGATGGG | + |
Preference number: 5 (lower is better) Translates to: QEPQWAAGCLSGDCTGPPFGHLG*YWSADG Trigger: CCCATCGGCAGACCAATACAATCCTAGATGTCCAAA...TGGAGGCCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | GTGCACCAAGAGCCACAGTGGGCTGCAGGCTGTCTCAGTGGGGATTGCACTGGGCGGCTCTCCACATTGTaGATCTTAAGAACACTGTGG | + |
Preference number: 5 (lower is better) Translates to: VHQEPQWAAGCLSGDCTGRLSTL*ILRTLW Trigger: CCACAGTGTTCTTAAGATCAACAATGTGGAGAGCCG...CCCAGTGCAATCCCCACTGAGACAGCCTGCAGCCCACTGTGGCTCTTGGTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | CCTACAAGTGATGCTGTGGCCCGGATTCCATGTCCCCTGCAGGAGTCTGCGGCGTGGTGCATGGTTCTGTaGTTAACTGTCCGTAGCAGA | + |
Preference number: 5 (lower is better) Translates to: PTSDAVARIPCPLQESAAWCMVL*LTVRSR Trigger: TCTGCTACGGACAGTTAACAACAGAACCATGCACCA...CGCCGCAGACTCCTGCAGGGGACATGGAATCCGGGCCACAGCATCACTTGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTATCGGTCATCAGAGCTTaGTACTCACTGGCTGTGGCC | + |
Preference number: 5 (lower is better) Translates to: DGVHRGAGTHDAGPVRELSVIRA*YSLAVA Trigger: GGCCACAGCCAGTGAGTACAAAGCTCTGATGACCGA...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS GCA 90 bp | GGGGAAGGCCTTCACTTTCATGGACAGCCGATAGGACCGTCTTCCTaGTGTGGTTTCCTGCACCGGCTGCTTCCGATGTTTCACACTGAT | + |
Preference number: 5 (lower is better) Translates to: GEGLHFHGQPIGPSS*CGFLHRLLPMFHTD Trigger: ATCAGTGTGAAACATCGGAAGCAGCCGGTGCAGGAAACCACAGCAGGAAGACGGTCCTATCGGCTGTCCATGAAAGTGAAGGCCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 90 bp | CGAGCGATTTGCCTAGTTTCAGTCTCTCCCGTGCAAACTCCCACTTaGTGGCATCATAGGGCAGCCGTTCACACTGCTCATCCAGGGGAA | + |
Preference number: 5 (lower is better) Translates to: RAICLVSVSPVQTPT*WHHRAAVHTAHPGE Trigger: TTCCCCTGGATGAGCAGTGTGAACGGCTGCCCTATGATGCCAGCAAGTGGGAGTTTGCACGGGAGAGACTGAAACTAGGCAAATCGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | CACGGTGCAAGTGAGGACTTGTCTGCTGCCCAGCGGATAGAGAGGTaGGCTTGGAAGCGAGGACACGGACTTTTCGTAGATCTGAGGTTT | + |
Preference number: 5 (lower is better) Translates to: HGASEDLSAAQRIER*AWKRGHGLFVDLRF Trigger: AAACCTCAGATCTACGAAAAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTCCTCACTTGCACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | TTTGGAGTGATTGTGGTGACAGGGGTGCCAGAGCCACGTGATTGTTaGCCGAGGGATGCCATACACGGTGCAAGTGAGGACTTGTCTGCT | + |
Preference number: 5 (lower is better) Translates to: FGVIVVTGVPEPRDC*PRDAIHGASEDLSA Trigger: AGCAGACAAGTCCTCACTTGCACCGTGTATGGCATCCCTCGGCCAACAATCACGTGGCTCTGGCACCCCTGTCACCACAATCACTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | GCAAGTGAGGACTTGTCTGCTGCCCAGCGGATAGAGAGGTGGGCTTaGAAGCGAGGACACGGACTTTTCGTAGATCTGAGGTTTCACGTT | + |
Preference number: 5 (lower is better) Translates to: ASEDLSAAQRIERWA*KRGHGLFVDLRFHV Trigger: AACGTGAAACCTCAGATCTACGAAAAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTCCTCACTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTACTCTCTTTGGGGTCTTaGTGCCAGCAATCCAACATG | + |
Preference number: 5 (lower is better) Translates to: DGVHRGAGTHDAGPVRELLSLGS*CQQSNM Trigger: CATGTTGGATTGCTGGCACAAAGACCCCAAAGAGAG...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS TCA 90 bp | TGGTCTGCCGATGGGTCAGATAGTTTGTCTGGTACAGGTGCCCGTTaGCGGTGGCTTCGCAGTTCAGCAGTCCTATCTCTTTGTACGTTG | + |
Preference number: 5 (lower is better) Translates to: WSADGSDSLSGTGAR*RWLRSSAVLSLCTL Trigger: CAACGTACAAAGAGATAGGACTGCTGAACTGCGAAGCCACCGTCAACGGGCACCTGTACCAGACAAACTATCTGACCCATCGGCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | GACCATGAGTGGGCTGCCTCCCCTCTGCACTTGAGAAAGAGAGTCTaGCCTGCTTGCATGACATGCTGGGTGCCTTTTAAACTCAGTTCA | + |
Preference number: 5 (lower is better) Translates to: DHEWAASPLHLRKRV*PACMTCWVPFKLSS Trigger: TGAACTGAGTTTAAAAGGCACCCAGCATGTCATGCAAGCAGGCCAGACTCTCTTTCTCAAGTGCAGAGGGGAGGCAGCCCACTCATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTATGGTGCATGGTTCTGTaGTTAACTGTCCGTAGCAGA | + |
Preference number: 5 (lower is better) Translates to: DGVHRGAGTHDAGPVRELWCMVL*LTVRSR Trigger: TCTGCTACGGACAGTTAACAACAGAACCATGCACCA...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAATGTGGGTCAAGATCTaGAGTTCGGTCATCAGAGCT | + |
Preference number: 5 (lower is better) Translates to: DGVHRGAGTHDAGPVRELMWVKI*SSVIRA Trigger: AGCTCTGATGACCGAACTCAAGATCTTGACCCACAT...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTCATCAGAGGCCCTCCTaGCTTCGTGCAGGCTCCCAG | + |
Preference number: 5 (lower is better) Translates to: GSLHKLHITCCAKEHKVLHQRPS*LRAGSQ Trigger: CTGGGAGCCTGCACGAAGCAAGGAGGGCCTCTGATG...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS GCA 90 bp | GACGTCACCCGGCAGGGGATGATGAGCTGTCTTCCTTCCGTCATGTaGACAAGTTTGGGTATGTCAGTGTGCATCTCTATGAAAGGACTC | + |
Preference number: 5 (lower is better) Translates to: DVTRQGMMSCLPSVM*TSLGMSVCISMKGL Trigger: GAGTCCTTTCATAGAGATGCACACTGACATACCCAAACTTGTGCACATGACGGAAGGAAGACAGCTCATCATCCCCTGCCGGGTGACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GATGGGGTACACAGGGGAGCAGGTACCCATGATGCTGGCCCGGTCAGAGAATTAGCAATCCAACATGATTaGGTAGATTTCAGGTGTGGC | + |
Preference number: 5 (lower is better) Translates to: DGVHRGAGTHDAGPVRELAIQHD*VDFRCG Trigger: GCCACACCTGAAATCTACCAAATCATGTTGGATTGC...TAATTCTCTGACCGGGCCAGCATCATGGGTACCTGCTCCCCTGTGTACCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TATGACCCCAGGGTTGCTGGCCTGGTTTCCAGGTCTCTAATGATGTGGGATGTGGAGAAAATGGCCTTTTaGCCGCAGTGCTCACCTCTA | + |
Preference number: 5 (lower is better) Translates to: YDPRVAGLVSRSLMMWDVEKMAF*PQCSPL Trigger: TAGAGGTGAGCACTGCGGCAAAAAGGCCATTTTCTC...CACATCCCACATCATTAGAGACCTGGAAACCAGGCCAGCAACCCTGGGGTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS TCA 90 bp | ACAGTCCGGCAGGTGGGTGATTTCTTAATGCCAAATGCAGAGGCTTaGACGACTTTCCCAAAAGCCCCTCTTCCGAGCGATTTGCCTAGT | + |
Preference number: 5 (lower is better) Translates to: TVRQVGDFLMPNAEA*TTFPKAPLPSDLPS Trigger: ACTAGGCAAATCGCTCGGAAGAGGGGCTTTTGGGAAAGTCGTTCAAGCCTCTGCATTTGGCATTAAGAAATCACCCACCTGCCGGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS TCA 90 bp | GGCCCCCTCTTTCAACATCTTCACAGCCACAGTCCGGCAGGTGGGTaGTTTCTTAATGCCAAATGCAGAGGCTTGAACGACTTTCCCAAA | + |
Preference number: 5 (lower is better) Translates to: GPLFQHLHSHSPAGG*FLNAKCRGLNDFPK Trigger: TTTGGGAAAGTCGTTCAAGCCTCTGCATTTGGCATTAAGAAATCACCCACCTGCCGGACTGTGGCTGTGAAGATGTTGAAAGAGGGGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | AGCCCCTTGTCTCGGCTCTCCACATTGTTGATCTTAAGAACACTGTaGAACACATTGTTGTGGGAATGGCTCCGGTCAATCCGCTGCCTT | + |
Preference number: 5 (lower is better) Translates to: SPLSRLSTLLILRTL*NTLLWEWLRSIRCL Trigger: AAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGTGGAGAGCCGAGACAAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | GAACTTCTGTCTTCCGAAGGATGTCTTCCCCTGTGTATATGTTCCTaGCTCTGCACGCATAGGTGCCCGAGTCTTCTAGAGACACGTTCT | + |
Preference number: 5 (lower is better) Translates to: ELLSSEGCLPLCICS*LCTHRCPSLLETRS Trigger: AGAACGTGTCTCTAGAAGACTCGGGCACCTATGCGTGCAGAGCCAGGAACATATACACAGGGGAAGACATCCTTCGGAAGACAGAAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAACATGCACGGAGGTGTaGAAAGACTGGAACGAGGAC | + |
Preference number: 5 (lower is better) Translates to: PSHTLAISHTGRNVCSSSTCTEV*KDWNED Trigger: GTCCTCGTTCCAGTCTTTCAACACCTCCGTGCATGT...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCAGAGAGTCTGGCCTGCTaGCATGACATGCTGGGTGCC | + |
Preference number: 5 (lower is better) Translates to: FWSLLLASPSHVVHIQRSESLAC*HDMLGA Trigger: GGCACCCAGCATGTCATGCAAGCAGGCCAGACTCTC...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGTCCAGGCTCTCTTTCTaGAGCTCCATATGCAAGGCT | + |
Preference number: 5 (lower is better) Translates to: SHTGRNVCSSSVPSTWALSRLSF*SSICKA Trigger: AGCCTTGCATATGGAGCTCAAGAAAGAGAGCCTGGA...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS GCA 90 bp | GGCTGCTTCCGATGTTTCACACTGATGAATCCTTTTTCATACACATaGACGGAGGTGTTGAAAGACTGGAACGAGGACCCACTCTTCACG | + |
Preference number: 5 (lower is better) Translates to: GCFRCFTLMNPFSYT*TEVLKDWNEDPLFT Trigger: CGTGAAGAGTGGGTCCTCGTTCCAGTCTTTCAACACCTCCGTGCATGTGTATGAAAAAGGATTCATCAGTGTGAAACATCGGAAGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTGAGAGTCTGGCCTGCTaGCATGACATGCTGGGTGCC | + |
Preference number: 5 (lower is better) Translates to: AIVIRPQTRYETDENKMVESLAC*HDMLGA Trigger: GGCACCCAGCATGTCATGCAAGCAGGCCAGACTCTC...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CCA 90 bp | GAATTTATTGACCACACAGGACAGTTTCAGGTCCTCTCCTTCGGCTaGCATCTTTTCCAAGGAAACGTGAAAGCCATTCGGCACATCTGT | + |
Preference number: 5 (lower is better) Translates to: EFIDHTGQFQVLSFG*HLFQGNVKAIRHIC Trigger: ACAGATGTGCCGAATGGCTTTCACGTTTCCTTGGAAAAGATGCCAGCCGAAGGAGAGGACCTGAAACTGTCCTGTGTGGTCAATAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GCCATCGTCATTAGACCCCAGACAAGGTATGAAACAGATGAAAATAAGATGGTTGGTGCAAGTGAGGACTaGTCTGCTGCCCAGCGGATA | + |
Preference number: 5 (lower is better) Translates to: AIVIRPQTRYETDENKMVGASED*SAAQRI Trigger: TATCCGCTGGGCAGCAGACAAGTCCTCACTTGCACC...AACCATCTTATTTTCATCTGTTTCATACCTTGTCTGGGGTCTAATGACGATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TCACACACTGGGAGAAATGTCTGTTCTTCCTCAGTGCCATCTACTTGGGCCTTGATTCTGTTTCCTAAGTaGCTGCTGGGATCCAGGATA | + |
Preference number: 5 (lower is better) Translates to: SHTGRNVCSSSVPSTWALILFPK*LLGSRI Trigger: TATCCTGGATCCCAGCAGCAACTTAGGAAACAGAAT...CAAGGCCCAAGTAGATGGCACTGAGGAAGAACAGACATTTCTCCCAGTGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | CATCTAATCACAGCAGGAAACACACGTGTAATTACCTGGGTGGACAGAGGAGGGTCTAGAGACACGTTCTaGATGACAAGGTTCAGAGTG | + |
Preference number: 5 (lower is better) Translates to: HLITAGNTRVITWVDRGGSRDTF*MTRFRV Trigger: CACTCTGAACCTTGTCATCAAGAACGTGTCTCTAGA...CCCTCCTCTGTCCACCCAGGTAATTACACGTGTGTTTCCTGCTGTGATTAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GGGAGCTTGCATAAATTACACATCACCTGCTGTGCCAAGGAGCATAAAGTGCTTTGCAAGGCTGCGTCCTaGTTGAGACAGAATAAGTCA | + |
Preference number: 5 (lower is better) Translates to: GSLHKLHITCCAKEHKVLCKAAS*LRQNKS Trigger: TGACTTATTCTGTCTCAACAAGGACGCAGCCTTGCA...AAGCACTTTATGCTCCTTGGCACAGCAGGTGATGTGTAATTTATGCAAGCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS TCA 90 bp | AATGTGCTAACCGTCTTATTTGTTCCTTCTATGACCGTCATGCGCTaGGAGATGCTCTCAATTCTGTTTCCTAAGTTGCTGCTGGGATCC | + |
Preference number: 5 (lower is better) Translates to: NVLTVLFVPSMTVMR*EMLSILFPKLLLGS Trigger: GGATCCCAGCAGCAACTTAGGAAACAGAATTGAGAGCATCTCTCAGCGCATGACGGTCATAGAAGGAACAAATAAGACGGTTAGCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 90 bp | GGTGGCTTCGCAGTTCAGCAGTCCTATCTCTTTGTACGTTGCATTTaGTATTATAAAGCCTCTCCTACTGTCCCATGTTATTCTTTGCCC | + |
Preference number: 5 (lower is better) Translates to: GGFAVQQSYLFVRCI*YYKASPTVPCYSLP Trigger: GGGCAAAGAATAACATGGGACAGTAGGAGAGGCTTTATAATAGCAAATGCAACGTACAAAGAGATAGGACTGCTGAACTGCGAAGCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 90 bp | CTCTCCACATTGTTGATCTTAAGAACACTGTGGAACACATTGTTGTaGGAATGGCTCCGGTCAATCCGCTGCCTTATAGATGCTCTCTTA | + |
Preference number: 5 (lower is better) Translates to: LSTLLILRTLWNTLL*EWLRSIRCLIDALL Trigger: TAAGAGAGCATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGTGGAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CCTAGTCACACACTGGCGATCTCACACACTGGGAGAAATGTCTGTTCTTCCTCAAGCAGTCCTATCTCTTaGTACGTTGCATTTGCTATT | + |
Preference number: 5 (lower is better) Translates to: PSHTLAISHTGRNVCSSSSSPIS*YVAFAI Trigger: AATAGCAAATGCAACGTACAAAGAGATAGGACTGCT...TGAGGAAGAACAGACATTTCTCCCAGTGTGTGAGATCGCCAGTGTGTGACTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATGGTGCAAGTGAGGACTaGTCTGCTGCCCAGCGGATA | + |
Preference number: 5 (lower is better) Translates to: LKSQPAENFSIYNDLCMHGASED*SAAQRI Trigger: TATCCGCTGGGCAGCAGACAAGTCCTCACTTGCACC...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GTGATACCATTGATTAGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTATTCTGTTTCCTAAGTaGCTGCTGGGATCCAGGATA | + |
Preference number: 5 (lower is better) Translates to: VIPLISLSSGLTTSRLLIILFPK*LLGSRI Trigger: TATCCTGGATCCCAGCAGCAACTTAGGAAACAGAAT...AATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACTAATCAATGGTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS CCA 90 bp | ACATTGTTGATCTTAAGAACACTGTGGAACACATTGTTGTGGGAATaGCTCCGGTCAATCCGCTGCCTTATAGATGCTCTCTTAGTTGCT | + |
Preference number: 5 (lower is better) Translates to: TLLILRTLWNTLLWE*LRSIRCLIDALLVA Trigger: AGCAACTAAGAGAGCATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCAGTAATTCCAGCTCATTaGCACCCTCGTATTGAGCTC | + |
Preference number: 5 (lower is better) Translates to: FWSLLLASPSHVVHIQRSVIPAH*HPRIEL Trigger: GAGCTCAATACGAGGGTGCAAATGAGCTGGAATTAC...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | TTTTGGTCATTATTGCTGGCTTCCCCCAGCCATGTAGTTCACATACAAAGATCACGGCTCTCCACATTGTaGATCTTAAGAACACTGTGG | + |
Preference number: 5 (lower is better) Translates to: FWSLLLASPSHVVHIQRSRLSTL*ILRTLW Trigger: CCACAGTGTTCTTAAGATCAACAATGTGGAGAGCCG...TGATCTTTGTATGTGAACTACATGGCTGGGGGAAGCCAGCAATAATGACCAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | CTTCACACGTCACTAACTGGGGTTACATTCTTGTTAGTCAAAACAGCAACAACAGTAATTCCAGCTCATTaGCACCCTCGTATTGAGCTC | + |
Preference number: 5 (lower is better) Translates to: LHTSLTGVTFLLVKTATTVIPAH*HPRIEL Trigger: GAGCTCAATACGAGGGTGCAAATGAGCTGGAATTAC...TGTTGTTGCTGTTTTGACTAACAAGAATGTAACCCCAGTTAGTGACGTGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS-3UTR CAA 90 bp | TTGAAATCACAGCCCGCAGAAAACTTTTCAATCTATAATGACTTGTGCATGCATCTGTGGAACACATTGTaGTGGGAATGGCTCCGGTCA | + |
Preference number: 5 (lower is better) Translates to: LKSQPAENFSIYNDLCMHLWNTL*WEWLRS Trigger: TGACCGGAGCCATTCCCACAACAATGTGTTCCACAG...ATGCATGCACAAGTCATTATAGATTGAAAAGTTTTCTGCGGGCTGTGATTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | ATGCAATACATTATAATATTAAAAATACCACACAGGAACGGCAGTACCCTCCAGACATGCACGGAGGTGTaGAAAGACTGGAACGAGGAC | + |
Preference number: 5 (lower is better) Translates to: MQYIIILKIPHRNGSTLQTCTEV*KDWNED Trigger: GTCCTCGTTCCAGTCTTTCAACACCTCCGTGCATGT...CTGGAGGGTACTGCCGTTCCTGTGTGGTATTTTTAATATTATAATGTATTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | ATGGAATTCTTAAAATTGTCTCTTGGGATGCACACCTTCCCCTACTCACAGGGACTCCTGCTTTTAAATTaGGAGATCCGAGAGAAAATG | + |
Preference number: 5 (lower is better) Translates to: MEFLKLSLGMHTFPYSQGLLLLN*EIREKM Trigger: CATTTTCTCTCGGATCTCCAAATTTAAAAGCAGGAG...TCCCTGTGAGTAGGGGAAGGTGTGCATCCCAAGAGACAATTTTAAGAATTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS-3UTR CAA 90 bp | GTGATACCATTGATTAGTCTTTCCTCTGGGCTGACAACTTCCAGGCTGCTGATTATGTTTGACATGACTTaGTGTGGTACAATCATTCCT | + |
Preference number: 5 (lower is better) Translates to: VIPLISLSSGLTTSRLLIMFDMT*CGTIIP Trigger: AGGAATGATTGTACCACACAAAGTCATGTCAAACAT...AATCAGCAGCCTGGAAGTTGTCAGCCCAGAGGAAAGACTAATCAATGGTATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110529.6 |
||
CDS GCA 72 bp | AGCTCCGTGGTGGCGGTGCAGTTGAGGACAAGAGTCTaGCCGTGGAGCAGTCTCACTGGGCTCGGCGGGCGT | + |
Preference number: 6 (lower is better) Translates to: SSVVAVQLRTRV*PWSSLTGLGGR Trigger: ACGCCCGCCGAGCCCAGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCACGGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | GTGGTGGCGGTGCAGTTGAGGACAAGAGTCTGCCCGTaGAGCAGTCTCACTGGGCTCGGCGGGCGTATTTGG | + |
Preference number: 6 (lower is better) Translates to: VVAVQLRTRVCP*SSLTGLGGRIW Trigger: CCAAATACGCCCGCCGAGCCCAGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 90 bp | CAGCTCATTTGCACCCTCGTATTGAGCTCCGTGGTGGCGGTGCAGTaGAGGACAAGAGTCTGCCCGTGGAGCAGTCTCACTGGGCTCGGC | + |
Preference number: 6 (lower is better) Translates to: QLICTLVLSSVVAVQ*RTRVCPWSSLTGLG Trigger: GCCGAGCCCAGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCACGGAGCTCAATACGAGGGTGCAAATGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | TCCTCCTGGCTCACGGTCGTGGGCAGAGACCATGAGTaGGCTGCCTCCCCTCTGCACTTGAGAAAGAGAGTC | + |
Preference number: 6 (lower is better) Translates to: SSWLTVVGRDHE*AASPLHLRKRV Trigger: GACTCTCTTTCTCAAGTGCAGAGGGGAGGCAGCCCACTCATGGTCTCTGCCCACGACCGTGAGCCAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | GGGCGGGGAGGAGTACAACACCACGGAGTTGTAGTCTaGGGGTGGAGAACAGCAGGACTCCTTTCCCAGCTC | + |
Preference number: 6 (lower is better) Translates to: GRGGVQHHGVVV*GWRTAGLLSQL Trigger: GAGCTGGGAAAGGAGTCCTGCTGTTCTCCACCCCCAGACTACAACTCCGTGGTGTTGTACTCCTCCCCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 72 bp | TGGCCGAGGGATGCCATACACGGTGCAAGTGAGGACTaGTCTGCTGCCCAGCGGATAGAGAGGTGGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: WPRDAIHGASED*SAAQRIERWAW Trigger: CCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTCCTCACTTGCACCGTGTATGGCATCCCTCGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | ATTGCCTGTTATCCCTCCCACAGGCCGATGGGGGAGTaGTGCTCAGCCTTTTGTCCTCCTGGCTCACGGTCG | + |
Preference number: 6 (lower is better) Translates to: IACYPSHRPMGE*CSAFCPPGSRS Trigger: CGACCGTGAGCCAGGAGGACAAAAGGCTGAGCATCACTCCCCCATCGGCCTGTGGGAGGGATAACAGGCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | GCTCCAGGTTTGACTTGTCTGAGGTTCCTTGCACGGTaGGGTAGGCTGCGCTTTCCACGGCCCCCTTCTGGT | + |
Preference number: 6 (lower is better) Translates to: APGLTCLRFLAR*GRLRFPRPPSG Trigger: ACCAGAAGGGGGCCGTGGAAAGCGCAGCCTACCTCACCGTGCAAGGAACCTCAGACAAGTCAAACCTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS GCA 72 bp | CAGCAGGACTCCTTTCCCAGCTCAGATTCATCGTCCTaGACGGGCCTGATGTGGCCACAGCTGGAGAAGCAG | + |
Preference number: 6 (lower is better) Translates to: QQDSFPSSDSSS*TGLMWPQLEKQ Trigger: CTGCTTCTCCAGCTGTGGCCACATCAGGCCCGTGCAGGACGATGAATCTGAGCTGGGAAAGGAGTCCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 72 bp | TGCACCCTCGTATTGAGCTCCGTGGTGGCGGTGCAGTaGAGGACAAGAGTCTGCCCGTGGAGCAGTCTCACT | + |
Preference number: 6 (lower is better) Translates to: CTLVLSSVVAVQ*RTRVCPWSSLT Trigger: AGTGAGACTGCTCCACGGGCAGACTCTTGTCCTCAACTGCACCGCCACCACGGAGCTCAATACGAGGGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 90 bp | CGTGATTGTTGGCCGAGGGATGCCATACACGGTGCAAGTGAGGACTaGTCTGCTGCCCAGCGGATAGAGAGGTGGGCTTGGAAGCGAGGA | + |
Preference number: 6 (lower is better) Translates to: RDCWPRDAIHGASED*SAAQRIERWAWKRG Trigger: TCCTCGCTTCCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTCCTCACTTGCACCGTGTATGGCATCCCTCGGCCAACAATCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | TGGAGTGATTGTGGTGACAGGGGTGCCAGAGCCACGTaGTTGTTGGCCGAGGGATGCCATACACGGTGCAAG | + |
Preference number: 6 (lower is better) Translates to: WSDCGDRGARAT*LLAEGCHTRCK Trigger: CTTGCACCGTGTATGGCATCCCTCGGCCAACAATCACGTGGCTCTGGCACCCCTGTCACCACAATCACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | CCGTGGAGCAGTCTCACTGGGCTCGGCGGGCGTATTTaGACATCTAGGATTGTATTGGTCTGCCGATGGGTC | + |
Preference number: 6 (lower is better) Translates to: PWSSLTGLGGRI*TSRIVLVCRWV Trigger: GACCCATCGGCAGACCAATACAATCCTAGATGTCCAAATACGCCCGCCGAGCCCAGTGAGACTGCTCCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | ATTGTGGTGACAGGGGTGCCAGAGCCACGTGATTGTTaGCCGAGGGATGCCATACACGGTGCAAGTGAGGAC | + |
Preference number: 6 (lower is better) Translates to: IVVTGVPEPRDC*PRDAIHGASED Trigger: GTCCTCACTTGCACCGTGTATGGCATCCCTCGGCCAACAATCACGTGGCTCTGGCACCCCTGTCACCACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | GACTTGTCTGCTGCCCAGCGGATAGAGAGGTGGGCTTaGAAGCGAGGACACGGACTTTTCGTAGATCTGAGG | + |
Preference number: 6 (lower is better) Translates to: DLSAAQRIERWA*KRGHGLFVDLR Trigger: CCTCAGATCTACGAAAAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | CTTTCATGGACAGCCGATAGGACCGTCTTCCTGCTGTaGTTTCCTGCACCGGCTGCTTCCGATGTTTCACAC | + |
Preference number: 6 (lower is better) Translates to: LSWTADRTVFLL*FPAPAASDVSH Trigger: GTGTGAAACATCGGAAGCAGCCGGTGCAGGAAACCACAGCAGGAAGACGGTCCTATCGGCTGTCCATGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | AGTGAGGACTTGTCTGCTGCCCAGCGGATAGAGAGGTaGGCTTGGAAGCGAGGACACGGACTTTTCGTAGAT | + |
Preference number: 6 (lower is better) Translates to: SEDLSAAQRIER*AWKRGHGLFVD Trigger: ATCTACGAAAAGTCCGTGTCCTCGCTTCCAAGCCCACCTCTCTATCCGCTGGGCAGCAGACAAGTCCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | CAGGCACTTTTAACTTCGACCCTGAGCCATATCCTGTaGGAAGCAGACACCCGAGCAGCGCGTAAGGCAAGA | + |
Preference number: 6 (lower is better) Translates to: QALLTSTLSHIL*EADTRAARKAR Trigger: TCTTGCCTTACGCGCTGCTCGGGTGTCTGCTTCTCACAGGATATGGCTCAGGGTCGAAGTTAAAAGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | CTTCACTTTCATGGACAGCCGATAGGACCGTCTTCCTaGTGTGGTTTCCTGCACCGGCTGCTTCCGATGTTT | + |
Preference number: 6 (lower is better) Translates to: LHFHGQPIGPSS*CGFLHRLLPMF Trigger: AAACATCGGAAGCAGCCGGTGCAGGAAACCACAGCAGGAAGACGGTCCTATCGGCTGTCCATGAAAGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | TGCCTAGTTTCAGTCTCTCCCGTGCAAACTCCCACTTaGTGGCATCATAGGGCAGCCGTTCACACTGCTCAT | + |
Preference number: 6 (lower is better) Translates to: CLVSVSPVQTPT*WHHRAAVHTAH Trigger: ATGAGCAGTGTGAACGGCTGCCCTATGATGCCAGCAAGTGGGAGTTTGCACGGGAGAGACTGAAACTAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 90 bp | GGAGCAGTCTCACTGGGCTCGGCGGGCGTATTTGGACATCTAGGATaGTATTGGTCTGCCGATGGGTCAGATAGTTTGTCTGGTACAGGT | + |
Preference number: 6 (lower is better) Translates to: GAVSLGSAGVFGHLG*YWSADGSDSLSGTG Trigger: ACCTGTACCAGACAAACTATCTGACCCATCGGCAGACCAATACAATCCTAGATGTCCAAATACGCCCGCCGAGCCCAGTGAGACTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | GATGGGTCAGATAGTTTGTCTGGTACAGGTGCCCGTTaGCGGTGGCTTCGCAGTTCAGCAGTCCTATCTCTT | + |
Preference number: 6 (lower is better) Translates to: DGSDSLSGTGAR*RWLRSSAVLSL Trigger: AAGAGATAGGACTGCTGAACTGCGAAGCCACCGTCAACGGGCACCTGTACCAGACAAACTATCTGACCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 90 bp | TCCTTGCTTTTACTCGCTATTCTCAAGTCTATCTTCATGGAGGCCTaGGGCTTGGTCTCAGTCCAGGTGAACCGCTTCAGCAAGGGGGAG | + |
Preference number: 6 (lower is better) Translates to: SLLLLAILKSIFMEA*GLVSVQVNRFSKGE Trigger: CTCCCCCTTGCTGAAGCGGTTCACCTGGACTGAGACCAAGCCCAAGGCCTCCATGAAGATAGACTTGAGAATAGCGAGTAAAAGCAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 90 bp | CGGCAGGGGATGATGAGCTGTCTTCCTTCCGTCATGTGCACAAGTTaGGGTATGTCAGTGTGCATCTCTATGAAAGGACTCCCTGCATCA | + |
Preference number: 6 (lower is better) Translates to: RQGMMSCLPSVMCTS*GMSVCISMKGLPAS Trigger: TGATGCAGGGAGTCCTTTCATAGAGATGCACACTGACATACCCAAACTTGTGCACATGACGGAAGGAAGACAGCTCATCATCCCCTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | CGGCAGGGGATGATGAGCTGTCTTCCTTCCGTCATGTaGACAAGTTTGGGTATGTCAGTGTGCATCTCTATG | + |
Preference number: 6 (lower is better) Translates to: RQGMMSCLPSVM*TSLGMSVCISM Trigger: CATAGAGATGCACACTGACATACCCAAACTTGTGCACATGACGGAAGGAAGACAGCTCATCATCCCCTGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | GGCTCGGCGGGCGTATTTGGACATCTAGGATTGTATTaGTCTGCCGATGGGTCAGATAGTTTGTCTGGTACA | + |
Preference number: 6 (lower is better) Translates to: GSAGVFGHLGLY*SADGSDSLSGT Trigger: TGTACCAGACAAACTATCTGACCCATCGGCAGACCAATACAATCCTAGATGTCCAAATACGCCCGCCGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | TCACTGGGCTCGGCGGGCGTATTTGGACATCTAGGATaGTATTGGTCTGCCGATGGGTCAGATAGTTTGTCT | + |
Preference number: 6 (lower is better) Translates to: SLGSAGVFGHLG*YWSADGSDSLS Trigger: AGACAAACTATCTGACCCATCGGCAGACCAATACAATCCTAGATGTCCAAATACGCCCGCCGAGCCCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | CAGGTGGGTGATTTCTTAATGCCAAATGCAGAGGCTTaGACGACTTTCCCAAAAGCCCCTCTTCCGAGCGAT | + |
Preference number: 6 (lower is better) Translates to: QVGDFLMPNAEA*TTFPKAPLPSD Trigger: ATCGCTCGGAAGAGGGGCTTTTGGGAAAGTCGTTCAAGCCTCTGCATTTGGCATTAAGAAATCACCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS TCA 72 bp | CCACATTCAGATGATGGCCGATGTGGGTCAAGATCTTaGGTTCGGTCATCAGAGCTTTGTACTCACTGGCTG | + |
Preference number: 6 (lower is better) Translates to: PHSDDGRCGSRS*VRSSELCTHWL Trigger: CAGCCAGTGAGTACAAAGCTCTGATGACCGAACTCAAGATCTTGACCCACATCGGCCATCATCTGAATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS GCA 72 bp | AGGCCTGGTTCCAGGCTCTCTTTCTTGAGCTCCATATaGAAGGCTGCGTCCTTGTTGAGACAGAATAAGTCA | + |
Preference number: 6 (lower is better) Translates to: RPGSRLSFLSSI*KAASLLRQNKS Trigger: TGACTTATTCTGTCTCAACAAGGACGCAGCCTTGCATATGGAGCTCAAGAAAGAGAGCCTGGAACCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 90 bp | AGGTGCCCGTTGACGGTGGCTTCGCAGTTCAGCAGTCCTATCTCTTaGTACGTTGCATTTGCTATTATAAAGCCTCTCCTACTGTCCCAT | + |
Preference number: 6 (lower is better) Translates to: RCPLTVASQFSSPIS*YVAFAIIKPLLLSH Trigger: ATGGGACAGTAGGAGAGGCTTTATAATAGCAAATGCAACGTACAAAGAGATAGGACTGCTGAACTGCGAAGCCACCGTCAACGGGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 90 bp | CGGCTCTCCACATTGTTGATCTTAAGAACACTGTGGAACACATTGTaGTGGGAATGGCTCCGGTCAATCCGCTGCCTTATAGATGCTCTC | + |
Preference number: 6 (lower is better) Translates to: RLSTLLILRTLWNTL*WEWLRSIRCLIDAL Trigger: GAGAGCATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGTGGAGAGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | CCGGTCAATCCGCTGCCTTATAGATGCTCTCTTAGTTaGTTTACCAGGGTAATTCCAGCTCATTTGCACCCT | + |
Preference number: 6 (lower is better) Translates to: PVNPLPYRCSLS*FTRVIPAHLHP Trigger: AGGGTGCAAATGAGCTGGAATTACCCTGGTAAAGCAACTAAGAGAGCATCTATAAGGCAGCGGATTGACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | CTGATGAATCCTTTTTCATACACATGCACGGAGGTGTaGAAAGACTGGAACGAGGACCCACTCTTCACGCGA | + |
Preference number: 6 (lower is better) Translates to: LMNPFSYTCTEV*KDWNEDPLFTR Trigger: TCGCGTGAAGAGTGGGTCCTCGTTCCAGTCTTTCAACACCTCCGTGCATGTGTATGAAAAAGGATTCATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | CTCTTTGGGGTCTTTGTGCCAGCAATCCAACATGATTaGGTAGATTTCAGGTGTGGCATACTCCGGGGTTCT | + |
Preference number: 6 (lower is better) Translates to: LFGVFVPAIQHD*VDFRCGILRGS Trigger: AGAACCCCGGAGTATGCCACACCTGAAATCTACCAAATCATGTTGGATTGCTGGCACAAAGACCCCAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031653.12 |
||
CDS CAA 90 bp | TCTCGGCTCTCCACATTGTTGATCTTAAGAACACTGTGGAACACATaGTTGTGGGAATGGCTCCGGTCAATCCGCTGCCTTATAGATGCT | + |
Preference number: 6 (lower is better) Translates to: SRLSTLLILRTLWNT*LWEWLRSIRCLIDA Trigger: AGCATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGTGGAGAGCCGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | CCTTCCGTCATGTGCACAAGTTTGGGTATGTCAGTGTaGATCTCTATGAAAGGACTCCCTGCATCACTAACA | + |
Preference number: 6 (lower is better) Translates to: PSVMCTSLGMSV*ISMKGLPASLT Trigger: TGTTAGTGATGCAGGGAGTCCTTTCATAGAGATGCACACTGACATACCCAAACTTGTGCACATGACGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | ATCTTAAGAACACTGTGGAACACATTGTTGTGGGAATaGCTCCGGTCAATCCGCTGCCTTATAGATGCTCTC | + |
Preference number: 6 (lower is better) Translates to: ILRTLWNTLLWE*LRSIRCLIDAL Trigger: GAGAGCATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | CGATGTTTCACACTGATGAATCCTTTTTCATACACATaGACGGAGGTGTTGAAAGACTGGAACGAGGACCCA | + |
Preference number: 6 (lower is better) Translates to: RCFTLMNPFSYT*TEVLKDWNEDP Trigger: TGGGTCCTCGTTCCAGTCTTTCAACACCTCCGTGCATGTGTATGAAAAAGGATTCATCAGTGTGAAACATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | TTGAGAAAGAGAGTCTGGCCTGCTTGCATGACATGCTaGGTGCCTTTTAAACTCAGTTCAGGCACTTTTAAC | + |
Preference number: 6 (lower is better) Translates to: LRKRVWPACMTC*VPFKLSSGTFN Trigger: GTTAAAAGTGCCTGAACTGAGTTTAAAAGGCACCCAGCATGTCATGCAAGCAGGCCAGACTCTCTTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | ATGATGAGCTGTCTTCCTTCCGTCATGTGCACAAGTTaGGGTATGTCAGTGTGCATCTCTATGAAAGGACTC | + |
Preference number: 6 (lower is better) Translates to: MMSCLPSVMCTS*GMSVCISMKGL Trigger: GAGTCCTTTCATAGAGATGCACACTGACATACCCAAACTTGTGCACATGACGGAAGGAAGACAGCTCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS TCA 72 bp | ACCGTCTTATTTGTTCCTTCTATGACCGTCATGCGCTaGGAGATGCTCTCAATTCTGTTTCCTAAGTTGCTG | + |
Preference number: 6 (lower is better) Translates to: TVLFVPSMTVMR*EMLSILFPKLL Trigger: CAGCAACTTAGGAAACAGAATTGAGAGCATCTCTCAGCGCATGACGGTCATAGAAGGAACAAATAAGACGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CCA 72 bp | TTGTTGATCTTAAGAACACTGTGGAACACATTGTTGTaGGAATGGCTCCGGTCAATCCGCTGCCTTATAGAT | + |
Preference number: 6 (lower is better) Translates to: LLILRTLWNTLL*EWLRSIRCLID Trigger: ATCTATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | TTGACGGTGGCTTCGCAGTTCAGCAGTCCTATCTCTTaGTACGTTGCATTTGCTATTATAAAGCCTCTCCTA | + |
Preference number: 6 (lower is better) Translates to: LTVASQFSSPIS*YVAFAIIKPLL Trigger: TAGGAGAGGCTTTATAATAGCAAATGCAACGTACAAAGAGATAGGACTGCTGAACTGCGAAGCCACCGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | ACATTGTTGATCTTAAGAACACTGTGGAACACATTGTaGTGGGAATGGCTCCGGTCAATCCGCTGCCTTATA | + |
Preference number: 6 (lower is better) Translates to: TLLILRTLWNTL*WEWLRSIRCLI Trigger: TATAAGGCAGCGGATTGACCGGAGCCATTCCCACAACAATGTGTTCCACAGTGTTCTTAAGATCAACAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS GCA 72 bp | GCAGTTCAGCAGTCCTATCTCTTTGTACGTTGCATTTaGTATTATAAAGCCTCTCCTACTGTCCCATGTTAT | + |
Preference number: 6 (lower is better) Translates to: AVQQSYLFVRCI*YYKASPTVPCY Trigger: ATAACATGGGACAGTAGGAGAGGCTTTATAATAGCAAATGCAACGTACAAAGAGATAGGACTGCTGAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |
||
CDS CAA 72 bp | TATTATAAAGCCTCTCCTACTGTCCCATGTTATTCTTaGCCCATCAGGGGTAAGAGTATCAAATGGAAACTT | + |
Preference number: 6 (lower is better) Translates to: YYKASPTVPCYS*PIRGKSIKWKL Trigger: AAGTTTCCATTTGATACTCTTACCCCTGATGGGCAAAGAATAACATGGGACAGTAGGAGAGGCTTTATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031653.12 ENSMUST00000110529.6 |