RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLNC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068699

Ensembl transcript IDs: ENSMUST00000065090.8, ENSMUST00000101617.9

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGAGCACATCACTCGGGGCCAGTCCACACATCACATGCTGCTTaGTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCC +
Preference number: 1 (lower is better)
Translates to: GRAHHSGPVHTSHAA*SGSAVFHCSFFSKP
Trigger: GGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGATGTGCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CCA 90 bp GTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTaGCTACCAGACGGGCCTGACAGAGTCCTTAGGCACGGCGGTTTG +
Preference number: 1 (lower is better)
Translates to: VFHCSFFSKPFTLGL*LPDGPDRVLRHGGL
Trigger: CAAACCGCCGTGCCTAAGGACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR GCA 90 bp TCACTCGGGGCCAGTCCACACATCACATGCTGCTTGCTCTGGGTCTaGCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGG +
Preference number: 1 (lower is better)
Translates to: SLGASPHITCCLLWV*RLPLLFLFQALHSR
Trigger: CCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CCA 90 bp AGCACATCACTCGGGGCCAGTCCACACATCACATGCTGCTTGCTCTaGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAC +
Preference number: 1 (lower is better)
Translates to: STSLGASPHITCCLL*VCRLPLLFLFQALH
Trigger: GTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CAA 90 bp GGGCAGAGCACATCACTCGGGGCCAGTCCACACATCACATGCTGCTaGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: GQSTSLGASPHITCC*LWVCRLPLLFLFQA
Trigger: GGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGATGTGCTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCAGTGGGGGCCTGGTCTaGGGGGCAATACTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILSGGLV*GAILLR
Trigger: TCTCAGAAGTATTGCCCCCCAGACCAGGCCCCCACT...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAGCCTCACCCCAGTCTaGCCTTGGGCCACATTTGAG +
Preference number: 2 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFSLTPV*PWATFE
Trigger: CTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGACCCCAGTCTGCCCTTaGGCCACATTTGAGGGACAC +
Preference number: 2 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGTPVCP*ATFEGH
Trigger: GTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTAGCCTCACCCCAGTCTaGCCTTGGGCCACATTTGAG +
Preference number: 2 (lower is better)
Translates to: CRLPLLFLFQALHSRAVASLTPV*PWATFE
Trigger: CTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTAGTGGGGGCCTGGTCTaGGGGGCAATACTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: CRLPLLFLFQALHSRAVASGGLV*GAILLR
Trigger: TCTCAGAAGTATTGCCCCCCAGACCAGGCCCCCACT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGTGTGCAGAGGGGTGTaGCACATCTGTGTGGGTATG +
Preference number: 2 (lower is better)
Translates to: AVCEGDFSLTQILQLSACVCRGV*HICVGM
Trigger: CATACCCACACAGATGTGCCACACCCCTCTGCACAC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CAA 90 bp AGTCCACACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATaGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACC +
Preference number: 2 (lower is better)
Translates to: SPHITCCLLWVCRLP*LFLFQALHSRAVAT
Trigger: GGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGACATCTGTGTGGGTATaGGTTTGGCAGGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGTSVWV*VWQEVG
Trigger: CCCCACTTCCTGCCAAACTCATACCCACACAGATGT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR GCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTTATTTCACAGTCTCTaGCCGGAGCCTCACCCCAGT +
Preference number: 2 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGLFHSL*PEPHPS
Trigger: ACTGGGGTGAGGCTCCGGGCAGAGACTGTGAAATAA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGTGTGCAGAGGGGTGTaGCACATCTGTGTGGGTATG +
Preference number: 2 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAVCRGV*HICVGM
Trigger: CATACCCACACAGATGTGCCACACCCCTCTGCACAC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR TCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCACATTTGAGGGACACTaGTCTGAGACAGATAAAGGC +
Preference number: 2 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILTFEGH*SETDKG
Trigger: GCCTTTATCTGTCTCAGATCAGTGTCCCTCAAATGT...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGACATTTGAGGGACACTaGTCTGAGACAGATAAAGGC +
Preference number: 2 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGTFEGH*SETDKG
Trigger: GCCTTTATCTGTCTCAGATCAGTGTCCCTCAAATGT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CCA 72 bp CTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTaGCATCAGCCCCACTATGACCCCCAAGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: LSHRSSNSVLAH*HQPHYDPQGFP
Trigger: GGGGAAGCCTTGGGGGTCATAGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR GCA 72 bp CAGAGCACATCACTCGGGGCCAGTCCACACATCACATaGTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTC +
Preference number: 3 (lower is better)
Translates to: QSTSLGASPHIT*CLLWVCRLPLL
Trigger: GAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGATGTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CCA 72 bp TGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTaGCTACCAGACGGGCCTGACAGAGTCCTTAGGCAC +
Preference number: 3 (lower is better)
Translates to: CSFFSKPFTLGL*LPDGPDRVLRH
Trigger: GTGCCTAAGGACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR GCA 72 bp CATCACTCGGGGCCAGTCCACACATCACATGCTGCTTaGTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTT +
Preference number: 3 (lower is better)
Translates to: HHSGPVHTSHAA*SGSAVFHCSFF
Trigger: AAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR CCA 72 bp CTCGGGGCCAGTCCACACATCACATGCTGCTTGCTCTaGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAA +
Preference number: 3 (lower is better)
Translates to: LGASPHITCCLL*VCRLPLLFLFQ
Trigger: TTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGCCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR GCA 72 bp TCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTaGTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTG +
Preference number: 3 (lower is better)
Translates to: SHAACSGSAVFH*SFFSKPFTLGL
Trigger: CAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
3UTR GCA 72 bp GCCAGTCCACACATCACATGCTGCTTGCTCTGGGTCTaGCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTT +
Preference number: 3 (lower is better)
Translates to: ASPHITCCLLWV*RLPLLFLFQAL
Trigger: AAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGTGTGGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGGATGCCCGAGGCATTaGGGCCAGGGCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDGCPRH*GQGHWP
Trigger: GGGCCAGTGGCCCTGGCCTCAATGCCTCGGGCATCC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCGCACACCTTTGGGCTaGAGGCCCCGCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDRTPLG*RPRPEA
Trigger: AGCCTCTGGGCGGGGCCTGCAGCCCAAAGGTGTGCG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCTGCCTCTCCAGCCTTaGCACGCTCCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDLPLQP*HAPGLA
Trigger: GGCCAGGCCTGGAGCGTGGCAAGGCTGGAGAGGCAG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGGGCACCCAGAGCCTTaGCGTCCTGCCAGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDGHPEP*RPASLG
Trigger: ACCGAGACTGGCAGGACGGCAAGGCTCTGGGTGCCC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGCGGCGAGCGTCGTCTaGGAGGGAGGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAAASVV*EGGHGH
Trigger: GTGCCCGTGGCCTCCCTCTCAGACGACGCTCGCCGC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGTCCTCTGTGGCCCAGTaGGTGGGGCAGGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLSSVAQ*VGQVPG
Trigger: GCCTGGCACCTGCCCCACGCACTGGGCCACAGAGGA...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065090.8
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCCGCTCAGGATGGCTaGCTTCTCCCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPAQDG*LLPHSP
Trigger: GGGTGAATGTGGGAGAAGGCAGCCATCCTGAGCGGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCCAGCACGGCCACCTaGAGAGGGGCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACPSTAT*RGARPA
Trigger: AGCTGGCCGGGCCCCTCTGCAGGTGGCCGTGCTGGG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCGTGCTTGCCACTCTTaGGCACGCTCACCACGTGCT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDRACHS*ARSPRA
Trigger: AGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCACTATGCAGCCAGTaGGCTCCAGGCCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPLCSQ*APGQVQ
Trigger: TTGGACCTGGCCTGGAGCCCACTGGCTGCATAGTGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGATGGTGTACTCGCCTaGCTCCGTGGGCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDDGVLA*LRGQVA
Trigger: AGCTACCTGCCCACGGAGCCAGGCGAGTACACCATC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGCACGTGGACACGGGTaGGGAACTTGGGTATGGGGT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDARGHG*GTWVWG
Trigger: ACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATTGTTGTCCTTGCAGGTaGTCTCCGCCTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDCCPCR*SPPWMG
Trigger: GCCCATCCAAGGCGGAGATCACCTGCAAGGACAACA...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCGCACACCTTTGGGCTaGAGGCCCCGCCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILRTPLG*RPRPEA
Trigger: AGCCTCTGGGCGGGGCCTGCAGCCCAAAGGTGTGCG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGAGGTCCAGTGGGGGTaGCACATTCACCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDEVQWG*HIHHKG
Trigger: CCCTTTGTGGTGAATGTGGCACCCCCACTGGACCTC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGACAGCCTGGGCTTCTaGTCCACCCCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTDSLGF*STPRLQ
Trigger: CTGGAGCCTGGGGGTGGAGCAGAAGCCCAGGCTGTC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGGCCAAGGCCTCCTGTaGCAGCACCCCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLGQGLL*QHPWFP
Trigger: TGGAAACCAGGGGTGCTGGCACAGGAGGCCTTGGCC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCCAGCACGGCCACCTaGAGAGGGGCCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPSTAT*RGARPA
Trigger: AGCTGGCCGGGCCCCTCTGCAGGTGGCCGTGCTGGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGCCTCACCTTCCTGCTaGCGGGTGATGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLASPSC*RVMLPK
Trigger: CTTCGGCAGCATCACCCGGCAGCAGGAAGGTGAGGC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTCACACGCACACCTTTaGGCTGCAGGCCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSHAHL*AAGPAQ
Trigger: CTGGGCGGGGCCTGCAGCCCAAAGGTGTGCGTGTGA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCGCCACGCTCCAGGCCTaGCCCACTGGCCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILATLQA*PTGPHL
Trigger: AAGGTGAGGGCCAGTGGGCCAGGCCTGGAGCGTGGC...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCACGGGTGGGGAACTTaGGTATGGGGTGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLHGWGT*VWGGRH
Trigger: ATGGCGGCCACCCCATACCCAAGTTCCCCACCCGTG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCGCTCAGCCACACCTGTaGGGCCCAGCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILAQPHL*GPARPP
Trigger: AGGTGGCCGTGCTGGGCCCCACAGGTGTGGCTGAGC...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGGGTCTCCGCCGACCTaGGTGGACTCCTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAGSPPT*VDSSTR
Trigger: CCGAGTGGAGGAGTCCACCCAGGTCGGCGGAGACCC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGGGATGGGTCCACCTTaGTGTGGAAGGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLGMGPP*CGRDWQ
Trigger: CTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGGTTGCCGTCGTACTTaGTCCCCATCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLGCRRT*SPSGAG
Trigger: GCCTGCACCAGATGGGGATCAAGTACGACGGCAACC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCAGTCGGGCAGTAGGTaGCTTTGCAGGTACCGTCTT +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDQSGSR*LCRYRL
Trigger: AAGACGGTACCTGCAAAGTCACCTACTGCCCGACTG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGCGGCGAGCGTCGTCTaGGAGGGAGGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHAASVV*EGGHGH
Trigger: GTGCCCGTGGCCTCCCTCTCAGACGACGCTCGCCGC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCTCCTCCACAGCTCCTaGGGGTGTGTGTACCCGGGC +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLLHSS*GCVYPG
Trigger: GCCCGGGTACACACACCCTCAGGAGCTGTGGAGGAG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGGGCACCCAGAGCCTTaGCGTCCTGCCAGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWGHPEP*RPASLG
Trigger: ACCGAGACTGGCAGGACGGCAAGGCTCTGGGTGCCC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTAGCCTCGCCCTTGGCTaGCCCAGCAAAGTGCACGTC +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSLALG*PSKVHV
Trigger: GACGTGCACTTTGCTGGGGCAGCCAAGGGCGAGGCT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGACAGCCTGGGCTTCTaGTCCACCCCCAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRADSLGF*STPRLQ
Trigger: CTGGAGCCTGGGGGTGGAGCAGAAGCCCAGGCTGTC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCTGCCTCTCCAGCCTTaGCACGCTCCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFLPLQP*HAPGLA
Trigger: GGCCAGGCCTGGAGCGTGGCAAGGCTGGAGAGGCAG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGTATCAACTGCAGGCTaGACGTGGACACGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLVSTAG*TWTRVG
Trigger: CCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATAC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAGTGCGTGGGGCAGGTaGCAGGCCGAAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWSAWGR*QAEEGH
Trigger: ATGCCCCTCTTCGGCCTGGCACCTGCCCCACGCACT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065090.8
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTCACACGCACACCTTTaGGCTGCAGGCCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILSHAHL*AAGPAQ
Trigger: CTGGGCGGGGCCTGCAGCCCAAAGGTGTGCGTGTGA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCATGCCCGCACTTTCTaGGCTCCGGCCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAHARTF*APASGL
Trigger: GAGCCCAGAGGCCGGAGCCCAGAAAGTGCGGGCATG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCGCCACGCTCCAGGCCTaGCCCACTGGCCCTCACCTT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFATLQA*PTGPHL
Trigger: AAGGTGAGGGCCAGTGGGCCAGGCCTGGAGCGTGGC...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCTCCGCCGACCTGGGTaGACTCCTCCACTCGGACTT +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVLRRPG*TPPLGL
Trigger: AAGTCCGAGTGGAGGAGTCCACCCAGGTCGGCGGAG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGCTTGCCCACACACTTaGGATGCTCGTTGCACCACC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLACPHT*DARCTT
Trigger: GGTGGTGCAACGAGCATCTCAAGTGTGTGGGCAAGC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCAGGGGCACCGGGTTTaGGCTTGGCCTTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTQGHRV*AWPWET
Trigger: AGTTTCCCAAGGCCAAGCTCAAACCCGGTGCCCCTG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCACCAGGGCCACGGGCTaGTACCTTGTTGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRATRATG*YLVGIP
Trigger: GGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGGGATGGGTCCACCTTaGTGTGGAAGGGACTGGCAG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVGMGPP*CGRDWQ
Trigger: CTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGGCAGGGCTGTAGGTaGTGTGGTAGGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDRQGCR*CGRCRP
Trigger: CGGACGGCACCTACCACATCACCTACAGCCCTGCCT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGGATGCCCGAGGCATTaGGGCCAGGGCCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHGCPRH*GQGHWP
Trigger: GGGCCAGTGGCCCTGGCCTCAATGCCTCGGGCATCC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATTGGGCAGACACCATCTaGAACCAGTTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDWADTI*NQFPGI
Trigger: GATCCCAGGAAACTGGTTTCAGATGGTGTCTGCCCA...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCTTCCTGCTGCCGGGTaGTGCTGCCGAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFLPAAG*CCRRSP
Trigger: TGGGCTCCTTCGGCAGCATCACCCGGCAGCAGGAAG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCTCCTCCACAGCTCCTaGGGGTGTGTGTACCCGGGC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFLLHSS*GCVYPG
Trigger: GCCCGGGTACACACACCCTCAGGAGCTGTGGAGGAG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGACTCCGGGTGATGGGTaGACCAGCAAAGGCCACATG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLTPGDG*TSKGHM
Trigger: CATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCCGCCCAGAGGCTCTaGAGGCGTTGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPAQRL*RRWGYR
Trigger: CCTGTAACCCCAACGCCTGCAGAGCCTCTGGGCGGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCAGGCCTGTCCACTATaGAGCCAGTGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWQACPL*SQWAPG
Trigger: GCCTGGAGCCCACTGGCTGCATAGTGGACAGGCCTG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCGACTTCCACACCTGTaGGGCTCAGCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRARLPHL*GSAQDP
Trigger: AGGGTCCTGGGCTGAGCCGCACAGGTGTGGAAGTCG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGAGGTCCAGTGGGGGTaGCACATTCACCACAAAGGG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLEVQWG*HIHHKG
Trigger: CCCTTTGTGGTGAATGTGGCACCCCCACTGGACCTC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCACGGTGAAGGTGGCTaGCTCTCCAGCCTTGCCACG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWHGEGG*LSSLAT
Trigger: CGTGGCAAGGCTGGAGAGGCAGCCACCTTCACCGTG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCAGGTCACCTTCCCCTTaGCTGCTGCCTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVRSPSP*LLPWRP
Trigger: TGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCT...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCCCAGACTCGAACTTTaGTGGCATCCCCGATCTCCG +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLPRLEL*WHPRSP
Trigger: CGGAGATCGGGGATGCCAGCAAAGTTCGAGTCTGGG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCCTCACCTTCCTGCTaGCGGGTGATGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWASPSC*RVMLPK
Trigger: CTTCGGCAGCATCACCCGGCAGCAGGAAGGTGAGGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCTCGCTCCAGCCCTGTaGCTCCAGCTCGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDLAPAL*LQLAPC
Trigger: ACAAGGTGCGAGCTGGAGGCACAGGGCTGGAGCGAG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATATCAATCACACCACGTaGCCCATTAAGCTGCACCGC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDINHTT*PIKLHR
Trigger: GCGGTGCAGCTTAATGGGGCACGTGGTGTGATTGAT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTCCCCAGCCTGGCTCTaGTCCCCAACACGGATCTTG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVSPAWL*SPTRIL
Trigger: CAAGATCCGTGTTGGGGAGCAGAGCCAGGCTGGGGA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTCTGCACGGGCTGGTTaGGGTCCCAGGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSARAG*GPRLPN
Trigger: ATTGGGAAGCCTGGGACCCCAACCAGCCCGTGCAGA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTCAGGAGCAATCACCTaGGGCACCCCGAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVSGAIT*GTPSQS
Trigger: TGACTGGCTCGGGGTGCCCCAGGTGATTGCTCCTGA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGTCTGCACGGTGAAGTaGGCAGGCTGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTVCTVK*AGCSTV
Trigger: CACTGTGCTGCAGCCTGCCCACTTCACCGTGCAGAC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGAGGCTCTGCAGGCGTTaGGGTTACAGGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLRLCRR*GYRLLP
Trigger: TGGCAGAAGCCTGTAACCCCAACGCCTGCAGAGCCT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCCGACTTGCCCACCTaGCCAGTCTCCAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWADLPT*PVSNPG
Trigger: TCCTGGGTTGGAGACTGGCCAGGTGGGCAAGTCGGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTGAGGGCCCCTCGATaGAGAAGCCCAGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAVRAPR*RSPAFP
Trigger: TGGGAACGCTGGGCTTCTCCATCGAGGGGCCCTCAC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGGGGCTGGCTGGATGTaGGCGATGAAAGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWGAGWM*AMKGES
Trigger: GGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTGGGAAGCAGTCTGGTaGGGCTGGCTGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDWEAVW*GWLDVG
Trigger: GCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGGGTCCACCTTGATGTaGAAGGGACTGGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLGSTLM*KGLAGI
Trigger: GATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGATGGTGTACTCGCCTaGCTCCGTGGGCAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTDGVLA*LRGQVA
Trigger: AGCTACCTGCCCACGGAGCCAGGCGAGTACACCATC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCCGACAGGATCTCGATaGTCAGCTCGGCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWPTGSR*SARPHP
Trigger: CGGGTGAGGCCGAGCTGACCATCGAGATCCTGTCGG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCCGCAGGACACCATGTaGCTCCACACCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWPQDTM*LHTRPR
Trigger: TCTGGGCCTGGTGTGGAGCCACATGGTGTCCTGCGG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCAGGCCCGGACTCGGGTaGGGTCACAGCCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACRPGLG*GHSPQS
Trigger: TGACTGAGGGCTGTGACCCCACCCGAGTCCGGGCCT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAGGCCCGGACTCGGGTaGGGTCACAGCCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFRPGLG*GHSPQS
Trigger: TGACTGAGGGCTGTGACCCCACCCGAGTCCGGGCCT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTGGGGACCCATCTCCTaGGGCACGAATCGCACACTG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVWGPIS*GTNRTL
Trigger: CAGTGTGCGATTCGTGCCCCAGGAGATGGGTCCCCA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCTTCCGGGCACGTGTTaGCCGCGGTACTTGACAGTG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVLPGTC*PRYLTV
Trigger: CACTGTCAAGTACCGCGGCCAACACGTGCCCGGAAG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCTTCCGGGCACGTGTTaGCCGCGGTACTTGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTLPGTC*PRYLTV
Trigger: CACTGTCAAGTACCGCGGCCAACACGTGCCCGGAAG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCCAGCTCGCACCTTGTaGGCACCACCTTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVPARTL*APPSPS
Trigger: GCTAGGTGAAGGTGGTGCCCACAAGGTGCGAGCTGG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATTTAAGCCCTGTCTCCTaGAGGCTGGTAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDLSPVS*RLVTVR
Trigger: CCTCACTGTTACCAGCCTCCAGGAGACAGGGCTTAA...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACGGGCTCCTCTGTaGCCAGCACGTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACPRAPL*PARGKG
Trigger: GCCCTTTCCACGTGCTGGCCACAGAGGAGCCCGTGG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCACCAGGGCCACGGGCTaGTACCTTGTTGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACTRATG*YLVGIP
Trigger: GGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCTGGTCAGCATACTTaGCAGCTACAGTATAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPGQHT*QLQYRD
Trigger: GTCCCTATACTGTAGCTGTCAAGTATGCTGACCAGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCTCCGTGATCTTCAGTaGCACATCGGTGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVLRDLQ*HIGGGA
Trigger: GGCACCTCCACCGATGTGTCACTGAAGATCACGGAG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCCTGTCTGCGCCGAGTaGTGCTTTCCTTCATGCGTC +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTPVCAE*CFPSCV
Trigger: GACGCATGAAGGAAAGCATCACTCGGCGCAGACAGG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGTGCGGGTGTACGTATaGCTGCTCCGCGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDVRVYV*LLRVKV
Trigger: CACCTTCACGCGGAGCAGTCATACGTACACCCGCAC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCTTCCTGCTGCCGGGTaGTGCTGCCGAAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHILPAAG*CCRRSP
Trigger: TGGGCTCCTTCGGCAGCATCACCCGGCAGCAGGAAG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTCGCTGAGGTCTCGCTaGAGGTCGGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFSLRSR*RSVRRL
Trigger: CAAGCGCCTGACCGACCTGCAGCGAGACCTCAGCGA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGTGAAGTGGGCAGGCTaGAGCACAGTGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWVKWAG*STVFPW
Trigger: CCAGGGGAACACTGTGCTGCAGCCTGCCCACTTCAC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCCAGCATCTACTGTCTaGACGGTGAAGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVPASTV*TVKWAG
Trigger: GCCTGCCCACTTCACCGTGCAGACAGTAGATGCTGG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCAGCAAAGGCCACATaGACGGTGTGTGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPAKAT*TVCGPS
Trigger: GGAGGGGCCACACACCGTGCATGTGGCCTTTGCTGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCCGCTCAGGATGGCTaGCTTCTCCCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPAQDG*LLPHSP
Trigger: GGGTGAATGTGGGAGAAGGCAGCCATCCTGAGCGGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGAGCCTCGCCCTTGGCTaGCCCAGCAAAGTGCACGTC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGSLALG*PSKVHV
Trigger: GACGTGCACTTTGCTGGGGCAGCCAAGGGCGAGGCT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCGGCCAAGGCCTCCTGTaGCAGCACCCCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFGQGLL*QHPWFP
Trigger: TGGAAACCAGGGGTGCTGGCACAGGAGGCCTTGGCC...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGTCAGCTCCCCTTTCTaGACAGTGAAGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLVSSPF*TVKGMT
Trigger: GGTCATCCCCTTCACTGTGCAGAAAGGGGAGCTGAC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCGCACGCTCACCACGTaGTCACCGACCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVARTLTT*SPTSLG
Trigger: CCCCAAGGAGGTCGGTGAGCACGTGGTGAGCGTGCG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGGGCTGTTGGTGACGTaGTTGCCACTCTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDGLLVT*LPLLRT
Trigger: CGTGCGCAAGAGTGGCAAGCACGTCACCAACAGCCC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCTAGGTCCTTCTCCGTaGACGGCATCTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRALGPSP*TASRPP
Trigger: AGGCGGACGAGATGCCGTCCACGGAGAAGGACCTAG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTCATTTGGCGGAAGTTaGGGCGCGGGTGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSFGGS*GAGGTC
Trigger: GCAAGTTCCACCCGCGCCCCAACTTCCGCCAAATGA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGCATTCTGCACGGGCTaGTTGGGGTCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACAFCTG*LGSQAS
Trigger: GGAAGCCTGGGACCCCAACCAGCCCGTGCAGAATGC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGCATTCTGCACGGGCTaGTTGGGGTCCCAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGAFCTG*LGSQAS
Trigger: GGAAGCCTGGGACCCCAACCAGCCCGTGCAGAATGC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTCAGGAGCAATCACCTaGGGCACCCCGAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILSGAIT*GTPSQS
Trigger: TGACTGGCTCGGGGTGCCCCAGGTGATTGCTCCTGA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCACATGCACGGTGTGTaGCCCCTCCATCACGGGCCT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFHMHGV*PLHHGP
Trigger: AGGCCCGTGATGGAGGGGCCACACACCGTGCATGTG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCATGCCCGCACTTTCTaGGCTCCGGCCTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAHARTF*APASGL
Trigger: GAGCCCAGAGGCCGGAGCCCAGAAAGTGCGGGCATG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCACTCCCCAGGCTCCGTaGGCCAGTACCGCACGTCAC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHITPQAP*ASTARH
Trigger: GTGACGTGCGGTACTGGCCCACGGAGCCTGGGGAGT...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTCTGGGAAGCAGTCTaGTGGGGCTGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAVWEAV*WGWLDV
Trigger: CACATCCAGCCAGCCCCACCAGACTGCTTCCCAGAC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCCCCTTGGTGTCAATaGAGAATGGTGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPPWCQ*RMVPGC
Trigger: GCACCCCGGCACCATTCTCCATTGACACCAAGGGGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCGCAGGACACCATGTaGCTCCACACCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPQDTM*LHTRPR
Trigger: TCTGGGCCTGGTGTGGAGCCACATGGTGTCCTGCGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGCTCAGCCACACCTGTaGGGCCCAGCACGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSAQPHL*GPARPP
Trigger: AGGTGGCCGTGCTGGGCCCCACAGGTGTGGCTGAGC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTCCCAATGTGCCTGTTaGGCAGGCGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDSQCAC*AGASAG
Trigger: GCCTGCTGAAGCGCCTGCCCAACAGGCACATTGGGA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGGGTCTCCGCCGACCTaGGTGGACTCCTCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSGSPPT*VDSSTR
Trigger: CCGAGTGGAGGAGTCCACCCAGGTCGGCGGAGACCC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTCATGTCCTGAGAGCTaGCCTCACCTTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVSCPES*PHLPAA
Trigger: GGCAGCAGGAAGGTGAGGCCAGCTCTCAGGACATGA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCTTGCCCACACACTTaGGATGCTCGTTGCACCACC +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWACPHT*DARCTT
Trigger: GGTGGTGCAACGAGCATCTCAAGTGTGTGGGCAAGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCGATGGACACGAGCTTaGTGTGTTCCCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWRWTRA*CVPAPG
Trigger: TCCTGGAGCGGGAACACATCAAGCTCGTGTCCATCG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCGATGGACACGAGCTTaGTGTGTTCCCGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILRWTRA*CVPAPG
Trigger: TCCTGGAGCGGGAACACATCAAGCTCGTGTCCATCG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCACGGGCATCAATGGTaGACTCGGCAGGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFHGHQW*TRQACP
Trigger: TGGACAGGCCTGCCGAGTTCACCATTGATGCCCGTG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCAGGCAGGGCTGTAGGTaGTGTGGTAGGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIRQGCR*CGRCRP
Trigger: CGGACGGCACCTACCACATCACCTACAGCCCTGCCT...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGGTTGCCGTCGTACTTaGTCCCCATCTGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACGCRRT*SPSGAG
Trigger: GCCTGCACCAGATGGGGATCAAGTACGACGGCAACC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCGTCAAAGCGCACGATaGTGCTGTAGTCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDRQSAR*CCSLRV
Trigger: CACCCGGAGACTACAGCATCATCGTGCGCTTTGACG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCTCCGTGATCTTCAGTaGCACATCGGTGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRALRDLQ*HIGGGA
Trigger: GGCACCTCCACCGATGTGTCACTGAAGATCACGGAG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCACCCCGAGTCTTGCTaGTCTCTGTCCGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACHPESC*SLSALC
Trigger: GCACAGAGCGGACAGAGATCAGCAAGACTCGGGGTG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGGGCTGTCATGTCCTaGGAGCTGGCCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFWAVMS*ELASPS
Trigger: GGAAGGTGAGGCCAGCTCTCAGGACATGACAGCCCA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGGACCCACAGTGAACTaGAAAGGGCTTCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGGPTVN*KGLPGT
Trigger: CGTGCCCGGAAGCCCTTTTCAGTTCACTGTGGGTCC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCAGCCAAGCAGTCGCTaGTTGGGTGTCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAQPSSR*LGVCLR
Trigger: CCGCAAACAGACACCCAAGCAGCGACTGCTTGGCTG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTCCCCTGGGGCTCAATaGCAGGCCCATAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGSPGAQ*QAHRQW
Trigger: CCATTGCCTATGGGCCTGGCATTGAGCCCCAGGGGA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCAGCAAAGGCCACATaGACGGTGTGTGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPAKAT*TVCGPS
Trigger: GGAGGGGCCACACACCGTGCATGTGGCCTTTGCTGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGGGGTTACAGGCTTCTaGCACATGGACAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTGVTGF*HMDRER
Trigger: CCTTTCCCTGTCCATGTGGCAGAAGCCTGTAACCCC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCCCGCCCAGAGGCTCTaGAGGCGTTGGGGTTACAGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSPAQRL*RRWGYR
Trigger: CCTGTAACCCCAACGCCTGCAGAGCCTCTGGGCGGG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGAACCTCAAAAGGACTaGGGGGAATGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLEPQKD*GEWHSH
Trigger: GTGGCTATGCCATTCCCCGCAGTCCTTTTGAGGTTC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCGACTTCCACACCTGTaGGGCTCAGCCCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIRLPHL*GSAQDP
Trigger: AGGGTCCTGGGCTGAGCCGCACAGGTGTGGAAGTCG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCACGGTGAAGGTGGCTaGCTCTCCAGCCTTGCCACG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIHGEGG*LSSLAT
Trigger: CGTGGCAAGGCTGGAGAGGCAGCCACCTTCACCGTG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGCCACTGGTATCAACTaGAGGCTGCACGTGGACACG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAATGIN*RLHVDT
Trigger: CGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCACTGGCCCGCACTTTaGTGGCATCATGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTHWPAL*WHHGME
Trigger: TTCCATCCCATGATGCCAGCAAAGTGCGGGCCAGTG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAGGTCACCTTCCCCTTaGCTGCTGCCTTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFRSPSP*LLPWRP
Trigger: TGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTCCACATCGAGCTCTaGCCCATCGGGTGTGGATAC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAVHIEL*PIGCGY
Trigger: GTATCCACACCCGATGGGGCAGAGCTCGATGTGGAC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGTCAGCTCCCCTTTCTaGACAGTGAAGGGGATGACC +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTVSSPF*TVKGMT
Trigger: GGTCATCCCCTTCACTGTGCAGAAAGGGGAGCTGAC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTAAGGAGATCCCAATGTaGCTGTTGGGCAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTKEIPM*LLGRRF
Trigger: GAAGCGCCTGCCCAACAGGCACATTGGGATCTCCTT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCGCACGCTCACCACGTaGTCACCGACCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSRTLTT*SPTSLG
Trigger: CCCCAAGGAGGTCGGTGAGCACGTGGTGAGCGTGCG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCGTGCTTGCCACTCTTaGGCACGCTCACCACGTGCT +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACRACHS*ARSPRA
Trigger: AGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCGGGCTGTTGGTGACGTaGTTGCCACTCTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFGLLVT*LPLLRT
Trigger: CGTGCGCAAGAGTGGCAAGCACGTCACCAACAGCCC...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCATCATGTTGGTGCCTaGTTTGCTGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLHHVGA*FAAVHG
Trigger: ACCGTGGACTGCAGCAAAGCAGGCACCAACATGATG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCTAGGTCCTTCTCCGTaGACGGCATCTCGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFLGPSP*TASRPP
Trigger: AGGCGGACGAGATGCCGTCCACGGAGAAGGACCTAG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTCATTTGGCGGAAGTTaGGGCGCGGGTGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRASFGGS*GAGGTC
Trigger: GCAAGTTCCACCCGCGCCCCAACTTCCGCCAAATGA...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTCTGCACGGGCTGGTTaGGGTCCCAGGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFSARAG*GPRLPN
Trigger: ATTGGGAAGCCTGGGACCCCAACCAGCCCGTGCAGA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGCTGCATGGCCTCTCTaGCATTCTGCACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACAAWPL*HSARAG
Trigger: ACCAGCCCGTGCAGAATGCCAGAGAGGCCATGCAGC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGTCTGCACGGTGAAGTaGGCAGGCTGCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGVCTVK*AGCSTV
Trigger: CACTGTGCTGCAGCCTGCCCACTTCACCGTGCAGAC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCATCCCGACGTCCCTGTaGGTCCACGATCACCACAGC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFIPTSL*VHDHHS
Trigger: GCTGTGGTGATCGTGGACCCACAGGGACGTCGGGAT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCATCCCGACGTCCCTGTaGGTCCACGATCACCACAGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACIPTSL*VHDHHS
Trigger: GCTGTGGTGATCGTGGACCCACAGGGACGTCGGGAT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCACATGCACGGTGTGTaGCCCCTCCATCACGGGCCT +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIHMHGV*PLHHGP
Trigger: AGGCCCGTGATGGAGGGGCCACACACCGTGCATGTG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAGGCTCTGCAGGCGTTaGGGTTACAGGCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWRLCRR*GYRLLP
Trigger: TGGCAGAAGCCTGTAACCCCAACGCCTGCAGAGCCT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCGGGGCTGGCTGGATGTaGGCGATGAAAGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIGAGWM*AMKGES
Trigger: GGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCC...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTCTGGTGGGGCTGGCTaGATGTGGGCGATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGSGGAG*MWAMKG
Trigger: GCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGTCTGGGAAGCAGTCTaGTGGGGCTGGCTGGATGTG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACVWEAV*WGWLDV
Trigger: CACATCCAGCCAGCCCCACCAGACTGCTTCCCAGAC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAGGCCCCACCACGCCTaGAGCACACTTGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWRPHHA*STLDAN
Trigger: ATTGGCATCAAGTGTGCTCCAGGCGTGGTGGGGCCT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGGGTCCACCTTGATGTaGAAGGGACTGGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDGSTLM*KGLAGI
Trigger: GATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTTTGCTGAGGTCCAGTaGGGGTGCCACATTCACCAC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVFAEVQ*GCHIHH
Trigger: GTGGTGAATGTGGCACCCCCACTGGACCTCAGCAAA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCTGTGCCGGCCCCCTTaGTGTCAATGGAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRALCRPP*CQWRMV
Trigger: CACCATTCTCCATTGACACCAAGGGGGCCGGCACAG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCTGTGCCGGCCCCCTTaGTGTCAATGGAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLCRPP*CQWRMV
Trigger: CACCATTCTCCATTGACACCAAGGGGGCCGGCACAG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCACGGGTGGGGAACTTaGGTATGGGGTGGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIHGWGT*VWGGRH
Trigger: ATGGCGGCCACCCCATACCCAAGTTCCCCACCCGTG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGACACGAGCTGTCACATaGTTGCCGCCTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLTRAVT*LPPVAV
Trigger: AACAGCTACAGGCGGCAACCATGTGACAGCTCGTGT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCAGGCACCCAGTCCATaGCCTCCAATGGACACTGTA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTQAPSP*PPMDTV
Trigger: TACAGTGTCCATTGGAGGCCATGGACTGGGTGCCTG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTCACAGGCCAGCACGTaGAAAGGGCTGTTGGGGATG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDSQAST*KGLLGM
Trigger: CATCCCCAACAGCCCTTTCCACGTGCTGGCCTGTGA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065090.8
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTCCCAATGTGCCTGTTaGGCAGGCGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACSQCAC*AGASAG
Trigger: GCCTGCTGAAGCGCCTGCCCAACAGGCACATTGGGA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCACAGGTGCTACCAATaGTGGCAATGGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTHRCYQ*WQWRVP
Trigger: AGGCACCCTCCATTGCCACCATTGGTAGCACCTGTG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCTGAAACCAGTTTCCTaGGATCTTGAGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDLKPVS*DLEVEV
Trigger: GACCTCAACCTCAAGATCCCAGGAAACTGGTTTCAG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCTCCGCCGACCTGGGTaGACTCCTCCACTCGGACTT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVALRRPG*TPPLGL
Trigger: AAGTCCGAGTGGAGGAGTCCACCCAGGTCGGCGGAG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTCATGTCCTGAGAGCTaGCCTCACCTTCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILSCPES*PHLPAA
Trigger: GGCAGCAGGAAGGTGAGGCCAGCTCTCAGGACATGA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGGGGACCCATCTCCTaGGGCACGAATCGCACACTG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFWGPIS*GTNRTL
Trigger: CAGTGTGCGATTCGTGCCCCAGGAGATGGGTCCCCA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCGCCTCTGGGCTCACCTaGACCTCAAAAGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIASGLT*TSKGLR
Trigger: CCGCAGTCCTTTTGAGGTTCAGGTGAGCCCAGAGGC...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTTCAATCTTGGCTTGTaGGGGCCCCTCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVFNLGL*GPLDGE
Trigger: TTCTCCATCGAGGGGCCCTCACAAGCCAAGATTGAA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCACGGGCATCAATGGTaGACTCGGCAGGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAHGHQW*TRQACP
Trigger: TGGACAGGCCTGCCGAGTTCACCATTGATGCCCGTG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCGTTGGGGATCACCTTaGTGTCGATGGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGRWGSP*CRWGSH
Trigger: ATGGCTGCCCCATCGACATCAAGGTGATCCCCAACG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCCGTGGGCAGGTAGCTaGCTGCACAAGATCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIPWAGS*LHKIRH
Trigger: GTGACGGATCTTGTGCAGTCAGCTACCTGCCCACGG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCGTGGGCAGGTAGCTaGCTGCACAAGATCCGTCAC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPWAGS*LHKIRH
Trigger: GTGACGGATCTTGTGCAGTCAGCTACCTGCCCACGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCAGCAAACAGGATATTaGTGGTGTACTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLQQTGY*WCTRLA
Trigger: AGCCAGGCGAGTACACCATCAATATCCTGTTTGCTG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCAGGCCCAGAGACCTTaGTGCCACTGGTATCAACTG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWQAQRP*CHWYQL
Trigger: CAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCCCTGGTTTCCACAGTaGAGCGGTTGGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAPWFPQ*SGWPCS
Trigger: TGAACAAGGCCAACCGCTTCACTGTGGAAACCAGGG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGTTGTCCTTGCAGGTaGTCTCCGCCTTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFCCPCR*SPPWMG
Trigger: GCCCATCCAAGGCGGAGATCACCTGCAAGGACAACA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCAGTCGGGCAGTAGGTaGCTTTGCAGGTACCGTCTT +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDQSGSR*LCRYRL
Trigger: AAGACGGTACCTGCAAAGTCACCTACTGCCCGACTG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGTGCGGGTGTACGTATaGCTGCTCCGCGTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAVRVYV*LLRVKV
Trigger: CACCTTCACGCGGAGCAGTCATACGTACACCCGCAC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCACCCCGAGTCTTGCTaGTCTCTGTCCGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAHPESC*SLSALC
Trigger: GCACAGAGCGGACAGAGATCAGCAAGACTCGGGGTG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTGGGCTGTCATGTCCTaGGAGCTGGCCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAWAVMS*ELASPS
Trigger: GGAAGGTGAGGCCAGCTCTCAGGACATGACAGCCCA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGGACCCACAGTGAACTaGAAAGGGCTTCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAGPTVN*KGLPGT
Trigger: CGTGCCCGGAAGCCCTTTTCAGTTCACTGTGGGTCC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGACAGACAAAGCCCCTaGGCCTGCATTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDDRQSP*ACILGV
Trigger: AACACCCAGAATGCAGGCTCAGGGGCTTTGTCTGTC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTCGCTGAGGTCTCGCTaGAGGTCGGTCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSSLRSR*RSVRRL
Trigger: CAAGCGCCTGACCGACCTGCAGCGAGACCTCAGCGA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGCCTCTCTGGCATTCTaGACGGGCTGGTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSASLAF*TGWLGS
Trigger: GGACCCCAACCAGCCCGTGCAGAATGCCAGAGAGGC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGCCTCTCTGGCATTCTaGACGGGCTGGTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSASLAF*TGWLGS
Trigger: GGACCCCAACCAGCCCGTGCAGAATGCCAGAGAGGC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGAACCTCAAAAGGACTaGGGGGAATGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVEPQKD*GEWHSH
Trigger: GTGGCTATGCCATTCCCCGCAGTCCTTTTGAGGTTC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCAGGCCTGTCCACTATaGAGCCAGTGGGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSQACPL*SQWAPG
Trigger: GCCTGGAGCCCACTGGCTGCATAGTGGACAGGCCTG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGTAGGTCACTGTTACTaGCATGTTGCCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVVGHCY*HVALLH
Trigger: GTGCAGCAGGGCAACATGGCAGTAACAGTGACCTAC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGGGCAGGTAGCTGACTaGACAAGATCCGTCACCATT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTGQVAD*TRSVTI
Trigger: AATGGTGACGGATCTTGTGCAGTCAGCTACCTGCCC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCGTATCAACTGCAGGCTaGACGTGGACACGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIVSTAG*TWTRVG
Trigger: CCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATAC...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTCGGGATCCAGGATCTaGACGGTAAGAAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACSGSRI*TVRSPC
Trigger: GCAGGGGCTTCTTACCGTGCAGATCCTGGATCCCGA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAAGGAGATCCCAATGTaGCTGTTGGGCAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWKEIPM*LLGRRF
Trigger: GAAGCGCCTGCCCAACAGGCACATTGGGATCTCCTT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGGGCTTCCAGGTACGTaGTTGTCAGCAAACTTAATA +
Preference number: 4 (lower is better)
Translates to: LPGASPQSALGPHLRDTDGLPGT*LSANLI
Trigger: TATTAAGTTTGCTGACAAGCACGTACCTGGAAGCCC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCTCGCTCCAGCCCTGTaGCTCCAGCTCGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHLAPAL*LQLAPC
Trigger: ACAAGGTGCGAGCTGGAGGCACAGGGCTGGAGCGAG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCCATCATCATGTTGGTaGCTGCTTTGCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLPSSCW*LLCCSP
Trigger: TGGACTGCAGCAAAGCAGGCACCAACATGATGATGG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAAGCAGTCGCTGCTTaGGTGTCTGTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILQAVAA*VSVCGH
Trigger: ATGCCCGCAAACAGACACCCAAGCAGCGACTGCTTG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTGGGGCACTTTGTTCTaGATCCAGCCAAGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILWGTLF*IQPSSR
Trigger: GCGACTGCTTGGCTGGATCCAGAACAAAGTGCCCCA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGAGTAGGTGGGTTTGTTaGCCACGTTACCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLSRWVC*PRYPQV
Trigger: AACCTGTGGGTAACGTGGCCAACAAACCCACCTACT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGCCGACTTGCCCACCTaGCCAGTCTCCAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSADLPT*PVSNPG
Trigger: TCCTGGGTTGGAGACTGGCCAGGTGGGCAAGTCGGC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGTGAGGGCCCCTCGATaGAGAAGCCCAGCGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSVRAPR*RSPAFP
Trigger: TGGGAACGCTGGGCTTCTCCATCGAGGGGCCCTCAC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCTCTGGTGGGGCTGGCTaGATGTGGGCGATGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHISGGAG*MWAMKG
Trigger: GCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGA...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCTGGCAGGGATCTCCTaGTTGGCAAACAACACCATG +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTLAGIS*LANNTM
Trigger: CATGGTGTTGTTTGCCAACCAGGAGATCCCTGCCAG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCACAAAGGGACTTTTaGGGACAGGGTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPQRDF*GQGPHR
Trigger: ACGGTGGGGACCCTGTCCCCAAAAGTCCCTTTGTGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGGTGTCAATGGAGAATaGTGCCGGGGTGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAGVNGE*CRGAYK
Trigger: CTTGTAGGCACCCCGGCACCATTCTCCATTGACACC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCCCCTTGGTGTCAATaGAGAATGGTGCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPPWCQ*RMVPGC
Trigger: GCACCCCGGCACCATTCTCCATTGACACCAAGGGGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCGACAGGATCTCGATaGTCAGCTCGGCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPTGSR*SARPHP
Trigger: CGGGTGAGGCCGAGCTGACCATCGAGATCCTGTCGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCCGTCCGCGTTGTTTTaGATCAGCACCTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAPSALF*ISTSAL
Trigger: CAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGCACGTGGACACGGGTaGGGAACTTGGGTATGGGGT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAARGHG*GTWVWG
Trigger: ACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACTGCAGGCTGCACGTaGACACGGGTGGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVATAGCT*TRVGNL
Trigger: CAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCTTCGTGGCACCTCCTaGTCAGCATACTTGACAGCT +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVLRGTS*SAYLTA
Trigger: AGCTGTCAAGTATGCTGACCAGGAGGTGCCACGAAG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCTTCGTGGCACCTCCTaGTCAGCATACTTGACAGCT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTLRGTS*SAYLTA
Trigger: AGCTGTCAAGTATGCTGACCAGGAGGTGCCACGAAG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCTTGAAAGGGCTTCGTaGCACCTCCTGGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTLERAS*HLLVSI
Trigger: TATGCTGACCAGGAGGTGCCACGAAGCCCTTTCAAG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGGATGTTGGCCTTCTTaGGTTTACCCTCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTGCWPS*VYPRDP
Trigger: TGGATCCCGAGGGTAAACCCAAGAAGGCCAACATCC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCAGGCACCCAGTCCATaGCCTCCAATGGACACTGTA +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDQAPSP*PPMDTV
Trigger: TACAGTGTCCATTGGAGGCCATGGACTGGGTGCCTG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCTCCGATCTGGATTCTaGGACCCAGGCAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVALRSGF*DPGRHP
Trigger: TGGGTGCCTGCCTGGGTCCCAGAATCCAGATCGGAG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCAGGTGCTACCAATGGTaGCAATGGAGGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRARCYQW*QWRVPV
Trigger: GACAGGCACCCTCCATTGCCACCATTGGTAGCACCT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCACAGGTGCTACCAATaGTGGCAATGGAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILHRCYQ*WQWRVP
Trigger: AGGCACCCTCCATTGCCACCATTGGTAGCACCTGTG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGCCTCTGGGCTCACCTaGACCTCAAAAGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSASGLT*TSKGLR
Trigger: CCGCAGTCCTTTTGAGGTTCAGGTGAGCCCAGAGGC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTTCAATCTTGGCTTGTaGGGGCCCCTCGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDFNLGL*GPLDGE
Trigger: TTCTCCATCGAGGGGCCCTCACAAGCCAAGATTGAA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGGTGACCATCGTAGGTaGTGTCCACCTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAGDHRR*CPPCKV
Trigger: GACCTTACAAGGTGGACATCACCTACGATGGTCACC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCAGGCCCAGAGACCTTaGTGCCACTGGTATCAACTG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFQAQRP*CHWYQL
Trigger: CAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCCTGGTTTCCACAGTaGAGCGGTTGGCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPWFPQ*SGWPCS
Trigger: TGAACAAGGCCAACCGCTTCACTGTGGAAACCAGGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCCTTGTTGTCAGTaGTGTTGGGGCGCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWHPCCQ*CWGALF
Trigger: AAACAGCGCGCCCCAACATCACTGACAACAAGGATG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCGTCAAAGCGCACGATaGTGCTGTAGTCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVARQSAR*CCSLRV
Trigger: CACCCGGAGACTACAGCATCATCGTGCGCTTTGACG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTGGGCAGACACCATCTaGAACCAGTTTCCTGGGATC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDWADTI*NQFPGI
Trigger: GATCCCAGGAAACTGGTTTCAGATGGTGTCTGCCCA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCAGTCATCAGCTTGCTaGATGGCCTCTCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAQSSAC*MASLAF
Trigger: GAATGCCAGAGAGGCCATGCAGCAAGCTGATGACTG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTCCCCTGGGGCTCAATaGCAGGCCCATAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSSPGAQ*QAHRQW
Trigger: CCATTGCCTATGGGCCTGGCATTGAGCCCCAGGGGA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGTGAAGTGGGCAGGCTaGAGCACAGTGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHVKWAG*STVFPW
Trigger: CCAGGGGAACACTGTGCTGCAGCCTGCCCACTTCAC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCAGCATCTACTGTCTaGACGGTGAAGTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPASTV*TVKWAG
Trigger: GCCTGCCCACTTCACCGTGCAGACAGTAGATGCTGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCATCCCCGAGAGCCATaGCCACATTCACCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACHPREP*PHSPQR
Trigger: CCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCGGGGTTACAGGCTTCTaGCACATGGACAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFGVTGF*HMDRER
Trigger: CCTTTCCCTGTCCATGTGGCAGAAGCCTGTAACCCC...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTCATCGCAGATGACATaGACAGCATACTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDSSQMT*TAYSPG
Trigger: GCCTGGGGAGTATGCTGTGCATGTCATCTGCGATGA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGTCATCGCAGATGACATaGACAGCATACTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWSSQMT*TAYSPG
Trigger: GCCTGGGGAGTATGCTGTGCATGTCATCTGCGATGA...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCTTCAAATCTCCCTTaGCAGCAGCACGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWASNLP*QQHGHQ
Trigger: TTGATGCCCGTGCTGCTGGCAAGGGAGATTTGAAGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGGGCAGGTAGCTGACTaGACAAGATCCGTCACCATT +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAGQVAD*TRSVTI
Trigger: AATGGTGACGGATCTTGTGCAGTCAGCTACCTGCCC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCTTCCCCTTGCCTGCTaGCTTGGCGTCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHILPLAC*LGVHCD
Trigger: ATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGTCCACAATGAACTCTaGCACTTGGAAGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLVHNEL*HLEGLS
Trigger: GGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGAC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTCCCTCAACGATCTCTaGGGCTTCTGTCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDSLNDL*GFCLAR
Trigger: TCTGGCAAGACAGAAGCCGCAGAGATCGTTGAGGGA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGAATCGCACACTGTATaGGCTGTCTTCTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVESHTV*AVFSLN
Trigger: GTTGAGGGAGAAGACAGCGCATACAGTGTGCGATTC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACATCAATCACACCACGTaGCCCATTAAGCTGCACCGC +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDINHTT*PIKLHR
Trigger: GCGGTGCAGCTTAATGGGGCACGTGGTGTGATTGAT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTCCCCAGCCTGGCTCTaGTCCCCAACACGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSSPAWL*SPTRIL
Trigger: CAAGATCCGTGTTGGGGAGCAGAGCCAGGCTGGGGA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGGGGCACTTTGTTCTaGATCCAGCCAAGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFWGTLF*IQPSSR
Trigger: GCGACTGCTTGGCTGGATCCAGAACAAAGTGCCCCA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGCTGCATGGCCTCTCTaGCATTCTGCACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSAAWPL*HSARAG
Trigger: ACCAGCCCGTGCAGAATGCCAGAGAGGCCATGCAGC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTAACCCAGCAACCTTaGGCACATAGGAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAVTQQP*AHRRRH
Trigger: ATGCCGTCTCCTATGTGCCCAAGGTTGCTGGGTTAC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCTCCCGAACTTTCACTaGCTCCTCTGTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGLPNFH*LLCALW
Trigger: CCAAAGGGCACAGAGGAGCCAGTGAAAGTTCGGGAG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGCTTTCACCTTGTCTaGGAAGCAGTCTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFCFHLV*EAVWWG
Trigger: GCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCCACTATGCAGCCAGTaGGCTCCAGGCCAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSPLCSQ*APGQVQ
Trigger: TTGGACCTGGCCTGGAGCCCACTGGCTGCATAGTGG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTTCACCCGCTCAGGATaGCTGCCTTCTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFFTRSG*LPSPTF
Trigger: GAATGTGGGAGAAGGCAGCCATCCTGAGCGGGTGAA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCTAGCGTCATGGGATaGGTCCACCTTGATGTGGAA +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWASVMG*VHLDVE
Trigger: TTCCACATCAAGGTGGACCCATCCCATGACGCTAGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGGTGTCAATGGAGAATaGTGCCGGGGTGCCTACAAG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACGVNGE*CRGAYK
Trigger: CTTGTAGGCACCCCGGCACCATTCTCCATTGACACC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCTTGGCACTCGATCTTaGCTTCGCAGGGGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSLGTRS*LRRGPR
Trigger: TCGAGGGCCCCTGCGAAGCCAAGATCGAGTGCCAAG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTCCGCGTTGTTTTaGATCAGCACCTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPSALF*ISTSAL
Trigger: CAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATACTGCAGGCTGCACGTaGACACGGGTGGGGAACTTG +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHTAGCT*TRVGNL
Trigger: CAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCTTGAAAGGGCTTCGTaGCACCTCCTGGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLERAS*HLLVSI
Trigger: TATGCTGACCAGGAGGTGCCACGAAGCCCTTTCAAG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCTCCGATCTGGATTCTaGGACCCAGGCAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHLRSGF*DPGRHP
Trigger: TGGGTGCCTGCCTGGGTCCCAGAATCCAGATCGGAG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTACTTGATCCCCATCTaGTGCAGGCCCTTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAYLIPI*CRPFSV
Trigger: GACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTA...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGACTCGAACTTTGCTaGCATCCCCGATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDRLELC*HPRSPK
Trigger: CTTCGGAGATCGGGGATGCCAGCAAAGTTCGAGTCT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCTACCAATGGTGGCAATaGAGGGTGCCTGTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIYQWWQ*RVPVCA
Trigger: GGCGCAGACAGGCACCCTCCATTGCCACCATTGGTA...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGAGGTGCTACCAATGGTaGCAATGGAGGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGRCYQW*QWRVPV
Trigger: GACAGGCACCCTCCATTGCCACCATTGGTAGCACCT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCAGCTCGCACCTTGTaGGCACCACCTTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPARTL*APPSPS
Trigger: GCTAGGTGAAGGTGGTGCCCACAAGGTGCGAGCTGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCAATCTCTGCCTTGCTaGGACCTTCCACAGCGATGG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACQSLPC*DLPQRW
Trigger: CCATCGCTGTGGAAGGTCCCAGCAAGGCAGAGATTG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCCACCATCATCATGTTaGTGCCTGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTPPSSC*CLLCCS
Trigger: ACTGCAGCAAAGCAGGCACCAACATGATGATGGTGG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCGTTGGGGATCACCTTaGTGTCGATGGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSRWGSP*CRWGSH
Trigger: ATGGCTGCCCCATCGACATCAAGGTGATCCCCAACG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCACTGCAGTCCACTGTaGAATAGGTGGGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWHCSPL*NRWVHW
Trigger: CCAATGAACCCACCTATTTCACAGTGGACTGCAGTG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCATCCTTGTTGTCAGTaGTGTTGGGGCGCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFHPCCQ*CWGALF
Trigger: AAACAGCGCGCCCCAACATCACTGACAACAAGGATG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCTGTCTGCGCCGAGTaGTGCTTTCCTTCATGCGTC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPVCAE*CFPSCV
Trigger: GACGCATGAAGGAAAGCATCACTCGGCGCAGACAGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCACTCCGGGTGATGGGTaGACCAGCAAAGGCCACATG +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSTPGDG*TSKGHM
Trigger: CATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGT...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGCCACTGGTATCAACTaGAGGCTGCACGTGGACACG +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHATGIN*RLHVDT
Trigger: CGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCACTGGCCCGCACTTTaGTGGCATCATGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIHWPAL*WHHGME
Trigger: TTCCATCCCATGATGCCAGCAAAGTGCGGGCCAGTG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTCGGGATCCAGGATCTaGACGGTAAGAAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHSGSRI*TVRSPC
Trigger: GCAGGGGCTTCTTACCGTGCAGATCCTGGATCCCGA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTAGGACACAGTATATGTaGCATCCCCATTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTRTQYM*HPHCLG
Trigger: TCCGAGACAATGGGGATGGCACATATACTGTGTCCT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCTTCCCCTTGCCTGCTaGCTTGGCGTCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSLPLAC*LGVHCD
Trigger: ATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGTCCACATCGAGCTCTaGCCCATCGGGTGTGGATAC +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSVHIEL*PIGCGY
Trigger: GTATCCACACCCGATGGGGCAGAGCTCGATGTGGAC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTAGTAGATGTCGAAGGTaGCATCATGGTTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSRCRR*HHGSRP
Trigger: TGGTCGAGAACCATGATGGCACCTTCGACATCTACT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCATCATCATGTTGGTaGCTGCTTTGCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPSSCW*LLCCSP
Trigger: TGGACTGCAGCAAAGCAGGCACCAACATGATGATGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCACATGGGCATGGAAATaGAGTAGTGAAGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVTWAWK*SSEGSA
Trigger: CGCTGATCCTTCACTACTCCATTTCCATGCCCATGT...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCAAGCAGTCGCTGCTTaGGTGTCTGTTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHIQAVAA*VSVCGH
Trigger: ATGCCCGCAAACAGACACCCAAGCAGCGACTGCTTG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCAGGCTTCTGCCACATaGACAGGGAAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSQASAT*TGKGLR
Trigger: CCGGAGTCCTTTCCCTGTCCATGTGGCAGAAGCCTG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCAGGCTTCTGCCACATaGACAGGGAAAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHQASAT*TGKGLR
Trigger: CCGGAGTCCTTTCCCTGTCCATGTGGCAGAAGCCTG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCTCCCGAACTTTCACTaGCTCCTCTGTGCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHILPNFH*LLCALW
Trigger: CCAAAGGGCACAGAGGAGCCAGTGAAAGTTCGGGAG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCTGCTTTCACCTTGTCTaGGAAGCAGTCTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHICFHLV*EAVWWG
Trigger: GCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCA...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCACAAAGGGACTTTTaGGGACAGGGTCCCCACCGT +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPQRDF*GQGPHR
Trigger: ACGGTGGGGACCCTGTCCCCAAAAGTCCCTTTGTGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTATAGGGACCATCAGTaGCAGGTGTGTAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAYRDHQ*QVCSGQ
Trigger: CTGTCCACTACACACCTGCCACTGATGGTCCCTATA...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCATTGTCTCGGATGTTaGCCTTCTTGGGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTHCLGC*PSWVYP
Trigger: AGGGTAAACCCAAGAAGGCCAACATCCGAGACAATG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCAGACTCGAACTTTGCTaGCATCCCCGATCTCCGAAG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACRLELC*HPRSPK
Trigger: CTTCGGAGATCGGGGATGCCAGCAAAGTTCGAGTCT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTACCAATGGTGGCAATaGAGGGTGCCTGTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHYQWWQ*RVPVCA
Trigger: GGCGCAGACAGGCACCCTCCATTGCCACCATTGGTA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCACTGCAGTCCACTGTaGAATAGGTGGGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFHCSPL*NRWVHW
Trigger: CCAATGAACCCACCTATTTCACAGTGGACTGCAGTG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCAGCAAACAGGATATTaGTGGTGTACTCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGQQTGY*WCTRLA
Trigger: AGCCAGGCGAGTACACCATCAATATCCTGTTTGCTG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCTGGTCAGCATACTTaGCAGCTACAGTATAGGGAC +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPGQHT*QLQYRD
Trigger: GTCCCTATACTGTAGCTGTCAAGTATGCTGACCAGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGAACTTGACATCAATTaGGTGGACACCGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVELDIN*VDTVLM
Trigger: CATGAGAACGGTGTCCACTCAATTGATGTCAAGTTC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGCTTGGGTGTCTGTTTaGGGGCATCCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACAWVSV*GHPHHL
Trigger: AAGATGATGAGGATGCCCGCAAACAGACACCCAAGC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCATCCCCGAGAGCCATaGCCACATTCACCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSHPREP*PHSPQR
Trigger: CCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCTCAAATGCAATCTCTaGCTTGCTGGGACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGLKCNL*LAGTFH
Trigger: GTGGAAGGTCCCAGCAAGGCAGAGATTGCATTTGAG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCTCAAATGCAATCTCTaGCTTGCTGGGACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACLKCNL*LAGTFH
Trigger: GTGGAAGGTCCCAGCAAGGCAGAGATTGCATTTGAG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTTTGCGGTCCTCAAATaGAATCTCTGCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFFAVLK*NLCLAG
Trigger: CCCAGCAAGGCAGAGATTGCATTTGAGGACCGCAAA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGACCCGGTTTCCCATGTaGTTCACATATACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWTRFPM*FTYTSS
Trigger: CGAAGAGGTATATGTGAAGCACATGGGAAACCGGGT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTTTTCCAGCTTCATTTaGCGGAAGTTGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSFSSFI*RKLGRG
Trigger: CCCGCGCCCCAACTTCCGCCAAATGAAGCTGGAAAA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCTTCCCAGGTACCACTaGGTAGTACTCGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVALPRYH*VVLALE
Trigger: TTCGAGTGCGAGTACTACCCAGTGGTACCTGGGAAG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCATCACATTCAATCTTaGCTTGTGAGGGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFHHIQS*LVRAPR
Trigger: TCGAGGGGCCCTCACAAGCCAAGATTGAATGTGATG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTTCACCCGCTCAGGATaGCTGCCTTCTCCCACATTC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSFTRSG*LPSPTF
Trigger: GAATGTGGGAGAAGGCAGCCATCCTGAGCGGGTGAA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCTTGCTAGCGTCATaGGATGGGTCCACCTTGATG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVATLLAS*DGSTLM
Trigger: CATCAAGGTGGACCCATCCCATGACGCTAGCAAGGT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTTTGCTGAGGTCCAGTaGGGGTGCCACATTCACCAC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSFAEVQ*GCHIHH
Trigger: GTGGTGAATGTGGCACCCCCACTGGACCTCAGCAAA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACACGAGCTGTCACATaGTTGCCGCCTGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVATRAVT*LPPVAV
Trigger: AACAGCTACAGGCGGCAACCATGTGACAGCTCGTGT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCTCGGAAGGGGCTCTTaGGCACAGCTACTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSLGRGS*AQLLRH
Trigger: ATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCTCGGAAGGGGCTCTTaGGCACAGCTACTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSLGRGS*AQLLRH
Trigger: ATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTATAGGGACCATCAGTaGCAGGTGTGTAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACYRDHQ*QVCSGQ
Trigger: CTGTCCACTACACACCTGCCACTGATGGTCCCTATA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGCTGGCATCATGGGATaGAAGCACTTTGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTAGIMG*KHFDLE
Trigger: TTCAAGATCAAAGTGCTTCCATCCCATGATGCCAGC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGGATGTTGGCCTTCTTaGGTTTACCCTCGGGATCCA +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAGCWPS*VYPRDP
Trigger: TGGATCCCGAGGGTAAACCCAAGAAGGCCAACATCC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCATGAACTCTGCCACTTaGAAGGTTTGTCCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAMNSAT*KVCPSE
Trigger: TTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCAT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCAATCTCTGCCTTGCTaGGACCTTCCACAGCGATGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSQSLPC*DLPQRW
Trigger: CCATCGCTGTGGAAGGTCCCAGCAAGGCAGAGATTG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTTGACATCAATTGAGTaGACACCGTTCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLTSIE*TPFSWG
Trigger: CCCCCATGAGAACGGTGTCCACTCAATTGATGTCAA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCCTGAGCCTGCATTCTaGGTGTTCACAATAAACTCT +
Preference number: 4 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVPEPAF*VFTINS
Trigger: AGAGTTTATTGTGAACACCCAGAATGCAGGCTCAGG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAGTCATGGTTGTCAATaGTTTCAAAGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWSHGCQ*FQSPAQ
Trigger: CTGTGCGGGACTTTGAAATCATTGACAACCATGACT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTTGCTGTTGAGGCCTTaGACTTTGACTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGLLLRP*TLTLLR
Trigger: CCTCAGCAAAGTCAAAGTTCAAGGCCTCAACAGCAA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGGTGACCATCGTAGGTaGTGTCCACCTTGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSGDHRR*CPPCKV
Trigger: GACCTTACAAGGTGGACATCACCTACGATGGTCACC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGAACTTGACATCAATTaGGTGGACACCGTTCTCATG +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWELDIN*VDTVLM
Trigger: CATGAGAACGGTGTCCACTCAATTGATGTCAAGTTC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGCTTGGGTGTCTGTTTaGGGGCATCCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAAWVSV*GHPHHL
Trigger: AAGATGATGAGGATGCCCGCAAACAGACACCCAAGC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCAGTCATCAGCTTGCTaGATGGCCTCTCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSQSSAC*MASLAF
Trigger: GAATGCCAGAGAGGCCATGCAGCAAGCTGATGACTG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTTCTTAGGATTCAGCTaGTTAGAGCGAACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACFLGFS*LERTGA
Trigger: TGCCCCTGTTCGCTCTAAGCAGCTGAATCCTAAGAA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGCTTCAAATCTCCCTTaGCAGCAGCACGGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHASNLP*QQHGHQ
Trigger: TTGATGCCCGTGCTGCTGGCAAGGGAGATTTGAAGC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGTAGGTCACTGTTACTaGCATGTTGCCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSVGHCY*HVALLH
Trigger: GTGCAGCAGGGCAACATGGCAGTAACAGTGACCTAC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCAGGACACAGTATATGTaGCATCCCCATTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACRTQYM*HPHCLG
Trigger: TCCGAGACAATGGGGATGGCACATATACTGTGTCCT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGAATCGCACACTGTATaGGCTGTCTTCTCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAESHTV*AVFSLN
Trigger: GTTGAGGGAGAAGACAGCGCATACAGTGTGCGATTC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTTTGCGGTCCTCAAATaGAATCTCTGCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAFAVLK*NLCLAG
Trigger: CCCAGCAAGGCAGAGATTGCATTTGAGGACCGCAAA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCACAAGAACCATCTTTaGGGTCCTCAAATGCAATCT +
Preference number: 4 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTHKNHL*GPQMQS
Trigger: AGATTGCATTTGAGGACCGCAAAGATGGTTCTTGTG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCATCATGTTGGTGCCTaGTTTGCTGCAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSHHVGA*FAAVHG
Trigger: ACCGTGGACTGCAGCAAAGCAGGCACCAACATGATG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCACCCGGTTTCCCATGTaGTTCACATATACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACTRFPM*FTYTSS
Trigger: CGAAGAGGTATATGTGAAGCACATGGGAAACCGGGT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGTAACCCAGCAACCTTaGGCACATAGGAGACGGCAT +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHVTQQP*AHRRRH
Trigger: ATGCCGTCTCCTATGTGCCCAAGGTTGCTGGGTTAC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCTTCCCAGGTACCACTaGGTAGTACTCGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSLPRYH*VVLALE
Trigger: TTCGAGTGCGAGTACTACCCAGTGGTACCTGGGAAG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCTGGCAGGGATCTCCTaGTTGGCAAACAACACCATG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSLAGIS*LANNTM
Trigger: CATGGTGTTGTTTGCCAACCAGGAGATCCCTGCCAG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGCTAGCGTCATGGGATaGGTCCACCTTGATGTGGAA +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSASVMG*VHLDVE
Trigger: TTCCACATCAAGGTGGACCCATCCCATGACGCTAGC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGCTGGCATCATGGGATaGAAGCACTTTGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LLFLFQALHSRAVATRRAAGIMG*KHFDLE
Trigger: TTCAAGATCAAAGTGCTTCCATCCCATGATGCCAGC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCATGAACTCTGCCACTTaGAAGGTTTGTCCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFMNSAT*KVCPSE
Trigger: TTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCAT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCTGAAACCAGTTTCCTaGGATCTTGAGGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AVCEGDFSLTQILQLSACLKPVS*DLEVEV
Trigger: GACCTCAACCTCAAGATCCCAGGAAACTGGTTTCAG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTTAAGCCCTGTCTCCTaGAGGCTGGTAACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSLSPVS*RLVTVR
Trigger: CCTCACTGTTACCAGCCTCCAGGAGACAGGGCTTAA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGAGTCATGGTTGTCAATaGTTTCAAAGTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGSHGCQ*FQSPAQ
Trigger: CTGTGCGGGACTTTGAAATCATTGACAACCATGACT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGTGCGTATCTCACTGTaGTGGTTCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAVRISL*WFHPCC
Trigger: ACAACAAGGATGGAACCATCACAGTGAGATACGCAC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTTCTTAGGATTCAGCTaGTTAGAGCGAACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAFLGFS*LERTGA
Trigger: TGCCCCTGTTCGCTCTAAGCAGCTGAATCCTAAGAA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGTCCACAATGAACTCTaGCACTTGGAAGGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAVHNEL*HLEGLS
Trigger: GGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGAC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCACAAGAACCATCTTTaGGGTCCTCAAATGCAATCT +
Preference number: 4 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWHKNHL*GPQMQS
Trigger: AGATTGCATTTGAGGACCGCAAAGATGGTTCTTGTG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCACATGGGCATGGAAATaGAGTAGTGAAGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: KIVREISSLGGLARAEHITWAWK*SSEGSA
Trigger: CGCTGATCCTTCACTACTCCATTTCCATGCCCATGT...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGTAGGTGGGTTTGTTaGCCACGTTACCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSSRWVC*PRYPQV
Trigger: AACCTGTGGGTAACGTGGCCAACAAACCCACCTACT...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCATCACATTCAATCTTaGCTTGTGAGGGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSHHIQS*LVRAPR
Trigger: TCGAGGGGCCCTCACAAGCCAAGATTGAATGTGATG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCATTGTCTCGGATGTTaGCCTTCTTGGGTTTACCCT +
Preference number: 4 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAHCLGC*PSWVYP
Trigger: AGGGTAAACCCAAGAAGGCCAACATCCGAGACAATG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCCACCATCATCATGTTaGTGCCTGCTTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSPPSSC*CLLCCS
Trigger: ACTGCAGCAAAGCAGGCACCAACATGATGATGGTGG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTTGCTGTTGAGGCCTTaGACTTTGACTTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSLLLRP*TLTLLR
Trigger: CCTCAGCAAAGTCAAAGTTCAAGGCCTCAACAGCAA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATGTGCGTATCTCACTGTaGTGGTTCCATCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHVRISL*WFHPCC
Trigger: ACAACAAGGATGGAACCATCACAGTGAGATACGCAC...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATAGTAGATGTCGAAGGTaGCATCATGGTTCTCGACCA +
Preference number: 4 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHSRCRR*HHGSRP
Trigger: TGGTCGAGAACCATGATGGCACCTTCGACATCTACT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTTGACATCAATTGAGTaGACACCGTTCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSLTSIE*TPFSWG
Trigger: CCCCCATGAGAACGGTGTCCACTCAATTGATGTCAA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR GCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGGGCTTCCAGGTACGTaGTTGTCAGCAAACTTAATA +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSGLPGT*LSANLI
Trigger: TATTAAGTTTGCTGACAAGCACGTACCTGGAAGCCC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CCA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCCTGAGCCTGCATTCTaGGTGTTCACAATAAACTCT +
Preference number: 4 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSPEPAF*VFTINS
Trigger: AGAGTTTATTGTGAACACCCAGAATGCAGGCTCAGG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCGTACTTGACAGTGTATaGATAGTCATGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFVLDSV*IVMVVN
Trigger: ATTGACAACCATGACTATTCATACACTGTCAAGTAC...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR TCA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCGTACTTGACAGTGTATaGATAGTCATGGTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSVLDSV*IVMVVN
Trigger: ATTGACAACCATGACTATTCATACACTGTCAAGTAC...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp AGCCTTGCCACGCTCCAGGCCTGGCCCACTGGCCCTCACCTTGCTTaGGTCGAACACAGGCTGGATGGTGGCCTTGAAGGGCGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLATLQAWPTGPHLA*VEHRLDGGLEGRAR
Trigger: CCTGGCTCGCCCTTCAAGGCCACCATCCAGCCTGTGTTCGACCCAAGCAAGGTGAGGGCCAGTGGGCCAGGCCTGGAGCGTGGCAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp TCACCAAGCCACCTTCCAGACCTGGCCCGAAGGCCCGGACTCGGGTaGGGTCACAGCCCTCAGTCACACCCACTCGGAAGGGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: SPSHLPDLARRPGLG*GHSPQSHPLGRGSW
Trigger: CCAAGAGCCCCTTCCGAGTGGGTGTGACTGAGGGCTGTGACCCCACCCGAGTCCGGGCCTTCGGGCCAGGTCTGGAAGGTGGCTTGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp TCAGCATGGATTCCAGAGGCTCCACAGGCACCACGGGCTCCTCTGTaGCCCAGTGCGTGGGGCAGGTGCCAGGCCGAAGAGGGGCATAGG +
Preference number: 5 (lower is better)
Translates to: SAWIPEAPQAPRAPL*PSAWGRCQAEEGHR
Trigger: CCTATGCCCCTCTTCGGCCTGGCACCTGCCCCACGCACTGGGCCACAGAGGAGCCCGTGGTGCCTGTGGAGCCTCTGGAATCCATGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065090.8
CDS GCA 90 bp ACAGGGAAAGGACTCCGGGTGATGGGTGCACCAGCAAAGGCCACATaGACGGTGTGTGGCCCCTCCATCACGGGCCTGTACGTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TGKGLRVMGAPAKAT*TVCGPSITGLYVQR
Trigger: CCGCTGCACGTACAGGCCCGTGATGGAGGGGCCACACACCGTGCATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGTCCTTTCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CACAGTGAAGCGGTTGGCCTTGTTCACCAAGCCACCTTCCAGACCTaGCCCGAAGGCCCGGACTCGGGTGGGGTCACAGCCCTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: HSEAVGLVHQATFQT*PEGPDSGGVTALSH
Trigger: GTGACTGAGGGCTGTGACCCCACCCGAGTCCGGGCCTTCGGGCCAGGTCTGGAAGGTGGCTTGGTGAACAAGGCCAACCGCTTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGGCTGGATGGTGGCCTaGAAGGGCGAGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDGWMVA*KGEPGM
Trigger: CATCCCTGGCTCGCCCTTCAAGGCCACCATCCAGCC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCAGGTGATCTCCGCCTaGGATGGGCCCTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDQVISA*DGPSTA
Trigger: GGCTGTGGAGGGCCCATCCAAGGCGGAGATCACCTG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp CCTCCCGCAGGACACCATGTGGCTCCACACCAGGCCCAGAGACCTTaGTGCCACTGGTATCAACTGCAGGCTGCACGTGGACACGGGTGG +
Preference number: 5 (lower is better)
Translates to: PPAGHHVAPHQAQRP*CHWYQLQAARGHGW
Trigger: CCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGGTGTGGAGCCACATGGTGTCCTGCGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp CCCCGAGTCTTGCTGATCTCTGTCCGCTCTGTGCGGGTGTACGTATaGCTGCTCCGCGTGAAGGTGCGAGTCAGGCGCTCCTGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PRVLLISVRSVRVYV*LLRVKVRVRRSWAD
Trigger: GTCTGCCCAGGAGCGCCTGACTCGCACCTTCACGCGGAGCAGTCATACGTACACCCGCACAGAGCGGACAGAGATCAGCAAGACTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCACGGGCTGATACCTaGTTGGCATCCCCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPRADT*LASPRA
Trigger: GGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp CCTCCACTCGGACTTCACGCTTGGTCTCCCCACCCCGAGTCTTGCTaGTCTCTGTCCGCTCTGTGCGGGTGTACGTATGACTGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: PPLGLHAWSPHPESC*SLSALCGCTYDCSA
Trigger: CGCGGAGCAGTCATACGTACACCCGCACAGAGCGGACAGAGATCAGCAAGACTCGGGGTGGGGAGACCAAGCGTGAAGTCCGAGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp ACACCAGGCCCAGAGACCTTGATGCCACTGGTATCAACTGCAGGCTaGACGTGGACACGGGTGGGGAACTTGGGTATGGGGTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: TPGPETLMPLVSTAG*TWTRVGNLGMGWPP
Trigger: TGGCGGCCACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GTGCGGCTCAGCCCAGGACCCTCAGCCTTGACCTTGCTAGCGTCATaGGATGGGTCCACCTTGATGTGGAAGGGACTGGCAGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VRLSPGPSALTLLAS*DGSTLMWKGLAGIS
Trigger: GGAGATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCATGACGCTAGCAAGGTCAAGGCTGAGGGTCCTGGGCTGAGCCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATAGGTCGGTCAGGCGCTaGCCCACACACTTGAGATGC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDRSVRR*PTHLRC
Trigger: GCATCTCAAGTGTGTGGGCAAGCGCCTGACCGACCT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCTTTGACGGTGACCTaGAGTTCCCCGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPLTVT*SSPLPA
Trigger: TGCTGGCAGCGGGGAACTCAAGGTCACCGTCAAAGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATACGTCCAGCTTAGCCTaGCCAGCTCCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDTSSLA*PAPLVS
Trigger: GCTGACCAAGGGAGCTGGCAAGGCTAAGCTGGACGT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATACCACAAAGGGACTTTaGGGGACAGGGTCCCCACCG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDTTKGL*GTGSPP
Trigger: CGGTGGGGACCCTGTCCCCAAAAGTCCCTTTGTGGT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCTGCCTCTCCAGCCTaGCCACGCTCCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWAASPA*PRSRPG
Trigger: GCCAGGCCTGGAGCGTGGCAAGGCTGGAGAGGCAGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCGGGATGCCCGAGGCATaGAGGCCAGGGCCACTGGCC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILGMPEA*RPGPLA
Trigger: GGCCAGTGGCCCTGGCCTCAATGCCTCGGGCATCCC...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGGGATGCCCGAGGCATaGAGGCCAGGGCCACTGGCC +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDGMPEA*RPGPLA
Trigger: GGCCAGTGGCCCTGGCCTCAATGCCTCGGGCATCCC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCAGGTGATCTCCGCCTaGGATGGGCCCTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLQVISA*DGPSTA
Trigger: GGCTGTGGAGGGCCCATCCAAGGCGGAGATCACCTG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp TGGGGTTACAGGCTTCTGCCACATGGACAGGGAAAGGACTCCGGGTaGTGGGTGCACCAGCAAAGGCCACATGCACGGTGTGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: WGYRLLPHGQGKDSG*WVHQQRPHARCVAP
Trigger: AGGGGCCACACACCGTGCATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGTCCTTTCCCTGTCCATGTGGCAGAAGCCTGTAACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp ATAGGCCGTCGGGAGGGTGAGGTCATCCGCACATCGAGTTGTCCCTaGCCACCAGCCCCTCTGGTGTTCACCGAGAACGCCTGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: IGRREGEVIRTSSCP*PPAPLVFTENACSC
Trigger: ACAGGAACAGGCGTTCTCGGTGAACACCAGAGGGGCTGGTGGTCAGGGACAACTCGATGTGCGGATGACCTCACCCTCCCGACGGCCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp TGGCTCCACACCAGGCCCAGAGACCTTGATGCCACTGGTATCAACTaGAGGCTGCACGTGGACACGGGTGGGGAACTTGGGTATGGGGTG +
Preference number: 5 (lower is better)
Translates to: WLHTRPRDLDATGIN*RLHVDTGGELGYGV
Trigger: CACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGGTGTGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp GGGCTGTTGGTGACGTGCTTGCCACTCTTGCGCACGCTCACCACGTaGTCACCGACCTCCTTGGGGGTAAAGGAGATCCCAATGTGCCTG +
Preference number: 5 (lower is better)
Translates to: GLLVTCLPLLRTLTT*SPTSLGVKEIPMCL
Trigger: CAGGCACATTGGGATCTCCTTTACCCCCAAGGAGGTCGGTGAGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACGTCACCAACAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GCAGCCAGTGGGCTCCAGGCCAGGTCCAAATGCTTTCACCTTGTCTaGGAAGCAGTCTGGTGGGGCTGGCTGGATGTGGGCGATGAAAGG +
Preference number: 5 (lower is better)
Translates to: AASGLQARSKCFHLV*EAVWWGWLDVGDER
Trigger: CCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCATTTGGACCTGGCCTGGAGCCCACTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GGCCCAGAGACCTTGATGCCACTGGTATCAACTGCAGGCTGCACGTaGACACGGGTGGGGAACTTGGGTATGGGGTGGCCGCCATACTTG +
Preference number: 5 (lower is better)
Translates to: GPETLMPLVSTAGCT*TRVGNLGMGWPPYL
Trigger: CAAGTATGGCGGCCACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGGGCACCCAGAGCCTaGCCGTCCTGCCAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDRAPRA*PSCQSR
Trigger: CCGAGACTGGCAGGACGGCAAGGCTCTGGGTGCCCT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGAGGCTCTGCAGGCGTaGGGGTTACAGGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLEALQA*GLQASA
Trigger: GGCAGAAGCCTGTAACCCCAACGCCTGCAGAGCCTC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGACGAAGTCAGCCGACTaGCCCACCTGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLTKSAD*PTWPVS
Trigger: GGAGACTGGCCAGGTGGGCAAGTCGGCTGACTTCGT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGGGCTCTTAGGCACGTaGACACCTCCCCAGGAGACG +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLGLLGT*TPPQET
Trigger: CGTCTCCTGGGGAGGTGTCAACGTGCCTAAGAGCCC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCCCCAGGCTCCAGCTaGCAGGGGATAGGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACPPGSS*QGIGRR
Trigger: CCGACGGCCTATCCCCTGCAAGCTGGAGCCTGGGGG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGCTGCCTCTCCAGCCTaGCCACGCTCCAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGAASPA*PRSRPG
Trigger: GCCAGGCCTGGAGCGTGGCAAGGCTGGAGAGGCAGC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCACACGGGTGGGGAACTaGGGTATGGGGTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVTRVGN*GMGWPP
Trigger: TGGCGGCCACCCCATACCCAAGTTCCCCACCCGTGT...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCCTCGGAAAGGCCTTaGCCCCAGACTCGAACTTTG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPSERP*PQTRTL
Trigger: CAAAGTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGCTTCCGGGCACGTGTaGGCCGCGGTACTTGACAGT +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLASGHV*AAVLDS
Trigger: ACTGTCAAGTACCGCGGCCAACACGTGCCCGGAAGC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp TGTGGTAGGTGCCGTCCGCGTTGTTTTGGATCAGCACCTCCGCTTTaGCACCAGCGTCCGACAGGATCTCGATGGTCAGCTCGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: CGRCRPRCFGSAPPL*HQRPTGSRWSARPH
Trigger: GTGAGGCCGAGCTGACCATCGAGATCCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGCACCTACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp GACCAGGGCCACGGGCTGATACCTTGTTGGCATCCCCGAGAGCCATaGCCACATTCACCTCAAAGGGACTACGCTCGATGTTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: DQGHGLIPCWHPREP*PHSPQRDYARCSGQ
Trigger: CTGGCCAGAACATCGAGCGTAGTCCCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp ATTTCAAAGTCCCGCACAGCCTCGCCCTTGGCTGCCCCAGCAAAGTaGACGTCCAGCTTAGCCTTGCCAGCTCCCTTGGTCAGCACGGTA +
Preference number: 5 (lower is better)
Translates to: ISKSRTASPLAAPAK*TSSLALPAPLVSTV
Trigger: TACCGTGCTGACCAAGGGAGCTGGCAAGGCTAAGCTGGACGTGCACTTTGCTGGGGCAGCCAAGGGCGAGGCTGTGCGGGACTTTGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp TGCCCCATCGGGTGTGGATACTGTGCAGGTCACCTTCCCCTTGCCTaGTGCCTTGGCGTCCACTGTGATCACAGTCTCCTCTCCGATCTG +
Preference number: 5 (lower is better)
Translates to: CPIGCGYCAGHLPLA*CLGVHCDHSLLSDL
Trigger: CAGATCGGAGAGGAGACTGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACACCCGATGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CAGGCCAGGTCCAAATGCTTTCACCTTGTCTGGGAAGCAGTCTGGTaGGGCTGGCTGGATGTGGGCGATGAAAGGCGAGTCCCGGATGTC +
Preference number: 5 (lower is better)
Translates to: QARSKCFHLVWEAVW*GWLDVGDERRVPDV
Trigger: GACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCATTTGGACCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GTGAGGTCATCCGCACATCGAGTTGTCCCTGACCACCAGCCCCTCTaGTGTTCACCGAGAACGCCTGTTCCTGTCCCACAGCTACCTTGC +
Preference number: 5 (lower is better)
Translates to: VRSSAHRVVPDHQPL*CSPRTPVPVPQLPC
Trigger: GCAAGGTAGCTGTGGGACAGGAACAGGCGTTCTCGGTGAACACCAGAGGGGCTGGTGGTCAGGGACAACTCGATGTGCGGATGACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATATTTTCCAGCTTCATTaGGCGGAAGTTGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDIFQLH*AEVGAR
Trigger: CCGCGCCCCAACTTCCGCCAAATGAAGCTGGAAAAT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAGGGCACCCAGAGCCTaGCCGTCCTGCCAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFRAPRA*PSCQSR
Trigger: CCGAGACTGGCAGGACGGCAAGGCTCTGGGTGCCCT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGGGCTCTTAGGCACGTaGACACCTCCCCAGGAGACG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTGLLGT*TPPQET
Trigger: CGTCTCCTGGGGAGGTGTCAACGTGCCTAAGAGCCC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCCTCCAGCTCGCACCTaGTGGGCACCACCTTCACCT +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVPPART*WAPPSP
Trigger: AGGTGAAGGTGGTGCCCACAAGGTGCGAGCTGGAGG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp TTTGTTGGCCACGTTACCCACAGGTTCCAGACCAGGGCCACGGGCTaGTACCTTGTTGGCATCCCCGAGAGCCATGCCCACATTCACCTC +
Preference number: 5 (lower is better)
Translates to: FVGHVTHRFQTRATG*YLVGIPESHAHIHL
Trigger: GAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGTGGGTAACGTGGCCAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp GCACGTAGGAGCAGCGGAAGGTACCGTCACCGTTGGGGATCACCTTaGTGTCGATGGGGCAGCCATCTGCATCCTGGGCATAGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: ARRSSGRYRHRWGSP*CRWGSHLHPGHRAS
Trigger: TGAAGCTCTATGCCCAGGATGCAGATGGCTGCCCCATCGACATCAAGGTGATCCCCAACGGTGACGGTACCTTCCGCTGCTCCTACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp CCCATCGGGTGTGGATACTGTGCAGGTCACCTTCCCCTTGCCTGCTaGCTTGGCGTCCACTGTGATCACAGTCTCCTCTCCGATCTGGAT +
Preference number: 5 (lower is better)
Translates to: PIGCGYCAGHLPLAC*LGVHCDHSLLSDLD
Trigger: ATCCAGATCGGAGAGGAGACTGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACACCCGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp CTTGAGGTTGAGGTCACAGGTGCTACCAATGGTGGCAATGGAGGGTaGCTGTCTGCGCCGAGTGATGCTTTCCTTCATGCGTCCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LEVEVTGATNGGNGG*LSAPSDAFLHASLA
Trigger: GGCGAGGGACGCATGAAGGAAAGCATCACTCGGCGCAGACAGGCACCCTCCATTGCCACCATTGGTAGCACCTGTGACCTCAACCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp GACTGTGTGGGGACCCATCTCCTGGGGCACGAATCGCACACTGTATaGGCTGTCTTCTCCCTCAACGATCTCTGCGGCTTCTGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: DCVGTHLLGHESHTV*AVFSLNDLCGFCLA
Trigger: GGCAAGACAGAAGCCGCAGAGATCGTTGAGGGAGAAGACAGCGCATACAGTGTGCGATTCGTGCCCCAGGAGATGGGTCCCCACACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CGTTACCCACAGGTTCCAGACCAGGGCCACGGGCTGATACCTTGTTaGCATCCCCGAGAGCCATGCCCACATTCACCTCAAAGGGACTAC +
Preference number: 5 (lower is better)
Translates to: RYPQVPDQGHGLIPC*HPREPCPHSPQRDY
Trigger: GTAGTCCCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGTGGGTAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GGGTGGGGTCACAGCCCTCAGTCACACCCACTCGGAAGGGGCTCTTaGGCACAGCTACTTCGTCATACAGCACCTCTACCAAATGCACAC +
Preference number: 5 (lower is better)
Translates to: GWGHSPQSHPLGRGS*AQLLRHTAPLPNAH
Trigger: GTGTGCATTTGGTAGAGGTGCTGTATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGTGGGTGTGACTGAGGGCTGTGACCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGAGGCTCTGCAGGCGTaGGGGTTACAGGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAEALQA*GLQASA
Trigger: GGCAGAAGCCTGTAACCCCAACGCCTGCAGAGCCTC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCCTTGGTGAACACCTaGAAGTCAGCCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPLVNT*KSATSF
Trigger: GAAAGAGGTGGCTGACTTCAAGGTGTTCACCAAGGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCCGCACATCGAGTaGTCCCTGACCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWHPHIE*SLTTSP
Trigger: GGGGCTGGTGGTCAGGGACAACTCGATGTGCGGATG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCATCCGCACATCGAGTaGTCCCTGACCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILHPHIE*SLTTSP
Trigger: GGGGCTGGTGGTCAGGGACAACTCGATGTGCGGATG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCCCCAGGCTCCAGCTaGCAGGGGATAGGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPPGSS*QGIGRR
Trigger: CCGACGGCCTATCCCCTGCAAGCTGGAGCCTGGGGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGTCTTGGCACTCGATCTaGGCTTCGCAGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWSWHSI*ASQGPS
Trigger: CGAGGGCCCCTGCGAAGCCAAGATCGAGTGCCAAGA...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGGCTGGATGGTGGCCTaGAAGGGCGAGCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGGWMVA*KGEPGM
Trigger: CATCCCTGGCTCGCCCTTCAAGGCCACCATCCAGCC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGACACGGGTGGGGAACTaGGGTATGGGGTGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGTRVGN*GMGWPP
Trigger: TGGCGGCCACCCCATACCCAAGTTCCCCACCCGTGT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGTGAAGCGGTTGGCCTaGTTCACCAAGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLVKRLA*FTKPPS
Trigger: GGAAGGTGGCTTGGTGAACAAGGCCAACCGCTTCAC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCATTGTCTCGGATGTaGGCCTTCTTGGGTTTACCC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPLSRM*AFLGLP
Trigger: GGGTAAACCCAAGAAGGCCAACATCCGAGACAATGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCAGGTCACCTTCCCCTaGCCTGCTGCCTTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACQVTFP*PAALAS
Trigger: GGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGCTCCCAGGGATATGGTaGCCGTCGTACTTGATCCCC +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLLPGIW*PSYLIP
Trigger: GGGGATCAAGTACGACGGCAACCATATCCCTGGGAG...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATCCTTCCCCAGCATCCTaGGTGACAATTGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDPSPAS*VTIVKV
Trigger: CACCTTCACAATTGTCACCAAGGATGCTGGGGAAGG...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATATCTTAAAGGGGCTGTaGGTGACGTGCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDILKGL*VTCLPL
Trigger: GAGTGGCAAGCACGTCACCAACAGCCCCTTTAAGAT...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGGCTTCCGGGCACGTGTaGGCCGCGGTACTTGACAGT +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWASGHV*AAVLDS
Trigger: ACTGTCAAGTACCGCGGCCAACACGTGCCCGGAAGC...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp GGGCTCCCAGGGATATGGTTGCCGTCGTACTTGATCCCCATCTGGTaGAGGCCCTTCTCTGTCGGTGCGTATCTCACTGTGATGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GLPGIWLPSYLIPIW*RPFSVGAYLTVMVP
Trigger: TGGAACCATCACAGTGAGATACGCACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CCTTGGGCACATAGGAGACGGCATAGGTGCGGTCTTTGTCATTGTTaGGAACCACTTTGGCCTCCTCCGTGTGTCCCTCGGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: PWAHRRRHRCGLCHC*EPLWPPPCVPRGPQ
Trigger: TTGAGGACCCCGAGGGACACACGGAGGAGGCCAAAGTGGTTCCCAACAATGACAAAGACCGCACCTATGCCGTCTCCTATGTGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp ATAGCCACCCCAGGTGATGGTCACCACATACTTCCCAGGTACCACTaGGTAGTACTCGCACTCGAACACCCCATCTCCAGCCTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: IATPGDGHHILPRYH*VVLALEHPISSLPN
Trigger: GTTCGGGAGGCTGGAGATGGGGTGTTCGAGTGCGAGTACTACCCAGTGGTACCTGGGAAGTATGTGGTGACCATCACCTGGGGTGGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GCTTTCACCTTGTCTGGGAAGCAGTCTGGTGGGGCTGGCTGGATGTaGGCGATGAAAGGCGAGTCCCGGATGTCTTCATCATCGCAGATG +
Preference number: 5 (lower is better)
Translates to: AFTLSGKQSGGAGWM*AMKGESRMSSSSQM
Trigger: CATCTGCGATGATGAAGACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CATGGCTCTTCATTGCCTGAAGGAGCACGGATGCTGGCTGTCAGCTaGCTGAGGTCACCCTCCGTGATCTTCAGTGACACATCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HGSSLPEGARMLAVS*LRSPSVIFSDTSVE
Trigger: CTCCACCGATGTGTCACTGAAGATCACGGAGGGTGACCTCAGCCAGCTGACAGCCAGCATCCGTGCTCCTTCAGGCAATGAAGAGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGATTTTCCAGCTTCATTaGGCGGAAGTTGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLIFQLH*AEVGAR
Trigger: CCGCGCCCCAACTTCCGCCAAATGAAGCTGGAAAAT...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAGACCAGGGGCACAGTaGTCAACCAGGGCACCCAGA +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWRPGAQ*STRAPR
Trigger: TCTGGGTGCCCTGGTTGACAACTGTGCCCCTGGTCT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCCGTTGGGGATCACCTaGATGTCGATGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDPLGIT*MSMGQP
Trigger: TGGCTGCCCCATCGACATCAAGGTGATCCCCAACGG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCGTTGGGGATCACCTaGATGTCGATGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPLGIT*MSMGQP
Trigger: TGGCTGCCCCATCGACATCAAGGTGATCCCCAACGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCGCACAGCCTCGCCCTaGGCTGCCCCAGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSRTASP*AAPAKC
Trigger: GCACTTTGCTGGGGCAGCCAAGGGCGAGGCTGTGCG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCGCACAGCCTCGCCCTaGGCTGCCCCAGCAAAGTGC +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHRTASP*AAPAKC
Trigger: GCACTTTGCTGGGGCAGCCAAGGGCGAGGCTGTGCG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACATCAGCACCTCCGCTTaGACACCAGCGTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDISTSA*TPASDR
Trigger: CCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGAT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCATCAGCACCTCCGCTTaGACACCAGCGTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAISTSA*TPASDR
Trigger: CCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGAT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCCTTGCCTGCTGCCTaGGCGTCCACTGTGATCACA +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPLPAA*ASTVIT
Trigger: TGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGTGATGGTTCCATCCTaGTTGTCAGTGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDVMVPS*LSVMLG
Trigger: CCCCAACATCACTGACAACAAGGATGGAACCATCAC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTGGTTGCCGTCGTACTaGATCCCCATCTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTWLPSY*IPIWCR
Trigger: CCTGCACCAGATGGGGATCAAGTACGACGGCAACCA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCACGTGCTTGCCACTCTaGCGCACGCTCACCACGTGC +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACTCLPL*RTLTTC
Trigger: GCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACGT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCTGTTGGTGACGTGCTaGCCACTCTTGCGCACGCTC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLLVTC*PLLRTL
Trigger: GAGCGTGCGCAAGAGTGGCAAGCACGTCACCAACAG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 90 bp CATAGAACTGCAGAGGGCTCCCAGGGATATGGTTGCCGTCGTACTTaGTCCCCATCTGGTGCAGGCCCTTCTCTGTCGGTGCGTATCTCA +
Preference number: 5 (lower is better)
Translates to: HRTAEGSQGYGCRRT*SPSGAGPSLSVRIS
Trigger: TGAGATACGCACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGGGAGCCCTCTGCAGTTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp TCTCGGATGTTGGCCTTCTTGGGTTTACCCTCGGGATCCAGGATCTaGACGGTAAGAAGCCCCTGCCCAGCATCACGAGCATCAATGGTG +
Preference number: 5 (lower is better)
Translates to: SRMLAFLGLPSGSRI*TVRSPCPASRASMV
Trigger: CACCATTGATGCTCGTGATGCTGGGCAGGGGCTTCTTACCGTGCAGATCCTGGATCCCGAGGGTAAACCCAAGAAGGCCAACATCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp CCCCAGGCCTCCATAACCTGCATTGCGAGTGTCCACAATGAACTCTaGCACTTGGAAGGTTTGTCCCTCGGAAAGGCCTTTGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: PQASITCIASVHNEL*HLEGLSLGKAFAPD
Trigger: GTCTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGTTATGGAGGCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp CCAAATGCTTTCACCTTGTCTGGGAAGCAGTCTGGTGGGGCTGGCTaGATGTGGGCGATGAAAGGCGAGTCCCGGATGTCTTCATCATCG +
Preference number: 5 (lower is better)
Translates to: PNAFTLSGKQSGGAG*MWAMKGESRMSSSS
Trigger: CGATGATGAAGACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp AGGTCCAAATGCTTTCACCTTGTCTGGGAAGCAGTCTGGTGGGGCTaGCTGGATGTGGGCGATGAAAGGCGAGTCCCGGATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: RSKCFHLVWEAVWWG*LDVGDERRVPDVFI
Trigger: GATGAAGACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCATTTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp AGAGGGCTCCCAGGGATATGGTTGCCGTCGTACTTGATCCCCATCTaGTGCAGGCCCTTCTCTGTCGGTGCGTATCTCACTGTGATGGTT +
Preference number: 5 (lower is better)
Translates to: RGLPGIWLPSYLIPI*CRPFSVGAYLTVMV
Trigger: AACCATCACAGTGAGATACGCACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGGGAGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGAGGTCGGTCAGGCGCTaGCCCACACACTTGAGATGC +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGRSVRR*PTHLRC
Trigger: GCATCTCAAGTGTGTGGGCAAGCGCCTGACCGACCT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGTGCTTGGGTGTCTGTTaGCGGGCATCCTCATCATCT +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLCLGVC*RASSSS
Trigger: AGATGATGAGGATGCCCGCAAACAGACACCCAAGCA...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCACAGGGGCACCGGGTTaGAGCTTGGCCTTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACTGAPG*SLALGN
Trigger: GTTTCCCAAGGCCAAGCTCAAACCCGGTGCCCCTGT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCACGGGCTGATACCTaGTTGGCATCCCCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPRADT*LASPRA
Trigger: GGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGTGCAGCGGAACGTGTaGTCACCCTTGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGVQRNV*SPLSSR
Trigger: CCTGGAGGACAAGGGTGACAACACGTTCCGCTGCAC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCTTTGACGGTGACCTaGAGTTCCCCGCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACPLTVT*SSPLPA
Trigger: TGCTGGCAGCGGGGAACTCAAGGTCACCGTCAAAGG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTGGGATGGGTCCACCTaGATGTGGAAGGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDWDGST*MWKGLA
Trigger: TGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACGTCCAGCTTAGCCTaGCCAGCTCCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFTSSLA*PAPLVS
Trigger: GCTGACCAAGGGAGCTGGCAAGGCTAAGCTGGACGT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTCTTGGCACTCGATCTaGGCTTCGCAGGGGCCCTCG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVASWHSI*ASQGPS
Trigger: CGAGGGCCCCTGCGAAGCCAAGATCGAGTGCCAAGA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGCCGTCCGCGTTGTTTaGGATCAGCACCTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAAVRVV*DQHLRF
Trigger: AAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCACTCGGAAGGGGCTCTaGGGCACAGCTACTTCGTCA +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRATRKGL*GTATSS
Trigger: TGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTCCACAGTGAAGCGGTaGGCCTTGTTCACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSTVKR*ALFTKP
Trigger: TGGCTTGGTGAACAAGGCCAACCGCTTCACTGTGGA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTAGGGGCCCGGCCAGCTaGACTGCAGTCCACTGTGAA +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVARGPAS*TAVHCE
Trigger: TTCACAGTGGACTGCAGTCAAGCTGGCCGGGCCCCT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTACTGTAACAAGGCACTaGCTGGCATCCCCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTTVTRH*LASPVG
Trigger: GCCTACAGGGGATGCCAGCAAGTGCCTTGTTACAGT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCTTGCCTGCTGCCTaGGCGTCCACTGTGATCACA +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPLPAA*ASTVIT
Trigger: TGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCATGGTGATGACATATTaGCCCGGCTCGGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVMVMTY*PGSGAV
Trigger: CACAGCTCCCGAGCCGGGCAAATATGTCATCACCAT...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCTCCCAGGGATATGGTaGCCGTCGTACTTGATCCCC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILLPGIW*PSYLIP
Trigger: GGGGATCAAGTACGACGGCAACCATATCCCTGGGAG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACGTGCTTGCCACTCTaGCGCACGCTCACCACGTGC +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVATCLPL*RTLTTC
Trigger: GCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACGT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCCCTGGGATCTTGAGGTaGAGGTCACAGGTGCTACCA +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVPGILR*RSQVLP
Trigger: TGGTAGCACCTGTGACCTCAACCTCAAGATCCCAGG...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTCTGCGGCTTCTGTCTaGCCAGACGGACTTGTCACC +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRASAASV*PDGLVT
Trigger: GGTGACAAGTCCGTCTGGCAAGACAGAAGCCGCAGA...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCTCTGCGGCTTCTGTCTaGCCAGACGGACTTGTCACC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILSAASV*PDGLVT
Trigger: GGTGACAAGTCCGTCTGGCAAGACAGAAGCCGCAGA...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCTCCAGCTCGCACCTaGTGGGCACCACCTTCACCT +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPPART*WAPPSP
Trigger: AGGTGAAGGTGGTGCCCACAAGGTGCGAGCTGGAGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCCCACCATCATCATGTaGGTGCCTGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTPTIIM*VPALLQ
Trigger: CTGCAGCAAAGCAGGCACCAACATGATGATGGTGGG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp CACGAATCGCACACTGTATGCGCTGTCTTCTCCCTCAACGATCTCTaGGGCTTCTGTCTTGCCAGACGGACTTGTCACCTGGGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HESHTVCAVFSLNDL*GFCLARRTCHLGCH
Trigger: ATGACAGCCCAGGTGACAAGTCCGTCTGGCAAGACAGAAGCCGCAGAGATCGTTGAGGGAGAAGACAGCGCATACAGTGTGCGATTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 90 bp GGCATCAATCACACCACGTGCCCCATTAAGCTGCACCGCGAAAGATaGTGGCTGGTTCACTTTAAGCCCTGTCTCCTGGAGGCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: GINHTTCPIKLHRER*WLVHFKPCLLEAGN
Trigger: GTTACCAGCCTCCAGGAGACAGGGCTTAAAGTGAACCAGCCAGCATCTTTCGCGGTGCAGCTTAATGGGGCACGTGGTGTGATTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp TCAGCCTTGACCTTGCTAGCGTCATGGGATGGGTCCACCTTGATGTaGAAGGGACTGGCAGGGATCTCCTGGTTGGCAAACAACACCATG +
Preference number: 5 (lower is better)
Translates to: SALTLLASWDGSTLM*KGLAGISWLANNTM
Trigger: CATGGTGTTGTTTGCCAACCAGGAGATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCATGACGCTAGCAAGGTCAAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp ATCACACCACGTGCCCCATTAAGCTGCACCGCGAAAGATGCTGGCTaGTTCACTTTAAGCCCTGTCTCCTGGAGGCTGGTAACAGTGAGG +
Preference number: 5 (lower is better)
Translates to: ITPRAPLSCTAKDAG*FTLSPVSWRLVTVR
Trigger: CCTCACTGTTACCAGCCTCCAGGAGACAGGGCTTAAAGTGAACCAGCCAGCATCTTTCGCGGTGCAGCTTAATGGGGCACGTGGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCACTTGAGATGCTCGTaGCACCACCGCGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAHLRCS*HHRVNV
Trigger: CACATTCACGCGGTGGTGCAACGAGCATCTCAAGTG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCAAGCAGTCGCTGCTaGGGTGTCTGTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPSSRC*GVCLRA
Trigger: TGCCCGCAAACAGACACCCAAGCAGCGACTGCTTGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTGCCCGGAGCCTCACCCCAGTCTGCCCTTGGGCCACATTTGAGGGACACTGATGAGTGTTCATCCACATaGGGATCCACGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LPGASPQSALGPHLRDTDECSST*GSTISS
Trigger: TGAAGAAATCGTGGATCCCAATGTGGATGAACACTC...ATCAGTGTCCCTCAAATGTGGCCCAAGGGCAGACTGGGGTGAGGCTCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCGTGCGGTCTTTGTCATaGTTGGGAACCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVVRSLS*LGTTLA
Trigger: GGCCAAAGTGGTTCCCAACAATGACAAAGACCGCAC...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCAAGAGCACGGTCACCTaGTGTAACCCAGCAACCTTG +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVKSTVT*CNPATL
Trigger: CAAGGTTGCTGGGTTACACAAGGTGACCGTGCTCTT...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTGTGCAGCGGAACGTGTaGTCACCCTTGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAVQRNV*SPLSSR
Trigger: CCTGGAGGACAAGGGTGACAACACGTTCCGCTGCAC...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATACGAAGTCAGCCGACTaGCCCACCTGGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHTKSAD*PTWPVS
Trigger: GGAGACTGGCCAGGTGGGCAAGTCGGCTGACTTCGT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTCATCACATTCAATCTaGGCTTGTGAGGGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTSSHSI*ACEGPS
Trigger: CGAGGGGCCCTCACAAGCCAAGATTGAATGTGATGA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCAAGGTACCGTCACCGTaGGGGATCACCTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILKVPSP*GITLMS
Trigger: CGACATCAAGGTGATCCCCAACGGTGACGGTACCTT...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAAGGTACCGTCACCGTaGGGGATCACCTTGATGTCG +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWKVPSP*GITLMS
Trigger: CGACATCAAGGTGATCCCCAACGGTGACGGTACCTT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCTGGGATGGGTCCACCTaGATGTGGAAGGGACTGGCA +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFWDGST*MWKGLA
Trigger: TGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCA...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCACTCGGAAGGGGCTCTaGGGCACAGCTACTTCGTCA +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACTRKGL*GTATSS
Trigger: TGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAGGGGCCCGGCCAGCTaGACTGCAGTCCACTGTGAA +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSRGPAS*TAVHCE
Trigger: TTCACAGTGGACTGCAGTCAAGCTGGCCGGGCCCCT...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACATGGTGATGACATATTaGCCCGGCTCGGGAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDMVMTY*PGSGAV
Trigger: CACAGCTCCCGAGCCGGGCAAATATGTCATCACCAT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GGTGTGGCACATCTGTGTGGGTATGAGTTTGGCAGGAAGTGGGGGCCTGGTCTGGTGATGGTTCCATCCTaGTTGTCAGTGATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GVAHLCGYEFGRKWGPGLVMVPS*LSVMLG
Trigger: CCCCAACATCACTGACAACAAGGATGGAACCATCAC...CAGACCAGGCCCCCACTTCCTGCCAAACTCATACCCACACAGATGTGCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGAAGGTGGCAGGCTTGTaGACCATGCCATGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGKVAGL*TMPWLR
Trigger: CCTGAGCCATGGCATGGTCAACAAGCCTGCCACCTT...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCTCCCTGGGATGTGCTaGTCGTCAAAGCGCACGATG +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGLPGMC*SSKRTM
Trigger: CATCGTGCGCTTTGACGACAAGCACATCCCAGGGAG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTGCTCACCGACCTCCTaGGGGGTAAAGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACCSPTS*GVKEIP
Trigger: TGGGATCTCCTTTACCCCCAAGGAGGTCGGTGAGCA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTGCTCACCGACCTCCTaGGGGGTAAAGGAGATCCCA +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGCSPTS*GVKEIP
Trigger: TGGGATCTCCTTTACCCCCAAGGAGGTCGGTGAGCA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCCTGGGATCTTGAGGTaGAGGTCACAGGTGCTACCA +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDPGILR*RSQVLP
Trigger: TGGTAGCACCTGTGACCTCAACCTCAAGATCCCAGG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCAATGCAATCTCTGCCTaGCTGGGACCTTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILNAISA*LGPSTA
Trigger: CGCTGTGGAAGGTCCCAGCAAGGCAGAGATTGCATT...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTGGGATGTGGGCGCCGTaGAACTTGACATCAATTGAG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTGMWAP*NLTSIE
Trigger: CTCAATTGATGTCAAGTTCAACGGCGCCCACATCCC...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTCCTGTGACCTTTGCTTaGAAGGGACTGCCCACAATG +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTPVTFA*KGLPTM
Trigger: CATTGTGGGCAGTCCCTTCAAAGCAAAGGTCACAGG...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTTCATTTGGCGGAAGTaGGGGCGCGGGTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAFIWRK*GRGWNL
Trigger: CAAGTTCCACCCGCGCCCCAACTTCCGCCAAATGAA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCATCCACAATAGCCTaGCTGTCGATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPSTIA*LSMDTS
Trigger: GCTCGTGTCCATCGACAGCAAGGCTATTGTGGATGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCCAAGCAGTCGCTGCTaGGGTGTCTGTTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSPSSRC*GVCLRA
Trigger: TGCCCGCAAACAGACACCCAAGCAGCGACTGCTTGG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAGACCAGGGGCACAGTaGTCAACCAGGGCACCCAGA +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSRPGAQ*STRAPR
Trigger: TCTGGGTGCCCTGGTTGACAACTGTGCCCCTGGTCT...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCACAGGGGCACCGGGTTaGAGCTTGGCCTTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSTGAPG*SLALGN
Trigger: GTTTCCCAAGGCCAAGCTCAAACCCGGTGCCCCTGT...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCGGTCTTTGTCATTGTaGGGAACCACTTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWRSLSL*GTTLAS
Trigger: GGAGGCCAAAGTGGTTCCCAACAATGACAAAGACCG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCCGGTCTTTGTCATTGTaGGGAACCACTTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRARSLSL*GTTLAS
Trigger: GGAGGCCAAAGTGGTTCCCAACAATGACAAAGACCG...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGTGCGGTCTTTGTCATaGTTGGGAACCACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAVRSLS*LGTTLA
Trigger: GGCCAAAGTGGTTCCCAACAATGACAAAGACCGCAC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCAAGAGCACGGTCACCTaGTGTAACCCAGCAACCTTG +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAKSTVT*CNPATL
Trigger: CAAGGTTGCTGGGTTACACAAGGTGACCGTGCTCTT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAATACTCACATCACCTaGCCCGGCTTCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDNTHIT*PGFTAV
Trigger: GACTGCAGTGAAGCCGGGCAAGGTGATGTGAGTATT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGAATACTCACATCACCTaGCCCGGCTTCACTGCAGTC +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWNTHIT*PGFTAV
Trigger: GACTGCAGTGAAGCCGGGCAAGGTGATGTGAGTATT...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCGCAGGGATCTCCTGGTaGGCAAACAACACCATGATC +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAAGISW*ANNTMI
Trigger: GATCATGGTGTTGTTTGCCAACCAGGAGATCCCTGC...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATACCACAAAGGGACTTTaGGGGACAGGGTCCCCACCG +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHTTKGL*GTGSPP
Trigger: CGGTGGGGACCCTGTCCCCAAAAGTCCCTTTGTGGT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACAGAGTCTCAGCAAACAGGATATaGATGGTGTACTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FSKPFTLGLWLPDGPDRVSANRI*MVYSPG
Trigger: GCCAGGCGAGTACACCATCAATATCCTGTTTGCTGA...GACTCTGTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCGCCGTCCGCGTTGTTTaGGATCAGCACCTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: KIVREISSLGGLARAEHIAVRVV*DQHLRF
Trigger: AAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGC...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCAGGCCCAGAGACCTaGATGCCACTGGTATCAACT +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPGPET*MPLVST
Trigger: AGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCAGGCCCAGAGACCTaGATGCCACTGGTATCAACT +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGPGPET*MPLVST
Trigger: AGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCGTGAAGCGGTTGGCCTaGTTCACCAAGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: KIVREISSLGGLARAEHIVKRLA*FTKPPS
Trigger: GGAAGGTGGCTTGGTGAACAAGGCCAACCGCTTCAC...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTGGGTACCATCGCCATaGTCACGCACCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSWVPSP*SRTSTG
Trigger: GCCTGTGGAGGTGCGTGACAATGGCGATGGTACCCA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTGGGTACCATCGCCATaGTCACGCACCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSWVPSP*SRTSTG
Trigger: GCCTGTGGAGGTGCGTGACAATGGCGATGGTACCCA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCGGATGTTGGCCTTCTaGGGTTTACCCTCGGGATCC +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVARMLAF*GLPSGS
Trigger: GGATCCCGAGGGTAAACCCAAGAAGGCCAACATCCG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACATGGTTCCATCCTTGTaGTCAGTGATGTTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDMVPSL*SVMLGR
Trigger: GCGCCCCAACATCACTGACAACAAGGATGGAACCAT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCTTCCCCAGCATCCTaGGTGACAATTGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPSPAS*VTIVKV
Trigger: CACCTTCACAATTGTCACCAAGGATGCTGGGGAAGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCAGGCATGGCTCTTCATaGCCTGAAGGAGCACGGATG +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACRHGSS*PEGARM
Trigger: CATCCGTGCTCCTTCAGGCAATGAAGAGCCATGCCT...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATATCCCAATGTGCCTGTaGGGCAGGCGCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHIPMCL*GRRFSR
Trigger: CCTGCTGAAGCGCCTGCCCAACAGGCACATTGGGAT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTATCCCAATGTGCCTGTaGGGCAGGCGCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSIPMCL*GRRFSR
Trigger: CCTGCTGAAGCGCCTGCCCAACAGGCACATTGGGAT...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCTGTTGGTGACGTGCTaGCCACTCTTGCGCACGCTC +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHLLVTC*PLLRTL
Trigger: GAGCGTGCGCAAGAGTGGCAAGCACGTCACCAACAG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACATCTTAAAGGGGCTGTaGGTGACGTGCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDILKGL*VTCLPL
Trigger: GAGTGGCAAGCACGTCACCAACAGCCCCTTTAAGAT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCCCCTCGGAAAGGCCTTaGCCCCAGACTCGAACTTTG +
Preference number: 5 (lower is better)
Translates to: KIVREISSLGGLARAEHIPSERP*PQTRTL
Trigger: CAAAGTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGG...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACTGCCACTTGGAAGGTTaGTCCCTCGGAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDCHLEG*SLGKAF
Trigger: AAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCA...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTAATGAACTCTGCCACTaGGAAGGTTTGTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTNELCH*EGLSLG
Trigger: TCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATT...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCAGTTAATGTCCACCTaGCTAGGGCCTTCGATGCTC +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDQLMST*LGPSML
Trigger: GAGCATCGAAGGCCCTAGCAAGGTGGACATTAACTG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCTGTGACCTTTGCTTaGAAGGGACTGCCCACAATG +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPVTFA*KGLPTM
Trigger: CATTGTGGGCAGTCCCTTCAAAGCAAAGGTCACAGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 90 bp GTATCTGTCTTAGCACCGGAGGGGTTGAGGACACGAGCTGTCACATaGTTGCCGCCTGTAGCTGTTAGAGATCTCGCATCCACAGTAAAC +
Preference number: 5 (lower is better)
Translates to: VSVLAPEGLRTRAVT*LPPVAVRDLASTVN
Trigger: GTTTACTGTGGATGCGAGATCTCTAACAGCTACAGGCGGCAACCATGTGACAGCTCGTGTCCTCAACCCCTCCGGTGCTAAGACAGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCACTTGAGATGCTCGTaGCACCACCGCGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAHLRCS*HHRVNV
Trigger: CACATTCACGCGGTGGTGCAACGAGCATCTCAAGTG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGTGCTTGGGTGTCTGTTaGCGGGCATCCTCATCATCT +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGCLGVC*RASSSS
Trigger: AGATGATGAGGATGCCCGCAAACAGACACCCAAGCA...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCCCCTTGGTGAACACCTaGAAGTCAGCCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFPLVNT*KSATSF
Trigger: GAAAGAGGTGGCTGACTTCAAGGTGTTCACCAAGGG...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGGCAGGGATCTCCTGGTaGGCAAACAACACCATGATC +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGAGISW*ANNTMI
Trigger: GATCATGGTGTTGTTTGCCAACCAGGAGATCCCTGC...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCAAGATCCGTCACCATaGTCTTGGCACTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDQDPSP*SWHSIL
Trigger: CAAGATCGAGTGCCAAGACAATGGTGACGGATCTTG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCATCAGCCCCACTTGGGATGGAAGCACTTaGATCTTGAAAGGGCTTCGT +
Preference number: 5 (lower is better)
Translates to: LSHTDPPTQCLPTGISPTWDGST*ILKGLR
Trigger: ACGAAGCCCTTTCAAGATCAAAGTGCTTCCATCCCA...AGTGGGGCTGATGCCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTCGGATGTTGGCCTTCTaGGGTTTACCCTCGGGATCC +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSRMLAF*GLPSGS
Trigger: GGATCCCGAGGGTAAACCCAAGAAGGCCAACATCCG...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCTATGTGCCATCCCCATaGTCTCGGATGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACYVPSP*SRMLAF
Trigger: GAAGGCCAACATCCGAGACAATGGGGATGGCACATA...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACTGTAACAAGGCACTaGCTGGCATCCCCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVATVTRH*LASPVG
Trigger: GCCTACAGGGGATGCCAGCAAGTGCCTTGTTACAGT...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCAAGGGGATGACCAAGTaGAAAGGCCTCAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: LLFLFQALHSRAVATRRAKGMTK*KGLSMD
Trigger: ATCCATGCTGAGGCCTTTCAACTTGGTCATCCCCTT...GGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTGGTTGCCGTCGTACTaGATCCCCATCTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSWLPSY*IPIWCR
Trigger: CCTGCACCAGATGGGGATCAAGTACGACGGCAACCA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCTCCCTGGGATGTGCTaGTCGTCAAAGCGCACGATG +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHLPGMC*SSKRTM
Trigger: CATCGTGCGCTTTGACGACAAGCACATCCCAGGGAG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp CATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCAGTTAATGTCCACCTaGCTAGGGCCTTCGATGCTC +
Preference number: 5 (lower is better)
Translates to: HCSFFSKPFTLGLWLPDGQLMST*LGPSML
Trigger: GAGCATCGAAGGCCCTAGCAAGGTGGACATTAACTG...CCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTTCTTGCCAGACGGACTaGTCACCTGGGCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVASCQTD*SPGLSC
Trigger: ACATGACAGCCCAGGTGACAAGTCCGTCTGGCAAGA...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTGTTGGCCGCGGTACTaGACAGTGACTGTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSCWPRY*TVTVWG
Trigger: TCCCCACACAGTCACTGTCAAGTACCGCGGCCAACA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTGTTGGCCGCGGTACTaGACAGTGACTGTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSCWPRY*TVTVWG
Trigger: TCCCCACACAGTCACTGTCAAGTACCGCGGCCAACA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCCACCATCATCATGTaGGTGCCTGCTTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPTIIM*VPALLQ
Trigger: CTGCAGCAAAGCAGGCACCAACATGATGATGGTGGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATCCATCCACAATAGCCTaGCTGTCGATGGACACGAGC +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHPSTIA*LSMDTS
Trigger: GCTCGTGTCCATCGACAGCAAGGCTATTGTGGATGG...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACCAGGAGCCGTCACCTTaGTCATCACATTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDQEPSP*SSHSIL
Trigger: CAAGATTGAATGTGATGACAAAGGTGACGGCTCCTG...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTCCACAGTGAAGCGGTaGGCCTTGTTCACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHSTVKR*ALFTKP
Trigger: TGGCTTGGTGAACAAGGCCAACCGCTTCACTGTGGA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCCATTGTCTCGGATGTaGGCCTTCTTGGGTTTACCC +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVAPLSRM*AFLGLP
Trigger: GGGTAAACCCAAGAAGGCCAACATCCGAGACAATGG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCAATGAACTCTGCCACTaGGAAGGTTTGTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: AACSGSAVFHCSFFSKPFNELCH*EGLSLG
Trigger: TCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATT...GAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTCTTGCCAGACGGACTaGTCACCTGGGCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHSCQTD*SPGLSC
Trigger: ACATGACAGCCCAGGTGACAAGTCCGTCTGGCAAGA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAATGCAATCTCTGCCTaGCTGGGACCTTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSNAISA*LGPSTA
Trigger: CGCTGTGGAAGGTCCCAGCAAGGCAGAGATTGCATT...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCCACTGGCCACAAGAACCATCTTaGCGGTCCTCAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: VRVTSLSHRSSNSVLAHWPQEPS*RSSNAI
Trigger: GATTGCATTTGAGGACCGCAAAGATGGTTCTTGTGG...CCAGTGGGCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GAGTCCTTAGGCACGGCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCCACAAGAACCATCTTaGCGGTCCTCAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: ESLGTAVCEGDFSLTQILPQEPS*RSSNAI
Trigger: GATTGCATTTGAGGACCGCAAAGATGGTTCTTGTGG...GAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGCCGTGCCTAAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTCATCACATTCAATCTaGGCTTGTGAGGGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSSSHSI*ACEGPS
Trigger: CGAGGGGCCCTCACAAGCCAAGATTGAATGTGATGA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCCAGGAGCCGTCACCTTaGTCATCACATTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACQEPSP*SSHSIL
Trigger: CAAGATTGAATGTGATGACAAAGGTGACGGCTCCTG...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTATGTGCCATCCCCATaGTCTCGGATGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHYVPSP*SRMLAF
Trigger: GAAGGCCAACATCCGAGACAATGGGGATGGCACATA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTATGGTTCCATCCTTGTaGTCAGTGATGTTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSMVPSL*SVMLGR
Trigger: GCGCCCCAACATCACTGACAACAAGGATGGAACCAT...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTTGCCACTTGGAAGGTTaGTCCCTCGGAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSCHLEG*SLGKAF
Trigger: AAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCA...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCAAGATCCGTCACCATaGTCTTGGCACTCGATCTTG +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSQDPSP*SWHSIL
Trigger: CAAGATCGAGTGCCAAGACAATGGTGACGGATCTTG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCTCAGCAAACAGGATATaGATGGTGTACTCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSSANRI*MVYSPG
Trigger: GCCAGGCGAGTACACCATCAATATCCTGTTTGCTGA...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATAAGGGGATGACCAAGTaGAAAGGCCTCAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHKGMTK*KGLSMD
Trigger: ATCCATGCTGAGGCCTTTCAACTTGGTCATCCCCTT...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACGTATCGTTGTCATTCTaGATGATGTCAAAGTCGATG +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDVSLSF*MMSKSM
Trigger: CATCGACTTTGACATCATCAAGAATGACAACGATAC...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTACCAGACGGGCCTGACACTGTGAAGGTATCGTaGTCATTCTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: SFFSKPFTLGLWLPDGPDTVKVS*SFLMMS
Trigger: TGACATCATCAAGAATGACAACGATACCTTCACAGT...GTCAGGCCCGTCTGGTAGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAGGCAGGTGTTTTAGTGTCTGATTCTGTGAGTGTGCAGAGGGGTGTGGCACATTGGGATGGAAGCACTTaGATCTTGAAAGGGCTTCGT +
Preference number: 5 (lower is better)
Translates to: KAGVLVSDSVSVQRGVAHWDGST*ILKGLR
Trigger: ACGAAGCCCTTTCAAGATCAAAGTGCTTCCATCCCA...ATGTGCCACACCCCTCTGCACACTCACAGAATCAGACACTAAAACACCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTGAGTGTTCATCCACATaGGGATCCACGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLWVCRLPLLFLFQALHSECSST*GSTISS
Trigger: TGAAGAAATCGTGGATCCCAATGTGGATGAACACTC...AGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp GCGGTTTGTGAGGGTGACTTCTCTCTCACACAGATCCTCCAACTCAGTGCTTGCGTATCGTTGTCATTCTaGATGATGTCAAAGTCGATG +
Preference number: 5 (lower is better)
Translates to: AVCEGDFSLTQILQLSACVSLSF*MMSKSM
Trigger: CATCGACTTTGACATCATCAAGAATGACAACGATAC...GCAAGCACTGAGTTGGAGGATCTGTGTGAGAGAGAAGTCACCCTCACAAACCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp TGCCGTCTTCCATTGCTCTTTCTTTTCCAAGCCCTTCACTCTAGGGCTGTGGCTCTTCCAGGTACGTGCTaGTCAGCAAACTTAATATTG +
Preference number: 5 (lower is better)
Translates to: CRLPLLFLFQALHSRAVALPGTC*SANLIL
Trigger: CAATATTAAGTTTGCTGACAAGCACGTACCTGGAAG...AGCCACAGCCCTAGAGTGAAGGGCTTGGAAAAGAAAGAGCAATGGAAGACGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp AAAATAGTAAGAGAAATCAGTTCCCTGGGAGGCCTGGCGAGGGCAGAGCACATCACTGTGAAGGTATCGTaGTCATTCTTGATGATGTCA +
Preference number: 5 (lower is better)
Translates to: KIVREISSLGGLARAEHITVKVS*SFLMMS
Trigger: TGACATCATCAAGAATGACAACGATACCTTCACAGT...GATGTGCTCTGCCCTCGCCAGGCCTCCCAGGGAACTGATTTCTCTTACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS-3UTR CAA 90 bp ACATCACATGCTGCTTGCTCTGGGTCTGCCGTCTTCCATTGCTCTTTCTTTTCCCTTCCAGGTACGTGCTaGTCAGCAAACTTAATATTG +
Preference number: 5 (lower is better)
Translates to: TSHAACSGSAVFHCSFFSLPGTC*SANLIL
Trigger: CAATATTAAGTTTGCTGACAAGCACGTACCTGGAAG...GGAAAAGAAAGAGCAATGGAAGACGGCAGACCCAGAGCAAGCAGCATGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CCACGGGCTCCTCTGTGGCCCAGTGCGTGGGGCAGGTaGCAGGCCGAAGAGGGGCATAGGGCTGGCGCATCT +
Preference number: 6 (lower is better)
Translates to: PRAPLWPSAWGR*QAEEGHRAGAS
Trigger: AGATGCGCCAGCCCTATGCCCCTCTTCGGCCTGGCACCTGCCCCACGCACTGGGCCACAGAGGAGCCCGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065090.8
CDS CCA 72 bp GCGGTTGGCCTTGTTCACCAAGCCACCTTCCAGACCTaGCCCGAAGGCCCGGACTCGGGTGGGGTCACAGCC +
Preference number: 6 (lower is better)
Translates to: AVGLVHQATFQT*PEGPDSGGVTA
Trigger: GGCTGTGACCCCACCCGAGTCCGGGCCTTCGGGCCAGGTCTGGAAGGTGGCTTGGTGAACAAGGCCAACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp TGTCCTGAGAGCTGGCCTCACCTTCCTGCTGCCGGGTaGTGCTGCCGAAGGAGCCCAGGCGTTCCCGGCCTA +
Preference number: 6 (lower is better)
Translates to: CPESWPHLPAAG*CCRRSPGVPGL
Trigger: TAGGCCGGGAACGCCTGGGCTCCTTCGGCAGCATCACCCGGCAGCAGGAAGGTGAGGCCAGCTCTCAGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp TCTCCAGCCTTGCCACGCTCCAGGCCTGGCCCACTGGCCCTCACCTaGCTTGGGTCGAACACAGGCTGGATGGTGGCCTTGAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: SPALPRSRPGPLALT*LGSNTGWMVALKGE
Trigger: CTCGCCCTTCAAGGCCACCATCCAGCCTGTGTTCGACCCAAGCAAGGTGAGGGCCAGTGGGCCAGGCCTGGAGCGTGGCAAGGCTGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GCACGGTGTGTGGCCCCTCCATCACGGGCCTGTACGTaGAGCGGAACGTGTTGTCACCCTTGTCCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: ARCVAPPSRACT*SGTCCHPCPPG
Trigger: CCCTGGAGGACAAGGGTGACAACACGTTCCGCTGCACGTACAGGCCCGTGATGGAGGGGCCACACACCGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GGACTCCGGGTGATGGGTGCACCAGCAAAGGCCACATaGACGGTGTGTGGCCCCTCCATCACGGGCCTGTAC +
Preference number: 6 (lower is better)
Translates to: GLRVMGAPAKAT*TVCGPSITGLY
Trigger: GTACAGGCCCGTGATGGAGGGGCCACACACCGTGCATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp AAGTCAGCCACCTCTTTCACACGCACACCTTTGGGCTaGAGGCCCCGCCCAGAGGCTCTGCAGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: KSATSFTRTPLG*RPRPEALQALG
Trigger: CCCCAACGCCTGCAGAGCCTCTGGGCGGGGCCTGCAGCCCAAAGGTGTGCGTGTGAAAGAGGTGGCTGACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CCTCGCTCCAGCCCTGTGCCTCCAGCTCGCACCTTGTaGGCACCACCTTCACCTAGCGGACCCACAGTGAAC +
Preference number: 6 (lower is better)
Translates to: PRSSPVPPARTL*APPSPSGPTVN
Trigger: GTTCACTGTGGGTCCGCTAGGTGAAGGTGGTGCCCACAAGGTGCGAGCTGGAGGCACAGGGCTGGAGCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TTGCCACGCTCCAGGCCTGGCCCACTGGCCCTCACCTaGCTTGGGTCGAACACAGGCTGGATGGTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LPRSRPGPLALT*LGSNTGWMVAL
Trigger: CAAGGCCACCATCCAGCCTGTGTTCGACCCAAGCAAGGTGAGGGCCAGTGGGCCAGGCCTGGAGCGTGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp CCCTCCATCACGGGCCTGTACGTGCAGCGGAACGTGTTGTCACCCTaGTCCTCCAGGGCCACCTCGACTGTATCCCGACGTCCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: PSITGLYVQRNVLSP*SSRATSTVSRRPCG
Trigger: CCCACAGGGACGTCGGGATACAGTCGAGGTGGCCCTGGAGGACAAGGGTGACAACACGTTCCGCTGCACGTACAGGCCCGTGATGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp GGGTCTCCGCCGACCTGGGTGGACTCCTCCACTCGGACTTCACGCTaGGTCTCCCCACCCCGAGTCTTGCTGATCTCTGTCCGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: GSPPTWVDSSTRTSR*VSPPRVLLISVRSV
Trigger: CACAGAGCGGACAGAGATCAGCAAGACTCGGGGTGGGGAGACCAAGCGTGAAGTCCGAGTGGAGGAGTCCACCCAGGTCGGCGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp CGGGAGGGTGAGGTCATCCGCACATCGAGTTGTCCCTaGCCACCAGCCCCTCTGGTGTTCACCGAGAACGCC +
Preference number: 6 (lower is better)
Translates to: REGEVIRTSSCP*PPAPLVFTENA
Trigger: GGCGTTCTCGGTGAACACCAGAGGGGCTGGTGGTCAGGGACAACTCGATGTGCGGATGACCTCACCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp TCCGCTCTGTGCGGGTGTACGTATGACTGCTCCGCGTaGAGGTGCGAGTCAGGCGCTCCTGGGCAGACACCA +
Preference number: 6 (lower is better)
Translates to: SALCGCTYDCSA*RCESGAPGQTP
Trigger: TGGTGTCTGCCCAGGAGCGCCTGACTCGCACCTTCACGCGGAGCAGTCATACGTACACCCGCACAGAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp ATGGCTTCCACCACGAAGTCAGCCGACTTGCCCACCTaGCCAGTCTCCAACCCAGGACCCCATGCCCGCACT +
Preference number: 6 (lower is better)
Translates to: MASTTKSADLPT*PVSNPGPHART
Trigger: AGTGCGGGCATGGGGTCCTGGGTTGGAGACTGGCCAGGTGGGCAAGTCGGCTGACTTCGTGGTGGAAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CAGGCTTCCCAATCAGGGCAGAGACCAGGGGCACAGTaGTCAACCAGGGCACCCAGAGCCTTGCCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: QASQSGQRPGAQ*STRAPRALPSC
Trigger: GCAGGACGGCAAGGCTCTGGGTGCCCTGGTTGACAACTGTGCCCCTGGTCTCTGCCCTGATTGGGAAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp ATGGAGAATGGTGCCGGGGTGCCTACAAGCCCGCCCTaGAGACCAGGGCCATACGCGCAGACCTTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: MENGAGVPTSPP*RPGPYAQTLEG
Trigger: CCCCTCTAAGGTCTGCGCGTATGGCCCTGGTCTCAAGGGCGGGCTTGTAGGCACCCCGGCACCATTCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp GTGTGTGGCCCCTCCATCACGGGCCTGTACGTGCAGCGGAACGTGTaGTCACCCTTGTCCTCCAGGGCCACCTCGACTGTATCCCGACGT +
Preference number: 6 (lower is better)
Translates to: VCGPSITGLYVQRNV*SPLSSRATSTVSRR
Trigger: ACGTCGGGATACAGTCGAGGTGGCCCTGGAGGACAAGGGTGACAACACGTTCCGCTGCACGTACAGGCCCGTGATGGAGGGGCCACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp ACCTCCCGCAGGACACCATGTGGCTCCACACCAGGCCCAGAGACCTaGATGCCACTGGTATCAACTGCAGGCTGCACGTGGACACGGGTG +
Preference number: 6 (lower is better)
Translates to: TSRRTPCGSTPGPET*MPLVSTAGCTWTRV
Trigger: CACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGGTGTGGAGCCACATGGTGTCCTGCGGGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CCACATCGAGCTCTGCCCCATCGGGTGTGGATACTGTaGAGGTCACCTTCCCCTTGCCTGCTGCCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: PHRALPHRVWIL*RSPSPCLLPWR
Trigger: ACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACACCCGATGGGGCAGAGCTCGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CTCCAGGGCCACCTCGACTGTATCCCGACGTCCCTGTaGGTCCACGATCACCACAGCAACATCACCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LQGHLDCIPTSL*VHDHHSNITSA
Trigger: GGCACTGGTGATGTTGCTGTGGTGATCGTGGACCCACAGGGACGTCGGGATACAGTCGAGGTGGCCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CGAAAACAGCAGGGAAAGGGTCTCCGCCGACCTGGGTaGACTCCTCCACTCGGACTTCACGCTTGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: RKQQGKGLRRPG*TPPLGLHAWSP
Trigger: GGGAGACCAAGCGTGAAGTCCGAGTGGAGGAGTCCACCCAGGTCGGCGGAGACCCTTTCCCTGCTGTTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TCGCCGAAAACAGCAGGGAAAGGGTCTCCGCCGACCTaGGTGGACTCCTCCACTCGGACTTCACGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SPKTAGKGSPPT*VDSSTRTSRLV
Trigger: GACCAAGCGTGAAGTCCGAGTGGAGGAGTCCACCCAGGTCGGCGGAGACCCTTTCCCTGCTGTTTTCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CCCACAGGTTCCAGACCAGGGCCACGGGCTGATACCTaGTTGGCATCCCCGAGAGCCATGCCCACATTCACC +
Preference number: 6 (lower is better)
Translates to: PTGSRPGPRADT*LASPRAMPTFT
Trigger: GGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp ACGGGCCTGTACGTGCAGCGGAACGTGTTGTCACCCTaGTCCTCCAGGGCCACCTCGACTGTATCCCGACGT +
Preference number: 6 (lower is better)
Translates to: TGLYVQRNVLSP*SSRATSTVSRR
Trigger: ACGTCGGGATACAGTCGAGGTGGCCCTGGAGGACAAGGGTGACAACACGTTCCGCTGCACGTACAGGCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CCCTCCATCACGGGCCTGTACGTGCAGCGGAACGTGTaGTCACCCTTGTCCTCCAGGGCCACCTCGACTGTA +
Preference number: 6 (lower is better)
Translates to: PSITGLYVQRNV*SPLSSRATSTV
Trigger: TACAGTCGAGGTGGCCCTGGAGGACAAGGGTGACAACACGTTCCGCTGCACGTACAGGCCCGTGATGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CCGACCTGGGTGGACTCCTCCACTCGGACTTCACGCTaGGTCTCCCCACCCCGAGTCTTGCTGATCTCTGTC +
Preference number: 6 (lower is better)
Translates to: PTWVDSSTRTSR*VSPPRVLLISV
Trigger: GACAGAGATCAGCAAGACTCGGGGTGGGGAGACCAAGCGTGAAGTCCGAGTGGAGGAGTCCACCCAGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp AGCTCTGCCCCATCGGGTGTGGATACTGTGCAGGTCACCTTCCCCTaGCCTGCTGCCTTGGCGTCCACTGTGATCACAGTCTCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: SSAPSGVDTVQVTFP*PAALASTVITVSSP
Trigger: CGGAGAGGAGACTGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACACCCGATGGGGCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp GCAGAGGGCTCCCAGGGATATGGTTGCCGTCGTACTTaGTCCCCATCTGGTGCAGGCCCTTCTCTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: AEGSQGYGCRRT*SPSGAGPSLSV
Trigger: CACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGGGAGCCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp TTGCTGATCTCTGTCCGCTCTGTGCGGGTGTACGTATaGCTGCTCCGCGTGAAGGTGCGAGTCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: LLISVRSVRVYV*LLRVKVRVRRS
Trigger: GGAGCGCCTGACTCGCACCTTCACGCGGAGCAGTCATACGTACACCCGCACAGAGCGGACAGAGATCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp ACCAGGCCCAGAGACCTTGATGCCACTGGTATCAACTaGAGGCTGCACGTGGACACGGGTGGGGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: TRPRDLDATGIN*RLHVDTGGELG
Trigger: CCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGGGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp TGTTGGGCAGGCGCTTCAGCAGGCATGGCTCTTCATTaGCTGAAGGAGCACGGATGCTGGCTGTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: CWAGASAGMALH*LKEHGCWLSAG
Trigger: GCCAGCTGACAGCCAGCATCCGTGCTCCTTCAGGCAATGAAGAGCCATGCCTGCTGAAGCGCCTGCCCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GTGACGTGCTTGCCACTCTTGCGCACGCTCACCACGTaGTCACCGACCTCCTTGGGGGTAAAGGAGATCCCA +
Preference number: 6 (lower is better)
Translates to: VTCLPLLRTLTT*SPTSLGVKEIP
Trigger: TGGGATCTCCTTTACCCCCAAGGAGGTCGGTGAGCACGTGGTGAGCGTGCGCAAGAGTGGCAAGCACGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp GCTCTGCAGGCGTTGGGGTTACAGGCTTCTGCCACATaGACAGGGAAAGGACTCCGGGTGATGGGTGCACCA +
Preference number: 6 (lower is better)
Translates to: ALQALGLQASAT*TGKGLRVMGAP
Trigger: TGGTGCACCCATCACCCGGAGTCCTTTCCCTGTCCATGTGGCAGAAGCCTGTAACCCCAACGCCTGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TCCGCACATCGAGTTGTCCCTGACCACCAGCCCCTCTaGTGTTCACCGAGAACGCCTGTTCCTGTCCCACAG +
Preference number: 6 (lower is better)
Translates to: SAHRVVPDHQPL*CSPRTPVPVPQ
Trigger: CTGTGGGACAGGAACAGGCGTTCTCGGTGAACACCAGAGGGGCTGGTGGTCAGGGACAACTCGATGTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp ACCTTGATGCCACTGGTATCAACTGCAGGCTGCACGTaGACACGGGTGGGGAACTTGGGTATGGGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: TLMPLVSTAGCT*TRVGNLGMGWP
Trigger: CGGCCACCCCATACCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GGCTCCTCTGTGCCCTTTGGACCTTTGACGGTGACCTaGAGTTCCCCGCTGCCAGCACCCTTGGTGAACACC +
Preference number: 6 (lower is better)
Translates to: GSSVPFGPLTVT*SSPLPAPLVNT
Trigger: GGTGTTCACCAAGGGTGCTGGCAGCGGGGAACTCAAGGTCACCGTCAAAGGTCCAAAGGGCACAGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GAGCAGCGGAAGGTACCGTCACCGTTGGGGATCACCTaGATGTCGATGGGGCAGCCATCTGCATCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: EQRKVPSPLGIT*MSMGQPSASWA
Trigger: TGCCCAGGATGCAGATGGCTGCCCCATCGACATCAAGGTGATCCCCAACGGTGACGGTACCTTCCGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CCAGCACCCCTGGTTTCCACAGTGAAGCGGTTGGCCTaGTTCACCAAGCCACCTTCCAGACCTGGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: PAPLVSTVKRLA*FTKPPSRPGPK
Trigger: CTTCGGGCCAGGTCTGGAAGGTGGCTTGGTGAACAAGGCCAACCGCTTCACTGTGGAAACCAGGGGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CTGTTGGGCAGGCGCTTCAGCAGGCATGGCTCTTCATaGCCTGAAGGAGCACGGATGCTGGCTGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LLGRRFSRHGSS*PEGARMLAVSW
Trigger: CCAGCTGACAGCCAGCATCCGTGCTCCTTCAGGCAATGAAGAGCCATGCCTGCTGAAGCGCCTGCCCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp CTCTTGCGCACGCTCACCACGTGCTCACCGACCTCCTaGGGGGTAAAGGAGATCCCAATGTGCCTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: LLRTLTTCSPTS*GVKEIPMCLLG
Trigger: GCCCAACAGGCACATTGGGATCTCCTTTACCCCCAAGGAGGTCGGTGAGCACGTGGTGAGCGTGCGCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp GCCACGTTACCCACAGGTTCCAGACCAGGGCCACGGGCTGATACCTaGTTGGCATCCCCGAGAGCCATGCCCACATTCACCTCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: ATLPTGSRPGPRADT*LASPRAMPTFTSKG
Trigger: TCCCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGTGGGTAACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp CCAATGTGCCTGTTGGGCAGGCGCTTCAGCAGGCATGGCTCTTCATaGCCTGAAGGAGCACGGATGCTGGCTGTCAGCTGGCTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: PMCLLGRRFSRHGSS*PEGARMLAVSWLRS
Trigger: TGACCTCAGCCAGCTGACAGCCAGCATCCGTGCTCCTTCAGGCAATGAAGAGCCATGCCTGCTGAAGCGCCTGCCCAACAGGCACATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp AGGCTTCTGCCACATGGACAGGGAAAGGACTCCGGGTaGTGGGTGCACCAGCAAAGGCCACATGCACGGTGT +
Preference number: 6 (lower is better)
Translates to: RLLPHGQGKDSG*WVHQQRPHARC
Trigger: ACACCGTGCATGTGGCCTTTGCTGGTGCACCCATCACCCGGAGTCCTTTCCCTGTCCATGTGGCAGAAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp GGAAGCAGTCTGGTGGGGCTGGCTGGATGTGGGCGATaGAAGGCGAGTCCCGGATGTCTTCATCATCGCAGA +
Preference number: 6 (lower is better)
Translates to: GSSLVGLAGCGR*KASPGCLHHRR
Trigger: TCTGCGATGATGAAGACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp AGCAGCGGAAGGTACCGTCACCGTTGGGGATCACCTTaGTGTCGATGGGGCAGCCATCTGCATCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: SSGRYRHRWGSP*CRWGSHLHPGH
Trigger: ATGCCCAGGATGCAGATGGCTGCCCCATCGACATCAAGGTGATCCCCAACGGTGACGGTACCTTCCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp CAATGGTGGCAATGGAGGGTGCCTGTCTGCGCCGAGTaGTGCTTTCCTTCATGCGTCCCTCGCCAGTCACCT +
Preference number: 6 (lower is better)
Translates to: QWWQWRVPVCAE*CFPSCVPRQSP
Trigger: AGGTGACTGGCGAGGGACGCATGAAGGAAAGCATCACTCGGCGCAGACAGGCACCCTCCATTGCCACCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp GGACTTCACGCTTGGTCTCCCCACCCCGAGTCTTGCTaGTCTCTGTCCGCTCTGTGCGGGTGTACGTATGAC +
Preference number: 6 (lower is better)
Translates to: GLHAWSPHPESC*SLSALCGCTYD
Trigger: GTCATACGTACACCCGCACAGAGCGGACAGAGATCAGCAAGACTCGGGGTGGGGAGACCAAGCGTGAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GGCGAGTCCCGGATGTCTTCATCATCGCAGATGACATaGACAGCATACTCCCCAGGCTCCGTGGGCCAGTAC +
Preference number: 6 (lower is better)
Translates to: GESRMSSSSQMT*TAYSPGSVGQY
Trigger: GTACTGGCCCACGGAGCCTGGGGAGTATGCTGTGCATGTCATCTGCGATGATGAAGACATCCGGGACTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CCAGAGACCTTGATGCCACTGGTATCAACTGCAGGCTaGACGTGGACACGGGTGGGGAACTTGGGTATGGGG +
Preference number: 6 (lower is better)
Translates to: PETLMPLVSTAG*TWTRVGNLGMG
Trigger: CCCCATACCCAAGTTCCCCACCCGTGTCCACGTGCAGCCTGCAGTTGATACCAGTGGCATCAAGGTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GGGACCCATCTCCTGGGGCACGAATCGCACACTGTATaGGCTGTCTTCTCCCTCAACGATCTCTGCGGCTTC +
Preference number: 6 (lower is better)
Translates to: GTHLLGHESHTV*AVFSLNDLCGF
Trigger: GAAGCCGCAGAGATCGTTGAGGGAGAAGACAGCGCATACAGTGTGCGATTCGTGCCCCAGGAGATGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CAGGTTCCAGACCAGGGCCACGGGCTGATACCTTGTTaGCATCCCCGAGAGCCATGCCCACATTCACCTCAA +
Preference number: 6 (lower is better)
Translates to: QVPDQGHGLIPC*HPREPCPHSPQ
Trigger: TTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TGCTTTCACCTTGTCTGGGAAGCAGTCTGGTGGGGCTaGCTGGATGTGGGCGATGAAAGGCGAGTCCCGGAT +
Preference number: 6 (lower is better)
Translates to: CFHLVWEAVWWG*LDVGDERRVPD
Trigger: ATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAAGGTGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp ACAGGTTCCAGACCAGGGCCACGGGCTGATACCTTGTaGGCATCCCCGAGAGCCATGCCCACATTCACCTCA +
Preference number: 6 (lower is better)
Translates to: TGSRPGPRADTL*ASPRAMPTFTS
Trigger: TGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GTGCCGTCCGCGTTGTTTTGGATCAGCACCTCCGCTTaGACACCAGCGTCCGACAGGATCTCGATGGTCAGC +
Preference number: 6 (lower is better)
Translates to: VPSALFWISTSA*TPASDRISMVS
Trigger: GCTGACCATCGAGATCCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TGCAGAGGGCTCCCAGGGATATGGTTGCCGTCGTACTaGATCCCCATCTGGTGCAGGCCCTTCTCTGTCGGT +
Preference number: 6 (lower is better)
Translates to: CRGLPGIWLPSY*IPIWCRPFSVG
Trigger: ACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGGGAGCCCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp ACTCGGACTTCACGCTTGGTCTCCCCACCCCGAGTCTaGCTGATCTCTGTCCGCTCTGTGCGGGTGTACGTA +
Preference number: 6 (lower is better)
Translates to: TRTSRLVSPPRV*LISVRSVRVYV
Trigger: TACGTACACCCGCACAGAGCGGACAGAGATCAGCAAGACTCGGGGTGGGGAGACCAAGCGTGAAGTCCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp GAAGGCAGGGCTGTAGGTGATGTGGTAGGTGCCGTCCGCGTTGTTTaGGATCAGCACCTCCGCTTTGACACCAGCGTCCGACAGGATCTC +
Preference number: 6 (lower is better)
Translates to: EGRAVGDVVGAVRVV*DQHLRFDTSVRQDL
Trigger: GAGATCCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGCACCTACCACATCACCTACAGCCCTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp CGGGTGGGGTCACAGCCCTCAGTCACACCCACTCGGAAGGGGCTCTaGGGCACAGCTACTTCGTCATACAGCACCTCTACCAAATGCACA +
Preference number: 6 (lower is better)
Translates to: RVGSQPSVTPTRKGL*GTATSSYSTSTKCT
Trigger: TGTGCATTTGGTAGAGGTGCTGTATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGTGGGTGTGACTGAGGGCTGTGACCCCACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp ACGTTACCCACAGGTTCCAGACCAGGGCCACGGGCTGATACCTTGTaGGCATCCCCGAGAGCCATGCCCACATTCACCTCAAAGGGACTA +
Preference number: 6 (lower is better)
Translates to: TLPTGSRPGPRADTL*ASPRAMPTFTSKGL
Trigger: TAGTCCCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTGGCCCTGGTCTGGAACCTGTGGGTAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp TCGGGTGTGGATACTGTGCAGGTCACCTTCCCCTTGCCTGCTGCCTaGGCGTCCACTGTGATCACAGTCTCCTCTCCGATCTGGATTCTG +
Preference number: 6 (lower is better)
Translates to: SGVDTVQVTFPLPAA*ASTVITVSSPIWIL
Trigger: CAGAATCCAGATCGGAGAGGAGACTGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACACCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp TCAAATCTCCCTTGCCAGCAGCACGGGCATCAATGGTaGACTCGGCAGGCCTGTCCACTATGCAGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: SNLPCQQHGHQW*TRQACPLCSQW
Trigger: CCACTGGCTGCATAGTGGACAGGCCTGCCGAGTTCACCATTGATGCCCGTGCTGCTGGCAAGGGAGATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp TGCCGTCCGCGTTGTTTTGGATCAGCACCTCCGCTTTaGCACCAGCGTCCGACAGGATCTCGATGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: CRPRCFGSAPPL*HQRPTGSRWSA
Trigger: AGCTGACCATCGAGATCCTGTCGGACGCTGGTGTCAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp GGTGTACTCGCCTGGCTCCGTGGGCAGGTAGCTGACTaGACAAGATCCGTCACCATTGTCTTGGCACTCGAT +
Preference number: 6 (lower is better)
Translates to: GVLAWLRGQVAD*TRSVTIVLALD
Trigger: ATCGAGTGCCAAGACAATGGTGACGGATCTTGTGCAGTCAGCTACCTGCCCACGGAGCCAGGCGAGTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp TTGGCCTTCTTGGGTTTACCCTCGGGATCCAGGATCTaGACGGTAAGAAGCCCCTGCCCAGCATCACGAGCA +
Preference number: 6 (lower is better)
Translates to: LAFLGLPSGSRI*TVRSPCPASRA
Trigger: TGCTCGTGATGCTGGGCAGGGGCTTCTTACCGTGCAGATCCTGGATCCCGAGGGTAAACCCAAGAAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp TGTGGATACTGTGCAGGTCACCTTCCCCTTGCCTGCTaGCTTGGCGTCCACTGTGATCACAGTCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: CGYCAGHLPLAC*LGVHCDHSLLS
Trigger: GGAGAGGAGACTGTGATCACAGTGGACGCCAAGGCAGCAGGCAAGGGGAAGGTGACCTGCACAGTATCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TTGTCTGGGAAGCAGTCTGGTGGGGCTGGCTGGATGTaGGCGATGAAAGGCGAGTCCCGGATGTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: LSGKQSGGAGWM*AMKGESRMSSS
Trigger: TGATGAAGACATCCGGGACTCGCCTTTCATCGCCCACATCCAGCCAGCCCCACCAGACTGCTTCCCAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TCTACTCCAGGGCCATATACCTTCACCCGCTCAGGATaGCTGCCTTCTCCCACATTCACCCTGAAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: STPGPYTFTRSG*LPSPTFTLKGL
Trigger: GAGCCCCTTCAGGGTGAATGTGGGAGAAGGCAGCCATCCTGAGCGGGTGAAGGTATATGGCCCTGGAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp AGGACCCTCAGCCTTGACCTTGCTAGCGTCATGGGATaGGTCCACCTTGATGTGGAAGGGACTGGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: RTLSLDLASVMG*VHLDVEGTGRD
Trigger: ATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCATGACGCTAGCAAGGTCAAGGCTGAGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CACAGCCCTCAGTCACACCCACTCGGAAGGGGCTCTTaGGCACAGCTACTTCGTCATACAGCACCTCTACCA +
Preference number: 6 (lower is better)
Translates to: HSPQSHPLGRGS*AQLLRHTAPLP
Trigger: TGGTAGAGGTGCTGTATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGTGGGTGTGACTGAGGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp ATGCAATCTCTGCCTTGCTGGGACCTTCCACAGCGATaGACAATCCCCCAGCACCAGCTTCTCGGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: MQSLPCWDLPQR*TIPQHQLLGSR
Trigger: TCTGGACCCGAGAAGCTGGTGCTGGGGGATTGTCCATCGCTGTGGAAGGTCCCAGCAAGGCAGAGATTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GCTGTAGGTGATGTGGTAGGTGCCGTCCGCGTTGTTTaGGATCAGCACCTCCGCTTTGACACCAGCGTCCGA +
Preference number: 6 (lower is better)
Translates to: AVGDVVGAVRVV*DQHLRFDTSVR
Trigger: TCGGACGCTGGTGTCAAAGCGGAGGTGCTGATCCAAAACAACGCGGACGGCACCTACCACATCACCTACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GCACCGGAGGGGTTGAGGACACGAGCTGTCACATGGTaGCCGCCTGTAGCTGTTAGAGATCTCGCATCCACA +
Preference number: 6 (lower is better)
Translates to: APEGLRTRAVTW*PPVAVRDLAST
Trigger: TGTGGATGCGAGATCTCTAACAGCTACAGGCGGCAACCATGTGACAGCTCGTGTCCTCAACCCCTCCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TCACAGCCCTCAGTCACACCCACTCGGAAGGGGCTCTaGGGCACAGCTACTTCGTCATACAGCACCTCTACC +
Preference number: 6 (lower is better)
Translates to: SQPSVTPTRKGL*GTATSSYSTST
Trigger: GGTAGAGGTGCTGTATGACGAAGTAGCTGTGCCCAAGAGCCCCTTCCGAGTGGGTGTGACTGAGGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp GCCGTCACCTTTGTCATCACATTCAATCTTGGCTTGTaGGGGCCCCTCGATGGAGAAGCCCAGCGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: AVTFVITFNLGL*GPLDGEAQRSH
Trigger: GTGGGAACGCTGGGCTTCTCCATCGAGGGGCCCTCACAAGCCAAGATTGAATGTGATGACAAAGGTGACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CACGGGCTGATACCTTGTTGGCATCCCCGAGAGCCATaGCCACATTCACCTCAAAGGGACTACGCTCGATGT +
Preference number: 6 (lower is better)
Translates to: HGLIPCWHPREP*PHSPQRDYARC
Trigger: ACATCGAGCGTAGTCCCTTTGAGGTGAATGTGGGCATGGCTCTCGGGGATGCCAACAAGGTATCAGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CTGCCACTTGGAAGGTTTGTCCCTCGGAAAGGCCTTTaGCCCAGACTCGAACTTTGCTGGCATCCCCGATCT +
Preference number: 6 (lower is better)
Translates to: LPLGRFVPRKGL*PRLELCWHPRS
Trigger: AGATCGGGGATGCCAGCAAAGTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp AGGGCCTTCGATGCTCAGCCCCAGGCCTCCATAACCTaGATTGCGAGTGTCCACAATGAACTCTGCCACTTG +
Preference number: 6 (lower is better)
Translates to: RAFDAQPQASIT*IASVHNELCHL
Trigger: CAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGTTATGGAGGCCTGGGGCTGAGCATCGAAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CACACCACGTGCCCCATTAAGCTGCACCGCGAAAGATaGTGGCTGGTTCACTTTAAGCCCTGTCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: HTTCPIKLHRER*WLVHFKPCLLE
Trigger: CTCCAGGAGACAGGGCTTAAAGTGAACCAGCCAGCATCTTTCGCGGTGCAGCTTAATGGGGCACGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CCAGGTGATGGTCACCACATACTTCCCAGGTACCACTaGGTAGTACTCGCACTCGAACACCCCATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PGDGHHILPRYH*VVLALEHPISS
Trigger: GCTGGAGATGGGGTGTTCGAGTGCGAGTACTACCCAGTGGTACCTGGGAAGTATGTGGTGACCATCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp ACCTTGCTAGCGTCATGGGATGGGTCCACCTTGATGTaGAAGGGACTGGCAGGGATCTCCTGGTTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: TLLASWDGSTLM*KGLAGISWLAN
Trigger: GTTTGCCAACCAGGAGATCCCTGCCAGTCCCTTCCACATCAAGGTGGACCCATCCCATGACGCTAGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TTAGCACCGGAGGGGTTGAGGACACGAGCTGTCACATaGTTGCCGCCTGTAGCTGTTAGAGATCTCGCATCC +
Preference number: 6 (lower is better)
Translates to: LAPEGLRTRAVT*LPPVAVRDLAS
Trigger: GGATGCGAGATCTCTAACAGCTACAGGCGGCAACCATGTGACAGCTCGTGTCCTCAACCCCTCCGGTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CCAGGGATATGGTTGCCGTCGTACTTGATCCCCATCTaGTGCAGGCCCTTCTCTGTCGGTGCGTATCTCACT +
Preference number: 6 (lower is better)
Translates to: PGIWLPSYLIPI*CRPFSVGAYLT
Trigger: AGTGAGATACGCACCGACAGAGAAGGGCCTGCACCAGATGGGGATCAAGTACGACGGCAACCATATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp TCATTGCCTGAAGGAGCACGGATGCTGGCTGTCAGCTaGCTGAGGTCACCCTCCGTGATCTTCAGTGACACA +
Preference number: 6 (lower is better)
Translates to: SLPEGARMLAVS*LRSPSVIFSDT
Trigger: TGTGTCACTGAAGATCACGGAGGGTGACCTCAGCCAGCTGACAGCCAGCATCCGTGCTCCTTCAGGCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GAACTCCAGGGCCACAGACACATTTTCCAGCTTCATTaGGCGGAAGTTGGGGCGCGGGTGGAACTTGCGGTA +
Preference number: 6 (lower is better)
Translates to: ELQGHRHIFQLH*AEVGARVELAV
Trigger: TACCGCAAGTTCCACCCGCGCCCCAACTTCCGCCAAATGAAGCTGGAAAATGTGTCTGTGGCCCTGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TTGTCAATGATTTCAAAGTCCCGCACAGCCTCGCCCTaGGCTGCCCCAGCAAAGTGCACGTCCAGCTTAGCC +
Preference number: 6 (lower is better)
Translates to: LSMISKSRTASP*AAPAKCTSSLA
Trigger: GGCTAAGCTGGACGTGCACTTTGCTGGGGCAGCCAAGGGCGAGGCTGTGCGGGACTTTGAAATCATTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TCTGCCACTTGGAAGGTTTGTCCCTCGGAAAGGCCTTaGCCCCAGACTCGAACTTTGCTGGCATCCCCGATC +
Preference number: 6 (lower is better)
Translates to: SATWKVCPSERP*PQTRTLLASPI
Trigger: GATCGGGGATGCCAGCAAAGTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS TCA 72 bp AAGGTGCGAGTCAGGCGCTCCTGGGCAGACACCATCTaGAACCAGTTTCCTGGGATCTTGAGGTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: KVRVRRSWADTI*NQFPGILRLRS
Trigger: TGACCTCAACCTCAAGATCCCAGGAAACTGGTTTCAGATGGTGTCTGCCCAGGAGCGCCTGACTCGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CACACTGTATGCGCTGTCTTCTCCCTCAACGATCTCTaGGGCTTCTGTCTTGCCAGACGGACTTGTCACCTG +
Preference number: 6 (lower is better)
Translates to: HTVCAVFSLNDL*GFCLARRTCHL
Trigger: CAGGTGACAAGTCCGTCTGGCAAGACAGAAGCCGCAGAGATCGTTGAGGGAGAAGACAGCGCATACAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CATAGGTGCGGTCTTTGTCATTGTTGGGAACCACTTTaGCCTCCTCCGTGTGTCCCTCGGGGTCCTCAATGT +
Preference number: 6 (lower is better)
Translates to: HRCGLCHCWEPL*PPPCVPRGPQC
Trigger: ACATTGAGGACCCCGAGGGACACACGGAGGAGGCCAAAGTGGTTCCCAACAATGACAAAGACCGCACCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CATCACATTCAATCTTGGCTTGTGAGGGCCCCTCGATaGAGAAGCCCAGCGTTCCCACTTCTGTACCGATGG +
Preference number: 6 (lower is better)
Translates to: HHIQSWLVRAPR*RSPAFPLLYRW
Trigger: CCATCGGTACAGAAGTGGGAACGCTGGGCTTCTCCATCGAGGGGCCCTCACAAGCCAAGATTGAATGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp GGCTTCAGCAAACAGGATATTGATGGTGTACTCGCCTaGCTCCGTGGGCAGGTAGCTGACTGCACAAGATCC +
Preference number: 6 (lower is better)
Translates to: GFSKQDIDGVLA*LRGQVADCTRS
Trigger: GGATCTTGTGCAGTCAGCTACCTGCCCACGGAGCCAGGCGAGTACACCATCAATATCCTGTTTGCTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CCTGCATTGCGAGTGTCCACAATGAACTCTGCCACTTaGAAGGTTTGTCCCTCGGAAAGGCCTTTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PALRVSTMNSAT*KVCPSERPLPQ
Trigger: CTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TTGAGTTCCCCGCTGCCAGCACCCTTGGTGAACACCTaGAAGTCAGCCACCTCTTTCACACGCACACCTTTG +
Preference number: 6 (lower is better)
Translates to: LSSPLPAPLVNT*KSATSFTRTPL
Trigger: CAAAGGTGTGCGTGTGAAAGAGGTGGCTGACTTCAAGGTGTTCACCAAGGGTGCTGGCAGCGGGGAACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp GTACCGTCTTCCATATCCTCACAGTTAATGTCCACCTaGCTAGGGCCTTCGATGCTCAGCCCCAGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: VPSSISSQLMST*LGPSMLSPRPP
Trigger: TGGAGGCCTGGGGCTGAGCATCGAAGGCCCTAGCAAGGTGGACATTAACTGTGAGGATATGGAAGACGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp TCTGTCTTAGCACCGGAGGGGTTGAGGACACGAGCTGTCACATGGTaGCCGCCTGTAGCTGTTAGAGATCTCGCATCCACAGTAAACTCG +
Preference number: 6 (lower is better)
Translates to: SVLAPEGLRTRAVTW*PPVAVRDLASTVNS
Trigger: CGAGTTTACTGTGGATGCGAGATCTCTAACAGCTACAGGCGGCAACCATGTGACAGCTCGTGTCCTCAACCCCTCCGGTGCTAAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp ACCTGCATTGCGAGTGTCCACAATGAACTCTGCCACTTGGAAGGTTaGTCCCTCGGAAAGGCCTTTGCCCCAGACTCGAACTTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TCIASVHNELCHLEG*SLGKAFAPDSNFAG
Trigger: GCCAGCAAAGTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 90 bp GCCTCCATAACCTGCATTGCGAGTGTCCACAATGAACTCTGCCACTaGGAAGGTTTGTCCCTCGGAAAGGCCTTTGCCCCAGACTCGAAC +
Preference number: 6 (lower is better)
Translates to: ASITCIASVHNELCH*EGLSLGKAFAPDSN
Trigger: GTTCGAGTCTGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGTTATGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp CACCCTCTTCATAGGCAGTGTACTGCACCCGGTAGGTaGCATCCCCGTTGTCTGTCACATAGGTATCTGTCT +
Preference number: 6 (lower is better)
Translates to: HPLHRQCTAPGR*HPRCLSHRYLS
Trigger: AGACAGATACCTATGTGACAGACAACGGGGATGGCACCTACCGGGTGCAGTACACTGCCTATGAAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp CAAAGAGCACGGTCACCTTGTGTAACCCAGCAACCTTaGGCACATAGGAGACGGCATAGGTGCGGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: QRARSPCVTQQP*AHRRRHRCGLC
Trigger: ACAAAGACCGCACCTATGCCGTCTCCTATGTGCCCAAGGTTGCTGGGTTACACAAGGTGACCGTGCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp TATGTGCCATCCCCATTGTCTCGGATGTTGGCCTTCTaGGGTTTACCCTCGGGATCCAGGATCTGCACGGTA +
Preference number: 6 (lower is better)
Translates to: YVPSPLSRMLAF*GLPSGSRICTV
Trigger: TACCGTGCAGATCCTGGATCCCGAGGGTAAACCCAAGAAGGCCAACATCCGAGACAATGGGGATGGCACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CAA 72 bp ACCTGCATTGCGAGTGTCCACAATGAACTCTGCCACTaGGAAGGTTTGTCCCTCGGAAAGGCCTTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: TCIASVHNELCH*EGLSLGKAFAP
Trigger: TGGGGCAAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp GTTGAGGCCTTGAACTTTGACTTTGCTGAGGTCCAGTaGGGGTGCCACATTCACCACAAAGGGACTTTTGGG +
Preference number: 6 (lower is better)
Translates to: VEALNFDFAEVQ*GCHIHHKGTFG
Trigger: CCCAAAAGTCCCTTTGTGGTGAATGTGGCACCCCCACTGGACCTCAGCAAAGTCAAAGTTCAAGGCCTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS GCA 72 bp TCCATAACCTGCATTGCGAGTGTCCACAATGAACTCTaGCACTTGGAAGGTTTGTCCCTCGGAAAGGCCTTT +
Preference number: 6 (lower is better)
Translates to: SITCIASVHNEL*HLEGLSLGKAF
Trigger: AAAGGCCTTTCCGAGGGACAAACCTTCCAAGTGGCAGAGTTCATTGTGGACACTCGCAATGCAGGTTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9
CDS CCA 72 bp ATGGGATGGAAGCACTTTGATCTTGAAAGGGCTTCGTaGCACCTCCTGGTCAGCATACTTGACAGCTACAGT +
Preference number: 6 (lower is better)
Translates to: MGWKHFDLERAS*HLLVSILDSYS
Trigger: ACTGTAGCTGTCAAGTATGCTGACCAGGAGGTGCCACGAAGCCCTTTCAAGATCAAAGTGCTTCCATCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065090.8
ENSMUST00000101617.9