Pregenerated sensors for FLRT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051379Ensembl transcript IDs: ENSMUST00000056760.4, ENSMUST00000110057.3
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTAACAATTCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATaGTCCAGGCAGAAACCAAGATGCAGTTCTAGTATATGTACTGGT | + |
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Preference number: 1 (lower is better) Translates to: TNNSVCRIQLFQEPG*SRQKPRCSSSICTG Trigger: ACCAGTACATATACTAGAACTGCATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGAATTGTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR-3UTR TCA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTCTCCCTGCACTTACATaGTTCTTCTCACGAAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: IHVALDQGTYKTGQRAYSLPALT*FFSRSP Trigger: AGGACTTCGTGAGAAGAATCATGTAAGTGCAGGGAG...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR CAA 90 bp | CTTGAAGCTCTGCTGACGGTGGCTTCGACAGCTGAAGCCTTCACATaGTCCTTATGCCAGCTGATGTATTCAGTTCAGAAACTATGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LEALLTVASTAEAFT*SLCQLMYSVQKLCL Trigger: TAAGCATAGTTTCTGAACTGAATACATCAGCTGGCATAAGGACAATGTGAAGGCTTCAGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR-3UTR TCA 90 bp | ACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAATACCGCAGCAGCAACCTaGAATCTGAAACTTTTAATA | + |
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Preference number: 2 (lower is better) Translates to: TTRVSCERSPDCSTQRENTAAAT*NLKLLI Trigger: TATTAAAAGTTTCAGATTTCAGGTTGCTGCTGCGGT...ATTTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAACCGCAGCAGCAACCTaGAATCTGAAACTTTTAATA | + |
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Preference number: 2 (lower is better) Translates to: YQSEKRPVLILQGSHVNATAAAT*NLKLLI Trigger: TATTAAAAGTTTCAGATTTCAGGTTGCTGCTGCGGT...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACTCTTTTCCAGTGTTTTaGAGTAGAACAGAGTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PVLILQGSHVNAVLIVQHSFPVF*SRTEFL Trigger: TAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGA...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| 3UTR-3UTR GCA 90 bp | GTCGAATTTCAAAAGCTGAATACATGTAGCGTTGGATCAAGGCACATACAAGACGTGAAAAACGGCCTGTaGTTATACTACAAGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: VEFQKLNTCSVGSRHIQDVKNGL*LYYKGL Trigger: GAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCAC...GTCTTGTATGTGCCTTGATCCAACGCTACATGTATTCAGCTTTTGAAATTCGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR CAA 90 bp | ACTGTGACAGTAACGGGCAGTATGCTCCACCATGGTGAAAGTAAATaGAATAGTTATGTACAGTGTTCAAGCATCTCATATAAGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: TVTVTGSMLHHGESK*NSYVQCSSISYKPD Trigger: ATCTGGCTTATATGAGATGCTTGAACACTGTACATAACTATTCAATTTACTTTCACCATGGTGGAGCATACTGCCCGTTACTGTCACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR-3UTR GCA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAAAAATGTACAGTACATTaGTTCTCTCAGTCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKKCTVH*FSQSLF Trigger: GAAAAGAGACTGAGAGAAGCAATGTACTGTACATTT...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| 3UTR-3UTR GCA 90 bp | TCTACTTTTAGTGATGGTAACATAGTCCCGAAAGCAAGCACAATTATTCTGTTTAAATGTACAGTACATTaGTTCTCTCAGTCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: STFSDGNIVPKASTIILFKCTVH*FSQSLF Trigger: GAAAAGAGACTGAGAGAAGCAATGTACTGTACATTT...AAACAGAATAATTGTGCTTGCTTTCGGGACTATGTTACCATCACTAAAAGTAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR TCA 72 bp | TTCTTCTCACGAAGTCCTTTATTCTTGAAGCTCTGCTaGCGGTGGCTTCGACAGCTGAAGCCTTCACATTGT | + |
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Preference number: 3 (lower is better) Translates to: FFSRSPLFLKLC*RWLRQLKPSHC Trigger: ACAATGTGAAGGCTTCAGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAGAATAAAGGACTTCGTGAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR GCA 72 bp | GTGGCTTCGACAGCTGAAGCCTTCACATTGTCCTTATaGCAGCTGATGTATTCAGTTCAGAAACTATGCTTA | + |
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Preference number: 3 (lower is better) Translates to: VASTAEAFTLSL*QLMYSVQKLCL Trigger: TAAGCATAGTTTCTGAACTGAATACATCAGCTGGCATAAGGACAATGTGAAGGCTTCAGCTGTCGAAGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR TCA 72 bp | TCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATaGTCCAGGCAGAAACCAAGATGCAGTTCTAGTATA | + |
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Preference number: 3 (lower is better) Translates to: SVCRIQLFQEPG*SRQKPRCSSSI Trigger: TATACTAGAACTGCATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| 3UTR TCA 72 bp | TCTCACTTACTTAAAGCACTACTTTCTCTAGATCTCTaGGAGGAATTGCTGATGGTTGTTCTCAGACATCCT | + |
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Preference number: 3 (lower is better) Translates to: SHLLKALLSLDL*EELLMVVLRHP Trigger: AGGATGTCTGAGAACAACCATCAGCAATTCCTCTCAGAGATCTAGAGAAAGTAGTGCTTTAAGTAAGTGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | AGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTGCACTTTGCCAAAGGCTGGGCTATaGCCCAGTTTAAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVGSRHIQDWPKGVQCTLPKAGL*PSLSQL Trigger: CAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGG...CAAAGTGCACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACGCTTCCTCAGGCTTGTaGCGGGAAGGTTCACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHASSGL*REGSLA Trigger: CGCCAGTGAACCTTCCCGGCACAAGCCTGAGGAAGC...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTTCCACGGACCTTTTCTaGGGCTTGGCACATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: IHVALDQGTYKTGQRAYSSTDLF*GLAHEP Trigger: GGGCTCATGTGCCAAGCCCCAGAAAAGGTCCGTGGA...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAATCCACGGACCTTTTCTaGGGCTTGGCACATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKSTDLF*GLAHEP Trigger: GGGCTCATGTGCCAAGCCCCAGAAAAGGTCCGTGGA...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGTTTGGTCACAGGAGCTaGCCACTGTCCTTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AYTTRVSCERSPDCSTQRFGHRS*PLSLSR Trigger: CCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAA...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCTCTCTTGCTCTCGATTaGGGGTGGTTGTGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QSEKRPVLILQGSHVNAVSLALD*GWLWGC Trigger: ACAACCCCACAACCACCCTCAATCGAGAGCAAGAGA...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAACCACAGCCCCACCAATaGTGGCAGCCAAAGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKPQPHQ*WQPKVN Trigger: ATTTACCTTTGGCTGCCATCATTGGTGGGGCTGTGG...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTGCTTCCTCAGGCTTGTaGCGGGAAGGTTCACTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSASSGL*REGSLA Trigger: CGCCAGTGAACCTTCCCGGCACAAGCCTGAGGAAGC...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | TGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAAACCAAGATAAGCAAGGAGGGCGATaGTTACCAGGGCCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: CVEFNFFKSLDDPGRNQDKQGGR*LPGPQP Trigger: GGGCTGTGGCCCTGGTAAGCATCGCCCTCCTTGCTT...ATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAACCTTTTCTGGGGCTTaGCACATGAGCCCACGCACA | + |
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Preference number: 4 (lower is better) Translates to: YQSEKRPVLILQGSHVNATFSGA*HMSPRT Trigger: TGTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGT...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| 3UTR CAA 72 bp | CTGCTGACGGTGGCTTCGACAGCTGAAGCCTTCACATaGTCCTTATGCCAGCTGATGTATTCAGTTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLTVASTAEAFT*SLCQLMYSVQK Trigger: TTTCTGAACTGAATACATCAGCTGGCATAAGGACAATGTGAAGGCTTCAGCTGTCGAAGCCACCGTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACGGATTTAGCCACAACTaGCAGAGGTGCCACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHGFSHN*QRCHLE Trigger: TTCCAAGTGGCACCTCTGTCAGTTGTGGCTAAATCC...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGGCTTGTGAGACCATaGAGTGATGGGGAAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHRLVRP*SDGEEI Trigger: GATCTCTTCCCCATCACTTCATGGTCTCACAAGCCT...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCATCTCTTGCTCTCGATTaGGGGTGGTTGTGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: YQSEKRPVLILQGSHVNASLALD*GWLWGC Trigger: ACAACCCCACAACCACCCTCAATCGAGAGCAAGAGA...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAAAGCAAGGAGGGCGATaGTTACCAGGGCCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILKQGGR*LPGPQP Trigger: GGGCTGTGGCCCTGGTAAGCATCGCCCTCCTTGCTT...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | CTTCTCACGAAGTCCTTTATTCTTGAAGCTCTGCTGACGGTGGCTTCGACAGCTTGGAGATGGGTTCATTaGTTATCGGTAGCATCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLTKSFILEALLTVASTAWRWVH*LSVASG Trigger: TCCAGATGCTACCGATAAGCAATGAACCCATCTCCA...AGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAGAATAAAGGACTTCGTGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | TGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAAACCAAGATGGTCCGAGTCTGGGATaGCACTGTCTCTGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CVEFNFFKSLDDPGRNQDGPSLG*HCLCSS Trigger: GGAGCTACAGAGACAGTGGCATCCCAGACTCGGACC...ATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGGAAAGAAGTTTCCCTaGTTTCCAGGATGGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: AYTTRVSCERSPDCSTQRGKKFP*FPGWSC Trigger: ACAACTCCATCCTGGAAATCAGGGAAACTTCTTTCC...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAGGTCCGAGTCTGGGATaGCACTGTCTCTGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILGPSLG*HCLCSS Trigger: GGAGCTACAGAGACAGTGGCATCCCAGACTCGGACC...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGACAGAGGTGCCACTTaGAAGAACAGCCCAATTTTA | + |
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Preference number: 4 (lower is better) Translates to: AYTTRVSCERSPDCSTQRDRGAT*KNSPIL Trigger: TAAAATTGGGCTGTTCTTCCAAGTGGCACCTCTGTC...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCGAATTCCCACTGGAATaGATGTCAGAGAGCGATCGT | + |
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Preference number: 4 (lower is better) Translates to: QSEKRPVLILQGSHVNAVEFPLE*MSESDR Trigger: ACGATCGCTCTCTGACATCCATTCCAGTGGGAATTC...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTACCAAAGGCTGGGCTATaGCCCAGTTTAAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLPKAGL*PSLSQL Trigger: CAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGG...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACCGAAGAGGGGCAGTTTaGGTCTCAATACAAACAGGT | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHRRGAV*VSIQTG Trigger: ACCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCG...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | TCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCGGATTTAGCCACAACTaGCAGAGGTGCCACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SVSFPVFCSRTEFLPSPFGFSHN*QRCHLE Trigger: TTCCAAGTGGCACCTCTGTCAGTTGTGGCTAAATCC...GAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR TCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACATTGCAGTGGTTATCTaGATGGTGCTCACAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHIAVVI*MVLTIP Trigger: TGGGATTGTGAGCACCATTCAGATAACCACTGCAAT...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGTGACCCGTTCCTATaGACATACCAACACACCAAA | + |
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Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHSDPFL*TYQHTK Trigger: TTTGGTGTGTTGGTATGTGCATAGGAACGGGTCACT...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR GCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAAGTGACCCGTTCCTATaGACATACCAACACACCAAA | + |
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Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKSDPFL*TYQHTK Trigger: TTTGGTGTGTTGGTATGTGCATAGGAACGGGTCACT...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAGACAGAGGTGCCACTTaGAAGAACAGCCCAATTTTA | + |
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Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKDRGAT*KNSPIL Trigger: TAAAATTGGGCTGTTCTTCCAAGTGGCACCTCTGTC...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAACCTTTTCTGGGGCTTaGCACATGAGCCCACGCACA | + |
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Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILTFSGA*HMSPRT Trigger: TGTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGT...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTCAGGATATGCTGTGTTaGGTATTGCAGTGGTTATCT | + |
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Preference number: 4 (lower is better) Translates to: IHVALDQGTYKTGQRAYSQDMLC*VLQWLS Trigger: AGATAACCACTGCAATACCCAACACAGCATATCCTG...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTATTTGGTCACAGGAGCTaGCCACTGTCCTTGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILFGHRS*PLSLSR Trigger: CCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAA...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAAGTCTCCAGGATATGTaGATTGTGTCAGGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YQSEKRPVLILQGSHVNASLQDM*IVSGVT Trigger: TGTCACCCCTGACACAATCCACATATCCTGGAGACT...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCATCCCCACTACATCAACCGCAGCAGCAACCTGAAATCTGAAACTTTTTATAGATCCAAAGGCTaGGCTATGGCCCAGTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRHPHYINRSSNLKSETFYRSKG*AMAQFK Trigger: CTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATA...AAAAGTTTCAGATTTCAGGTTGCTGCTGCGGTTGATGTAGTGGGGATGCCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAATTGCAGTGGTTATCTaGATGGTGCTCACAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQSEKRPVLILQGSHVNAIAVVI*MVLTIP Trigger: TGGGATTGTGAGCACCATTCAGATAACCACTGCAAT...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAACCACAGCCCCACCAATaGTGGCAGCCAAAGGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKPQPHQ*WQPKVN Trigger: ATTTACCTTTGGCTGCCATCATTGGTGGGGCTGTGG...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | ACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAATTGGTTATCTGAATGGTaGTCACAATCCCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTRVSCERSPDCSTQRENWLSEW*SQSHCL Trigger: AAGACAGTGGGATTGTGAGCACCATTCAGATAACCA...ATTTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCATCCCCACTACATCAACCGCAGCAGCAACCTGAAATCTGAAACTTTTTGCTGTGTTGGGTATTaGAGTGGTTATCTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRHPHYINRSSNLKSETFCCVGY*SGYLNG Trigger: ACCATTCAGATAACCACTGCAATACCCAACACAGCA...AAAAGTTTCAGATTTCAGGTTGCTGCTGCGGTTGATGTAGTGGGGATGCCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGTTTCCATGGGAACCATaGATACTCTATAGGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AYTTRVSCERSPDCSTQRFPWEP*ILYRVI Trigger: AATCACCCTATAGAGTATGCATGGTTCCCATGGAAA...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTGGGATTGTGCTAAGGTaGTTACGGGACAGAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLGIVLR*LRDRKS Trigger: GCTTTTTCTGTCCCGTAACCACCTTAGCACAATCCC...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACTGTTGGGTATTGCAGTaGTTATCTGAATGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHCWVLQ*LSEWCS Trigger: TGAGCACCATTCAGATAACCACTGCAATACCCAACA...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACCAGGATATGCTGTGTTaGGTATTGCAGTGGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHQDMLC*VLQWLS Trigger: AGATAACCACTGCAATACCCAACACAGCATATCCTG...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCATCCCCACTACATCAACCGCAGCAGCAACCTGAAATCTGAAACTTTTGGGGTTTTTAATATCTaGTTGTTTGGTCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRHPHYINRSSNLKSETFGVFNI*LFGHRS Trigger: GCTCCTGTGACCAAACAACCAGATATTAAAAACCCC...AAAAGTTTCAGATTTCAGGTTGCTGCTGCGGTTGATGTAGTGGGGATGCCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCAGTCTCCAGGATATGTaGATTGTGTCAGGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SVSFPVFCSRTEFLPSPFSLQDM*IVSGVT Trigger: TGTCACCCCTGACACAATCCACATATCCTGGAGACT...GAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAGGTTACTGGTTTCCATaGGAACCATGCATACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKGYWFP*EPCILY Trigger: ATAGAGTATGCATGGTTCCCATGGAAACCAGTAACC...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | ACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAATGCAAATGTAACTCTTTaGCATACTTTGGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTRVSCERSPDCSTQRENANVTL*HTLEGW Trigger: CCAACCTTCCAAAGTATGTCAAAGAGTTACATTTGC...ATTTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTGGAAAGAAGTTTCCCTaGTTTCCAGGATGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLGKKFP*FPGWSC Trigger: ACAACTCCATCCTGGAAATCAGGGAAACTTCTTTCC...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAACTCTTTGACATACTTTaGAAGGTTGGTAGGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKLFDIL*KVGREF Trigger: GAATTCCCTACCAACCTTCCAAAGTATGTCAAAGAG...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAAATATAAGAAAAAGCATTTaGGGGTACCCGGTTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: TTRVSCERSPDCSTQRENIRKSI*GYPVDM Trigger: CATATCAACCGGGTACCCCCAAATGCTTTTTCTTAT...ATTTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCACGAAGTCCTTTATTCTTGAAGCTCTGCTGACGGTGGCTTCGACAGCTTTGCGAAGAATCAGTTaGGTTATATTGTCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLTKSFILEALLTVASTALRRIS*VILSKS Trigger: TGATTTGGACAATATAACCCAACTGATTCTTCGCAA...AGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAGAATAAAGGACTTCGTGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTACAGGTAAAGGTTACTaGTTTCCATGGGAACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLTGKGY*FPWEPC Trigger: GCATGGTTCCCATGGAAACCAGTAACCTTTACCTGT...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTCGAAGAGGGGCAGTTTaGGTCTCAATACAAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSRRGAV*VSIQTG Trigger: ACCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCG...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAACTTATCGGTAGCATCTaGAAAGAAGTTTCCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKLIGSI*KEVSLI Trigger: AATCAGGGAAACTTCTTTCCAGATGCTACCGATAAG...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCACTCCTCCTTGGAGATaGGTTCATTGCTTATCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVSFPVFCSRTEFLPSPFTPPWR*VHCLSV Trigger: TACCGATAAGCAATGAACCCATCTCCAAGGAGGAGT...GAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | GTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCTTACAAACTCCTCCTTaGAGATGGGTTCATTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLILQGSHVNAVLIVQHSLQTPP*RWVHCL Trigger: TAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAA...GCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | ATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGAAATTACAAACTCCTCCTTaGAGATGGGTTCATTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILQGSHVNAVLIVQHSGKLQTPP*RWVHCL Trigger: TAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAA...TTTCCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCATCCCCACTACATCAACCGCAGCAGCAACCTGAAATCTGAAACTTTTAATACCAAGGATTGTTaGGAAGAATCAGTTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FRHPHYINRSSNLKSETFNTKDC*EESVGL Trigger: TAACCCAACTGATTCTTCGCAACAATCCTTGGTATT...AAAAGTTTCAGATTTCAGGTTGCTGCTGCGGTTGATGTAGTGGGGATGCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTACAATCAAACAGTTCTaGACTGAGGTCCTTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLTIKQF*TEVLDS Trigger: GCTATCAAGGACCTCAGTGCAGAACTGTTTGATTGT...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTGGTTATCTGAATGGTaGTCACAATCCCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLWLSEW*SQSHCL Trigger: AAGACAGTGGGATTGTGAGCACCATTCAGATAACCA...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGATCCTTGAGCAGGATATaGTGTGTTGGGTATTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TILCVEFNFFKSLDDPGRSLSRI*CVGYCS Trigger: ACTGCAATACCCAACACAGCATATCCTGCTCAAGGA...TCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGAATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTCTTAGTACCGGCTTCTaGATAGTCATCCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSLSTGF*IVILSP Trigger: AGGAGAAAGGATGACTATGCAGAAGCCGGTACTAAG...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTATGGAGATGGGTTCATTaGTTATCGGTAGCATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLWRWVH*LSVASG Trigger: TCCAGATGCTACCGATAAGCAATGAACCCATCTCCA...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | GTCGAATTTCAAAAGCTGAATACATGTAGCGTTGGATCAAGGCACATACAAGACACAGCGACATACAGATaGACAGGATTTAGCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VEFQKLNTCSVGSRHIQDTATYR*TGFSHN Trigger: GTTGTGGCTAAATCCTGTCCATCTGTATGTCGCTGT...GTCTTGTATGTGCCTTGATCCAACGCTACATGTATTCAGCTTTTGAAATTCGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAGGGATTGTGCTAAGGTaGTTACGGGACAGAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILGIVLR*LRDRKS Trigger: GCTTTTTCTGTCCCGTAACCACCTTAGCACAATCCC...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAAACCAAGATTATAGATCCAAAGGCTaGGCTATGGCCCAGTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVEFNFFKSLDDPGRNQDYRSKG*AMAQFK Trigger: CTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATA...ATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCATTCGGAGGAAATATaGTGTGTATTACAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSEKRPVLILQGSHVNAVHSEEI*CVLQTP Trigger: AGGAGTTTGTAATACACACCATATTTCCTCCGAATG...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | TCTACTTTTAGTGATGGTAACATAGTCCCGAAAGCAAGCACAATTATTCTGTTTAGGCTTGTGAGACCATaGAGTGATGGGGAAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: STFSDGNIVPKASTIILFRLVRP*SDGEEI Trigger: GATCTCTTCCCCATCACTTCATGGTCTCACAAGCCT...AAACAGAATAATTGTGCTTGCTTTCGGGACTATGTTACCATCACTAAAAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GTCGAATTTCAAAAGCTGAATACATGTAGCGTTGGATCAAGGCACATACAAGACACAATCAAACAGTTCTaGACTGAGGTCCTTGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VEFQKLNTCSVGSRHIQDTIKQF*TEVLDS Trigger: GCTATCAAGGACCTCAGTGCAGAACTGTTTGATTGT...GTCTTGTATGTGCCTTGATCCAACGCTACATGTATTCAGCTTTTGAAATTCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTATCCTTGAGCAGGATATaGTGTGTTGGGTATTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILSLSRI*CVGYCS Trigger: ACTGCAATACCCAACACAGCATATCCTGCTCAAGGA...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAACTTAGTACCGGCTTCTaGATAGTCATCCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKLSTGF*IVILSP Trigger: AGGAGAAAGGATGACTATGCAGAAGCCGGTACTAAG...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAACAGCGACATACAGATaGACAGGATTTAGCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILTATYR*TGFSHN Trigger: GTTGTGGCTAAATCCTGTCCATCTGTATGTCGCTGT...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTGTCACCCAAACCATaGTTGTTCAACAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSFPVFCSRTEFLPSPFLSPKP*LFNKFP Trigger: TGGAAACTTGTTGAACAACCATGGTTTGGGTGACAA...GAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACTTGCGAAGAATCAGTTaGGTTATATTGTCCAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLILQGSHVNAVLIVQHLRRIS*VILSKS Trigger: TGATTTGGACAATATAACCCAACTGATTCTTCGCAA...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGATGTTGGGTATTGCAGTaGTTATCTGAATGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TILCVEFNFFKSLDDPGRCWVLQ*LSEWCS Trigger: TGAGCACCATTCAGATAACCACTGCAATACCCAACA...TCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTGGTTACTGGTTTCCATaGGAACCATGCATACTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSGYWFP*EPCILY Trigger: ATAGAGTATGCATGGTTCCCATGGAAACCAGTAACC...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAAACAGGTAAAGGTTACTaGTTTCCATGGGAACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKTGKGY*FPWEPC Trigger: GCATGGTTCCCATGGAAACCAGTAACCTTTACCTGT...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAGCAAATGTAACTCTTTaGCATACTTTGGAAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TILCVEFNFFKSLDDPGRANVTL*HTLEGW Trigger: CCAACCTTCCAAAGTATGTCAAAGAGTTACATTTGC...TCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGAATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTCGGAATTTTCGAAAGTaGATCATAGGTGATAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSRNFRK*IIGDSP Trigger: AGGACTATCACCTATGATTCACTTTCGAAAATTCCG...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTGTACCCATTTCATCTTaGATCCACAATACCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSVPISS*IHNTKD Trigger: ATCCTTGGTATTGTGGATGCAAGATGAAATGGGTAC...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAAGGGGTTTTTAATATCTaGTTGTTTGGTCACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKGVFNI*LFGHRS Trigger: GCTCCTGTGACCAAACAACCAGATATTAAAAACCCC...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CCA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTCTTATCGGTAGCATCTaGAAAGAAGTTTCCCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VQHSGKIHFHSQQVILLSLIGSI*KEVSLI Trigger: AATCAGGGAAACTTCTTTCCAGATGCTACCGATAAG...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | ATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCTTTCCATGGGAACCATaGATACTCTATAGGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: IVQHSGKIHFHSQQVILLFPWEP*ILYRVI Trigger: AATCACCCTATAGAGTATGCATGGTTCCCATGGAAA...GAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCTTTGACATACTTTaGAAGGTTGGTAGGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILLFDIL*KVGREF Trigger: GAATTCCCTACCAACCTTCCAAAGTATGTCAAAGAG...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCTTGTCACCCAAACCATaGTTGTTCAACAAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVQHSGKIHFHSQQVILLLSPKP*LFNKFP Trigger: TGGAAACTTGTTGAACAACCATGGTTTGGGTGACAA...GAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | ATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCATAAGAAAAAGCATTTaGGGGTACCCGGTTGATATG | + |
|
Preference number: 4 (lower is better) Translates to: IVQHSGKIHFHSQQVILLIRKSI*GYPVDM Trigger: CATATCAACCGGGTACCCCCAAATGCTTTTTCTTAT...GAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR GCA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAAATACCAAGGATTGTTaGGAAGAATCAGTTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVQHSGKIHFHSQQVILNTKDC*EESVGL Trigger: TAACCCAACTGATTCTTCGCAACAATCCTTGGTATT...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CCA 90 bp | TCTACTTTTAGTGATGGTAACATAGTCCCGAAAGCAAGCACAATTATTCTGTTTCATTCGGAGGAAATATaGTGTGTATTACAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STFSDGNIVPKASTIILFHSEEI*CVLQTP Trigger: AGGAGTTTGTAATACACACCATATTTCCTCCGAATG...AAACAGAATAATTGTGCTTGCTTTCGGGACTATGTTACCATCACTAAAAGTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS CCA 90 bp | GCACTGAGGTCCTTGATAGCCATTCCACGGACCTTTTCTGGGGCTTaGCACATGAGCCCACGCACATTGACCTTCACCGGTAGCGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALRSLIAIPRTFSGA*HMSPRTLTFTGSDC Trigger: ACAGTCGCTACCGGTGAAGGTCAATGTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGTCCGTGGAATGGCTATCAAGGACCTCAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | AGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTGCACTTTGAGGGTGGTTGTGGGGTaGTACATTCGAAGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVGSRHIQDWPKGVQCTLRVVVG*YIRRGA Trigger: TGCCCCTCTTCGAATGTACAACCCCACAACCACCCT...CAAAGTGCACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | GTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGACCTTTTCTGGGGCTaGGCACATGAGCCCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLILQGSHVNAVLIVQHSDLFWG*AHEPTH Trigger: GTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGTC...GCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 90 bp | GCCTGCGTCACAGCGACATACAGATGGACAGGATTTAGCCACAACTaGCAGAGGTGCCACTTGGAAGAACAGCCCAATTTTAGTCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ACVTATYRWTGFSHN*QRCHLEEQPNFSPD Trigger: ATCGGGACTAAAATTGGGCTGTTCTTCCAAGTGGCACCTCTGTCAGTTGTGGCTAAATCCTGTCCATCTGTATGTCGCTGTGACGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | CATACAGATGGACAGGATTTAGCCACAACTGACAGAGGTGCCACTTaGAAGAACAGCCCAATTTTAGTCCCGATGAGGAAGAGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HTDGQDLATTDRGAT*KNSPILVPMRKRLQ Trigger: CTGGAGCCTCTTCCTCATCGGGACTAAAATTGGGCTGTTCTTCCAAGTGGCACCTCTGTCAGTTGTGGCTAAATCCTGTCCATCTGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCAAAGCTTCCTCAGGCTaGTGCCGGGAAGGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QSEKRPVLILQGSHVNAVKASSG*CREGSL Trigger: CAGTGAACCTTCCCGGCACAAGCCTGAGGAAGCTTT...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTAGCTGGCCACTGTCCTaGAGCAGGATATGCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IHVALDQGTYKTGQRAYSSWPLS*SRICCV Trigger: AACACAGCATATCCTGCTCAAGGACAGTGGCCAGCT...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS TCA 90 bp | CTGGGATGCCACTGTCTCTGTAGCTCCGGTTACTACTGCTCTCACTaGGGTTGTTCTTGTACAGATTCATCCCATTCGGAGGAAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGCHCLCSSGYYCSH*GCSCTDSSHSEEIW Trigger: CCATATTTCCTCCGAATGGGATGAATCTGTACAAGAACAACCTCAGTGAGAGCAGTAGTAACCGGAGCTACAGAGACAGTGGCATCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 90 bp | CTGAATGGTGCTCACAATCCCACTGTCTTTACAATCAAACAGTTCTaGACTGAGGTCCTTGATAGCCATTCCACGGACCTTTTCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNGAHNPTVFTIKQF*TEVLDSHSTDLFWG Trigger: GCCCCAGAAAAGGTCCGTGGAATGGCTATCAAGGACCTCAGTGCAGAACTGTTTGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 90 bp | TGGTTGTTTGGTCACAGGAGCTGGCCACTGTCCTTGAGCAGGATATaGTGTGTTGGGTATTGCAGTGGTTATCTGAATGGTGCTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: WLFGHRSWPLSLSRI*CVGYCSGYLNGAHN Trigger: ATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | TCTCCTGTTACGATTGTTTCTGTTATAGATCCAAAGGCTGGGCTATaGCCCAGTTTAAGCCAGCTGAGTCGCAGAGCAGTCATAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPVTIVSVIDPKAGL*PSLSQLSRRAVIGR Trigger: TCTGCCTATGACTGCTCTGCGACTCAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATAACAGAAACAATCGTAACAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | ACTGCGTTCTCCTGTTACGATTGTTTCTGTTATAGATCCAAAGGCTaGGCTATGGCCCAGTTTAAGCCAGCTGAGTCGCAGAGCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAFSCYDCFCYRSKG*AMAQFKPAESQSSH Trigger: ATGACTGCTCTGCGACTCAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATAACAGAAACAATCGTAACAGGAGAACGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTATGAGCCCACGCACATaGACCTTCACCGGTAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLMSPRT*TFTGSD Trigger: GTCGCTACCGGTGAAGGTCAATGTGCGTGGGCTCAT...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCAGCTGGCCACTGTCCTaGAGCAGGATATGCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QSEKRPVLILQGSHVNAVSWPLS*SRICCV Trigger: AACACAGCATATCCTGCTCAAGGACAGTGGCCAGCT...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | CTTCTCACGAAGTCCTTTATTCTTGAAGCTCTGCTGACGGTGGCTTCGACAGCTTTGGAGATGGGTTCATaGCTTATCGGTAGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTKSFILEALLTVASTALEMGS*LIGSIW Trigger: CCAGATGCTACCGATAAGCAATGAACCCATCTCCAA...AGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAGAATAAAGGACTTCGTGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS CCA 90 bp | GTTGTTCTGAAGGTAGAGTGTTGTAGCATCCTCCGGAATTCCCACTaGAATGGATGTCAGAGAGCGATCGTTACAGTAAATGAAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVLKVECCSILRNSH*NGCQRAIVTVNEAC Trigger: GCAGGCTTCATTTACTGTAACGATCGCTCTCTGACATCCATTCCAGTGGGAATTCCGGAGGATGCTACAACACTCTACCTTCAGAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | GCCTGTAGTTCGCTGATCCTTAATGAGCTTGGGGTTTTTAATATCTaGTTGTTTGGTCACAGGAGCTGGCCACTGTCCTTGAGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ACSSLILNELGVFNI*LFGHRSWPLSLSRI Trigger: TATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCAGATATTAAAAACCCCAAGCTCATTAAGGATCAGCGAACTACAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | CTTCTCACGAAGTCCTTTATTCTTGAAGCTCTGCTGACGGTGGCTTCGACAGCTCCACAATACCAAGGATaGTTGCGAAGAATCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTKSFILEALLTVASTAPQYQG*LRRISW Trigger: CCAACTGATTCTTCGCAACAATCCTTGGTATTGTGG...AGCTGTCGAAGCCACCGTCAGCAGAGCTTCAAGAATAAAGGACTTCGTGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | CAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCTCGAAGAGGGGCAGTTaGGGTCTCAATACAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSEKRPVLILQGSHVNAVSKRGS*GLNTNR Trigger: CCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCGA...GACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTAGGGTGGTTGTGGGGTaGTACATTCGAAGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLRVVVG*YIRRGA Trigger: TGCCCCTCTTCGAATGTACAACCCCACAACCACCCT...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 90 bp | GATACAGCTGCCTTAAATAAGAAAAAGCATTTGGGGGTACCCGGTTaGTATGGTTGTCTTGAAGGTAAAGCTTCCTCAGGCTTGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTAALNKKKHLGVPG*YGCLEGKASSGLCR Trigger: CCGGCACAAGCCTGAGGAAGCTTTACCTTCAAGACAACCATATCAACCGGGTACCCCCAAATGCTTTTTCTTATTTAAGGCAGCTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 90 bp | CCTTCACCGGTAGCGACTGTAACCAGTCTCGTACCCATTTCATCTTaGATCCACAATACCAAGGATTGTTGCGAAGAATCAGTTGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSPVATVTSLVPISS*IHNTKDCCEESVGL Trigger: TAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACGAGACTGGTTACAGTCGCTACCGGTGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | CTGGCCACTGTCCTTGAGCAGGATATGCTGTGTTGGGTATTGCAGTaGTTATCTGAATGGTGCTCACAATCCCACTGTCTTTACAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LATVLEQDMLCWVLQ*LSEWCSQSHCLYNQ Trigger: TTGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 90 bp | AATGAGCTTGGGGTTTTTAATATCTGGTTGTTTGGTCACAGGAGCTaGCCACTGTCCTTGAGCAGGATATGCTGTGTTGGGTATTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NELGVFNIWLFGHRS*PLSLSRICCVGYCS Trigger: ACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCAGATATTAAAAACCCCAAGCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTAAAAGCTTCCTCAGGCTaGTGCCGGGAAGGTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLKASSG*CREGSL Trigger: CAGTGAACCTTCCCGGCACAAGCCTGAGGAAGCTTT...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTCTGCTCTCACTGAGGTaGTTCTTGTACAGATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IHVALDQGTYKTGQRAYSLLSLR*FLYRFI Trigger: GATGAATCTGTACAAGAACAACCTCAGTGAGAGCAG...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS TCA 90 bp | AACAAGTTTCCATCTAAAACCAGGCGTTTCAGGCTTGTGAGACCATaGAGTGATGGGGAAGAGATCGTTGATATGCGATTGTCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKFPSKTRRFRLVRP*SDGEEIVDMRLSSR Trigger: CCTGGATGACAATCGCATATCAACGATCTCTTCCCCATCACTTCATGGTCTCACAAGCCTGAAACGCCTGGTTTTAGATGGAAACTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TCTACTTTTAGTGATGGTAACATAGTCCCGAAAGCAAGCACAATTATTCTGTTTGACCTTTTCTGGGGCTaGGCACATGAGCCCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STFSDGNIVPKASTIILFDLFWG*AHEPTH Trigger: GTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGTC...AAACAGAATAATTGTGCTTGCTTTCGGGACTATGTTACCATCACTAAAAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCATTAATATCTGGTTGTTaGGTCACAGGAGCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YQSEKRPVLILQGSHVNALISGC*VTGAGH Trigger: GTGGCCAGCTCCTGTGACCAAACAACCAGATATTAA...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | ATACATGTAGCGTTGGATCAAGGCACATACAAGACTGGCCAAAGGGCGTACAGTATTACAAACTCCTCCTaGGAGATGGGTTCATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHVALDQGTYKTGQRAYSITNSS*EMGSLL Trigger: AAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAAT...ACTGTACGCCCTTTGGCCAGTCTTGTATGTGCCTTGATCCAACGCTACATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS TCA 90 bp | GGTTGTTCAACAAGTTTCCATCTAAAACCAGGCGTTTCAGGCTTGTaGGACCATGAAGTGATGGGGAAGAGATCGTTGATATGCGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCSTSFHLKPGVSGL*DHEVMGKRSLICDC Trigger: ACAATCGCATATCAACGATCTCTTCCCCATCACTTCATGGTCTCACAAGCCTGAAACGCCTGGTTTTAGATGGAAACTTGTTGAACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | CTTGAGCAGGATATGCTGTGTTGGGTATTGCAGTGGTTATCTGAATaGTGCTCACAATCCCACTGTCTTTACAATCAAACAGTTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEQDMLCWVLQWLSE*CSQSHCLYNQTVLH Trigger: GTGCAGAACTGTTTGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | CTGAGTCGCAGAGCAGTCATAGGCAGAGCAAGTCTCCAGGATATGTaGATTGTGTCAGGGGTGACAGATTTCACAGTAATTAAAATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSRRAVIGRASLQDM*IVSGVTDFTVIKIV Trigger: AACAATTTTAATTACTGTGAAATCTGTCACCCCTGACACAATCCACATATCCTGGAGACTTGCTCTGCCTATGACTGCTCTGCGACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGGTTGCGAAGAATCAGTaGGGTTATATTGTCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: AYTTRVSCERSPDCSTQRVAKNQ*GYIVQI Trigger: GATTTGGACAATATAACCCAACTGATTCTTCGCAAC...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCATCCCCACTACATCAACCGCAGCAGCAACCTGAAATCTGAAACTTTTGTTTTTAATATCTGGTaGTTTGGTCACAGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRHPHYINRSSNLKSETFVFNIW*FGHRSW Trigger: CCAGCTCCTGTGACCAAACAACCAGATATTAAAAAC...AAAAGTTTCAGATTTCAGGTTGCTGCTGCGGTTGATGTAGTGGGGATGCCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTTGGAGATGGGTTCATaGCTTATCGGTAGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLLEMGS*LIGSIW Trigger: CCAGATGCTACCGATAAGCAATGAACCCATCTCCAA...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACATTACAAACTCCTCCTaGGAGATGGGTTCATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVLILQGSHVNAVLIVQHITNSS*EMGSLL Trigger: AAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAAT...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCACTGCTCTCACTGAGGTaGTTCTTGTACAGATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: YQSEKRPVLILQGSHVNALLSLR*FLYRFI Trigger: GATGAATCTGTACAAGAACAACCTCAGTGAGAGCAG...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAGCGGTGCAAATGTAACTCTTaGACATACTTTGGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AYTTRVSCERSPDCSTQRCKCNS*TYFGRL Trigger: CAACCTTCCAAAGTATGTCAAAGAGTTACATTTGCA...CCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTGCTTATACTACAAGGGTCTCATGTGAACGCAGTCCTGATTGTTCAACACAAGTTGAAGAAAACTTaGTCACCCAAACCATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVLILQGSHVNAVLIVQHKLKKT*SPKPWL Trigger: CAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTT...GTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TACCAAAGTGAAAAACGGCCTGTGCTTATACTACAAGGGTCTCATGTGAACGCACAATACCAAGGATTGTaGCGAAGAATCAGTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YQSEKRPVLILQGSHVNAQYQGL*RRISWV Trigger: AACCCAACTGATTCTTCGCAACAATCCTTGGTATTG...TGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGTTTTTCACTTTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAAACCAAGATTTAATATCTGGTTGTTaGGTCACAGGAGCTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CVEFNFFKSLDDPGRNQDLISGC*VTGAGH Trigger: GTGGCCAGCTCCTGTGACCAAACAACCAGATATTAA...ATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTAGTAAGGTTCTTTCTCTaGCTCTCGATTGAGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLVRFFL*LSIEGG Trigger: ACCACCCTCAATCGAGAGCAAGAGAAAGAACCTTAC...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | GGGTCTCAATACAAACAGGTGTTTCATCAAACAGGTAAAGGTTACTaGTTTCCATGGGAACCATGCATACTCTATAGGGTGATTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSQYKQVFHQTGKGY*FPWEPCILYRVIQV Trigger: AACCTGAATCACCCTATAGAGTATGCATGGTTCCCATGGAAACCAGTAACCTTTACCTGTTTGATGAAACACCTGTTTGTATTGAGACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | TCATCCCATTCGGAGGAAATATGGTGTGTATTACAAACTCCTCCTTaGAGATGGGTTCATTGCTTATCGGTAGCATCTGGAAAGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSHSEEIWCVLQTPP*RWVHCLSVASGKKF Trigger: AAACTTCTTTCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACACCATATTTCCTCCGAATGGGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTAATGGGGAAGAGATCGTaGATATGCGATTGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLMGKRS*ICDCHP Trigger: TGGATGACAATCGCATATCAACGATCTCTTCCCCAT...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAGTAAGGTTCTTTCTCTaGCTCTCGATTGAGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIVQHSGKIHFHSQQVILVRFFL*LSIEGG Trigger: ACCACCCTCAATCGAGAGCAAGAGAAAGAACCTTAC...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCACTGAGGTTGTTCTaGTACAGATTCATCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SQSLFQCFAVEQSSYHHLSLRLF*YRFIPF Trigger: GAATGGGATGAATCTGTACAAGAACAACCTCAGTGA...AAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAAATGGGGAAGAGATCGTaGATATGCGATTGTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKMGKRS*ICDCHP Trigger: TGGATGACAATCGCATATCAACGATCTCTTCCCCAT...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | ACAATTCTGTGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAGTTGATATGGTTGTCTaGAAGGTAAAGCTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TILCVEFNFFKSLDDPGRVDMVV*KVKLPQ Trigger: CTGAGGAAGCTTTACCTTCAAGACAACCATATCAAC...TCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACACAGAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TCAGTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCGTTGCGAAGAATCAGTaGGGTTATATTGTCCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SVSFPVFCSRTEFLPSPFVAKNQ*GYIVQI Trigger: GATTTGGACAATATAACCCAACTGATTCTTCGCAAC...GAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCCCACAATACCAAGGATaGTTGCGAAGAATCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IVQHSGKIHFHSQQVILLPQYQG*LRRISW Trigger: CCAACTGATTCTTCGCAACAATCCTTGGTATTGTGG...GAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTAGAATTCAACTTTTTCAAGAGCCTGGATGATCCAGGCAGAAACCAAGATGTTTTTAATATCTGGTaGTTTGGTCACAGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CVEFNFFKSLDDPGRNQDVFNIW*FGHRSW Trigger: CCAGCTCCTGTGACCAAACAACCAGATATTAAAAAC...ATCTTGGTTTCTGCCTGGATCATCCAGGCTCTTGAAAAAGTTGAATTCTACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GTCGAATTTCAAAAGCTGAATACATGTAGCGTTGGATCAAGGCACATACAAGACTCACTGAGGTTGTTCTaGTACAGATTCATCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VEFQKLNTCSVGSRHIQDSLRLF*YRFIPF Trigger: GAATGGGATGAATCTGTACAAGAACAACCTCAGTGA...GTCTTGTATGTGCCTTGATCCAACGCTACATGTATTCAGCTTTTGAAATTCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110057.3 |
||
| CDS TCA 90 bp | TCAAGGAATTCCTCACCAGGGACAGCTCTGTTAAGTTTACTAAGTTaGAGAAAACTTTGTCACCCAAACCATGGTTGTTCAACAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRNSSPGTALLSLLS*RKLCHPNHGCSTSF Trigger: GAAACTTGTTGAACAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTTAGTAAACTTAACAGAGCTGTCCCTGGTGAGGAATTCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTAGAACACAAAGTTGATATGGTTGTCTaGAAGGTAAAGCTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGKFTFTVNKSSYSVEHKVDMVV*KVKLPQ Trigger: CTGAGGAAGCTTTACCTTCAAGACAACCATATCAAC...TTTGTGTTCTACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | ATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCCAATACCAAGGATTGTaGCGAAGAATCAGTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IVQHSGKIHFHSQQVILLQYQGL*RRISWV Trigger: AACCCAACTGATTCTTCGCAACAATCCTTGGTATTG...GAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 90 bp | AGTCTCGTACCCATTTCATCTTGCATCCACAATACCAAGGATTGTTaGGAAGAATCAGTTGGGTTATATTGTCCAAATCATCAAAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SLVPISSCIHNTKDC*EESVGLYCPNHQRY Trigger: GTATCTTTGATGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACGAGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | GTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTACTCAGTACATACTTTGGAAGGTaGGTAGGGAATTCATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: VQHSGKIHFHSQQVILLSTYFGR*VGNSSK Trigger: TTTAGATGAATTCCCTACCAACCTTCCAAAGTATGT...ACTGAGTAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS-3UTR CAA 90 bp | GTCTCTTTTCCAGTGTTTTGCAGTAGAACAGAGTTCCTACCATCACCTTTCTTATGCAAATGTAACTCTTaGACATACTTTGGAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSFPVFCSRTEFLPSPFLCKCNS*TYFGRL Trigger: CAACCTTCCAAAGTATGTCAAAGAGTTACATTTGCA...TAAGAAAGGTGATGGTAGGAACTCTGTTCTACTGCAAAACACTGGAAAAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS-3UTR CAA 90 bp | CTGATTGTTCAACACAGCGGGAAAATTCACTTTCACAGTCAACAAGTCATCTTAAAGTTGAAGAAAACTTaGTCACCCAAACCATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIVQHSGKIHFHSQQVILKLKKT*SPKPWL Trigger: CAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTT...TAAGATGACTTGTTGACTGTGAAAGTGAATTTTCCCGCTGTGTTGAACAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | TCTGTTAAGTTTACTAAGTTGAAGAAAACTTTGTCACCCAAACCATaGTTGTTCAACAAGTTTCCATCTAAAACCAGGCGTTTCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVKFTKLKKTLSPKP*LFNKFPSKTRRFRL Trigger: AAGCCTGAAACGCCTGGTTTTAGATGGAAACTTGTTGAACAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTTAGTAAACTTAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 90 bp | CGAAGAATCAGTTGGGTTATATTGTCCAAATCATCAAAGATACCCTaGGGTAAATTGCTTAGGTTATTATTAGACATATCGAGTCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RRISWVILSKSSKIP*GKLLRLLLDISSRY Trigger: GTATCGACTCGATATGTCTAATAATAACCTAAGCAATTTACCTCAGGGTATCTTTGATGATTTGGACAATATAACCCAACTGATTCTTCG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 90 bp | TTGACATACTTTGGAAGGTTGGTAGGGAATTCATCTAAACTGTTGTaGTATAGGTATATTCTTTGTACTTTCAGCAAGTTCTTCAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: LTYFGRLVGNSSKLL*YRYILCTFSKFFKS Trigger: CGATTTGAAGAACTTGCTGAAAGTACAAAGAATATACCTATACCACAACAGTTTAGATGAATTCCCTACCAACCTTCCAAAGTATGTCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | CTTCCTCAGGCTTGTGCCGGGAAGGTTCACTGGCGCTaGTGTCAAGGAATTCCTCACCAGGGACAGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPQACAGKVHWR*CQGIPHQGQLC Trigger: ACAGAGCTGTCCCTGGTGAGGAATTCCTTGACAGCAGCGCCAGTGAACCTTCCCGGCACAAGCCTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 72 bp | GTAAAGCTTCCTCAGGCTTGTGCCGGGAAGGTTCACTaGCGCTGCTGTCAAGGAATTCCTCACCAGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VKLPQACAGKVH*RCCQGIPHQGQ Trigger: CTGTCCCTGGTGAGGAATTCCTTGACAGCAGCGCCAGTGAACCTTCCCGGCACAAGCCTGAGGAAGCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 72 bp | TCCTTGATAGCCATTCCACGGACCTTTTCTGGGGCTTaGCACATGAGCCCACGCACATTGACCTTCACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLIAIPRTFSGA*HMSPRTLTFTG Trigger: ACCGGTGAAGGTCAATGTGCGTGGGCTCATGTGCCAAGCCCCAGAAAAGGTCCGTGGAATGGCTATCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | CGGCTTCTGCATAGTCATCCTTTCTCCTCCGCCCTTTaGTGTACGCACAGTTCCGTGAAAACAGTGACCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLLHSHPFSSAL*CTHSSVKTVTR Trigger: ACGGGTCACTGTTTTCACGGAACTGTGCGTACAGCAAAGGGCGGAGGAGAAAGGATGACTATGCAGAAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS TCA 72 bp | GGAGGGCGATGCTTACCAGGGCCACAGCCCCACCAATaGTGGCAGCCAAAGGTAAATTTGGATTTTTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGRCLPGPQPHQ*WQPKVNLDFCK Trigger: CTTACAAAAATCCAAATTTACCTTTGGCTGCCATCATTGGTGGGGCTGTGGCCCTGGTAAGCATCGCCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | TATGGTTGTCTTGAAGGTAAAGCTTCCTCAGGCTTGTaGCGGGAAGGTTCACTGGCGCTGCTGTCAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: YGCLEGKASSGL*REGSLALLSRN Trigger: ATTCCTTGACAGCAGCGCCAGTGAACCTTCCCGGCACAAGCCTGAGGAAGCTTTACCTTCAAGACAACCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | GGTCACAGGAGCTGGCCACTGTCCTTGAGCAGGATATaGTGTGTTGGGTATTGCAGTGGTTATCTGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GHRSWPLSLSRI*CVGYCSGYLNG Trigger: ACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 72 bp | GGGGTTTTTAATATCTGGTTGTTTGGTCACAGGAGCTaGCCACTGTCCTTGAGCAGGATATGCTGTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVFNIWLFGHRS*PLSLSRICCVG Trigger: CCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCAGATATTAAAAACCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CCA 72 bp | ACGATTGTTTCTGTTATAGATCCAAAGGCTGGGCTATaGCCCAGTTTAAGCCAGCTGAGTCGCAGAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TIVSVIDPKAGL*PSLSQLSRRAV Trigger: GACTGCTCTGCGACTCAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATAACAGAAACAATCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS CAA 72 bp | AAAAGCATTTGGGGGTACCCGGTTGATATGGTTGTCTaGAAGGTAAAGCTTCCTCAGGCTTGTGCCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSIWGYPVDMVV*KVKLPQACAGK Trigger: CTTCCCGGCACAAGCCTGAGGAAGCTTTACCTTCAAGACAACCATATCAACCGGGTACCCCCAAATGCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS TCA 72 bp | CACTGTCTCTGTAGCTCCGGTTACTACTGCTCTCACTaGGGTTGTTCTTGTACAGATTCATCCCATTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HCLCSSGYYCSH*GCSCTDSSHSE Trigger: CTCCGAATGGGATGAATCTGTACAAGAACAACCTCAGTGAGAGCAGTAGTAACCGGAGCTACAGAGACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | GGATGTCAGAGAGCGATCGTTACAGTAAATGAAGCCTaGGTCACAGCGACATACAGATGGACAGGATTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCQRAIVTVNEA*VTATYRWTGFS Trigger: GCTAAATCCTGTCCATCTGTATGTCGCTGTGACGCAGGCTTCATTTACTGTAACGATCGCTCTCTGACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
||
| CDS GCA 72 bp | CCACTGTCCTTGAGCAGGATATGCTGTGTTGGGTATTaGAGTGGTTATCTGAATGGTGCTCACAATCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PLSLSRICCVGY*SGYLNGAHNPT Trigger: AGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | TCCTGTTACGATTGTTTCTGTTATAGATCCAAAGGCTaGGCTATGGCCCAGTTTAAGCCAGCTGAGTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SCYDCFCYRSKG*AMAQFKPAESQ Trigger: CTGCGACTCAGCTGGCTTAAACTGGGCCATAGCCCAGCCTTTGGATCTATAACAGAAACAATCGTAACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | CTGTCTTTACAATCAAACAGTTCTGCACTGAGGTCCTaGATAGCCATTCCACGGACCTTTTCTGGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSLQSNSSALRS*IAIPRTFSGAW Trigger: CCAAGCCCCAGAAAAGGTCCGTGGAATGGCTATCAAGGACCTCAGTGCAGAACTGTTTGATTGTAAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | TGTAGTTCGCTGATCCTTAATGAGCTTGGGGTTTTTAATATCTGGTaGTTTGGTCACAGGAGCTGGCCACTGTCCTTGAGCAGGATATGC | + |
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Preference number: 6 (lower is better) Translates to: CSSLILNELGVFNIW*FGHRSWPLSLSRIC Trigger: GCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCAGATATTAAAAACCCCAAGCTCATTAAGGATCAGCGAACTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 72 bp | ACAGCGACATACAGATGGACAGGATTTAGCCACAACTaGCAGAGGTGCCACTTGGAAGAACAGCCCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: TATYRWTGFSHN*QRCHLEEQPNF Trigger: AAAATTGGGCTGTTCTTCCAAGTGGCACCTCTGTCAGTTGTGGCTAAATCCTGTCCATCTGTATGTCGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 72 bp | CCATCTAAAACCAGGCGTTTCAGGCTTGTGAGACCATaGAGTGATGGGGAAGAGATCGTTGATATGCGATTG | + |
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Preference number: 6 (lower is better) Translates to: PSKTRRFRLVRP*SDGEEIVDMRL Trigger: CAATCGCATATCAACGATCTCTTCCCCATCACTTCATGGTCTCACAAGCCTGAAACGCCTGGTTTTAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | GTCCTTGAGCAGGATATGCTGTGTTGGGTATTGCAGTaGTTATCTGAATGGTGCTCACAATCCCACTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLEQDMLCWVLQ*LSEWCSQSHCL Trigger: AAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | GTGGTTGTGGGGTTGTACATTCGAAGAGGGGCAGTTTaGGTCTCAATACAAACAGGTGTTTCATCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: VVVGLYIRRGAV*VSIQTGVSSNR Trigger: CCTGTTTGATGAAACACCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCGAATGTACAACCCCACAACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | GGTGGTTGTGGGGTTGTACATTCGAAGAGGGGCAGTTaGGGTCTCAATACAAACAGGTGTTTCATCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: GGCGVVHSKRGS*GLNTNRCFIKQ Trigger: CTGTTTGATGAAACACCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCGAATGTACAACCCCACAACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | TCGATTGAGGGTGGTTGTGGGGTTGTACATTCGAAGAGGGGCAGTTaGGGTCTCAATACAAACAGGTGTTTCATCAAACAGGTAAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: SIEGGCGVVHSKRGS*GLNTNRCFIKQVKV Trigger: AACCTTTACCTGTTTGATGAAACACCTGTTTGTATTGAGACCCAAACTGCCCCTCTTCGAATGTACAACCCCACAACCACCCTCAATCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | AAGGTAGAGTGTTGTAGCATCCTCCGGAATTCCCACTaGAATGGATGTCAGAGAGCGATCGTTACAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: KVECCSILRNSH*NGCQRAIVTVN Trigger: ATTTACTGTAACGATCGCTCTCTGACATCCATTCCAGTGGGAATTCCGGAGGATGCTACAACACTCTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | GTTTTTAATATCTGGTTGTTTGGTCACAGGAGCTGGCCACTGTCCTaGAGCAGGATATGCTGTGTTGGGTATTGCAGTGGTTATCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VFNIWLFGHRSWPLS*SRICCVGYCSGYLN Trigger: ATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGCTCAAGGACAGTGGCCAGCTCCTGTGACCAAACAACCAGATATTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 72 bp | GCCTTAAATAAGAAAAAGCATTTGGGGGTACCCGGTTaGTATGGTTGTCTTGAAGGTAAAGCTTCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ALNKKKHLGVPG*YGCLEGKASSG Trigger: GCCTGAGGAAGCTTTACCTTCAAGACAACCATATCAACCGGGTACCCCCAAATGCTTTTTCTTATTTAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS TCA 72 bp | GCAGGATATGCTGTGTTGGGTATTGCAGTGGTTATCTaGATGGTGCTCACAATCCCACTGTCTTTACAATCA | + |
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Preference number: 6 (lower is better) Translates to: AGYAVLGIAVVI*MVLTIPLSLQS Trigger: TGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 72 bp | GTAGCGACTGTAACCAGTCTCGTACCCATTTCATCTTaGATCCACAATACCAAGGATTGTTGCGAAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: VATVTSLVPISS*IHNTKDCCEES Trigger: TGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACGAGACTGGTTACAGTCGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | TCGGAGGAAATATGGTGTGTATTACAAACTCCTCCTTaGAGATGGGTTCATTGCTTATCGGTAGCATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SEEIWCVLQTPP*RWVHCLSVASG Trigger: TCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACACCATATTTCCTCCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | GTGTGTATTACAAACTCCTCCTTGGAGATGGGTTCATaGCTTATCGGTAGCATCTGGAAAGAAGTTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VCITNSSLEMGS*LIGSIWKEVSL Trigger: CAGGGAAACTTCTTTCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | GGAAATATGGTGTGTATTACAAACTCCTCCTTGGAGATGGGTTCATaGCTTATCGGTAGCATCTGGAAAGAAGTTTCCCTGATTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GNMVCITNSSLEMGS*LIGSIWKEVSLISR Trigger: CCTGGAAATCAGGGAAACTTCTTTCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACACCATATTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | TTCATCCCATTCGGAGGAAATATGGTGTGTATTACAAACTCCTCCTaGGAGATGGGTTCATTGCTTATCGGTAGCATCTGGAAAGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FIPFGGNMVCITNSS*EMGSLLIGSIWKEV Trigger: AACTTCTTTCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACACCATATTTCCTCCGAATGGGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 72 bp | ATGCTGTGTTGGGTATTGCAGTGGTTATCTGAATGGTaGTCACAATCCCACTGTCTTTACAATCAAACAGTT | + |
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Preference number: 6 (lower is better) Translates to: MLCWVLQWLSEW*SQSHCLYNQTV Trigger: AACTGTTTGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | GATATGCTGTGTTGGGTATTGCAGTGGTTATCTGAATaGTGCTCACAATCCCACTGTCTTTACAATCAAACA | + |
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Preference number: 6 (lower is better) Translates to: DMLCWVLQWLSE*CSQSHCLYNQT Trigger: TGTTTGATTGTAAAGACAGTGGGATTGTGAGCACCATTCAGATAACCACTGCAATACCCAACACAGCATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | GTGTTTCATCAAACAGGTAAAGGTTACTGGTTTCCATaGGAACCATGCATACTCTATAGGGTGATTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VFHQTGKGYWFP*EPCILYRVIQV Trigger: AACCTGAATCACCCTATAGAGTATGCATGGTTCCCATGGAAACCAGTAACCTTTACCTGTTTGATGAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | TACAAACAGGTGTTTCATCAAACAGGTAAAGGTTACTaGTTTCCATGGGAACCATGCATACTCTATAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: YKQVFHQTGKGY*FPWEPCILYRV Trigger: CACCCTATAGAGTATGCATGGTTCCCATGGAAACCAGTAACCTTTACCTGTTTGATGAAACACCTGTTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | GAAATATGGTGTGTATTACAAACTCCTCCTTGGAGATaGGTTCATTGCTTATCGGTAGCATCTGGAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: EIWCVLQTPPWR*VHCLSVASGKK Trigger: CTTCTTTCCAGATGCTACCGATAAGCAATGAACCCATCTCCAAGGAGGAGTTTGTAATACACACCATATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | CTCACCAGGGACAGCTCTGTTAAGTTTACTAAGTTGAAGAAAACTTaGTCACCCAAACCATGGTTGTTCAACAAGTTTCCATCTAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LTRDSSVKFTKLKKT*SPKPWLFNKFPSKT Trigger: GGTTTTAGATGGAAACTTGTTGAACAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTTAGTAAACTTAACAGAGCTGTCCCTGGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | AACCAGTCTCGTACCCATTTCATCTTGCATCCACAATACCAAGGATaGTTGCGAAGAATCAGTTGGGTTATATTGTCCAAATCATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NQSRTHFILHPQYQG*LRRISWVILSKSSK Trigger: CTTTGATGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACGAGACTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | GCATCCACAATACCAAGGATTGTTGCGAAGAATCAGTaGGGTTATATTGTCCAAATCATCAAAGATACCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASTIPRIVAKNQ*GYIVQIIKDTL Trigger: CAGGGTATCTTTGATGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | CGTACCCATTTCATCTTGCATCCACAATACCAAGGATaGTTGCGAAGAATCAGTTGGGTTATATTGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RTHFILHPQYQG*LRRISWVILSK Trigger: TTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | GTTAAGTTTACTAAGTTGAAGAAAACTTTGTCACCCAAACCATGGTaGTTCAACAAGTTTCCATCTAAAACCAGGCGTTTCAGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: VKFTKLKKTLSPKPW*FNKFPSKTRRFRLV Trigger: CACAAGCCTGAAACGCCTGGTTTTAGATGGAAACTTGTTGAACAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTTAGTAAACTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 90 bp | CAGTCTCGTACCCATTTCATCTTGCATCCACAATACCAAGGATTGTaGCGAAGAATCAGTTGGGTTATATTGTCCAAATCATCAAAGATA | + |
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Preference number: 6 (lower is better) Translates to: QSRTHFILHPQYQGL*RRISWVILSKSSKI Trigger: TATCTTTGATGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGTACGAGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS GCA 72 bp | CCCATTTCATCTTGCATCCACAATACCAAGGATTGTTaGGAAGAATCAGTTGGGTTATATTGTCCAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: PISSCIHNTKDC*EESVGLYCPNH Trigger: ATGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | ACCCATTTCATCTTGCATCCACAATACCAAGGATTGTaGCGAAGAATCAGTTGGGTTATATTGTCCAAATCA | + |
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Preference number: 6 (lower is better) Translates to: THFILHPQYQGL*RRISWVILSKS Trigger: TGATTTGGACAATATAACCCAACTGATTCTTCGCAACAATCCTTGGTATTGTGGATGCAAGATGAAATGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CCA 72 bp | TTTACTAAGTTGAAGAAAACTTTGTCACCCAAACCATaGTTGTTCAACAAGTTTCCATCTAAAACCAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: FTKLKKTLSPKP*LFNKFPSKTRR Trigger: ACGCCTGGTTTTAGATGGAAACTTGTTGAACAACCATGGTTTGGGTGACAAAGTTTTCTTCAACTTAGTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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| CDS CAA 72 bp | TACTTTGGAAGGTTGGTAGGGAATTCATCTAAACTGTaGTGGTATAGGTATATTCTTTGTACTTTCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: YFGRLVGNSSKL*WYRYILCTFSK Trigger: CTTGCTGAAAGTACAAAGAATATACCTATACCACAACAGTTTAGATGAATTCCCTACCAACCTTCCAAAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056760.4 ENSMUST00000110057.3 |
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