RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FLII (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002812

Ensembl transcript IDs: ENSMUST00000002889.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGACACACTGGTGGGGCTTGGGGCTGTGTGCTGCTTGCAGGCTGTaGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGG +
Preference number: 1 (lower is better)
Translates to: WTHWWGLGLCAACRL*LAEAGTRSPPLPHW
Trigger: CCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAAGCCCCACCAGTGTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
3UTR GCA 90 bp GCACACATGTGGACACACTGGTGGGGCTTGGGGCTGTGTGCTGCTTaGAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: AHMWTHWWGLGLCAA*RLWLAEAGTRSPPL
Trigger: AAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAAGCCCCACCAGTGTGTCCACATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCAGCAGCAGCCACTGTaGCCGGGGAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRQQQPL*PGRRPP
Trigger: TGGCGGGCGCCTCCCCGGCCACAGTGGCTGCTGCTG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCGTGGAAGCAGCGGGTaGAGGCGCGCTGCTCATTAC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPRGSSG*RRAAHY
Trigger: GTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCACTCCTCCATCAGCTaGTCTGCCTCAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPHSSIS*SASARG
Trigger: GCCCCTGGCTGAGGCAGAGCAGCTGATGGAGGAGTG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGGCCCTCCAGGCTGGTaGGGAGGTTGCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRGPPGW*GGCSGC
Trigger: GCACCCAGAGCAACCTCCCCACCAGCCTGGAGGGCC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGAGAGGCCCTGGCCCTaGAGCACAGCCTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPERPWP*STASAF
Trigger: GAATGCAGAGGCTGTGCTTCAGGGCCAGGGCCTCTC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCTGGCAGTCGAGTaGACTTGCGGCCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSPLAVE*TCGPPA
Trigger: TGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCTCCATCAGCTGCTCTaGCTCAGCCAGGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLHQLL*LSQGHG
Trigger: CCCATGCCCCTGGCTGAGGCAGAGCAGCTGATGGAG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCTCTGCCTCCGCTGCTaGTTCCTCCCCTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLCLRC*FLPFSG
Trigger: GCCAGAGAAGGGGAGGAAGCAGCAGCGGAGGCAGAG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCTCCTCTGCCTCCGCTaGTGCTTCCTCCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPLLCLR*CFLPFS
Trigger: AGAGAAGGGGAGGAAGCAGCAGCGGAGGCAGAGGAG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTCTGGATGCACCGGGTaGAGAGGGCACTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSGCTG*RGHCRW
Trigger: CCAACGGCAGTGCCCTCTGCACCCGGTGCATCCAGA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGCTGCTCATTACCTTTaGGGACCAGGCGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPAAHYL*GPGAGD
Trigger: GTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAACCCTGGGGGCTCTTaGCCCTGCACCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPNPGGS*PCTRSV
Trigger: CACACTCCTGGTGCAGGGCCAAGAGCCCCCAGGGTT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCACATCCCAGAACCCTaGGGGCTCTTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSHIPEP*GLLALH
Trigger: GTGCAGGGCCAAGAGCCCCCAGGGTTCTGGGATGTG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTTGGCCTTGAACACCTaGGCCTCGGTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLALNT*ASVPSR
Trigger: CCTGGAGGGCACCGAGGCCCAGGTGTTCAAGGCCAA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCTGAAGGCAGGGAGGTaGGCTGGTTCCGGGACAGAT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLKAGR*AGSGTD
Trigger: ATCTGTCCCGGAACCAGCTCACCTCCCTGCCTTCAG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGCACGAAGCCCTCCATaGCATCCAGGTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPARSPP*HPGPHS
Trigger: GGAATGAGGACCTGGATGGCATGGAGGGCTTCGTGC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCCCTTCTCTGGCCTCTaGCGAGGCCTTCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRPFSGL*RGLPLL
Trigger: AAGGAGGGGAAGGCCTCGGCAGAGGCCAGAGAAGGG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGGGTGCAGAGGGCACTaGCGTTGGTGCGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSGCRGH*RWCGSD
Trigger: ATCAGATCCGCACCAACGGCAGTGCCCTCTGCACCC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTCTGTAGGGCCATCATaGCTGGGAGCTGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSVGPS*LGAAGA
Trigger: AGCTCCGGCAGCTCCCAGCCATGATGGCCCTACAGA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTCCAGGTGCACCCACTaGTCGATGCACAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPSRCTH*SMHRDS
Trigger: GCTGTCCCTGTGCATCGACCAGTGGGTGCACCTGGA...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGGCTTCTCCAGGCCCTaGTCCCAGCGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSGFSRP*SQRRTF
Trigger: AAAGGTACGACGCTGGGACCAGGGCCTGGAGAAGCC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCGAGTAGTCAAGGCGTaGCTTCTCCAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRVVKA*LLQALV
Trigger: GACCAGGGCCTGGAGAAGCCACGCCTTGACTACTCG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTTCCTCCCCTTCTCTaGCCTCTGCCGAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLPPLL*PLPRPS
Trigger: GGAAGGCCTCGGCAGAGGCCAGAGAAGGGGAGGAAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGAACGTGCTCCAGGCGTaGAAGCAGCGGGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRNVLQA*KQRVKA
Trigger: CGCCTTCACCCGCTGCTTCCACGCCTGGAGCACGTT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCAGGCTTGGGCGGCATaGCCAAGCTGGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRQAWAA*PSWGFL
Trigger: GAGAAAACCCCAGCTTGGTCATGCCGCCCAAGCCTG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCCTGCACCAGGAGTGTaGTTTCCGCCTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPPAPGV*FPPSLS
Trigger: GGAAAGGGAAGGCGGAAATCACACTCCTGGTGCAGG...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCACATCTGAAAGGTTaGTCAGGCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSPHLKG*SGPPGW
Trigger: CCAGCCTGGAGGGCCTGAGCAACCTTTCAGATGTGG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGCACCCACTGGTCGATaGACAGGGACAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSAPTGR*TGTALQ
Trigger: TTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGTGC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCCTGTGCTGAGTCCTTaGGCCTCCGTAGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRPVLSP*ASVAAS
Trigger: AGATGCGGCTACGGAGGCGCAAGGACTCAGCACAGG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTGTCCAGTAGGCTCTaGAGCAGCCTCATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVSSRL*SSLIPG
Trigger: GCCAGGAATGAGGCTGCTGCAGAGCCTACTGGACAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAAGTCCTCCTCTGGCTaGTTCTCCTCTGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPKSSSG*FSSASA
Trigger: AGCGGAGGCAGAGGAGAAGCAGCCAGAGGAGGACTT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGGGCACTGCCGTTGGTaGGGATCTGATAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRGHCRW*GSDRGS
Trigger: CGACCCTCTATCAGATCCGCACCAACGGCAGTGCCC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTTCAGGATGTCCTCTaGCAGCTTGGCTTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVQDVL*QLGFVG
Trigger: CCCGACGAAGCCAAGCTGGCAGAGGACATCCTGAAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGTTCGCCGTGAAGCGTaGTCAGATGGTTGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPVRREA*SDGCGS
Trigger: TGAGCCACAACCATCTGACCACGCTTCACGGCGAAC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAGAGGGCACTGCCGTTaGTGCGGATCTGATAGAGGG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPRGHCR*CGSDRG
Trigger: CCCTCTATCAGATCCGCACCAACGGCAGTGCCCTCT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGATTCCTCCAGGCTGGTaGGCTTGCCGATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRIPPGW*ACRCQK
Trigger: CTTCTGGCATCGGCAAGCTCACCAGCCTGGAGGAAT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGCTCCTGGCCAAGTTTaGGTGCTGCTGCACGCACTA +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRAPGQV*VLLHAL
Trigger: TAGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGGTAGCAGAGGCCTGTaGGATTCAGCTTTAGCCATC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPGSRGL*DSALAI
Trigger: GATGGCTAAAGCTGAATCGCACAGGCCTCTGCTACC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTGGCTCACAGACAGGTaGTCCAGCTTCTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRWLTDR*SSFCRA
Trigger: GGCTCTGCAGAAGCTGGAGCACCTGTCTGTGAGCCA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCTGAAGAGCCTCGTGTaGTTCATGTACTCCGCATCG +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPLKSLV*FMYSAS
Trigger: CGATGCGGAGTACATGAAGCACACGAGGCTCTTCAG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTGGTCAGATGGTTGTaGCTCACAGACAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVVRWL*LTDRCS
Trigger: GGAGCACCTGTCTGTGAGCCACAACCATCTGACCAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGCACCAGCATGTTCTTaGCATTCTCCAGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSAPACS*HSPAPV
Trigger: CACGGGAGCTGGAGAATGCCAAGAACATGCTGGTGC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGAGTCGATGCCGTTGTaGCTGAGGTTGAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRESMPL*LRLSTS
Trigger: GCTGGTGCTCAACCTCAGCCACAACGGCATCGACTC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGACAGCTGGTTGGGGATaGAGTCGATGCCGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRTAGWG*SRCRCG
Trigger: GCCACAACGGCATCGACTCCATCCCCAACCAGCTGT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTCGTACCTTTCCCCCTaGTGCCCGGGCATCTATGCT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRSYLSP*CPGIYA
Trigger: AGCATAGATGCCCGGGCACCAGGGGGAAAGGTACGA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCAGGCGCAGGCGACGTaGCCGCTCATGTTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRQAQAT*PLMFFR
Trigger: TCTAAAGAACATGAGCGGCCACGTCGCCTGCGCCTG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTTGCTCTGGGTGCGTTaGGTGTTCCTCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLLWVR*VFLRCR
Trigger: CCTGCATCTGAGGAACACTCAACGCACCCAGAGCAA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCAGCTTGTTGGAGTTaGGGTACAGCTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPPACWS*GTASSA
Trigger: AGCTGAAGAAGCTGTACCTCAACTCCAACAAGCTGG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTAGTGAGGACCCTTTaGGGGGCACAGGCTCCAATT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLVRTL*GAQAPI
Trigger: AATTGGAGCCTGTGCCCCTCAAAGGGTCCTCACTAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCTGAGAGCTTGTAGTTaGTCTGCGGAAGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPLRACS*SAEAPS
Trigger: ACTTGGAGCTTCCGCAGATCAACTACAAGCTCTCAG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGTAGGAAGAGTGCAGTaGGGTCAGCCTTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSVGRVQ*GQPSSG
Trigger: ACCAGATGAAGGCTGACCTCACTGCACTCTTCCTAC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGGTGCTCCAGCTTCTaGAGAGCCGCAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRCSSF*RAASSS
Trigger: TGAAGAACTTGCGGCTCTGCAGAAGCTGGAGCACCT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGCACAGGGACAGCTCTaGAATCTGGTTGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPAQGQL*NLVATE
Trigger: CTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTATGCCCTTTAGCACTTaGTTGGCCTGGACATCCTGT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPMPFST*LAWTSC
Trigger: ACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCAT...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCTGAAGCACAGCCTCTaGATTCCGTGTGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLKHSL*IPCVVH
Trigger: GTGGACTACACACGGAATGCAGAGGCTGTGCTTCAG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCAGGTACCCAGTACCTaGAGAGGAAGACATAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPQVPST*RGRHSS
Trigger: ACTGCTATGTCTTCCTCTGCAGGTACTGGGTACCTG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCCAGGCATACACAATaGCTTGGTTGTCCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPPRHTQ*LGCPRF
Trigger: AAAGCGAGGACAACCAAGGCATTGTGTATGCCTGGG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGACAGCTCTGCAATCTaGTTGCTACTGAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPDSSAI*LLLRLR
Trigger: CCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTGTCAGGAAGTGGATaGCCTCAGGAAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLSGSG*PQEGSP
Trigger: TGGTGACCCTTCCTGAGGCCATCCACTTCCTGACAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGCTTCTTCAGCTTGGTaGGCTTGCAGATGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRASSAW*ACRWLK
Trigger: CTTCAGCCATCTGCAAGCTCACCAAGCTGAAGAAGC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCAGGCACATGATTCTTaGTCTCAGAAGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSQAHDS*SQKALH
Trigger: GTGGAGAGCCTTCTGAGATCAAGAATCATGTGCCTG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTCAGACTCAGTTTaGTCTCCACTTGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPPSDSV*SPLGLS
Trigger: AGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGTGCCCGGGCATCTATaGTTTCCTCTTGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPVPGHL*FPLGFC
Trigger: ACAAAAACCAAGAGGAAAGCATAGATGCCCGGGCAC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCAGCCTCGTAGAACTTaGCATGGAAGGCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSQPRRT*HGRLLP
Trigger: TGGAAGAAGCCTTCCATGGCAAGTTCTACGAGGCTG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGTACTACCTCCAGCTTaGCAGGGAAGAGGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRVLPPA*QGRGSQ
Trigger: TTGAGAGCCTCTTCCCTGGCAAGCTGGAGGTAGTAC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTTGGGGTTCTCCTGCTaGTGTGTCATACGTACTACC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPLGFSC*CVIRTT
Trigger: GGTAGTACGTATGACACAGCAGCAGGAGAACCCCAA...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAGGTTGATGAACAGCTaGTTGGGGATGGAGTCGATG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPRLMNS*LGMESM
Trigger: CATCGACTCCATCCCCAACCAGCTGTTCATCAACCT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGTTTGATCTCCACTTaGCTTGTCTGGGTCCCAACC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSLIST*LVWVPT
Trigger: GGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGAGATCATCCAGCTTaGAGATGTCATCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRDHPA*RCHQGL
Trigger: GAGTCCCTGATGACATCTTCAAGCTGGATGATCTCT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGAGCAGAACTCAGAGTTaGGAAGGCTGGAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRSRTQS*EGWSQC
Trigger: ACACTGACTCCAGCCTTCTCAACTCTGAGTTCTGCT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCATTGTCTAGCAGCATaGTGTCATCGTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRHCLAA*CHRLPG
Trigger: ACCTGGCAGACGATGACATCATGCTGCTAGACAATG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGGGCAACATCTGACATaGCCTTTAGCACTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRGQHLT*PLALAW
Trigger: CCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGCCAGAAGTAAACGATaGACTGAAAGTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPARSKR*TESPPL
Trigger: CAGAGGAGGACTTTCAGTGCATCGTTTACTTCTGGC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGGGCATTCTGTCAACTaGTTATGGCTCAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPGHSVN*LWLKSR
Trigger: TCTGGACTTGAGCCATAACCAGTTGACAGAATGCCC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGAGTTTCTTCAGTTTTaGGCACCTGCAGAGACTTTC +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPEFLQF*APAETF
Trigger: GAAAGTCTCTGCAGGTGCCCAAAACTGAAGAAACTC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCAGTATAGAAGCCACTaGCTGTTCCGCCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPQYRSH*LFRLQC
Trigger: ACATTGAAGGCGGAACAGCCAGTGGCTTCTATACTG...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTTGTATAGCTTGGGCTaGGGTGGCCAAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSLYSLG*GGQKSS
Trigger: TGATGACTTTTGGCCACCCCAGCCCAAGCTATACAA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGATCCCACATAGCTCCTaGCCAAGTTTGAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRIPHSS*PSLSAA
Trigger: AGCAGCACTCAAACTTGGCCAGGAGCTATGTGGGAT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGGTCAGCCTTCATCTaGTCTGTCTTCTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRSAFI*SVFSVS
Trigger: TGACACTGAGAAGACAGACCAGATGAAGGCTGACCT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGAATGGGATAGGAACTTaGGGTTCTCCTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRNGIGT*GSPAAV
Trigger: CACAGCAGCAGGAGAACCCCAAGTTCCTATCCCATT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTGCTGGATGTATACCTaGCAAGCCTTCAGACTCAGT +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSCWMYT*QAFRLS
Trigger: ACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTTAGAGCGTGTGTGCTaGATGTATACCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLERVC*MYTWQA
Trigger: GGCTTGCCAGGTATACATCCAGCACACACGCTCTAA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTTTCCTCTTGCCTCGGTaGATGATGAACTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPFLLPR*MMNFLL
Trigger: CAAAAGAAAGTTCATCATTCACCGAGGCAAGAGGAA...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTTTCTGTGCACCAATaGCTACCCAGAAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVSVHQ*LPRRSS
Trigger: AGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTATCATAGGGTTTCTGTaGACCAATGCCTACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPIIGFL*TNAYPE
Trigger: TTCTGGGTAGGCATTGGTGCACAGAAACCCTATGAT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCATGATGTCATCGTCTaGCAGGTCATCTTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSHDVIV*QVILAK
Trigger: TTTTGCCAAGATGACCTGGCAGACGATGACATCATG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCCAGAAGAAGTTCTCTaGCTCCTCGCCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRPEEVL*LLAFID
Trigger: ATCAATGAAGGCGAGGAGCCAGAGAACTTCTTCTGG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTCTGCCAGGTCATCTTaGCAAAAGTCAGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPSARSS*QKSEHF
Trigger: GAAATGCTCTGACTTTTGCCAAGATGACCTGGCAGA...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGCACAGGCTCCAATTTaGTGTTCTTTTTCCCATATA +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSAQAPI*CSFSHI
Trigger: TATATGGGAAAAAGAACATCAAATTGGAGCCTGTGC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR TCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTCTCAAACTTCTTCTaGAGACTGAATGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLSNFF*RLNVKV
Trigger: GACCTTCACATTCAGTCTTCAGAAGAAGTTTGAGAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGCATTTCTCAGTCACTaGGAAGTAACCCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRAFLSH*EVTLLI
Trigger: AATGAGAAGGGTTACTTCGCAGTGACTGAGAAATGC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTTTTTGTTTTTCTCCTaGGCAACATCTGACATGCCC +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRFLFFS*ATSDMP
Trigger: GGGCATGTCAGATGTTGCCCAGGAGAAAAACAAAAA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTTGTTTATTTTCTCTaGAAAGAGCCTGGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLVYFL*KEPGLS
Trigger: ACTAAGGCCAGGCTCTTTGCAGAGAAAATAAACAAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR GCA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGCTGTTTGCTGTAGGATaGATCAAACATAGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRLFAVG*IKHSVQ
Trigger: CTGAACACTATGTTTGATGCATCCTACAGCAAACAG...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CCA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAACTTTCTTTTGAAATaGGATAGGAACTTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSNFLLK*DRNLGF
Trigger: GAACCCCAAGTTCCTATCCCATTTCAAAAGAAAGTT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp AGGGGTCCTTGGACCCGCTCCCTACAGCTGCAGCAGCAGCCACTGTaGCCGGGGAGGCGCCCGCCAGCCTCAGCTGGTTCTGTAGCGAGA +
Preference number: 5 (lower is better)
Translates to: RGPWTRSLQLQQQPL*PGRRPPASAGSVAR
Trigger: TCTCGCTACAGAACCAGCTGAGGCTGGCGGGCGCCTCCCCGGCCACAGTGGCTGCTGCTGCAGCTGTAGGGAGCGGGTCCAAGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp AGGCTGGGGCTTGGCGGAACGTGCTCCAGGCGTGGAAGCAGCGGGTaGAGGCGCGCTGCTCATTACCTTTGCGGACCAGGCGCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: RLGLGGTCSRRGSSG*RRAAHYLCGPGAGD
Trigger: GTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACGCCTGGAGCACGTTCCGCCAAGCCCCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp TGGCGGAACGTGCTCCAGGCGTGGAAGCAGCGGGTGAAGGCGCGCTaGTCATTACCTTTGCGGACCAGGCGCAGGCGACGTGGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: WRNVLQAWKQRVKAR*SLPLRTRRRRRGRS
Trigger: TGAGCGGCCACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACGCCTGGAGCACGTTCCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp CCTGGACATCCTGTGCTGAGTCCTTGCGCCTCCGTAGCCGCATCTTaGGAGCCAAGGGGTCCTTGGACCCGCTCCCTACAGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PGHPVLSPCASVAAS*EPRGPWTRSLQLQQ
Trigger: CTGCTGCAGCTGTAGGGAGCGGGTCCAAGGACCCCTTGGCTCGCAAGATGCGGCTACGGAGGCGCAAGGACTCAGCACAGGATGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCACCCTTGAAGTCGTaGCCGCTGAGGTCCACGCCG +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPPPLKS*PLRSTP
Trigger: CGGCGTGGACCTCAGCGGCAACGACTTCAAGGGTGG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTGTGCGGTCAGCAGGCTaGGGCGGCATGACCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPVRSAG*GGMTKL
Trigger: CAGCTTGGTCATGCCGCCCAAGCCTGCTGACCGCAC...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGTCAGCCAGCCCATGTaGGAGGCCTCCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRVSQPM*EASRPC
Trigger: GCAGGGCCGGGAGGCCTCCAACATGGGCTGGCTGAC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp TATGTCGTGGCCGGTGTAGCATCCCACATAGCTCCTGGCCAAGTTTaGGTGCTGCTGCACGCACTAGGCGTGGGGACTTGCGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: YVVAGVASHIAPGQV*VLLHALGVGTCGPA
Trigger: GGCTGGGCCGCAAGTCCCCACGCCTAGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGCTATGTGGGATGCTACACCGGCCACGACATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp CAAGGTCTCCAGGTGCACCCACTGGTCGATGCACAGGGACAGCTCTaGAATCTGGTTGCTACTGAGGTTGAGGCGGCGCAGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: QGLQVHPLVDAQGQL*NLVATEVEAAQAGE
Trigger: CTCCCCAGCCTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGTGCACCTGGAGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TCCAGGTGCACCCACTGGTCGATGCACAGGGACAGCTCTGCAATCTaGTTGCTACTGAGGTTGAGGCGGCGCAGGCTGGGGAGGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SRCTHWSMHRDSSAI*LLLRLRRRRLGRVY
Trigger: GTACACCCTCCCCAGCCTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGTGCACCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp CAGCTGGCCCACATCCTCCGTAAAGAACTCCGAGTAGTCAAGGCGTaGCTTCTCCAGGCCCTGGTCCCAGCGTCGTACCTTTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: QLAHILRKELRVVKA*LLQALVPASYLSPW
Trigger: CCAGGGGGAAAGGTACGACGCTGGGACCAGGGCCTGGAGAAGCCACGCCTTGACTACTCGGAGTTCTTTACGGAGGATGTGGGCCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCGAGCCAAGGGGTCCTaGGACCCGCTCCCTACAGCT +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRAKGS*DPLPTA
Trigger: AGCTGTAGGGAGCGGGTCCAAGGACCCCTTGGCTCG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCGCTGCTCATTACCTTaGCGGACCAGGCGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPRCSLP*RTRRRR
Trigger: TCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp GGCTGGGGAGGGTGTACAGGCACTCCGGCACCCTTGTCAAGTCATTaGACGACAGGTCCACATCTGAAAGGTTGCTCAGGCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GWGGCTGTPAPLSSH*TTGPHLKGCSGPPG
Trigger: GCCTGGAGGGCCTGAGCAACCTTTCAGATGTGGACCTGTCGTGCAATGACTTGACAAGGGTGCCGGAGTGCCTGTACACCCTCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTCCTGTGCTGAGTCCTaGCGCCTCCGTAGCCGCATC +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSCAES*RLRSRI
Trigger: GATGCGGCTACGGAGGCGCAAGGACTCAGCACAGGA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGGAACCCTGGGGGCTCTaGGCCCTGCACCAGGAGTGT +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLREPWGL*ALHQEC
Trigger: ACACTCCTGGTGCAGGGCCAAGAGCCCCCAGGGTTC...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp CGAGCTACAATGGCCCGAAGCGAAGGCAGGCTAGACAGTTCGCCGTaGAGCGTGGTCAGATGGTTGTGGCTCACAGACAGGTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RATMARSEGRLDSSP*SVVRWLWLTDRCSS
Trigger: GCTGGAGCACCTGTCTGTGAGCCACAACCATCTGACCACGCTTCACGGCGAACTGTCTAGCCTGCCTTCGCTTCGGGCCATTGTAGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp ACGACAGGTCCACATCTGAAAGGTTGCTCAGGCCCTCCAGGCTGGTaGGGAGGTTGCTCTGGGTGCGTTGAGTGTTCCTCAGATGCAGGG +
Preference number: 5 (lower is better)
Translates to: TTGPHLKGCSGPPGW*GGCSGCVECSSDAG
Trigger: CCCTGCATCTGAGGAACACTCAACGCACCCAGAGCAACCTCCCCACCAGCCTGGAGGGCCTGAGCAACCTTTCAGATGTGGACCTGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp GGGGGCTGCCGAGGTAGGAAGAGTGCAGTGAGGTCAGCCTTCATCTaGTCTGTCTTCTCAGTGTCACGCTTCACCTTCCCAGAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GGCRGRKSAVRSAFI*SVFSVSRFTFPERP
Trigger: GGGCCTCTCTGGGAAGGTGAAGCGTGACACTGAGAAGACAGACCAGATGAAGGCTGACCTCACTGCACTCTTCCTACCTCGGCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGACCCAGGCCCACCTaGTATAGCTTGGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRPRPT*YSLGWG
Trigger: ACCCCAGCCCAAGCTATACAAGGTGGGCCTGGGTCT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCGTACTACCTCCAGCTaGCCAGGGAAGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPRTTSS*PGKRLS
Trigger: TGAGAGCCTCTTCCCTGGCAAGCTGGAGGTAGTACG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTATGTCCTCTGCCAGCTaGGCTTCGTCGGGGTCTGAT +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPMSSAS*ASSGSD
Trigger: ATCAGACCCCGACGAAGCCAAGCTGGCAGAGGACAT...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp CAATGTTGTACCACTCGGCGGTGCGGTCAGCAGGCTTGGGCGGCATaGCCAAGCTGGGGTTTTCTCGAACATCCAGGACCTGGATCTCTG +
Preference number: 5 (lower is better)
Translates to: QCCTTRRCGQQAWAA*PSWGFLEHPGPGSL
Trigger: CAGAGATCCAGGTCCTGGATGTTCGAGAAAACCCCAGCTTGGTCATGCCGCCCAAGCCTGCTGACCGCACCGCCGAGTGGTACAACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp GTGCTGCTGCACGCACTAGGCGTGGGGACTTGCGGCCCAGCCAGATaGATACATCAGACCAGCAGTCCAGGATGTACACGCATCGTGTGT +
Preference number: 5 (lower is better)
Translates to: VLLHALGVGTCGPAR*IHQTSSPGCTRIVC
Trigger: ACACACGATGCGTGTACATCCTGGACTGCTGGTCTGATGTATTCATCTGGCTGGGCCGCAAGTCCCCACGCCTAGTGCGTGCAGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp AGTCCTGTGTGTAGAAGTGGCCAAACTCCTCCTCTGGCAGTCGAGTaGACTTGCGGCCCTCCAGCACGAAGCCCTCCATGCCATCCAGGT +
Preference number: 5 (lower is better)
Translates to: SPVCRSGQTPPLAVE*TCGPPARSPPCHPG
Trigger: ACCTGGATGGCATGGAGGGCTTCGTGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGGAGGAGTTTGGCCACTTCTACACACAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TGCACGACAGGTCCACATCTGAAAGGTTGCTCAGGCCCTCCAGGCTaGTGGGGAGGTTGCTCTGGGTGCGTTGAGTGTTCCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: CTTGPHLKGCSGPPG*WGGCSGCVECSSDA
Trigger: TGCATCTGAGGAACACTCAACGCACCCAGAGCAACCTCCCCACCAGCCTGGAGGGCCTGAGCAACCTTTCAGATGTGGACCTGTCGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp CTGACCACTGTATGTCGTGGCCGGTGTAGCATCCCACATAGCTCCTaGCCAAGTTTGAGTGCTGCTGCACGCACTAGGCGTGGGGACTTG +
Preference number: 5 (lower is better)
Translates to: LTTVCRGRCSIPHSS*PSLSAAARTRRGDL
Trigger: CAAGTCCCCACGCCTAGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGCTATGTGGGATGCTACACCGGCCACGACATACAGTGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp GAAGGCGCGCTGCTCATTACCTTTGCGGACCAGGCGCAGGCGACGTaGCCGCTCATGTTCTTTAGAGCGTGTGTGCTGGATGTATACCTG +
Preference number: 5 (lower is better)
Translates to: EGALLITFADQAQAT*PLMFFRACVLDVYL
Trigger: CAGGTATACATCCAGCACACACGCTCTAAAGAACATGAGCGGCCACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAGCGTGGTCAGATGGTaGTGGCTCACAGACAGGTGC +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPSVVRW*WLTDRC
Trigger: GCACCTGTCTGTGAGCCACAACCATCTGACCACGCT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTTCCACATCTGAAAGGTaGCTCAGGCCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSTSER*LRPSRL
Trigger: CAGCCTGGAGGGCCTGAGCAACCTTTCAGATGTGGA...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGCGGAACAGGCTTTCTaGTCAAGTGTGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSAEQAF*SSVASP
Trigger: TGGGGAGGCCACACTTGACAAGAAAGCCTGTTCCGC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGACTAGGCGTGGGGACTaGCGGCCCAGCCAGATGAAT +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRTRRGD*RPSQMN
Trigger: ATTCATCTGGCTGGGCCGCAAGTCCCCACGCCTAGT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTAGCTCCTGGCCAAGTTaGAGTGCTGCTGCACGCACT +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSSSWPS*SAAART
Trigger: AGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGCT...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTGAATTCTTCAGGCTGTaGGCCCGAGCTACAATGGCC +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSEFFRL*ARATMA
Trigger: GGCCATTGTAGCTCGGGCCAACAGCCTGAAGAATTC...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCGTTGTGGCTGAGGTaGAGCACCAGCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSPLWLR*STSMFL
Trigger: CAAGAACATGCTGGTGCTCAACCTCAGCCACAACGG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTTGATGAACAGCTGGTaGGGGATGGAGTCGATGCCG +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPLMNSW*GMESMP
Trigger: CGGCATCGACTCCATCCCCAACCAGCTGTTCATCAA...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTAGCAAGTCCGTAAGGTaGATGAACAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPSKSVR*MNSWLG
Trigger: CCCCAACCAGCTGTTCATCAACCTTACGGACTTGCT...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTTGCTCTGGGTGCGTaGAGTGTTCCTCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVALGA*SVPQMQ
Trigger: CTGCATCTGAGGAACACTCAACGCACCCAGAGCAAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCCTTTAGCACTTGCTaGGCCTGGACATCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSPFSTC*AWTSCA
Trigger: AGCACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGAGGCCTTCCCCTCCTaGTCTTCTGTCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPEAFPS*SSVFSS
Trigger: GGAAGAGAAGACAGAAGACAAGGAGGGGAAGGCCTC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp CATAGTGTTCAGGATGTCCTCTGCCAGCTTGGCTTCGTCGGGGTCTaGTGCCCGACCTACCCAGGCATACACAATGCCTTGGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: HSVQDVLCQLGFVGV*CPTYPGIHNALVVL
Trigger: GAGGACAACCAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATCAGACCCCGACGAAGCCAAGCTGGCAGAGGACATCCTGAACACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp ACGCTTCACCTTCCCAGAGAGGCCCTGGCCCTGAAGCACAGCCTCTaGATTCCGTGTGTAGTCCACTGTCAACACATCGTCCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TLHLPREALALKHSL*IPCVVHCQHIVPVL
Trigger: AAGAACTGGGACGATGTGTTGACAGTGGACTACACACGGAATGCAGAGGCTGTGCTTCAGGGCCAGGGCCTCTCTGGGAAGGTGAAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TTCTCCTGGGCAACATCTGACATGCCCTTTAGCACTTGCTTGGCCTaGACATCCTGTGCTGAGTCCTTGCGCCTCCGTAGCCGCATCTTG +
Preference number: 5 (lower is better)
Translates to: FSWATSDMPFSTCLA*TSCAESLRLRSRIL
Trigger: CAAGATGCGGCTACGGAGGCGCAAGGACTCAGCACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp GAAGACATAGCAGTCCTGTGTGTAGAAGTGGCCAAACTCCTCCTCTaGCAGTCGAGTGAACTTGCGGCCCTCCAGCACGAAGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: EDIAVLCVEVAKLLL*QSSELAALQHEALH
Trigger: ATGGAGGGCTTCGTGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGGAGGAGTTTGGCCACTTCTACACACAGGACTGCTATGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTACCCTTGTCAAGTCATaGCACGACAGGTCCACATCT +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPTLVKS*HDRSTS
Trigger: AGATGTGGACCTGTCGTGCAATGACTTGACAAGGGT...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGAGCTCTGCAATCTGGTaGCTACTGAGGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRSSAIW*LLRLRR
Trigger: CCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCATCAAAGTCCAGCTaGTTGGAGTTGAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPPSKSS*LELRYS
Trigger: GCTGTACCTCAACTCCAACAAGCTGGACTTTGATGG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTCTAGTGAGGACCCTTaGAGGGGCACAGGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRSSEDP*RGTGSN
Trigger: ATTGGAGCCTGTGCCCCTCAAAGGGTCCTCACTAGA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGTCCCAGTTCTTGAACTaGGCCTTGAACACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRSQFLN*ALNTWA
Trigger: GGCCCAGGTGTTCAAGGCCAAGTTCAAGAACTGGGA...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCAGTTTGATCTCCACTaGGCTTGTCTGGGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSQFDLH*ACLGPN
Trigger: GTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp TCGAACAGTACGGCACTCAGCACCCAGGTAGTTGCGCAGATTGACTaGATGAATGGCGGAACAGGCTTTCTTGTCAAGTGTGGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SNSTALSTQVVAQID*MNGGTGFLVKCGLP
Trigger: GGGGAGGCCACACTTGACAAGAAAGCCTGTTCCGCCATTCATGCAGTCAATCTGCGCAACTACCTGGGTGCTGAGTGCCGTACTGTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp ACCAGGCGCAGGCGACGTGGCCGCTCATGTTCTTTAGAGCGTGTGTaGTGGATGTATACCTGGCAAGCCTTCAGACTCAGTTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: TRRRRRGRSCSLERV*WMYTWQAFRLSLIS
Trigger: GGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCACACACGCTCTAAAGAACATGAGCGGCCACGTCGCCTGCGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TCACTGAGGTCCAGGTACAGCAAGTCCGTAAGGTTGATGAACAGCTaGTTGGGGATGGAGTCGATGCCGTTGTGGCTGAGGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: SLRSRYSKSVRLMNS*LGMESMPLWLRLST
Trigger: GGTGCTCAACCTCAGCCACAACGGCATCGACTCCATCCCCAACCAGCTGTTCATCAACCTTACGGACTTGCTGTACCTGGACCTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp CTGGGGTTTTCTCGAACATCCAGGACCTGGATCTCTGTCAGGAAGTaGATGGCCTCAGGAAGGGTCACCAGGCGGTTCTTATTCAGGACG +
Preference number: 5 (lower is better)
Translates to: LGFSRTSRTWISVRK*MASGRVTRRFLFRT
Trigger: CGTCCTGAATAAGAACCGCCTGGTGACCCTTCCTGAGGCCATCCACTTCCTGACAGAGATCCAGGTCCTGGATGTTCGAGAAAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TGTTTTTCTCCTGGGCAACATCTGACATGCCCTTTAGCACTTGCTTaGCCTGGACATCCTGTGCTGAGTCCTTGCGCCTCCGTAGCCGCA +
Preference number: 5 (lower is better)
Translates to: CFSPGQHLTCPLALA*PGHPVLSPCASVAA
Trigger: TGCGGCTACGGAGGCGCAAGGACTCAGCACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCCAGGAGAAAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp TCGTCGGGGTCTGATGCCCGACCTACCCAGGCATACACAATGCCTTaGTTGTCCTCGCTTTCAAAGGGGACCTTGAGGATGAAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SSGSDARPTQAYTMP*LSSLSKGTLRMKQN
Trigger: GTTCTGCTTCATCCTCAAGGTCCCCTTTGAAAGCGAGGACAACCAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATCAGACCCCGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTTACAGCTTCTTCAGCTaGGTGAGCTTGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPYSFFS*VSLQMA
Trigger: AGCCATCTGCAAGCTCACCAAGCTGAAGAAGCTGTA...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTTCAAAGTCCAGCTTGTaGGAGTTGAGGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPSKSSL*ELRYSF
Trigger: GAAGCTGTACCTCAACTCCAACAAGCTGGACTTTGA...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTACATCGTCCCAGTTCTaGAACTTGGCCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPTSSQF*NLALNT
Trigger: GGTGTTCAAGGCCAAGTTCAAGAACTGGGACGATGT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp GGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCTTTCAAAGGGGACCTaGAGGATGAAGCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: GLCAACRLWLAEAGTRSPLSKGT*RMKQNS
Trigger: TGAGTTCTGCTTCATCCTCAAGGTCCCCTTTGAAAG...AGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp CCTCTCGAACAGTACGGCACTCAGCACCCAGGTAGTTGCGCAGATTaGCTGCATGAATGGCGGAACAGGCTTTCTTGTCAAGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PLEQYGTQHPGSCAD*LHEWRNRLSCQVWP
Trigger: AGGCCACACTTGACAAGAAAGCCTGTTCCGCCATTCATGCAGTCAATCTGCGCAACTACCTGGGTGCTGAGTGCCGTACTGTTCGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp GCACATCCCAGAACCCTGGGGGCTCTTGGCCCTGCACCAGGAGTGTaGTTTCCGCCTTCCCTTTCCGCTCATTCTTGTTTATTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: AHPRTLGALGPAPGV*FPPSLSAHSCLFSL
Trigger: CAGAGAAAATAAACAAGAATGAGCGGAAAGGGAAGGCGGAAATCACACTCCTGGTGCAGGGCCAAGAGCCCCCAGGGTTCTGGGATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTAGTTCTAGGTTGTTGTaGGCAGCCATGAATTCCTCC +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPSSRLL*AAMNSS
Trigger: GGAGGAATTCATGGCTGCCAACAACAACCTAGAACT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCGAGTTTCTTCAGTTTaGGGCACCTGCAGAGACTTT +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSRVSSV*GTCRDF
Trigger: AAAGTCTCTGCAGGTGCCCAAAACTGAAGAAACTCG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGACCTTGGGCCGTTTTTaGTGTTCCACTGAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRTLGRF*CSTESL
Trigger: CAAGCTCTCAGTGGAACACAAAAAACGGCCCAAGGT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTCTTCCTCACTGGAGTCTGAGGAAATGGGATAGGAACTaGGGGTTCTCCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WLAEAGTRSPPLPHWSLRKWDRN*GFSCCC
Trigger: ACAGCAGCAGGAGAACCCCAAGTTCCTATCCCATTT...CCTCAGACTCCAGTGAGGAAGAGGAGGACTCCTCGTACCTGCTTCAGCTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGGCATACACAATGCCTaGGTTGTCCTCGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPGIHNA*VVLAFK
Trigger: TTTGAAAGCGAGGACAACCAAGGCATTGTGTATGCC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTGTCTGCCAGGTCATCTaGGCAAAAGTCAGAGCATTT +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPVCQVI*AKVRAF
Trigger: AAATGCTCTGACTTTTGCCAAGATGACCTGGCAGAC...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp CCTCGTGTGCTTCATGTACTCCGCATCGTCATCATAGGGTTTCTGTaGACCAATGCCTACCCAGAAGAAGTTCTCTGGCTCCTCGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRVLHVLRIVIIGFL*TNAYPEEVLWLLAF
Trigger: GAAGGCGAGGAGCCAGAGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAACCCTATGATGACGATGCGGAGTACATGAAGCACACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp GGTTTTCTCGAACATCCAGGACCTGGATCTCTGTCAGGAAGTGGATaGCCTCAGGAAGGGTCACCAGGCGGTTCTTATTCAGGACGAGTT +
Preference number: 5 (lower is better)
Translates to: GFLEHPGPGSLSGSG*PQEGSPGGSYSGRV
Trigger: AACTCGTCCTGAATAAGAACCGCCTGGTGACCCTTCCTGAGGCCATCCACTTCCTGACAGAGATCCAGGTCCTGGATGTTCGAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTATCAGTTCTAGGTTGTaGTTGGCAGCCATGAATTCC +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPISSRL*LAAMNS
Trigger: GGAATTCATGGCTGCCAACAACAACCTAGAACTGAT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp TTGGGGCTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCACAAAGTTCTCAATTaGCCAGATGGTCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: LGLCAACRLWLAEAGTRSHKVLN*PDGQTR
Trigger: CCTGGTTTGACCATCTGGCAAATTGAGAACTTTGTG...ACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTATAAATGTCCAGCCCTaGGTCCAGGAGAAACACAAA +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPINVQP*VQEKHK
Trigger: TTTGTGTTTCTCCTGGACCAAGGGCTGGACATTTAT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp TTTTTGTTTTTCTCCTGGGCAACATCTGACATGCCCTTTAGCACTTaGTTGGCCTGGACATCCTGTGCTGAGTCCTTGCGCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: FLFFSWATSDMPFST*LAWTSCAESLRLRS
Trigger: GCTACGGAGGCGCAAGGACTCAGCACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCCAGGAGAAAAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp AGCGTGTGTGCTGGATGTATACCTGGCAAGCCTTCAGACTCAGTTTaGTCTCCACTTGGCTTGTCTGGGTCCCAACCCACATGTAGACTT +
Preference number: 5 (lower is better)
Translates to: SVCAGCIPGKPSDSV*SPLGLSGSQPTCRL
Trigger: AAGTCTACATGTGGGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCACACACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp GTCTGCCAGGTCATCTTGGCAAAAGTCAGAGCATTTCTCAGTCACTaGGAAGTAACCCTTCTCATTGGAGCACCTGAAGAGCCTCGTGTG +
Preference number: 5 (lower is better)
Translates to: VCQVILAKVRAFLSH*EVTLLIGAPEEPRV
Trigger: CACACGAGGCTCTTCAGGTGCTCCAATGAGAAGGGTTACTTCGCAGTGACTGAGAAATGCTCTGACTTTTGCCAAGATGACCTGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 90 bp GGGTCCCAACCCACATGTAGACTTCTTGGCCATTGTCTAGCAGCATaGTGTCATCGTCTGCCAGGTCATCTTGGCAAAAGTCAGAGCATT +
Preference number: 5 (lower is better)
Translates to: GSQPTCRLLGHCLAA*CHRLPGHLGKSQSI
Trigger: AATGCTCTGACTTTTGCCAAGATGACCTGGCAGACGATGACATCATGCTGCTAGACAATGGCCAAGAAGTCTACATGTGGGTTGGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 90 bp GTTCTCTGGCTCCTCGCCTTCATTGATGACCTGTTTGCTGTAGGATaGATCAAACATAGTGTTCAGGATGTCCTCTGCCAGCTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: VLWLLAFIDDLFAVG*IKHSVQDVLCQLGF
Trigger: GAAGCCAAGCTGGCAGAGGACATCCTGAACACTATGTTTGATGCATCCTACAGCAAACAGGTCATCAATGAAGGCGAGGAGCCAGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS-3UTR CAA 90 bp CTGTGTGCTGCTTGCAGGCTGTGGCTAGCTGAAGCAGGTACGAGGAGTCCTCCTATCTATGCTTTCCTCTaGGTTTTTGTTTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LCAACRLWLAEAGTRSPPIYAFL*VFVFLL
Trigger: CAGGAGAAAAACAAAAACCAAGAGGAAAGCATAGAT...AGGAGGACTCCTCGTACCTGCTTCAGCTAGCCACAGCCTGCAAGCAGCACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 90 bp ATCATAGGGTTTCTGTGCACCAATGCCTACCCAGAAGAAGTTCTCTaGCTCCTCGCCTTCATTGATGACCTGTTTGCTGTAGGATGCATC +
Preference number: 5 (lower is better)
Translates to: IIGFLCTNAYPEEVL*LLAFIDDLFAVGCI
Trigger: GATGCATCCTACAGCAAACAGGTCATCAATGAAGGCGAGGAGCCAGAGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAACCCTATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GAGTCCTTGCGCCTCCGTAGCCGCATCTTGCGAGCCAAGGGGTCCTaGGACCCGCTCCCTACAGCTGCAGCAGCAGCCACTGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: ESLRLRSRILRAKGS*DPLPTAAAAATVAG
Trigger: CCCGGCCACAGTGGCTGCTGCTGCAGCTGTAGGGAGCGGGTCCAAGGACCCCTTGGCTCGCAAGATGCGGCTACGGAGGCGCAAGGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp GTGCTCCAGGCGTGGAAGCAGCGGGTGAAGGCGCGCTaGTCATTACCTTTGCGGACCAGGCGCAGGCGACGT +
Preference number: 6 (lower is better)
Translates to: VLQAWKQRVKAR*SLPLRTRRRRR
Trigger: ACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACGCCTGGAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp CTTGGCGGAACGTGCTCCAGGCGTGGAAGCAGCGGGTaGAGGCGCGCTGCTCATTACCTTTGCGGACCAGGC +
Preference number: 6 (lower is better)
Translates to: LGGTCSRRGSSG*RRAAHYLCGPG
Trigger: GCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACGCCTGGAGCACGTTCCGCCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TGGAAGCAGCGGGTGAAGGCGCGCTGCTCATTACCTTaGCGGACCAGGCGCAGGCGACGTGGCCGCTCATGT +
Preference number: 6 (lower is better)
Translates to: WKQRVKARCSLP*RTRRRRRGRSC
Trigger: ACATGAGCGGCCACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GAGGCGCCCGCCAGCCTCAGCTGGTTCTGTAGCGAGAAGTCAATGTaGTACCACTCGGCGGTGCGGTCAGCAGGCTTGGGCGGCATGACC +
Preference number: 6 (lower is better)
Translates to: EAPASLSWFCSEKSM*YHSAVRSAGLGGMT
Trigger: GGTCATGCCGCCCAAGCCTGCTGACCGCACCGCCGAGTGGTACAACATTGACTTCTCGCTACAGAACCAGCTGAGGCTGGCGGGCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GCCTGGACATCCTGTGCTGAGTCCTTGCGCCTCCGTAGCCGCATCTaGCGAGCCAAGGGGTCCTTGGACCCGCTCCCTACAGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: AWTSCAESLRLRSRI*RAKGSLDPLPTAAA
Trigger: TGCTGCAGCTGTAGGGAGCGGGTCCAAGGACCCCTTGGCTCGCAAGATGCGGCTACGGAGGCGCAAGGACTCAGCACAGGATGTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp GCCACTGTGGCCGGGGAGGCGCCCGCCAGCCTCAGCTaGTTCTGTAGCGAGAAGTCAATGTTGTACCACTCG +
Preference number: 6 (lower is better)
Translates to: ATVAGEAPASLS*FCSEKSMLYHS
Trigger: CGAGTGGTACAACATTGACTTCTCGCTACAGAACCAGCTGAGGCTGGCGGGCGCCTCCCCGGCCACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp TGGTCGATGCACAGGGACAGCTCTGCAATCTGGTTGCTACTGAGGTaGAGGCGGCGCAGGCTGGGGAGGGTGTACAGGCACTCCGGCACC +
Preference number: 6 (lower is better)
Translates to: WSMHRDSSAIWLLLR*RRRRLGRVYRHSGT
Trigger: GGTGCCGGAGTGCCTGTACACCCTCCCCAGCCTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp CTCCAGGCGTGGAAGCAGCGGGTGAAGGCGCGCTGCTCATTACCTTaGCGGACCAGGCGCAGGCGACGTGGCCGCTCATGTTCTTTAGAG +
Preference number: 6 (lower is better)
Translates to: LQAWKQRVKARCSLP*RTRRRRRGRSCSLE
Trigger: CTCTAAAGAACATGAGCGGCCACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAGCGCGCCTTCACCCGCTGCTTCCACGCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp AGGTGCACCCACTGGTCGATGCACAGGGACAGCTCTGCAATCTGGTaGCTACTGAGGTTGAGGCGGCGCAGGCTGGGGAGGGTGTACAGG +
Preference number: 6 (lower is better)
Translates to: RCTHWSMHRDSSAIW*LLRLRRRRLGRVYR
Trigger: CCTGTACACCCTCCCCAGCCTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGTGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GTATGTCGTGGCCGGTGTAGCATCCCACATAGCTCCTGGCCAAGTTaGAGTGCTGCTGCACGCACTAGGCGTGGGGACTTGCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: VCRGRCSIPHSSWPS*SAAARTRRGDLRPS
Trigger: GCTGGGCCGCAAGTCCCCACGCCTAGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGCTATGTGGGATGCTACACCGGCCACGACATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp ACCACTCGGCGGTGCGGTCAGCAGGCTTGGGCGGCATaGCCAAGCTGGGGTTTTCTCGAACATCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: TTRRCGQQAWAA*PSWGFLEHPGP
Trigger: AGGTCCTGGATGTTCGAGAAAACCCCAGCTTGGTCATGCCGCCCAAGCCTGCTGACCGCACCGCCGAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp ACCCACTGGTCGATGCACAGGGACAGCTCTGCAATCTaGTTGCTACTGAGGTTGAGGCGGCGCAGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: THWSMHRDSSAI*LLLRLRRRRLG
Trigger: CCCCAGCCTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CAGGTGCACCCACTGGTCGATGCACAGGGACAGCTCTaGAATCTGGTTGCTACTGAGGTTGAGGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: QVHPLVDAQGQL*NLVATEVEAAQ
Trigger: CTGCGCCGCCTCAACCTCAGTAGCAACCAGATTGCAGAGCTGTCCCTGTGCATCGACCAGTGGGTGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp TCTGGATGCACCGGGTGCAGAGGGCACTGCCGTTGGTaGGGATCTGATAGAGGGTCGGCTGAAGAGTACCCT +
Preference number: 6 (lower is better)
Translates to: SGCTGCRGHCRW*GSDRGSAEEYP
Trigger: AGGGTACTCTTCAGCCGACCCTCTATCAGATCCGCACCAACGGCAGTGCCCTCTGCACCCGGTGCATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp GCCAGCCTCAGCTGGTTCTGTAGCGAGAAGTCAATGTaGTACCACTCGGCGGTGCGGTCAGCAGGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: ASLSWFCSEKSM*YHSAVRSAGLG
Trigger: GCCCAAGCCTGCTGACCGCACCGCCGAGTGGTACAACATTGACTTCTCGCTACAGAACCAGCTGAGGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp GGCCGGTGTAGCATCCCACATAGCTCCTGGCCAAGTTaGAGTGCTGCTGCACGCACTAGGCGTGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: GRCSIPHSSWPS*SAAARTRRGDL
Trigger: CAAGTCCCCACGCCTAGTGCGTGCAGCAGCACTCAAACTTGGCCAGGAGCTATGTGGGATGCTACACCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp AAGTGGCCAAACTCCTCCTCTGGCAGTCGAGTGAACTaGCGGCCCTCCAGCACGAAGCCCTCCATGCCATCC +
Preference number: 6 (lower is better)
Translates to: KWPNSSSGSRVN*RPSSTKPSMPS
Trigger: GGATGGCATGGAGGGCTTCGTGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGGAGGAGTTTGGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GGCACCCTTGTCAAGTCATTGCACGACAGGTCCACATCTGAAAGGTaGCTCAGGCCCTCCAGGCTGGTGGGGAGGTTGCTCTGGGTGCGT +
Preference number: 6 (lower is better)
Translates to: GTLVKSLHDRSTSER*LRPSRLVGRLLWVR
Trigger: ACGCACCCAGAGCAACCTCCCCACCAGCCTGGAGGGCCTGAGCAACCTTTCAGATGTGGACCTGTCGTGCAATGACTTGACAAGGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp AGGCTGGGGAGGGTGTACAGGCACTCCGGCACCCTTGTCAAGTCATaGCACGACAGGTCCACATCTGAAAGGTTGCTCAGGCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RLGRVYRHSGTLVKS*HDRSTSERLLRPSR
Trigger: CCTGGAGGGCCTGAGCAACCTTTCAGATGTGGACCTGTCGTGCAATGACTTGACAAGGGTGCCGGAGTGCCTGTACACCCTCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp ATGGCCCGAAGCGAAGGCAGGCTAGACAGTTCGCCGTaGAGCGTGGTCAGATGGTTGTGGCTCACAGACAGG +
Preference number: 6 (lower is better)
Translates to: MARSEGRLDSSP*SVVRWLWLTDR
Trigger: CCTGTCTGTGAGCCACAACCATCTGACCACGCTTCACGGCGAACTGTCTAGCCTGCCTTCGCTTCGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp CACGCACTAGGCGTGGGGACTTGCGGCCCAGCCAGATaGATACATCAGACCAGCAGTCCAGGATGTACACGC +
Preference number: 6 (lower is better)
Translates to: HALGVGTCGPAR*IHQTSSPGCTR
Trigger: GCGTGTACATCCTGGACTGCTGGTCTGATGTATTCATCTGGCTGGGCCGCAAGTCCCCACGCCTAGTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp TGTAGAAGTGGCCAAACTCCTCCTCTGGCAGTCGAGTaGACTTGCGGCCCTCCAGCACGAAGCCCTCCATGC +
Preference number: 6 (lower is better)
Translates to: CRSGQTPPLAVE*TCGPPARSPPC
Trigger: GCATGGAGGGCTTCGTGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGGAGGAGTTTGGCCACTTCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp CAGGATGTCCTCTGCCAGCTTGGCTTCGTCGGGGTCTaGTGCCCGACCTACCCAGGCATACACAATGCCTTG +
Preference number: 6 (lower is better)
Translates to: QDVLCQLGFVGV*CPTYPGIHNAL
Trigger: CAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATCAGACCCCGACGAAGCCAAGCTGGCAGAGGACATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp GTGAGCTTGCAGATGGCTGAAGGCAGGGAGGTGAGCTaGTTCCGGGACAGATTCAAGGTCTCCAGGTGCACC +
Preference number: 6 (lower is better)
Translates to: VSLQMAEGREVS*FRDRFKVSRCT
Trigger: GGTGCACCTGGAGACCTTGAATCTGTCCCGGAACCAGCTCACCTCCCTGCCTTCAGCCATCTGCAAGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CTCCAGGCCCTGGTCCCAGCGTCGTACCTTTCCCCCTaGTGCCCGGGCATCTATGCTTTCCTCTTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: LQALVPASYLSP*CPGIYAFLLVF
Trigger: AAAAACCAAGAGGAAAGCATAGATGCCCGGGCACCAGGGGGAAAGGTACGACGCTGGGACCAGGGCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp AGCGAGAAGTCAATGTTGTACCACTCGGCGGTGCGGTCAGCAGGCTaGGGCGGCATGACCAAGCTGGGGTTTTCTCGAACATCCAGGACC +
Preference number: 6 (lower is better)
Translates to: SEKSMLYHSAVRSAG*GGMTKLGFSRTSRT
Trigger: GGTCCTGGATGTTCGAGAAAACCCCAGCTTGGTCATGCCGCCCAAGCCTGCTGACCGCACCGCCGAGTGGTACAACATTGACTTCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CAGGCCCTGGTCCCAGCGTCGTACCTTTCCCCCTGGTaGCCGGGCATCTATGCTTTCCTCTTGGTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: QALVPASYLSPW*PGIYAFLLVFV
Trigger: AACAAAAACCAAGAGGAAAGCATAGATGCCCGGGCACCAGGGGGAAAGGTACGACGCTGGGACCAGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp AGATGTCATCAGGGACTCCGGAATTCTTCAGGCTGTTaGCCCGAGCTACAATGGCCCGAAGCGAAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RCHQGLRNSSGC*PELQWPEAKAG
Trigger: GCCTGCCTTCGCTTCGGGCCATTGTAGCTCGGGCCAACAGCCTGAAGAATTCCGGAGTCCCTGATGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CCTGGGCAACATCTGACATGCCCTTTAGCACTTGCTTaGCCTGGACATCCTGTGCTGAGTCCTTGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PGQHLTCPLALA*PGHPVLSPCAS
Trigger: GGAGGCGCAAGGACTCAGCACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CACATCCTCCGTAAAGAACTCCGAGTAGTCAAGGCGTaGCTTCTCCAGGCCCTGGTCCCAGCGTCGTACCTT +
Preference number: 6 (lower is better)
Translates to: HILRKELRVVKA*LLQALVPASYL
Trigger: AAGGTACGACGCTGGGACCAGGGCCTGGAGAAGCCACGCCTTGACTACTCGGAGTTCTTTACGGAGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp GCAGTCCTGTGTGTAGAAGTGGCCAAACTCCTCCTCTaGCAGTCGAGTGAACTTGCGGCCCTCCAGCACGAA +
Preference number: 6 (lower is better)
Translates to: AVLCVEVAKLLL*QSSELAALQHE
Trigger: TTCGTGCTGGAGGGCCGCAAGTTCACTCGACTGCCAGAGGAGGAGTTTGGCCACTTCTACACACAGGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CTGCTCATTACCTTTGCGGACCAGGCGCAGGCGACGTaGCCGCTCATGTTCTTTAGAGCGTGTGTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: LLITFADQAQAT*PLMFFRACVLD
Trigger: ATCCAGCACACACGCTCTAAAGAACATGAGCGGCCACGTCGCCTGCGCCTGGTCCGCAAAGGTAATGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp GCAGGCTGGGGAGGGTGTACAGGCACTCCGGCACCCTaGTCAAGTCATTGCACGACAGGTCCACATCTGAAA +
Preference number: 6 (lower is better)
Translates to: AGWGGCTGTPAP*SSHCTTGPHLK
Trigger: TTTCAGATGTGGACCTGTCGTGCAATGACTTGACAAGGGTGCCGGAGTGCCTGTACACCCTCCCCAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TCAATGTTGTACCACTCGGCGGTGCGGTCAGCAGGCTaGGGCGGCATGACCAAGCTGGGGTTTTCTCGAACA +
Preference number: 6 (lower is better)
Translates to: SMLYHSAVRSAG*GGMTKLGFSRT
Trigger: TGTTCGAGAAAACCCCAGCTTGGTCATGCCGCCCAAGCCTGCTGACCGCACCGCCGAGTGGTACAACATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp CTGAGGTCCAGGTACAGCAAGTCCGTAAGGTTGATGAACAGCTGGTaGGGGATGGAGTCGATGCCGTTGTGGCTGAGGTTGAGCACCAGC +
Preference number: 6 (lower is better)
Translates to: LRSRYSKSVRLMNSW*GMESMPLWLRLSTS
Trigger: GCTGGTGCTCAACCTCAGCCACAACGGCATCGACTCCATCCCCAACCAGCTGTTCATCAACCTTACGGACTTGCTGTACCTGGACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CCAAGTAGCCCAGACCCAGGCCCACCTTGTATAGCTTaGGCTGGGGTGGCCAAAAGTCATCAGGCACATGAT +
Preference number: 6 (lower is better)
Translates to: PSSPDPGPPCIA*AGVAKSHQAHD
Trigger: ATCATGTGCCTGATGACTTTTGGCCACCCCAGCCCAAGCTATACAAGGTGGGCCTGGGTCTGGGCTACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp AAGATGTCATCAGGGACTCCGGAATTCTTCAGGCTGTaGGCCCGAGCTACAATGGCCCGAAGCGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KMSSGTPEFFRL*ARATMARSEGR
Trigger: CCTGCCTTCGCTTCGGGCCATTGTAGCTCGGGCCAACAGCCTGAAGAATTCCGGAGTCCCTGATGACATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TTGTTGGCAGCCATGAATTCCTCCAGGCTGGTGAGCTaGCCGATGCCAGAAGGCAGCCCATCAAAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LLAAMNSSRLVS*PMPEGSPSKSS
Trigger: GCTGGACTTTGATGGGCTGCCTTCTGGCATCGGCAAGCTCACCAGCCTGGAGGAATTCATGGCTGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp AGAACCCTGGGGGCTCTTGGCCCTGCACCAGGAGTGTaGTTTCCGCCTTCCCTTTCCGCTCATTCTTGTTTA +
Preference number: 6 (lower is better)
Translates to: RTLGALGPAPGV*FPPSLSAHSCL
Trigger: TAAACAAGAATGAGCGGAAAGGGAAGGCGGAAATCACACTCCTGGTGCAGGGCCAAGAGCCCCCAGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TCCAGGTACAGCAAGTCCGTAAGGTTGATGAACAGCTaGTTGGGGATGGAGTCGATGCCGTTGTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SRYSKSVRLMNS*LGMESMPLWLR
Trigger: CCTCAGCCACAACGGCATCGACTCCATCCCCAACCAGCTGTTCATCAACCTTACGGACTTGCTGTACCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TCTCGAACATCCAGGACCTGGATCTCTGTCAGGAAGTaGATGGCCTCAGGAAGGGTCACCAGGCGGTTCTTA +
Preference number: 6 (lower is better)
Translates to: SRTSRTWISVRK*MASGRVTRRFL
Trigger: TAAGAACCGCCTGGTGACCCTTCCTGAGGCCATCCACTTCCTGACAGAGATCCAGGTCCTGGATGTTCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp ATGCCGTTGTGGCTGAGGTTGAGCACCAGCATGTTCTaGGCATTCTCCAGCTCCCGTGGGCATTCTGTCAAC +
Preference number: 6 (lower is better)
Translates to: MPLWLRLSTSMF*AFSSSRGHSVN
Trigger: GTTGACAGAATGCCCACGGGAGCTGGAGAATGCCAAGAACATGCTGGTGCTCAACCTCAGCCACAACGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp AGGGTGTACAGGCACTCCGGCACCCTTGTCAAGTCATaGCACGACAGGTCCACATCTGAAAGGTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: RVYRHSGTLVKS*HDRSTSERLLR
Trigger: CCTGAGCAACCTTTCAGATGTGGACCTGTCGTGCAATGACTTGACAAGGGTGCCGGAGTGCCTGTACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp ATGGAGTCGATGCCGTTGTGGCTGAGGTTGAGCACCAGCATGTTCTaGGCATTCTCCAGCTCCCGTGGGCATTCTGTCAACTGGTTATGG +
Preference number: 6 (lower is better)
Translates to: MESMPLWLRLSTSMF*AFSSSRGHSVNWLW
Trigger: CCATAACCAGTTGACAGAATGCCCACGGGAGCTGGAGAATGCCAAGAACATGCTGGTGCTCAACCTCAGCCACAACGGCATCGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp CTGGTGAGCTTGCCGATGCCAGAAGGCAGCCCATCAAAGTCCAGCTaGTTGGAGTTGAGGTACAGCTTCTTCAGCTTGGTGAGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LVSLPMPEGSPSKSS*LELRYSFFSLVSLQ
Trigger: CTGCAAGCTCACCAAGCTGAAGAAGCTGTACCTCAACTCCAACAAGCTGGACTTTGATGGGCTGCCTTCTGGCATCGGCAAGCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp TCTAGGTTGTTGTTGGCAGCCATGAATTCCTCCAGGCTGGTGAGCTaGCCGATGCCAGAAGGCAGCCCATCAAAGTCCAGCTTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SRLLLAAMNSSRLVS*PMPEGSPSKSSLLE
Trigger: CTCCAACAAGCTGGACTTTGATGGGCTGCCTTCTGGCATCGGCAAGCTCACCAGCCTGGAGGAATTCATGGCTGCCAACAACAACCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp TCGGGGTCTGATGCCCGACCTACCCAGGCATACACAATGCCTTGGTaGTCCTCGCTTTCAAAGGGGACCTTGAGGATGAAGCAGAACTCA +
Preference number: 6 (lower is better)
Translates to: SGSDARPTQAYTMPW*SSLSKGTLRMKQNS
Trigger: TGAGTTCTGCTTCATCCTCAAGGTCCCCTTTGAAAGCGAGGACAACCAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATCAGACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp GCTGGGGTGGCCAAAAGTCATCAGGCACATGATTCTTaGTCTCAGAAGGCTCTCCACCCAGCACATCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGVAKSHQAHDS*SQKALHPAHPR
Trigger: TCTGGGATGTGCTGGGTGGAGAGCCTTCTGAGATCAAGAATCATGTGCCTGATGACTTTTGGCCACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp AGGCGACGTGGCCGCTCATGTTCTTTAGAGCGTGTGTaGTGGATGTATACCTGGCAAGCCTTCAGACTCAGT +
Preference number: 6 (lower is better)
Translates to: RRRGRSCSLERV*WMYTWQAFRLS
Trigger: ACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCACACACGCTCTAAAGAACATGAGCGGCCACGTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp ATGACCAAGCTGGGGTTTTCTCGAACATCCAGGACCTaGATCTCTGTCAGGAAGTGGATGGCCTCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: MTKLGFSRTSRT*ISVRKWMASGR
Trigger: CCTTCCTGAGGCCATCCACTTCCTGACAGAGATCCAGGTCCTGGATGTTCGAGAAAACCCCAGCTTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TCTGATGCCCGACCTACCCAGGCATACACAATGCCTTaGTTGTCCTCGCTTTCAAAGGGGACCTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: SDARPTQAYTMP*LSSLSKGTLRM
Trigger: CATCCTCAAGGTCCCCTTTGAAAGCGAGGACAACCAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp AGGTACAGCAAGTCCGTAAGGTTGATGAACAGCTGGTaGGGGATGGAGTCGATGCCGTTGTGGCTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: RYSKSVRLMNSW*GMESMPLWLRL
Trigger: CAACCTCAGCCACAACGGCATCGACTCCATCCCCAACCAGCTGTTCATCAACCTTACGGACTTGCTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp CCGATGCCAGAAGGCAGCCCATCAAAGTCCAGCTTGTaGGAGTTGAGGTACAGCTTCTTCAGCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: PMPEGSPSKSSL*ELRYSFFSLVS
Trigger: GCTCACCAAGCTGAAGAAGCTGTACCTCAACTCCAACAAGCTGGACTTTGATGGGCTGCCTTCTGGCATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp GATGCCCGACCTACCCAGGCATACACAATGCCTTGGTaGTCCTCGCTTTCAAAGGGGACCTTGAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: DARPTQAYTMPW*SSLSKGTLRMK
Trigger: CTTCATCCTCAAGGTCCCCTTTGAAAGCGAGGACAACCAAGGCATTGTGTATGCCTGGGTAGGTCGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp GTGAGCTTGCCGATGCCAGAAGGCAGCCCATCAAAGTCCAGCTTGTaGGAGTTGAGGTACAGCTTCTTCAGCTTGGTGAGCTTGCAGATG +
Preference number: 6 (lower is better)
Translates to: VSLPMPEGSPSKSSL*ELRYSFFSLVSLQM
Trigger: CATCTGCAAGCTCACCAAGCTGAAGAAGCTGTACCTCAACTCCAACAAGCTGGACTTTGATGGGCTGCCTTCTGGCATCGGCAAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp CAGTACGGCACTCAGCACCCAGGTAGTTGCGCAGATTaGCTGCATGAATGGCGGAACAGGCTTTCTTGTCAA +
Preference number: 6 (lower is better)
Translates to: QYGTQHPGSCAD*LHEWRNRLSCQ
Trigger: TTGACAAGAAAGCCTGTTCCGCCATTCATGCAGTCAATCTGCGCAACTACCTGGGTGCTGAGTGCCGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp GCTGGATGTATACCTGGCAAGCCTTCAGACTCAGTTTaGTCTCCACTTGGCTTGTCTGGGTCCCAACCCACA +
Preference number: 6 (lower is better)
Translates to: AGCIPGKPSDSV*SPLGLSGSQPT
Trigger: TGTGGGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp ACGGCACTCAGCACCCAGGTAGTTGCGCAGATTGACTaGATGAATGGCGGAACAGGCTTTCTTGTCAAGTGT +
Preference number: 6 (lower is better)
Translates to: TALSTQVVAQID*MNGGTGFLVKC
Trigger: ACACTTGACAAGAAAGCCTGTTCCGCCATTCATGCAGTCAATCTGCGCAACTACCTGGGTGCTGAGTGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp ACTCCGCATCGTCATCATAGGGTTTCTGTGCACCAATaGCTACCCAGAAGAAGTTCTCTGGCTCCTCGCCTT +
Preference number: 6 (lower is better)
Translates to: TPHRHHRVSVHQ*LPRRSSLAPRL
Trigger: AAGGCGAGGAGCCAGAGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAACCCTATGATGACGATGCGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CTGCATGAATGGCGGAACAGGCTTTCTTGTCAAGTGTaGCCTCCCCACCAATCCAGTAGTAGATCTCCCAGT +
Preference number: 6 (lower is better)
Translates to: LHEWRNRLSCQV*PPHQSSSRSPS
Trigger: ACTGGGAGATCTACTACTGGATTGGTGGGGAGGCCACACTTGACAAGAAAGCCTGTTCCGCCATTCATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp CGACGTGGCCGCTCATGTTCTTTAGAGCGTGTGTGCTaGATGTATACCTGGCAAGCCTTCAGACTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: RRGRSCSLERVC*MYTWQAFRLSL
Trigger: CAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCACACACGCTCTAAAGAACATGAGCGGCCACGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TTGCCGATGCCAGAAGGCAGCCCATCAAAGTCCAGCTaGTTGGAGTTGAGGTACAGCTTCTTCAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LPMPEGSPSKSS*LELRYSFFSLV
Trigger: CACCAAGCTGAAGAAGCTGTACCTCAACTCCAACAAGCTGGACTTTGATGGGCTGCCTTCTGGCATCGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TGCTGGATGTATACCTGGCAAGCCTTCAGACTCAGTTaGATCTCCACTTGGCTTGTCTGGGTCCCAACCCAC +
Preference number: 6 (lower is better)
Translates to: CWMYTWQAFRLS*ISTWLVWVPTH
Trigger: GTGGGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp TCCTCGCTTTCAAAGGGGACCTTGAGGATGAAGCAGAACTCAGAGTaGAGAAGGCTGGAGTCAGTGTTAATCTGGATGCACCGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLSKGTLRMKQNSE*RRLESVLIWMHRVQ
Trigger: CTGCACCCGGTGCATCCAGATTAACACTGACTCCAGCCTTCTCAACTCTGAGTTCTGCTTCATCCTCAAGGTCCCCTTTGAAAGCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp TTCAGTTTTGGGCACCTGCAGAGACTTTCAGGAATCAGTTCTAGGTaGTTGTTGGCAGCCATGAATTCCTCCAGGCTGGTGAGCTTGCCG +
Preference number: 6 (lower is better)
Translates to: FSFGHLQRLSGISSR*LLAAMNSSRLVSLP
Trigger: CGGCAAGCTCACCAGCCTGGAGGAATTCATGGCTGCCAACAACAACCTAGAACTGATTCCTGAAAGTCTCTGCAGGTGCCCAAAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CTTTTGAAATGGGATAGGAACTTGGGGTTCTCCTGCTaGTGTGTCATACGTACTACCTCCAGCTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LLKWDRNLGFSC*CVIRTTSSLPG
Trigger: CCCTGGCAAGCTGGAGGTAGTACGTATGACACAGCAGCAGGAGAACCCCAAGTTCCTATCCCATTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TTGGCATTCTCCAGCTCCCGTGGGCATTCTGTCAACTaGTTATGGCTCAAGTCCAGAACAGAGAGATCATCC +
Preference number: 6 (lower is better)
Translates to: LAFSSSRGHSVN*LWLKSRTERSS
Trigger: GGATGATCTCTCTGTTCTGGACTTGAGCCATAACCAGTTGACAGAATGCCCACGGGAGCTGGAGAATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp CACCTGCAGAGACTTTCAGGAATCAGTTCTAGGTTGTaGTTGGCAGCCATGAATTCCTCCAGGCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: HLQRLSGISSRL*LAAMNSSRLVS
Trigger: GCTCACCAGCCTGGAGGAATTCATGGCTGCCAACAACAACCTAGAACTGATTCCTGAAAGTCTCTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp TACCTGGCAAGCCTTCAGACTCAGTTTGATCTCCACTaGGCTTGTCTGGGTCCCAACCCACATGTAGACTTC +
Preference number: 6 (lower is better)
Translates to: YLASLQTQFDLH*ACLGPNPHVDF
Trigger: GAAGTCTACATGTGGGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp CTGGATGTATACCTGGCAAGCCTTCAGACTCAGTTTGATCTCCACTaGGCTTGTCTGGGTCCCAACCCACATGTAGACTTCTTGGCCATT +
Preference number: 6 (lower is better)
Translates to: LDVYLASLQTQFDLH*ACLGPNPHVDFLAI
Trigger: AATGGCCAAGAAGTCTACATGTGGGTTGGGACCCAGACAAGCCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CTTCATGTACTCCGCATCGTCATCATAGGGTTTCTGTaGACCAATGCCTACCCAGAAGAAGTTCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LHVLRIVIIGFL*TNAYPEEVLWL
Trigger: GAGCCAGAGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAACCCTATGATGACGATGCGGAGTACATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS TCA 72 bp CCCACATGTAGACTTCTTGGCCATTGTCTAGCAGCATaGTGTCATCGTCTGCCAGGTCATCTTGGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: PTCRLLGHCLAA*CHRLPGHLGKS
Trigger: ACTTTTGCCAAGATGACCTGGCAGACGATGACATCATGCTGCTAGACAATGGCCAAGAAGTCTACATGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CTTGGTTTTTGTTTTTCTCCTGGGCAACATCTGACATaGCCTTTAGCACTTGCTTGGCCTGGACATCCTGTG +
Preference number: 6 (lower is better)
Translates to: LGFCFSPGQHLT*PLALAWPGHPV
Trigger: CACAGGATGTCCAGGCCAAGCAAGTGCTAAAGGGCATGTCAGATGTTGCCCAGGAGAAAAACAAAAACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS GCA 72 bp CTCCTCGCCTTCATTGATGACCTGTTTGCTGTAGGATaGATCAAACATAGTGTTCAGGATGTCCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LLAFIDDLFAVG*IKHSVQDVLCQ
Trigger: CTGGCAGAGGACATCCTGAACACTATGTTTGATGCATCCTACAGCAAACAGGTCATCAATGAAGGCGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TTTCTGTGCACCAATGCCTACCCAGAAGAAGTTCTCTaGCTCCTCGCCTTCATTGATGACCTGTTTGCTGTA +
Preference number: 6 (lower is better)
Translates to: FLCTNAYPEEVL*LLAFIDDLFAV
Trigger: TACAGCAAACAGGTCATCAATGAAGGCGAGGAGCCAGAGAACTTCTTCTGGGTAGGCATTGGTGCACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TCTAGCAGCATGATGTCATCGTCTGCCAGGTCATCTTaGCAAAAGTCAGAGCATTTCTCAGTCACTGCGAAG +
Preference number: 6 (lower is better)
Translates to: SSSMMSSSARSS*QKSEHFSVTAK
Trigger: CTTCGCAGTGACTGAGAAATGCTCTGACTTTTGCCAAGATGACCTGGCAGACGATGACATCATGCTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 90 bp CCTTGGTCCAGGAGAAACACAAACCTTGGATCTAGTGAGGACCCTTaGAGGGGCACAGGCTCCAATTTGATGTTCTTTTTCCCATATACA +
Preference number: 6 (lower is better)
Translates to: PWSRRNTNLGSSEDP*RGTGSNLMFFFPYT
Trigger: TGTATATGGGAAAAAGAACATCAAATTGGAGCCTGTGCCCCTCAAAGGGTCCTCACTAGATCCAAGGTTTGTGTTTCTCCTGGACCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CCA 72 bp TCATGTTCTTTAGAGCGTGTGTGCTGGATGTATACCTaGCAAGCCTTCAGACTCAGTTTGATCTCCACTTGG +
Preference number: 6 (lower is better)
Translates to: SCSLERVCWMYT*QAFRLSLISTW
Trigger: CCAAGTGGAGATCAAACTGAGTCTGAAGGCTTGCCAGGTATACATCCAGCACACACGCTCTAAAGAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5
CDS CAA 72 bp AGGAGAAACACAAACCTTGGATCTAGTGAGGACCCTTaGAGGGGCACAGGCTCCAATTTGATGTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: RRNTNLGSSEDP*RGTGSNLMFFF
Trigger: GAAAAAGAACATCAAATTGGAGCCTGTGCCCCTCAAAGGGTCCTCACTAGATCCAAGGTTTGTGTTTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002889.5