Pregenerated sensors for FLI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016087Ensembl transcript IDs: ENSMUST00000016231.14, ENSMUST00000183767.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGAGTTTGTGTTAAACTTTCTTTGTTCATATTCTGACTATTTCTaGGGAGAAGAGTCACCCAAACACATACTGCCCATTGTGAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: SEFVLNFLCSYSDYF*GEESPKHILPIVRN Trigger: ATTCCTCACAATGGGCAGTATGTGTTTGGGTGACTCTTCTCCCCAGAAATAGTCAGAATATGAACAAAGAAAGTTTAACACAAACTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR-3UTR TCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTCCAGTTGCCATCCACTaGATTGAGTCCTCCGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVPVAIH*IESSED Trigger: ATCTTCGGAGGACTCAATTCAGTGGATGGCAACTGG...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR-3UTR TCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTCTTTGTTCATATTCTaGCTATTTCTGGGGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVCESEFRNPHDFSKFWDSLFIF*LFLGRR Trigger: TCTTCTCCCCAGAAATAGTCAGAATATGAACAAAGA...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR-3UTR CCA 90 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGTATTCTGACTATTTCTaGGGAGAAGAGTCACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: IYCIYRAGECLVCTEKSLYSDYF*GEESPK Trigger: TTTGGGTGACTCTTCTCCCCAGAAATAGTCAGAATA...CAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR CAA 90 bp | TGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTaGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTATTTACAAACA | + |
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Preference number: 2 (lower is better) Translates to: CIYRAGECLVCTEKS*FVLFRLLQLCYLQT Trigger: TGTTTGTAAATAACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR CAA 90 bp | TGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATaGCAACTCTGTTATTTACAAACATTTCTAAAGCGTTGTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: CLVCTEKSLFVLFRL*QLCYLQTFLKRCRS Trigger: AGACCTACAACGCTTTAGAAATGTTTGTAAATAACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR CAA 90 bp | TATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGTTaGTCCTTTTCAGGTTATTGCAACTCTGTTATTTACAAACATTTC | + |
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Preference number: 2 (lower is better) Translates to: YIEQESASCAQRKVC*SFSGYCNSVIYKHF Trigger: GAAATGTTTGTAAATAACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR TCA 72 bp | ACTGGCCTCAGAGCCAGTGTTCCAGTTGCCATCCACTaGATTGAGTCCTCCGAAGATAAGATTATAAACATC | + |
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Preference number: 3 (lower is better) Translates to: TGLRASVPVAIH*IESSEDKIINI Trigger: GATGTTTATAATCTTATCTTCGGAGGACTCAATTCAGTGGATGGCAACTGGAACACTGGCTCTGAGGCCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR-3UTR CAA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTTTGCCATCCACTGAATaGAGTCCTCCGAAGATAAGA | + |
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Preference number: 3 (lower is better) Translates to: VPRVHREKFVCPFQVIATLPSTE*SPPKIR Trigger: TCTTATCTTCGGAGGACTCAATTCAGTGGATGGCAA...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTCACTGTCATTAAAAGAGCCAGTGTTCCAGTaGCCATCCACTGAATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: EFRNPHDFSKFWDSLSLKEPVFQ*PSTELS Trigger: ACTCAATTCAGTGGATGGCAACTGGAACACTGGCTC...TTTTAATGACAGTGAGTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR GCA 72 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTaGACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: IYCIYRAGECLV*TEKSLFVLFRL Trigger: TAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTGGTCCCCTCCCAGGTaGTACAGCTGGCGTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SVCESEFRNPHDFSKFWDWSPPR*YSWRWR Trigger: GCGCCAACGCCAGCTGTATCACCTGGGAGGGGACCA...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCATCTGTTGGATGTGGCTaGAGGGCCTGGGCAATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LESRVSSKVRAGTSARRPSVGCG*RAWAMP Trigger: TGGCATTGCCCAGGCCCTGCAGCCACATCCAACAGA...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TCATTCGATGATAGGAGGTTGAGAATCCAAACTGGTGGACTGGCTCATGGAATGTCTGCCTTGGGGAGATaGGCTGCCGCTCCGTATGCT | + |
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Preference number: 4 (lower is better) Translates to: SFDDRRLRIQTGGLAHGMSALGR*AAAPYA Trigger: AGCATACGGAGCGGCAGCCCATCTCCCCAAGGCAGA...CATTCCATGAGCCAGTCCACCAGTTTGGATTCTCAACCTCCTATCATCGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCATGTTGTAGGCGGAGGTaGCTCGGAGGAAGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LESRVSSKVRAGTSARRPCCRRR*LGGSPP Trigger: AGGAGGACTTCCTCCGAGCCACCTCCGCCTACAACA...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCAACGTGGGTGTTAGGATaGCGGGGGACACTGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LESRVSSKVRAGTSARRPTWVLG*RGTLGF Trigger: AAACCCCAGTGTCCCCCGCCATCCTAACACCCACGT...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | TCATTCGATGATAGGAGGTTGAGAATCCAAACTGGTGGACTGGCTCATGGAATGGGCATGGAGGATGGGTaGGACGGGACAAAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: SFDDRRLRIQTGGLAHGMGMEDG*DGTKFT Trigger: GGTGAACTTTGTCCCGTCTCACCCATCCTCCATGCC...CATTCCATGAGCCAGTCCACCAGTTTGGATTCTCAACCTCCTATCATCGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTCTCACTGGCTGGTTaGTCCACTCCTGCTGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATLSLAG*STPAAV Trigger: CACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAG...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCAGCTTGTTACATTTGCTaGCACTGCAGTCCACCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LESRVSSKVRAGTSARRPACYIC*HCSPPE Trigger: CTCCGGTGGACTGCAGTGTCAGCAAATGTAACAAGC...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | TCATTCGATGATAGGAGGTTGAGAATCCAAACTGGTGGACTGGCTCATGGAATGCTTGCCCATGGTCTGTaGTCCTCCAAGGAGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: SFDDRRLRIQTGGLAHGMLAHGL*SSKERT Trigger: AGTCCTCTCCTTGGAGGATCACAGACCATGGGCAAG...CATTCCATGAGCCAGTCCACCAGTTTGGATTCTCAACCTCCTATCATCGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCAGCTGCTCAGTGTTCTTaGCCATGGTCTGTGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: LESRVSSKVRAGTSARRPAAQCS*PWSVIL Trigger: GAGGATCACAGACCATGGGCAAGAACACTGAGCAGC...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTCTCTCCGTTCGTTGGTaGTCATGTTGGGAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ALTFTKSQTRPTLVKSMILSVRW*SCWEEG Trigger: CCCCTCCTCCCAACATGACCACCAACGAACGGAGAG...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCAGTCATATCTGCCTTaGGGAGATGGGCTGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATQSYLP*GDGLPL Trigger: GAGCGGCAGCCCATCTCCCCAAGGCAGATATGACTG...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCCACTCCTGCTGCGGTaGCAGGGGGTTGATTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATPLLLR*QGVDFV Trigger: CACAAAATCAACCCCCTGCCACCGCAGCAGGAGTGG...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTTGCTAGGCGGCTGCTaGTTGGCCCCAGGATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SVCESEFRNPHDFSKFWDLLGGC*LAPGSD Trigger: ATCAGATCCTGGGGCCAACCAGCAGCCGCCTAGCAA...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTAGAAACTGCCACAGCTaGATCTGCCCACTCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATRNCHS*ICPLPG Trigger: CCCTGGGAGTGGGCAGATCCAGCTGTGGCAGTTTCT...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTTGATCCACTCCTGCTaGGGTGGCAGGGGGTTGATT | + |
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Preference number: 4 (lower is better) Translates to: SVCESEFRNPHDFSKFWDLIHSC*GGRGLI Trigger: AATCAACCCCCTGCCACCGCAGCAGGAGTGGATCAA...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTTTGACTCTCACTGGCTaGTTGATCCACTCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALTFTKSQTRPTLVKSMILTLTG*LIHSCC Trigger: GCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAA...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTTGTCTCTGTTGGATGTaGCTGCAGGGCCTGGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATCLCWM*LQGLGN Trigger: ATTGCCCAGGCCCTGCAGCCACATCCAACAGAGACA...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | TCATTCGATGATAGGAGGTTGAGAATCCAAACTGGTGGACTGGCTCATGGAATGGTTATAGGCCAGCAGTaGACTTTCCCTGAGGTAACT | + |
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Preference number: 4 (lower is better) Translates to: SFDDRRLRIQTGGLAHGMVIGQQ*TFPEVT Trigger: AGTTACCTCAGGGAAAGTTCACTGCTGGCCTATAAC...CATTCCATGAGCCAGTCCACCAGTTTGGATTCTCAACCTCCTATCATCGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTCCACAGTGTGGGGTCTaGAGGCACAATGACTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVPQCGV*RHNDSP Trigger: CGGAGAGTCATTGTGCCTGCAGACCCCACACTGTGG...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCCACCGGAGACTCCCTaGATCCATTCATGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATPPETP*IHSCGH Trigger: ATGACCACATGAATGGATCCAGGGAGTCTCCGGTGG...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTTTCAGTCGTGAGGACTaGTCTGTATGGGAGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ALTFTKSQTRPTLVKSMIFSRED*SVWEVV Trigger: CACAACCTCCCATACAGACCAGTCCTCACGACTGAA...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTTGCCGCTCCGTATGCTaGATCAAAAAGGGACTGATC | + |
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Preference number: 4 (lower is better) Translates to: VPRVHREKFVCPFQVIATCRSVC*IKKGLI Trigger: GATCAGTCCCTTTTTGATTCAGCATACGGAGCGGCA...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACGACATTGACTCTCACTaGCTGGTTGATCCACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SVCESEFRNPHDFSKFWDDIDSH*LVDPLL Trigger: CAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTC...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTTATAGTTCATGGGGTTaGCTTCGCCTCCGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVYSSWG*LRLRPP Trigger: TGGTGGGCGGAGGCGAAGCCAACCCCATGAACTATA...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGTCCATGCTCCTCTCCTaGCAGAGTCATAAGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IYCIYRAGECLVCTEKSLSMLLS*QSHKKG Trigger: ACCCTTCTTATGACTCTGTCAGGAGAGGAGCATGGA...CAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | GAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTCACTGTCATTAAAACGAAGCAGTCATATCTaGCTTGGGGAGATGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EFRNPHDFSKFWDSLSLKRSSHI*LGEMGC Trigger: GCAGCCCATCTCCCCAAGGCAGATATGACTGCTTCG...TTTTAATGACAGTGAGTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTGATAGATCCCAGCAGTaGGGGAGGTCCAGTATTGTG | + |
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Preference number: 4 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVDRSQQ*GRSSIV Trigger: CACAATACTGGACCTCCCCCACTGCTGGGATCTATC...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTGGAGGTCCAGTATTGTaGTGCTGCTCCAAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVGGPVL*CCSKEA Trigger: AGCTTCTTTGGAGCAGCATCACAATACTGGACCTCC...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTAGGGATACTTGTACATaGATGTCTCTGTTGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: ALTFTKSQTRPTLVKSMIRDTCT*MSLLDV Trigger: CACATCCAACAGAGACATCCATGTACAAGTATCCCT...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR CAA 72 bp | AGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTaGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTAT | + |
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Preference number: 4 (lower is better) Translates to: RAGECLVCTEKS*FVLFRLLQLCY Trigger: ATAACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR GCA 90 bp | AGCGTTTGCGAATCTGAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACCATATTATTGTTCCATaGTCCTCTCCTGACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SVCESEFRNPHDFSKFWDHIIVP*SSPDRV Trigger: GACTCTGTCAGGAGAGGAGCATGGAACAATAATATG...GTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTCAGATTCGCAAACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CCA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTCTGGATCCATTCATGTaGTCATACTCCCGCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVLDPFM*SYSRLT Trigger: TGTCAAGCGGGAGTATGACCACATGAATGGATCCAG...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| 3UTR CAA 72 bp | CAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGTTaGTCCTTTTCAGGTTATTGCAACTCTGTTATTTAC | + |
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Preference number: 4 (lower is better) Translates to: QESASCAQRKVC*SFSGYCNSVIY Trigger: GTAAATAACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCACTCTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR TCA 90 bp | GAGTTTAGAAATCCCCATGACTTTTCAAAGTTCTGGGACTCACTGTCATTAAAAAAGAAGGGTCTTCCTTaGCATTCAGTCGTGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: EFRNPHDFSKFWDSLSLKKKGLP*HSVVRT Trigger: AGTCCTCACGACTGAATGTCAAGGAAGACCCTTCTT...TTTTAATGACAGTGAGTCCCAGAACTTTGAAAAGTCATGGGGATTTCTAAACTC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS TCA 90 bp | TCATGGGGTTGGCTTCGCCTCCGCCCACCAGCTTGTTACATTTGCTaGCACTGCAGTCCACCGGAGACTCCCTGGATCCATTCATGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SWGWLRLRPPACYIC*HCSPPETPWIHSCG Trigger: ACCACATGAATGGATCCAGGGAGTCTCCGGTGGACTGCAGTGTCAGCAAATGTAACAAGCTGGTGGGCGGAGGCGAAGCCAACCCCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS TCA 90 bp | TTGGGGAGATGGGCTGCCGCTCCGTATGCTGAATCAAAAAGGGACTaGTCGTCACTCACCACAGACAGAGCCTCCTTAATAGTCCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: LGRWAAAPYAESKRD*SSLTTDRASLIVPS Trigger: GGACGGGACTATTAAGGAGGCTCTGTCTGTGGTGAGTGACGATCAGTCCCTTTTTGATTCAGCATACGGAGCGGCAGCCCATCTCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS TCA 90 bp | AGCAGTCATATCTGCCTTGGGGAGATGGGCTGCCGCTCCGTATGCTaGATCAAAAAGGGACTGATCGTCACTCACCACAGACAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSHICLGEMGCRSVC*IKKGLIVTHHRQSL Trigger: GAGGCTCTGTCTGTGGTGAGTGACGATCAGTCCCTTTTTGATTCAGCATACGGAGCGGCAGCCCATCTCCCCAAGGCAGATATGACTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CCA 90 bp | CCATTCATGTGGTCATACTCCCGCTTGACATTGACTCTCACTGGCTaGTTGATCCACTCCTGCTGCGGTGGCAGGGGGTTGATTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PFMWSYSRLTLTLTG*LIHSCCGGRGLILW Trigger: CCACAAAATCAACCCCCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CCA 90 bp | GGATCCATTCATGTGGTCATACTCCCGCTTGACATTGACTCTCACTaGCTGGTTGATCCACTCCTGCTGCGGTGGCAGGGGGTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSIHVVILPLDIDSH*LVDPLLLRWQGVDF Trigger: AAAATCAACCCCCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTAGGCGGCTGCTGGTaGGCCCCAGGATCTGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPRVHREKFVCPFQVIATLGGCW*APGSDK Trigger: CTTATCAGATCCTGGGGCCAACCAGCAGCCGCCTAG...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TCATTCGATGATAGGAGGTTGAGAATCCAAACTGGTGGACTGGCTCATGGAATGATGACTCTCCGTTCGTaGGTGGTCATGTTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SFDDRRLRIQTGGLAHGMMTLRS*VVMLGG Trigger: TCCTCCCAACATGACCACCAACGAACGGAGAGTCAT...CATTCCATGAGCCAGTCCACCAGTTTGGATTCTCAACCTCCTATCATCGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTGCAGTCATATCTGCCTaGGGGAGATGGGCTGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVAVISA*GRWAAA Trigger: AGCGGCAGCCCATCTCCCCAAGGCAGATATGACTGC...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTTACTCCCGCTTGACATaGACTCTCACTGGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALTFTKSQTRPTLVKSMIYSRLT*TLTGWL Trigger: CAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTA...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TATTTCTGGGGAGAAGAGTCACCCAAACACATACTGCCCATTGTGAGGAATTTTCGCTGCTCAGTGTTCTaGCCCATGGTCTGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFWGEESPKHILPIVRNFRCSVF*PMVCDP Trigger: AGGATCACAGACCATGGGCAAGAACACTGAGCAGCG...AAAATTCCTCACAATGGGCAGTATGTGTTTGGGTGACTCTTCTCCCCAGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGCCTCCGCCCACCAGCTaGTTACATTTGCTGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: IYCIYRAGECLVCTEKSLPPPTS*LHLLTL Trigger: CAGTGTCAGCAAATGTAACAAGCTGGTGGGCGGAGG...CAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TATTTCTGGGGAGAAGAGTCACCCAAACACATACTGCCCATTGTGAGGAATTTTACCAGCTTGTTACATTaGCTGACACTGCAGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YFWGEESPKHILPIVRNFTSLLH*LTLQST Trigger: GGTGGACTGCAGTGTCAGCAAATGTAACAAGCTGGT...AAAATTCCTCACAATGGGCAGTATGTGTTTGGGTGACTCTTCTCCCCAGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGGGTCTGTATGGGAGGTaGTGTTATAGGCCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IYCIYRAGECLVCTEKSLGLYGR*CYRPAV Trigger: CACTGCTGGCCTATAACACAACCTCCCATACAGACC...CAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TTAGAGTCCAGAGTATCCAGTAAAGTGAGAGCTGGAACTTCAGCCAGAAGGCCAAGGAGAGGACTTTTGTaGAGGCCAGAGTTCATATTA | + |
|
Preference number: 5 (lower is better) Translates to: LESRVSSKVRAGTSARRPRRGLL*RPEFIL Trigger: TAATATGAACTCTGGCCTCAACAAAAGTCCTCTCCT...TGGCCTTCTGGCTGAAGTTCCAGCTCTCACTTTACTGGATACTCTGGACTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | GCCTTGACTTTTACTAAGTCTCAAACCAGACCAACCCTGGTCAAGTCCATGATTCCAAGGAGAGGACTTTaGTTGAGGCCAGAGTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: ALTFTKSQTRPTLVKSMIPRRGL*LRPEFI Trigger: TATGAACTCTGGCCTCAACAAAAGTCCTCTCCTTGG...AATCATGGACTTGACCAGGGTTGGTCTGGTTTGAGACTTAGTAAAAGTCAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTTGGTCATACTCCCGCTaGACATTGACTCTCACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVWSYSR*TLTLTG Trigger: GCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCA...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | GTGCCTCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTAAAGTTCACCTTCTGTaGATGGGCATGGTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPRVHREKFVCPFQVIATKVHLL*MGMVGR Trigger: CCTTCCTACCATGCCCATCAACAGAAGGTGAACTTT...AGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS GCA 90 bp | AAGGAGAGGACTTTTGTTGAGGCCAGAGTTCATATTATTGTTCCATaGTCCTCTCCTGACAGAGTCATAAGAAGGGTCTTCCTTGACATT | + |
|
Preference number: 5 (lower is better) Translates to: KERTFVEARVHIIVP*SSPDRVIRRVFLDI Trigger: AATGTCAAGGAAGACCCTTCTTATGACTCTGTCAGGAGAGGAGCATGGAACAATAATATGAACTCTGGCCTCAACAAAAGTCCTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | ATATATTGCATATATAGAGCAGGAGAGTGCCTCGTGTGCACAGAGAAAAGTTTGCGGAGGAAGTCCTCCTaGTTCATTTTACACAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: IYCIYRAGECLVCTEKSLRRKSS*FILHNS Trigger: GGAATTGTGTAAAATGAACAAGGAGGACTTCCTCCG...CAAACTTTTCTCTGTGCACACGAGGCACTCTCCTGCTCTATATATGCAATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS-3UTR CAA 90 bp | TCGTGTGCACAGAGAAAAGTTTGTTTGTCCTTTTCAGGTTATTGCAACTCTGTTCCAGAGTTCATATTATaGTTCCATGCTCCTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCAQRKVCLSFSGYCNSVPEFIL*FHAPLL Trigger: CAGGAGAGGAGCATGGAACAATAATATGAACTCTGG...AACAGAGTTGCAATAACCTGAAAAGGACAAACAAACTTTTCTCTGTGCACACGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CAA 72 bp | GGGTTGGCTTCGCCTCCGCCCACCAGCTTGTTACATTaGCTGACACTGCAGTCCACCGGAGACTCCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLASPPPTSLLH*LTLQSTGDSLD Trigger: ATCCAGGGAGTCTCCGGTGGACTGCAGTGTCAGCAAATGTAACAAGCTGGTGGGCGGAGGCGAAGCCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS TCA 72 bp | TGGCTTCGCCTCCGCCCACCAGCTTGTTACATTTGCTaGCACTGCAGTCCACCGGAGACTCCCTGGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WLRLRPPACYIC*HCSPPETPWIH Trigger: ATGGATCCAGGGAGTCTCCGGTGGACTGCAGTGTCAGCAAATGTAACAAGCTGGTGGGCGGAGGCGAAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CCA 72 bp | TGGTCATACTCCCGCTTGACATTGACTCTCACTGGCTaGTTGATCCACTCCTGCTGCGGTGGCAGGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSYSRLTLTLTG*LIHSCCGGRGL Trigger: CAACCCCCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CCA 72 bp | CATGTGGTCATACTCCCGCTTGACATTGACTCTCACTaGCTGGTTGATCCACTCCTGCTGCGGTGGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HVVILPLDIDSH*LVDPLLLRWQG Trigger: CCCCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 90 bp | GGAGACTCCCTGGATCCATTCATGTGGTCATACTCCCGCTTGACATaGACTCTCACTGGCTGGTTGATCCACTCCTGCTGCGGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GDSLDPFMWSYSRLT*TLTGWLIHSCCGGR Trigger: CCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGGAGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CCA 72 bp | CGTAGTCAGGACTCCCCGAAGCAGTCATATCTGCCTTaGGGAGATGGGCTGCCGCTCCGTATGCTGAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSQDSPKQSYLP*GDGLPLRMLNQ Trigger: TTGATTCAGCATACGGAGCGGCAGCCCATCTCCCCAAGGCAGATATGACTGCTTCGGGGAGTCCTGACTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CAA 90 bp | TCCACCGGAGACTCCCTGGATCCATTCATGTGGTCATACTCCCGCTaGACATTGACTCTCACTGGCTGGTTGATCCACTCCTGCTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: STGDSLDPFMWSYSR*TLTLTGWLIHSCCG Trigger: ACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGGAGTCTCCGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS TCA 72 bp | TGGATAGATCCCAGCAGTGGGGGAGGTCCAGTATTGTaGTGCTGCTCCAAAGAAGCTGGAGGAGGTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: WIDPSSGGGPVL*CCSKEAGGGDR Trigger: CCTGTCACCTCCTCCAGCTTCTTTGGAGCAGCATCACAATACTGGACCTCCCCCACTGCTGGGATCTATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS GCA 72 bp | GATAAGGATCTGGCTGGGGCCGCTGCTCAGTGTTCTTaGCCATGGTCTGTGATCCTCCAAGGAGAGGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: DKDLAGAAAQCS*PWSVILQGEDF Trigger: AAAGTCCTCTCCTTGGAGGATCACAGACCATGGGCAAGAACACTGAGCAGCGGCCCCAGCCAGATCCTTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CCA 72 bp | CTGCAGTCCACCGGAGACTCCCTGGATCCATTCATGTaGTCATACTCCCGCTTGACATTGACTCTCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQSTGDSLDPFM*SYSRLTLTLTG Trigger: GCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGGAGTCTCCGGTGGACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 72 bp | TCATACTCCCGCTTGACATTGACTCTCACTGGCTGGTaGATCCACTCCTGCTGCGGTGGCAGGGGGTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SYSRLTLTLTGW*IHSCCGGRGLI Trigger: AATCAACCCCCTGCCACCGCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS TCA 72 bp | ATCTGCCTTGGGGAGATGGGCTGCCGCTCCGTATGCTaGATCAAAAAGGGACTGATCGTCACTCACCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ICLGEMGCRSVC*IKKGLIVTHHR Trigger: TCTGTGGTGAGTGACGATCAGTCCCTTTTTGATTCAGCATACGGAGCGGCAGCCCATCTCCCCAAGGCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CCA 72 bp | GGCCGTTCTTCTCATCCATGTAGCTATTATAGTTCATaGGGTTGGCTTCGCCTCCGCCCACCAGCTTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GRSSHPCSYYSS*GWLRLRPPACY Trigger: GTAACAAGCTGGTGGGCGGAGGCGAAGCCAACCCCATGAACTATAATAGCTACATGGATGAGAAGAACGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CCA 72 bp | GGTGCGACAACAGCACTTCTGTGTTGTAGGCGGAGGTaGCTCGGAGGAAGTCCTCCTTGTTCATTTTACACA | + |
|
Preference number: 6 (lower is better) Translates to: GATTALLCCRRR*LGGSPPCSFYT Trigger: TGTGTAAAATGAACAAGGAGGACTTCCTCCGAGCCACCTCCGCCTACAACACAGAAGTGCTGTTGTCGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 72 bp | CTGGATCCATTCATGTGGTCATACTCCCGCTTGACATaGACTCTCACTGGCTGGTTGATCCACTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LDPFMWSYSRLT*TLTGWLIHSCC Trigger: GCAGCAGGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 72 bp | GACTCCCTGGATCCATTCATGTGGTCATACTCCCGCTaGACATTGACTCTCACTGGCTGGTTGATCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSLDPFMWSYSR*TLTLTGWLIHS Trigger: GGAGTGGATCAACCAGCCAGTGAGAGTCAATGTCAAGCGGGAGTATGACCACATGAATGGATCCAGGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 90 bp | GACAGGCATGGAGGATGGGTGAGACGGGACAAAGTTCACCTTCTGTaGATGGGCATGGTAGGAAGGCATGTAGGAGATATCAGAGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: DRHGGWVRRDKVHLL*MGMVGRHVGDIRGI Trigger: TATCCCTCTGATATCTCCTACATGCCTTCCTACCATGCCCATCAACAGAAGGTGAACTTTGTCCCGTCTCACCCATCCTCCATGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS TCA 72 bp | TGGGCTGCCGCTCCGTATGCTGAATCAAAAAGGGACTaGTCGTCACTCACCACAGACAGAGCCTCCTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: WAAAPYAESKRD*SSLTTDRASLI Trigger: TATTAAGGAGGCTCTGTCTGTGGTGAGTGACGATCAGTCCCTTTTTGATTCAGCATACGGAGCGGCAGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CAA 72 bp | GGAGGATGGGTGAGACGGGACAAAGTTCACCTTCTGTaGATGGGCATGGTAGGAAGGCATGTAGGAGATATC | + |
|
Preference number: 6 (lower is better) Translates to: GGWVRRDKVHLL*MGMVGRHVGDI Trigger: GATATCTCCTACATGCCTTCCTACCATGCCCATCAACAGAAGGTGAACTTTGTCCCGTCTCACCCATCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS CCA 72 bp | TCTTCTCATCCATGTAGCTATTATAGTTCATGGGGTTaGCTTCGCCTCCGCCCACCAGCTTGTTACATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSHPCSYYSSWG*LRLRPPACYIC Trigger: GCAAATGTAACAAGCTGGTGGGCGGAGGCGAAGCCAACCCCATGAACTATAATAGCTACATGGATGAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS TCA 72 bp | AGAGTCATAAGAAGGGTCTTCCTTGACATTCAGTCGTaGGGACTGGTCTGTATGGGAGGTTGTGTTATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVIRRVFLDIQS*GLVCMGGCVIG Trigger: GCCTATAACACAACCTCCCATACAGACCAGTCCTCACGACTGAATGTCAAGGAAGACCCTTCTTATGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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| CDS CAA 72 bp | CCCATGGTCTGTGATCCTCCAAGGAGAGGACTTTTGTaGAGGCCAGAGTTCATATTATTGTTCCATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PMVCDPPRRGLL*RPEFILLFHAP Trigger: AGGAGCATGGAACAATAATATGAACTCTGGCCTCAACAAAAGTCCTCTCCTTGGAGGATCACAGACCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016231.14 |
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| CDS GCA 72 bp | ACTTTTGTTGAGGCCAGAGTTCATATTATTGTTCCATaGTCCTCTCCTGACAGAGTCATAAGAAGGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TFVEARVHIIVP*SSPDRVIRRVF Trigger: GAAGACCCTTCTTATGACTCTGTCAGGAGAGGAGCATGGAACAATAATATGAACTCTGGCCTCAACAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016231.14 ENSMUST00000183767.2 |
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