Pregenerated sensors for FLCN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032633Ensembl transcript IDs: ENSMUST00000047706.3, ENSMUST00000091246.11, ENSMUST00000102697.10
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AACAAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTaGAGAGGCCACGGCTGTGCACGTGACCTGAGAAGTCACCAACCG | + |
Preference number: 1 (lower is better) Translates to: NKTAMVLMYPQAGKM*RGHGCARDLRSHQP Trigger: CGGTTGGTGACTTCTCAGGTCACGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR CCA 90 bp | CACACCTACTCCAACAGGGCTGCACCTCCTAATAGTGCCACTCCCTaGGCAGAGCACATACAAACCACCACAGTATTTAACATAAAAACA | + |
Preference number: 1 (lower is better) Translates to: HTYSNRAAPPNSATP*AEHIQTTTVFNIKT Trigger: TGTTTTTATGTTAAATACTGTGGTGGTTTGTATGTGCTCTGCCCAGGGAGTGGCACTATTAGGAGGTGCAGCCCTGTTGGAGTAGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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3UTR-3UTR GCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGATGATCCACGATGCTTaGTGTCTTCCATGGTGGGAA | + |
Preference number: 2 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTMIHDA*CLPWWE Trigger: TTCCCACCATGGAAGACAGCAAGCATCGTGGATCAT...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR CCA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGTTTTTCCCACAGAGCTaGTCTGTACACCACCTTCCA | + |
Preference number: 2 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLFFPQS*SVHHLP Trigger: TGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAA...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR CCA 90 bp | TCTCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCCCCTACATTTCAACATaGGCTGATAGAGTCTTACAA | + |
Preference number: 2 (lower is better) Translates to: SQFPAFVLTGHRTHLARSPYIST*ADRVLQ Trigger: TTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGG...GGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR CCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAATGCTGTCTTCCATGGTaGGAAGGCGTTGTCCTAACC | + |
Preference number: 2 (lower is better) Translates to: VIVYSGWLALRQQQRRKQCCLPW*EGVVLT Trigger: GGTTAGGACAACGCCTTCCCACCATGGAAGACAGCA...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR TCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAAAAACAGCCATGGTTTTaGTGTATCCACAGGCCGGCA | + |
Preference number: 2 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKKQPWF*CIHRPA Trigger: TGCCGGCCTGTGGATACATCAAAACCATGGCTGTTT...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR TCA 90 bp | GCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCTGCTCAACTGTACAGAGACTaGGATACACAGTCTTCATGT | + |
Preference number: 2 (lower is better) Translates to: AGMEQEELRVLHLHLKAAQLYRD*DTQSSC Trigger: ACATGAAGACTGTGTATCTCAGTCTCTGTACAGTTG...AGCAGCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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3UTR-3UTR GCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAATGATCCACGATGCTTaGTGTCTTCCATGGTGGGAA | + |
Preference number: 2 (lower is better) Translates to: VIVYSGWLALRQQQRRKQMIHDA*CLPWWE Trigger: TTCCCACCATGGAAGACAGCAAGCATCGTGGATCAT...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR GCA 72 bp | GCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTaGAGAGGCCACGGCTGTGCACGTGACCTGAGAAGT | + |
Preference number: 3 (lower is better) Translates to: AMVLMYPQAGKM*RGHGCARDLRS Trigger: ACTTCTCAGGTCACGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR TCA 72 bp | ACAGAACACATCTCGCCAGGTCCTGACAGCGCAGTTTaGTGCAAAGGGACCACTGTCTCTGTGTCCCCTACA | + |
Preference number: 3 (lower is better) Translates to: TEHISPGPDSAV*CKGTTVSVSPT Trigger: TGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTGTCAGGACCTGGCGAGATGTGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR TCA 72 bp | GCAGCTAAGAGGAGGGTCTTAAAGCCACACCCACAGTaGCACACCTACTCCAACAGGGCTGCACCTCCTAAT | + |
Preference number: 3 (lower is better) Translates to: AAKRRVLKPHPQ*HTYSNRAAPPN Trigger: ATTAGGAGGTGCAGCCCTGTTGGAGTAGGTGTGTCACTGTGGGTGTGGCTTTAAGACCCTCCTCTTAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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3UTR-3UTR CAA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGAATGATCCACGATGCTaGCTGTCTTCCATGGTGGGA | + |
Preference number: 3 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRNDPRC*LSSMVG Trigger: TCCCACCATGGAAGACAGCAAGCATCGTGGATCATT...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR CAA 90 bp | CCAGGCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCAATGATCCACGATGCTaGCTGTCTTCCATGGTGGGA | + |
Preference number: 3 (lower is better) Translates to: PGRHGAGGAKSSPSSSEGNDPRC*LSSMVG Trigger: TCCCACCATGGAAGACAGCAAGCATCGTGGATCATT...GCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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3UTR TCA 72 bp | AGGACACGCTCCAACAACAAAACCTCAGAGGCAGACTaGTGGACTCCTCTCAGTTCCCAGCCTTTGTCCTCA | + |
Preference number: 3 (lower is better) Translates to: RTRSNNKTSEAD*WTPLSSQPLSS Trigger: TGAGGACAAAGGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTTTGTTGTTGGAGCGTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR TCA 72 bp | GCACGTGACCTGAGAAGTCACCAACCGAAAGACAAATaGTCCACGATGCTTGCTGTCTTCCATGGTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: ARDLRSHQPKDK*STMLAVFHGGK Trigger: CTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATTTGTCTTTCGGTTGGTGACTTCTCAGGTCACGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR CCA 72 bp | AAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTaGTCTGTACACCACCTTCCAGAAGGAGTTCTCGGA | + |
Preference number: 3 (lower is better) Translates to: KSETQGQFFPQS*SVHHLPEGVLG Trigger: TCCGAGAACTCCTTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR CCA 72 bp | GCGATCTGTCGTAACACCGTCATAGTCTACAGTGGCTaGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAA | + |
Preference number: 3 (lower is better) Translates to: AICRNTVIVYSG*LALRQQQRRKQ Trigger: TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGACGGTGTTACGACAGATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR TCA 72 bp | ATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTaGACCCTAGGCCATAAACAGGGCCTCACCCCAGAA | + |
Preference number: 3 (lower is better) Translates to: ISTWADRVLQGG*TLGHKQGLTPE Trigger: TTCTGGGGTGAGGCCCTGTTTATGGCCTAGGGTTCACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR-3UTR CAA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAAAAAACAGCCATGGTTTaGATGTATCCACAGGCCGGC | + |
Preference number: 3 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKKTAMV*MYPQAG Trigger: GCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR GCA 72 bp | TTCAGGAAATCTTTCCAAGCTACGTCCTTATTAAACTaGAATGGTGAGAGGCGATCTGTCGTAACACCGTCA | + |
Preference number: 3 (lower is better) Translates to: FRKSFQATSLLN*NGERRSVVTPS Trigger: TGACGGTGTTACGACAGATCGCCTCTCACCATTGCAGTTTAATAAGGACGTAGCTTGGAAAGATTTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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3UTR CCA 72 bp | ATGACCAAGGCAATTCTCATAAGGACAACATTTAATTaGGGCTGTCTTATAGTTTCAGTCCATTATCATCAA | + |
Preference number: 3 (lower is better) Translates to: MTKAILIRTTFN*GCLIVSVHYHQ Trigger: TTGATGATAATGGACTGAAACTATAAGACAGCCCCAATTAAATGTTGTCCTTATGAGAATTGCCTTGGTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGGGGCACGGACCCGGCTaGTCATCTGAATGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTGHGPG*SSECHP Trigger: AGGGTGGCATTCAGATGAGCAGCCGGGTCCGTGCCC...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGGAGAGCGGGCAGCGTTaGCGTTCCTCTGGTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLESGQR*RSSGAG Trigger: TCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTC...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCCACTTCCGGCCCCCTaGGGCAGGGGAGCGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRPLPAP*GRGACR Trigger: TCTACACGCTCCCCTGCCCCAGGGGGCCGGAAGTGG...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CCAGGCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCAGCGTGCGGGGGCCATaGAGCTCGCAGAAGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: PGRHGAGGAKSSPSSSEGSVRGP*SSQKWQ Trigger: CTGCCACTTCTGCGAGCTCCATGGCCCCCGCACGCT...GCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGCTCCGGACACAGGCCTaGCGGACGATGCTGAAGAGC | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWLRTQA*RTMLKS Trigger: GCTCTTCAGCATCGTCCGCCAGGCCTGTGTCCGGAG...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TCTCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCGCGTTGCCGTTCCTCTaGTGCAGGAAGGGCGTGAAG | + |
Preference number: 4 (lower is better) Translates to: SQFPAFVLTGHRTHLARSALPFL*CRKGVK Trigger: CTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGC...GGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGCCAGGGTGTCCTCTGTaGGAGCGCCCTCTAAGAGCT | + |
Preference number: 4 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLPGCPL*ERPLRA Trigger: AGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGG...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCAGCGTGCGGGGGCCATaGAGCTCGCAGAAGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPSVRGP*SSQKWQ Trigger: CTGCCACTTCTGCGAGCTCCATGGCCCCCGCACGCT...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACTGGGCCCCGGGCTGCTaGACTCACTGCTGGCACCCT | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHWAPGC*THCWHP Trigger: AGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCA...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | CTCCAACAACAAAACCTCAGAGGCAGACTGATGGACTCCTCTCAGTTCCCAGCCGTGCCCTACGGCAAGTaGCCGGCAGCCCTCACACAT | + |
Preference number: 4 (lower is better) Translates to: LQQQNLRGRLMDSSQFPAVPYGK*PAALTH Trigger: ATGTGTGAGGGCTGCCGGTCACTTGCCGTAGGGCAC...GGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTTTGTTGTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGGGCTGCTCATCTGAATaGCACCCTCCTCCTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWGCSSE*HPPPPQ Trigger: CTGAGGAGGAGGAGGGTGGCATTCAGATGAGCAGCC...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CCAGGCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCCCAGGGTGTCCTCTGTaGGAGCGCCCTCTAAGAGCT | + |
Preference number: 4 (lower is better) Translates to: PGRHGAGGAKSSPSSSEGPGCPL*ERPLRA Trigger: AGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGG...GCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACAGCAGGGTGGAGGTTTaGGCGAGTGGCCGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHSRVEV*ASGRVD Trigger: GTCCACACGGCCACTCGCTCAAACCTCCACCCTGCT...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAAAGCAGGGTGGAGGTTTaGGCGAGTGGCCGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPESRVEV*ASGRVD Trigger: GTCCACACGGCCACTCGCTCAAACCTCCACCCTGCT...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCCGTGTAGAACTTCCGTaGAGAAGAGCGTGCGGGGGC | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPRVELP*RRACGG Trigger: GCCCCCGCACGCTCTTCTGCACGGAAGTTCTACACG...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGTCCTCCTCCTCAGCCTaGTCAACCTGGTCAGGACTG | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRSSSSA*STWSGL Trigger: CAGTCCTGACCAGGTTGAGCAGGCTGAGGAGGAGGA...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCTGCTACGATGCTGAAGAGCTaGGGGTGGTTGGGGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: AGMEQEELRVLHLHLKAATMLKS*GWLGCW Trigger: CCAGCACCCCAACCACCCGCAGCTCTTCAGCATCGT...AGCAGCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CCAGGCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCTTGCCGTTCCTCTGGTaGAGGAAGGGCGTGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: PGRHGAGGAKSSPSSSEGLPFLW*RKGVKA Trigger: TGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAA...GCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TCTCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCCAGGCAAAGGAAGTGTaGAGACACGCCCACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: SQFPAFVLTGHRTHLARSQAKEV*RHAHKL Trigger: CAACTTGTGGGCGTGTCTGCACACTTCCTTTGCCTG...GGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGCAGGCAAAGGAAGTGTaGAGACACGCCCACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTQAKEV*RHAHKL Trigger: CAACTTGTGGGCGTGTCTGCACACTTCCTTTGCCTG...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CTCCAACAACAAAACCTCAGAGGCAGACTGATGGACTCCTCTCAGTTCCCAGCCGGGCCCAACTCTGTCTaGAGCCACAGGGCTACCACT | + |
Preference number: 4 (lower is better) Translates to: LQQQNLRGRLMDSSQFPAGPNSV*SHRATT Trigger: AGTGGTAGCCCTGTGGCTGCAGACAGAGTTGGGCCC...GGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTTTGTTGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCGGGCCCAACTCTGTCTaGAGCCACAGGGCTACCACT | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPGPNSV*SHRATT Trigger: AGTGGTAGCCCTGTGGCTGCAGACAGAGTTGGGCCC...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CTCCAACAACAAAACCTCAGAGGCAGACTGATGGACTCCTCTCAGTTCCCAGCCTGGAGCTCGCAGAAGTaGCAGAGGGCGACTATGGCG | + |
Preference number: 4 (lower is better) Translates to: LQQQNLRGRLMDSSQFPAWSSQK*QRATMA Trigger: CGCCATAGTCGCCCTCTGCCACTTCTGCGAGCTCCA...GGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTTTGTTGTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTTGGGCCCCGGGCTGCTaGACTCACTGCTGGCACCCT | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGWAPGC*THCWHP Trigger: AGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCA...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAACTCCGGACACAGGCCTaGCGGACGATGCTGAAGAGC | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPELRTQA*RTMLKS Trigger: GCTCTTCAGCATCGTCCGCCAGGCCTGTGTCCGGAG...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCCTCTGGGCACGCTGTaGACATCCAAACTGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRPLGTL*TSKLLC Trigger: GCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGG...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGGCAAGCTTCTCCATCTaGACCAGGGTGTCCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWASFSI*TRVSSV Trigger: CACAGAGGACACCCTGGTCCAGATGGAGAAGCTTGC...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGCCCTTCAGCACCCTCTaGTGTAACAGGAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTPFSTL*CNRSFL Trigger: GAGAAAGCTCCTGTTACACCAGAGGGTGCTGAAGGG...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGTCTGAGGCCAGAACATaGGCAGGGATAGGCACGGGA | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRSEART*AGIGTG Trigger: TCCCGTGCCTATCCCTGCCCATGTTCTGGCCTCAGA...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCGAGCGAGTGGCCGTGTaGACCTCCACGACAACTACG | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPERVAV*TSTTTT Trigger: CGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTC...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTGTGTCCTCCTTaGGGCGACTGTCTACCTTGG | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWSVCPP*GDCLPW Trigger: CCAAGGTAGACAGTCGCCCCAAGGAGGACACACAGA...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAGTGCCCTACGGCAAGTaGCCGGCAGCCCTCACACAT | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQVPYGK*PAALTH Trigger: ATGTGTGAGGGCTGCCGGTCACTTGCCGTAGGGCAC...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGACGTGTAGAACTTCCGTaGAGAAGAGCGTGCGGGGGC | + |
Preference number: 4 (lower is better) Translates to: RNPRAVFPTELVCTPPSRRVELP*RRACGG Trigger: GCCCCCGCACGCTCTTCTGCACGGAAGTTCTACACG...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGAGGGCACGGACCCGGCTaGTCATCTGAATGCCACCCT | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGGHGPG*SSECHP Trigger: AGGGTGGCATTCAGATGAGCAGCCGGGTCCGTGCCC...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCTTGCCGTTCCTCTGGTaGAGGAAGGGCGTGAAGGCA | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPLPFLW*RKGVKA Trigger: TGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAA...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAGAGAGCGGGCAGCGTTaGCGTTCCTCTGGTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQESGQR*RSSGAG Trigger: TCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTC...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAAGCGTTGCCGTTCCTCTaGTGCAGGAAGGGCGTGAAG | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPEALPFL*CRKGVK Trigger: CTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGC...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGGCAAGCTTCTCCATCTaGACCAGGGTGTCCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRASFSI*TRVSSV Trigger: CACAGAGGACACCCTGGTCCAGATGGAGAAGCTTGC...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAAGAAGCCGGTAAGCTTTaGGGGCTGCCAGCTCCCACA | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPEEAGKL*GLPAPT Trigger: TGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTC...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGAAGCCGGTAAGCTTTaGGGGCTGCCAGCTCCCACA | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHEAGKL*GLPAPT Trigger: TGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTC...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGAGCGAGTGGCCGTGTaGACCTCCACGACAACTACG | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHERVAV*TSTTTT Trigger: CGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTC...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGTCCACAGACAGGTTCTaGTTGGTCAGAGCTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTSTDRF*LVRAAS Trigger: TGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGA...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAACTGCCTCAAACACCTTaGAGGCCTTGGCCTGGAGCT | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPELPQTP*RPWPGA Trigger: AGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAG...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAGGTGCAGGAAGGGCGTaGAGGCAGTGTTCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: RNPRAVFPTELVCTPPSRGAGRA*RQCSSS Trigger: AGAGGATGAACACTGCCTTCACGCCCTTCCTGCACC...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGAGAACTTCAGCAGTTTaGCGTTGTCCTCCTCTGATG | + |
Preference number: 4 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLRTSAV*RCPPLM Trigger: CATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCT...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTTCGGACGGTGGACATaGGATGGGACTTGTAGGTTT | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWFGRWT*DGTCRF Trigger: AAACCTACAAGTCCCATCTCATGTCCACCGTCCGAA...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGCTCATCTGAATaGCACCCTCCTCCTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHGCSSE*HPPPPQ Trigger: CTGAGGAGGAGGAGGGTGGCATTCAGATGAGCAGCC...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGACGATGCTGAAGAGCTaGGGGTGGTTGGGGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: CKGTTVSVSPTFQHGLIETMLKS*GWLGCW Trigger: CCAGCACCCCAACCACCCGCAGCTCTTCAGCATCGT...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAGTAAGCTTTGGGGGCTaGCAGCTCCCACAGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQVSFGG*QLPQAE Trigger: CTCAGCCTGTGGGAGCTGGCAGCCCCCAAAGCTTAC...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGAGCTCGCAGAAGTaGCAGAGGGCGACTATGGCG | + |
Preference number: 4 (lower is better) Translates to: QRSLMQRDHCLCVPYISTWSSQK*QRATMA Trigger: CGCCATAGTCGCCCTCTGCCACTTCTGCGAGCTCCA...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGAATGCTGTACCAGCGCTaGAAGCCTCTGGCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGMLYQR*KPLARL Trigger: CAGCCTGGCCAGAGGCTTCCAGCGCTGGTACAGCAT...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAATCTGAGGCCAGAACATaGGCAGGGATAGGCACGGGA | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPESEART*AGIGTG Trigger: TCCCGTGCCTATCCCTGCCCATGTTCTGGCCTCAGA...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGCCACAGGGCTACCACTaGTCACCACAAACTCATACT | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWPQGYH*SPQTHT Trigger: AGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGG...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGCAGACAGGTTCTGGTTaGTCAGAGCTGCTTCAATCT | + |
Preference number: 4 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLQTGSG*SELLQS Trigger: AGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTG...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGCTGCCTCAAACACCTTaGAGGCCTTGGCCTGGAGCT | + |
Preference number: 4 (lower is better) Translates to: CKGTTVSVSPTFQHGLIELPQTP*RPWPGA Trigger: AGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAG...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGGGTGCAGGAAGGGCGTaGAGGCAGTGTTCATCCTCT | + |
Preference number: 4 (lower is better) Translates to: CKGTTVSVSPTFQHGLIEGAGRA*RQCSSS Trigger: AGAGGATGAACACTGCCTTCACGCCCTTCCTGCACC...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTTTTCCAGATCACCTaGTTCCCCATGAGGACATGC | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRLFQIT*FPMRTC Trigger: GCATGTCCTCATGGGGAATCAGGTGATCTGGAAAAG...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGACAACTACGAACTCTaGGGCCAGAACATGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHDNYEL*GQNMGR Trigger: CCTGCCCATGTTCTGGCCTCAGAGTTCGTAGTTGTC...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TCTCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCAACACAAAGCCGTGCTaGTCATCACCAAAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: SQFPAFVLTGHRTHLARSNTKPC*SSPKKM Trigger: CATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTT...GGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAAGTAAGCTTTGGGGGCTaGCAGCTCCCACAGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKVSFGG*QLPQAE Trigger: CTCAGCCTGTGGGAGCTGGCAGCCCCCAAAGCTTAC...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAATCAGCCTGCTCAACCTaGTCAGGACTGTCCCCACTT | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPESACST*SGLSPL Trigger: AAGTGGGGACAGTCCTGACCAGGTTGAGCAGGCTGA...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGACATCACCAAAGAAGATaGGGCCTTCACGACCAGGGC | + |
Preference number: 4 (lower is better) Translates to: RNPRAVFPTELVCTPPSRHHQRR*GLHDQG Trigger: GCCCTGGTCGTGAAGGCCCCATCTTCTTTGGTGATG...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTATGCTGTACCAGCGCTaGAAGCCTCTGGCCAGGCTG | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGMLYQR*KPLARL Trigger: CAGCCTGGCCAGAGGCTTCCAGCGCTGGTACAGCAT...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAACCTCTGGGCACGCTGTaGACATCCAAACTGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQPLGTL*TSKLLC Trigger: GCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGG...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAAGCAGTGTTCATCCTCTaGGCACGCTGTGGACATCCA | + |
Preference number: 4 (lower is better) Translates to: ETQGQFFPQSWSVHHLPEAVFIL*ARCGHP Trigger: TGGATGTCCACAGCGTGCCCAGAGGATGAACACTGC...TTCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGACAAGTTGTCATCACTaGTCAAGGAGGTCAGAGAGC | + |
Preference number: 4 (lower is better) Translates to: RASPQKSETQGQFFPQSWTSCHH*SRRSES Trigger: GCTCTCTGACCTCCTTGACCAGTGATGACAACTTGT...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCCACAGGGCTACCACTaGTCACCACAAACTCATACT | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRPQGYH*SPQTHT Trigger: AGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGG...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGTGTGGACATCCAAACTaGTCTGCCTCAAACACCTTG | + |
Preference number: 4 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRCGHPN*SASNTL Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACA...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGCTGTGCACGCTGGTTGGTCAGAGCTaGTTCAATCTTATTCAGGAT | + |
Preference number: 4 (lower is better) Translates to: GFDVSTGRQDVQRPRLCTLVGQS*FNLIQD Trigger: ATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAG...CGTGCACAGCCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAATCAGCCTGCTCAACCTaGTCAGGACTGTCCCCACTT | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQSACST*SGLSPL Trigger: AAGTGGGGACAGTCCTGACCAGGTTGAGCAGGCTGA...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGCATCACCAAAGAAGATaGGGCCTTCACGACCAGGGC | + |
Preference number: 4 (lower is better) Translates to: CKGTTVSVSPTFQHGLIEHHQRR*GLHDQG Trigger: GCCCTGGTCGTGAAGGCCCCATCTTCTTTGGTGATG...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGAGCAGTGTTCATCCTCTaGGCACGCTGTGGACATCCA | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGAVFIL*ARCGHP Trigger: TGGATGTCCACAGCGTGCCCAGAGGATGAACACTGC...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTGTGTGTCCTCCTTaGGGCGACTGTCTACCTTGG | + |
Preference number: 4 (lower is better) Translates to: CKGTTVSVSPTFQHGLIESVCPP*GDCLPW Trigger: CCAAGGTAGACAGTCGCCCCAAGGAGGACACACAGA...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTGACAACTACGAACTCTaGGGCCAGAACATGGGCAGG | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGDNYEL*GQNMGR Trigger: CCTGCCCATGTTCTGGCCTCAGAGTTCGTAGTTGTC...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGACAAACTCATACTTGCTaGGGGACTGGTCATCCTCGC | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGQTHTC*GTGHPR Trigger: GCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTG...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CCAGGCAGGCATGGAGCAGGAGGAGCTAAGAGTTCTCCATCTTCATCTGAAGGCCCAGGTTCACATCTCTaGTTTTCCAGATCACCTGAT | + |
Preference number: 4 (lower is better) Translates to: PGRHGAGGAKSSPSSSEGPGSHL*FSRSPD Trigger: ATCAGGTGATCTGGAAAAGCAGAGATGTGAACCTGG...GCCTTCAGATGAAGATGGAGAACTCTTAGCTCCTCCTGCTCCATGCCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAGGGACTTGTAGGTTTTaGTCAGTCCCGTCATCCAGA | + |
Preference number: 4 (lower is better) Translates to: RNPRAVFPTELVCTPPSRGTCRF*SVPSSR Trigger: TCTGGATGACGGGACTGAGCAAAACCTACAAGTCCC...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAACCCTTCAGCACCCTCTaGTGTAACAGGAGCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQPFSTL*CNRSFL Trigger: GAGAAAGCTCCTGTTACACCAGAGGGTGCTGAAGGG...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTTACTTGCTGAGGGACTaGTCATCCTCGCACCCAGCA | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGYLLRD*SSSHPA Trigger: TGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTA...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCTCTCTTTATCATGACTaGTATAGCCTGGGTGCCCTA | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPSLYHD*YSLGAL Trigger: TAGGGCACCCAGGCTATATCAGTCATGATAAAGAGA...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACACTTTTCCAGATCACCTaGTTCCCCATGAGGACATGC | + |
Preference number: 4 (lower is better) Translates to: QRSLMQRDHCLCVPYISTLFQIT*FPMRTC Trigger: GCATGTCCTCATGGGGAATCAGGTGATCTGGAAAAG...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTCAAACTCATACTTGCTaGGGGACTGGTCATCCTCGC | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGQTHTC*GTGHPR Trigger: GCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTG...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATTCGGACGGTGGACATaGGATGGGACTTGTAGGTTT | + |
Preference number: 4 (lower is better) Translates to: QRSLMQRDHCLCVPYISTFGRWT*DGTCRF Trigger: AAACCTACAAGTCCCATCTCATGTCCACCGTCCGAA...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCCCAGGTTCACATCTCTaGTTTTCCAGATCACCTGAT | + |
Preference number: 4 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPPGSHL*FSRSPD Trigger: ATCAGGTGATCTGGAAAAGCAGAGATGTGAACCTGG...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGAGGGACTTGTAGGTTTTaGTCAGTCCCGTCATCCAGA | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGGTCRF*SVPSSR Trigger: TCTGGATGACGGGACTGAGCAAAACCTACAAGTCCC...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACAAGGCAGATGAGACATTaGTCCACCACATCCACAGAC | + |
Preference number: 4 (lower is better) Translates to: QRSLMQRDHCLCVPYISTRQMRH*STTSTD Trigger: GTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCT...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAATGGTTGGGGTGCTGGTaGCTGACGTACTTAATAGAG | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKWLGCW*LTYLIE Trigger: CTCTATTAAGTACGTCAGTCACCAGCACCCCAACCA...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAATTGTCCCAACTTTCTaGTTCTTCCTCCAAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: RNPRAVFPTELVCTPPSRIVPTF*FFLQVS Trigger: GCTGACTTGGAGGAAGAATCAGAAAGTTGGGACAAT...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACATTGTCCCAACTTTCTaGTTCTTCCTCCAAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHIVPTF*FFLQVS Trigger: GCTGACTTGGAGGAAGAATCAGAAAGTTGGGACAAT...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAAGAACTTCAGCAGTTTaGCGTTGTCCTCCTCTGATG | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQRTSAV*RCPPLM Trigger: CATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCT...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGACTGAACACAAAGCCGTaGTGCTCATCACCAAAGAAG | + |
Preference number: 4 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGLNTKP*CSSPKK Trigger: CTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAG...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAATTCCCCATGAGGACATaGCAAGCCAACATACGGAAG | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKFPMRT*QANIRK Trigger: CTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAA...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTTTCCCCATGAGGACATaGCAAGCCAACATACGGAAG | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGFPMRT*QANIRK Trigger: CTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAA...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAATCCACAGACAGGTTCTaGTTGGTCAGAGCTGCTTCA | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKSTDRF*LVRAAS Trigger: TGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGA...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAAAGGCAGATGAGACATTaGTCCACCACATCCACAGAC | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKRQMRH*STTSTD Trigger: GTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCT...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR TCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAATCTCTTTATCATGACTaGTATAGCCTGGGTGCCCTA | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQSLYHD*YSLGAL Trigger: TAGGGCACCCAGGCTATATCAGTCATGATAAAGAGA...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACAAACACAAAGCCGTGCTaGTCATCACCAAAGAAGATG | + |
Preference number: 4 (lower is better) Translates to: QRSLMQRDHCLCVPYISTNTKPC*SSPKKM Trigger: CATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTT...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTCTGAACACAAAGCCGTaGTGCTCATCACCAAAGAAG | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGLNTKP*CSSPKK Trigger: CTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAG...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTTGTGGACATCCAAACTaGTCTGCCTCAAACACCTTG | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGCGHPN*SASNTL Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACA...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAAACAAGTTGTCATCACTaGTCAAGGAGGTCAGAGAGC | + |
Preference number: 4 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKTSCHH*SRRSES Trigger: GCTCTCTGACCTCCTTGACCAGTGATGACAACTTGT...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CCA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTCAGACAGGTTCTGGTTaGTCAGAGCTGCTTCAATCT | + |
Preference number: 4 (lower is better) Translates to: VSVSPTFQHGLIESYKEGQTGSG*SELLQS Trigger: AGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTG...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR GCA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAACTGGTTGGTCAGAGCTaGTTCAATCTTATTCAGGAT | + |
Preference number: 4 (lower is better) Translates to: VIVYSGWLALRQQQRRKQLVGQS*FNLIQD Trigger: ATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAG...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | ACCGGCAGCCCTCACACATGTCCGACTTCTTGGGCCCCGGGCTGCTaGACTCACTGCTGGCACCCTCGGCTGGGCTGTGGGCACGGACCC | + |
Preference number: 5 (lower is better) Translates to: TGSPHTCPTSWAPGC*THCWHPRLGCGHGP Trigger: GGGTCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTGAGGGCTGCCGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | CCTCACACATGTCCGACTTCTTGGGCCCCGGGCTGCTGGACTCACTaGTGGCACCCTCGGCTGGGCTGTGGGCACGGACCCGGCTGCTCA | + |
Preference number: 5 (lower is better) Translates to: PHTCPTSWAPGCWTH*WHPRLGCGHGPGCS Trigger: TGAGCAGCCGGGTCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | GTGACCGGCAGCCCTCACACATGTCCGACTTCTTGGGCCCCGGGCTaGTGGACTCACTGCTGGCACCCTCGGCTGGGCTGTGGGCACGGA | + |
Preference number: 5 (lower is better) Translates to: VTGSPHTCPTSWAPG*WTHCWHPRLGCGHG Trigger: TCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTGAGGGCTGCCGGTCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | CTTCTTGGGCCCCGGGCTGCTGGACTCACTGCTGGCACCCTCGGCTaGGCTGTGGGCACGGACCCGGCTGCTCATCTGAATGCCACCCTC | + |
Preference number: 5 (lower is better) Translates to: LLGPRAAGLTAGTLG*AVGTDPAAHLNATL Trigger: GAGGGTGGCATTCAGATGAGCAGCCGGGTCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047706.3 ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | CACACATGTCCGACTTCTTGGGCCCCGGGCTGCTGGACTCACTGCTaGCACCCTCGGCTGGGCTGTGGGCACGGACCCGGCTGCTCATCT | + |
Preference number: 5 (lower is better) Translates to: HTCPTSWAPGCWTHC*HPRLGCGHGPGCSS Trigger: AGATGAGCAGCCGGGTCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047706.3 ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | CTGGTCAAGGAGGTCAGAGAGCGGGCAGCGTTGCCGTTCCTCTGGTaGAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTGGGCACGCTGT | + |
Preference number: 5 (lower is better) Translates to: LVKEVRERAALPFLW*RKGVKAVFILWARC Trigger: ACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCTGACCTCCTTGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | TCACTGGTCAAGGAGGTCAGAGAGCGGGCAGCGTTGCCGTTCCTCTaGTGCAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTGGGCACGC | + |
Preference number: 5 (lower is better) Translates to: SLVKEVRERAALPFL*CRKGVKAVFILWAR Trigger: GCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCTGACCTCCTTGACCAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | GGGACTGGTCATCCTCGCACCCAGCAGGGTGGAGGTTTGAGCGAGTaGCCGTGTGGACCTCCACGACAACTACGAACTCTGAGGCCAGAA | + |
Preference number: 5 (lower is better) Translates to: GTGHPRTQQGGGLSE*PCGPPRQLRTLRPE Trigger: TTCTGGCCTCAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGAGAGAGCGGGCAGCGTaGCCGTTCCTCTGGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: RASPQKSETQGQFFPQSWRERAA*PFLWCR Trigger: CCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCT...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | TCAGAGAGCGGGCAGCGTTGCCGTTCCTCTGGTGCAGGAAGGGCGTaGAGGCAGTGTTCATCCTCTGGGCACGCTGTGGACATCCAAACT | + |
Preference number: 5 (lower is better) Translates to: SESGQRCRSSGAGRA*RQCSSSGHAVDIQT Trigger: AGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | TCATCCTCGCACCCAGCAGGGTGGAGGTTTGAGCGAGTGGCCGTGTaGACCTCCACGACAACTACGAACTCTGAGGCCAGAACATGGGCA | + |
Preference number: 5 (lower is better) Translates to: SSSHPAGWRFERVAV*TSTTTTNSEARTWA Trigger: TGCCCATGTTCTGGCCTCAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | CTGCAGCCACAGGGCTACCACTGGTCACCACAAACTCATACTTGCTaGGGGACTGGTCATCCTCGCACCCAGCAGGGTGGAGGTTTGAGC | + |
Preference number: 5 (lower is better) Translates to: LQPQGYHWSPQTHTC*GTGHPRTQQGGGLS Trigger: GCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGGCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | GGGTGTCCTCTGTGGGAGCGCCCTCTAAGAGCTTTTCTGTCAGCCTaGTACCGCATGCCTTCAGGAGCCAGGCAAAGGAAGTGTGCAGAC | + |
Preference number: 5 (lower is better) Translates to: GCPLWERPLRAFLSA*YRMPSGARQRKCAD Trigger: GTCTGCACACTTCCTTTGCCTGGCTCCTGAAGGCATGCGGTAGCAGGCTGACAGAAAAGCTCTTAGAGGGCGCTCCCACAGAGGACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | GCCAGGCAAAGGAAGTGTGCAGACACGCCCACAAGTTGTCATCACTaGTCAAGGAGGTCAGAGAGCGGGCAGCGTTGCCGTTCCTCTGGT | + |
Preference number: 5 (lower is better) Translates to: ARQRKCADTPTSCHH*SRRSESGQRCRSSG Trigger: ACCAGAGGAACGGCAACGCTGCCCGCTCTCTGACCTCCTTGACCAGTGATGACAACTTGTGGGCGTGTCTGCACACTTCCTTTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | AACTCATACTTGCTGAGGGACTGGTCATCCTCGCACCCAGCAGGGTaGAGGTTTGAGCGAGTGGCCGTGTGGACCTCCACGACAACTACG | + |
Preference number: 5 (lower is better) Translates to: NSYLLRDWSSSHPAG*RFERVAVWTSTTTT Trigger: CGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | ACAGGGCTACCACTGGTCACCACAAACTCATACTTGCTGAGGGACTaGTCATCCTCGCACCCAGCAGGGTGGAGGTTTGAGCGAGTGGCC | + |
Preference number: 5 (lower is better) Translates to: TGLPLVTTNSYLLRD*SSSHPAGWRFERVA Trigger: GGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TCTCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTCTGCCTCAAACACCTaGAAGGCCTTGGCCTGGAGC | + |
Preference number: 5 (lower is better) Translates to: SQFPAFVLTGHRTHLARSSASNT*KALAWS Trigger: GCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGA...GGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGTCTGCCTCAAACACCTaGAAGGCCTTGGCCTGGAGC | + |
Preference number: 5 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLSASNT*KALAWS Trigger: GCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGA...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | GGAAGTTGCAGCGATAGGCCTCCTCATACTGGCTGCTGTAAGGGATaGTGCGGACACAGCCCACAGGCAGCATGGTCCGGAGGACTTCAA | + |
Preference number: 5 (lower is better) Translates to: GSCSDRPPHTGCCKG*CGHSPQAAWSGGLQ Trigger: TTGAAGTCCTCCGGACCATGCTGCCTGTGGGCTGTGTCCGCATCATCCCTTACAGCAGCCAGTATGAGGAGGCCTATCGCTGCAACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | GTGCAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTGGGCACGCTGTaGACATCCAAACTGCTCTGCCTCAAACACCTTGAAGGCCTTGGC | + |
Preference number: 5 (lower is better) Translates to: VQEGREGSVHPLGTL*TSKLLCLKHLEGLG Trigger: GCCAAGGCCTTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | CCGTTCCTCTGGTGCAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTaGGCACGCTGTGGACATCCAAACTGCTCTGCCTCAAACACCTTG | + |
Preference number: 5 (lower is better) Translates to: PFLWCRKGVKAVFIL*ARCGHPNCSASNTL Trigger: CAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | CCTCCAAGTCAGCAAGCTTCTCCATCTGGACCAGGGTGTCCTCTGTaGGAGCGCCCTCTAAGAGCTTTTCTGTCAGCCTGCTACCGCATG | + |
Preference number: 5 (lower is better) Translates to: PPSQQASPSGPGCPL*ERPLRAFLSACYRM Trigger: CATGCGGTAGCAGGCTGACAGAAAAGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGGTCCAGATGGAGAAGCTTGCTGACTTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | GTGAAGGCAGTGTTCATCCTCTGGGCACGCTGTGGACATCCAAACTaGTCTGCCTCAAACACCTTGAAGGCCTTGGCCTGGAGCTCACTG | + |
Preference number: 5 (lower is better) Translates to: VKAVFILWARCGHPN*SASNTLKALAWSSL Trigger: CAGTGAGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AGGGCCTCACCCCAGAAGTCAGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGCTGGCCAGGCTGTCTTaGATGAAGAAGGTGTGGCTG | + |
Preference number: 5 (lower is better) Translates to: RASPQKSETQGQFFPQSWLARLS*MKKVWL Trigger: CAGCCACACCTTCTTCATCAAAGACAGCCTGGCCAG...CCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCTGACTTCTGGGGTGAGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TTTCAGTCCATTATCATCAAGGTGGGAACATGGCAGCTTCCAGGCAGGCATGGAAGAGAGCGGGCAGCGTaGCCGTTCCTCTGGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: FQSIIIKVGTWQLPGRHGRERAA*PFLWCR Trigger: CCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCT...TCCATGCCTGCCTGGAAGCTGCCATGTTCCCACCTTGATGATAATGGACTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TCAGTTCCCAGCCTTTGTCCTCACGGGGCACAGAACACATCTCGCCAGGTCCTGAGACACGCCCACAAGTaGTCATCACTGGTCAAGGAG | + |
Preference number: 5 (lower is better) Translates to: SVPSLCPHGAQNTSRQVLRHAHK*SSLVKE Trigger: CTCCTTGACCAGTGATGACAACTTGTGGGCGTGTCT...CAGGACCTGGCGAGATGTGTTCTGTGCCCCGTGAGGACAAAGGCTGGGAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGTTCTGTGTGTCCTCCTaGGGGCGACTGTCTACCTTG | + |
Preference number: 5 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRFCVSS*GRLSTL Trigger: CAAGGTAGACAGTCGCCCCAAGGAGGACACACAGAA...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | GCGGACACAGCCCACAGGCAGCATGGTCCGGAGGACTTCAAACGCTaGATGGACCAGGTTCACATCTCTGCTTTTCCAGATCACCTGATT | + |
Preference number: 5 (lower is better) Translates to: ADTAHRQHGPEDFKR*MDQVHISAFPDHLI Trigger: AATCAGGTGATCTGGAAAAGCAGAGATGTGAACCTGGTCCATTCAGCGTTTGAAGTCCTCCGGACCATGCTGCCTGTGGGCTGTGTCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | GCCAGGCTGTCTTTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTaGTGCTCATCACCAAAGAAGATGGGGCCTTCACGACCAGGGCAT | + |
Preference number: 5 (lower is better) Translates to: ARLSLMKKVWLNTKP*CSSPKKMGPSRPGH Trigger: ATGCCCTGGTCGTGAAGGCCCCATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAAGACAGCCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | TGTCTCATGTGTCGAAGAGACTTGAAGCCGGTAAGCTTTGGGGGCTaGCAGCTCCCACAGGCTGAGAGAAAGGATGACTCTGTTGGGCAA | + |
Preference number: 5 (lower is better) Translates to: CLMCRRDLKPVSFGG*QLPQAERKDDSVGQ Trigger: TTGCCCAACAGAGTCATCCTTTCTCTCAGCCTGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTCAAGTCTCTTCGACACATGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | CTCCAACAACAAAACCTCAGAGGCAGACTGATGGACTCCTCTCAGTTCCCAGCCTTCTGTGTGTCCTCCTaGGGGCGACTGTCTACCTTG | + |
Preference number: 5 (lower is better) Translates to: LQQQNLRGRLMDSSQFPAFCVSS*GRLSTL Trigger: CAAGGTAGACAGTCGCCCCAAGGAGGACACACAGAA...GGCTGGGAACTGAGAGGAGTCCATCAGTCTGCCTCTGAGGTTTTGTTGTTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 90 bp | AGGCTGTCTTTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTGCTaGTCATCACCAAAGAAGATGGGGCCTTCACGACCAGGGCATACC | + |
Preference number: 5 (lower is better) Translates to: RLSLMKKVWLNTKPC*SSPKKMGPSRPGHT Trigger: GGTATGCCCTGGTCGTGAAGGCCCCATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAAGACAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | GGACCAGGTTCACATCTCTGCTTTTCCAGATCACCTGATTCCCCATaGGGACATGCCAAGCCAACATACGGAAGGATGGAGCACCCAAGA | + |
Preference number: 5 (lower is better) Translates to: GPGSHLCFSRSPDSP*GHAKPTYGRMEHPR Trigger: TCTTGGGTGCTCCATCCTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAATCAGGTGATCTGGAAAAGCAGAGATGTGAACCTGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | TCCCAACTTTCTGATTCTTCCTCCAAGTCAGCAAGCTTCTCCATCTaGACCAGGGTGTCCTCTGTGGGAGCGCCCTCTAAGAGCTTTTCT | + |
Preference number: 5 (lower is better) Translates to: SQLSDSSSKSASFSI*TRVSSVGAPSKSFS Trigger: AGAAAAGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGGTCCAGATGGAGAAGCTTGCTGACTTGGAGGAAGAATCAGAAAGTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | CAGCGCAGTTTGATGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACAAACACCTTGAAGGCCTaGGCCTGGAGCTCACTGATG | + |
Preference number: 5 (lower is better) Translates to: QRSLMQRDHCLCVPYISTNTLKA*AWSSLM Trigger: CATCAGTGAGCTCCAGGCCAAGGCCTTCAAGGTGTT...TGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCATCAAACTGCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAGAGGCAGATGAGACATaGGTCCACCACATCCACAGA | + |
Preference number: 5 (lower is better) Translates to: RNPRAVFPTELVCTPPSREADET*VHHIHR Trigger: TCTGTGGATGTGGTGGACCAATGTCTCATCTGCCTC...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | ACTTGTAGGTTTTGCTCAGTCCCGTCATCCAGAACTTCAGCAGTTTaGCGTTGTCCTCCTCTGATGCGCCTAGGACGCTTAGGAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: TCRFCSVPSSRTSAV*RCPPLMRLGRLGAS Trigger: AGAAGCTCCTAAGCGTCCTAGGCGCATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTGGATGACGGGACTGAGCAAAACCTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTCTGGCCAGGCTGTCTTaGATGAAGAAGGTGTGGCTG | + |
Preference number: 5 (lower is better) Translates to: VSVSPTFQHGLIESYKEGLARLS*MKKVWL Trigger: CAGCCACACCTTCTTCATCAAAGACAGCCTGGCCAG...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AGAAACCCAAGGGCAGTTTTTCCCACAGAGCTGGTCTGTACACCACCTTCCAGAACCACAAACTCATACTaGCTGAGGGACTGGTCATCC | + |
Preference number: 5 (lower is better) Translates to: RNPRAVFPTELVCTPPSRTTNSY*LRDWSS Trigger: GGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGT...TCTGGAAGGTGGTGTACAGACCAGCTCTGTGGGAAAAACTGCCCTTGGGTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AAAACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACACAGACAGGTTCTGGTaGGTCAGAGCTGCTTCAATC | + |
Preference number: 5 (lower is better) Translates to: KTAMVLMYPQAGKMCRGHTDRFW*VRAASI Trigger: GATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGT...GTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | GTCATAGTCTACAGTGGCTGGTTAGCGCTACGGCAGCAACAGAGAAGAAAGCAAGAGGCAGATGAGACATaGGTCCACCACATCCACAGA | + |
Preference number: 5 (lower is better) Translates to: VIVYSGWLALRQQQRRKQEADET*VHHIHR Trigger: TCTGTGGATGTGGTGGACCAATGTCTCATCTGCCTC...TTGCTTTCTTCTCTGTTGCTGCCGTAGCGCTAACCAGCCACTGTAGACTATGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 90 bp | AACGCTGAATGGACCAGGTTCACATCTCTGCTTTTCCAGATCACCTaGTTCCCCATGAGGACATGCCAAGCCAACATACGGAAGGATGGA | + |
Preference number: 5 (lower is better) Translates to: NAEWTRFTSLLFQIT*FPMRTCQANIRKDG Trigger: TCCATCCTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAATCAGGTGATCTGGAAAAGCAGAGATGTGAACCTGGTCCATTCAGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | TTGAGGCAGATGAGACATTGGTCCACCACATCCACAGACAGGTTCTaGTTGGTCAGAGCTGCTTCAATCTTATTCAGGATAGTGGGCCCA | + |
Preference number: 5 (lower is better) Translates to: LRQMRHWSTTSTDRF*LVRAASILFRIVGP Trigger: TGGGCCCACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGACAGACAGGTTCTGGTaGGTCAGAGCTGCTTCAATC | + |
Preference number: 5 (lower is better) Translates to: CKGTTVSVSPTFQHGLIETDRFW*VRAASI Trigger: GATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGT...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AACAGCCATGGTTTTGATGTATCCACAGGCCGGCAAGATGTGCAGAGGCCACGGAACAGGACTTTCACTTaGTTCATCCATTCCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: NSHGFDVSTGRQDVQRPRNRTFT*FIHSSL Trigger: CAAGGAGGAATGGATGAACAAAGTGAAAGTCCTGTT...CCGTGGCCTCTGCACATCTTGCCGGCCTGTGGATACATCAAAACCATGGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 90 bp | ACTTTCACTTTGTTCATCCATTCCTCCTTGAGGCAGATGAGACATTaGTCCACCACATCCACAGACAGGTTCTGGTTGGTCAGAGCTGCT | + |
Preference number: 5 (lower is better) Translates to: TFTLFIHSSLRQMRH*STTSTDRFWLVRAA Trigger: AGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCTCAAGGAGGAATGGATGAACAAAGTGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | GTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGTCTTACAAGGAGGGTACCACAAACTCATACTaGCTGAGGGACTGGTCATCC | + |
Preference number: 5 (lower is better) Translates to: VSVSPTFQHGLIESYKEGTTNSY*LRDWSS Trigger: GGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGT...ACCCTCCTTGTAAGACTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | AATGATCCACGATGCTTGCTGTCTTCCATGGTGGGAAGGCGTTGTCCTAACCCCAACAGGACTTTCACTTaGTTCATCCATTCCTCCTTG | + |
Preference number: 5 (lower is better) Translates to: NDPRCLLSSMVGRRCPNPNRTFT*FIHSSL Trigger: CAAGGAGGAATGGATGAACAAAGTGAAAGTCCTGTT...GGGGTTAGGACAACGCCTTCCCACCATGGAAGACAGCAAGCATCGTGGATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | TGCAAAGGGACCACTGTCTCTGTGTCCCCTACATTTCAACATGGGCTGATAGAGCAGAACTTCAGCAGTTaGACGTTGTCCTCCTCTGAT | + |
Preference number: 5 (lower is better) Translates to: CKGTTVSVSPTFQHGLIEQNFSS*TLSSSD Trigger: ATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTG...CTCTATCAGCCCATGTTGAAATGTAGGGGACACAGAGACAGTGGTCCCTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS-3UTR CAA 90 bp | CAGGAGGATTGCTACAAGTCTGGAAGTAGCAGAGGCCACACCATGAGTTCTAAACAGAACTTCAGCAGTTaGACGTTGTCCTCCTCTGAT | + |
Preference number: 5 (lower is better) Translates to: QEDCYKSGSSRGHTMSSKQNFSS*TLSSSD Trigger: ATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTG...TTTAGAACTCATGGTGTGGCCTCTGCTACTTCCAGACTTGTAGCAATCCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | CCCCGGGCTGCTGGACTCACTGCTGGCACCCTCGGCTaGGCTGTGGGCACGGACCCGGCTGCTCATCTGAAT | + |
Preference number: 6 (lower is better) Translates to: PRAAGLTAGTLG*AVGTDPAAHLN Trigger: ATTCAGATGAGCAGCCGGGTCCGTGCCCACAGCCCAGCCGAGGGTGCCAGCAGTGAGTCCAGCAGCCCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047706.3 ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | GGGCATACCTCACAGCTCAGGCTCCGGACACAGGCCTaGCGGACGATGCTGAAGAGCTGCGGGTGGTTGGGG | + |
Preference number: 6 (lower is better) Translates to: GHTSQLRLRTQA*RTMLKSCGWLG Trigger: CCCCAACCACCCGCAGCTCTTCAGCATCGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTATGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | GCAAGTGACCGGCAGCCCTCACACATGTCCGACTTCTaGGGCCCCGGGCTGCTGGACTCACTGCTGGCACCC | + |
Preference number: 6 (lower is better) Translates to: ASDRQPSHMSDF*GPGLLDSLLAP Trigger: GGGTGCCAGCAGTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGTGAGGGCTGCCGGTCACTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | GGGCAGCGTTGCCGTTCCTCTGGTGCAGGAAGGGCGTaGAGGCAGTGTTCATCCTCTGGGCACGCTGTGGAC | + |
Preference number: 6 (lower is better) Translates to: GQRCRSSGAGRA*RQCSSSGHAVD Trigger: GTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | TTGCTGAGGGACTGGTCATCCTCGCACCCAGCAGGGTaGAGGTTTGAGCGAGTGGCCGTGTGGACCTCCACG | + |
Preference number: 6 (lower is better) Translates to: LLRDWSSSHPAG*RFERVAVWTST Trigger: CGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | GGACTGGTCATCCTCGCACCCAGCAGGGTGGAGGTTTaGGCGAGTGGCCGTGTGGACCTCCACGACAACTAC | + |
Preference number: 6 (lower is better) Translates to: GLVILAPSRVEV*ASGRVDLHDNY Trigger: GTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | GAGGTCAGAGAGCGGGCAGCGTTGCCGTTCCTCTGGTaGAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTGG | + |
Preference number: 6 (lower is better) Translates to: EVRERAALPFLW*RKGVKAVFILW Trigger: CCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCTGACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | TGTAGAACTTCCGTGCAGAAGAGCGTGCGGGGGCCATaGAGCTCGCAGAAGTGGCAGAGGGCGACTATGGCG | + |
Preference number: 6 (lower is better) Translates to: CRTSVQKSVRGP*SSQKWQRATMA Trigger: CGCCATAGTCGCCCTCTGCCACTTCTGCGAGCTCCATGGCCCCCGCACGCTCTTCTGCACGGAAGTTCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047706.3 ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | GGGACTGGTCATCCTCGCACCCAGCAGGGTGGAGGTTaGAGCGAGTGGCCGTGTGGACCTCCACGACAACTA | + |
Preference number: 6 (lower is better) Translates to: GTGHPRTQQGGG*SEWPCGPPRQL Trigger: TAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | AGTGGCCGTGTGGACCTCCACGACAACTACGAACTCTaGGGCCAGAACATGGGCAGGGATAGGCACGGGAGG | + |
Preference number: 6 (lower is better) Translates to: SGRVDLHDNYEL*GQNMGRDRHGR Trigger: CCTCCCGTGCCTATCCCTGCCCATGTTCTGGCCTCAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | AAGGAGGTCAGAGAGCGGGCAGCGTTGCCGTTCCTCTaGTGCAGGAAGGGCGTGAAGGCAGTGTTCATCCTC | + |
Preference number: 6 (lower is better) Translates to: KEVRERAALPFL*CRKGVKAVFIL Trigger: GAGGATGAACACTGCCTTCACGCCCTTCCTGCACCAGAGGAACGGCAACGCTGCCCGCTCTCTGACCTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | CACCCAGCAGGGTGGAGGTTTGAGCGAGTGGCCGTGTaGACCTCCACGACAACTACGAACTCTGAGGCCAGA | + |
Preference number: 6 (lower is better) Translates to: HPAGWRFERVAV*TSTTTTNSEAR Trigger: TCTGGCCTCAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | CATCCTCGCACCCAGCAGGGTGGAGGTTTGAGCGAGTaGCCGTGTGGACCTCCACGACAACTACGAACTCTG | + |
Preference number: 6 (lower is better) Translates to: HPRTQQGGGLSE*PCGPPRQLRTL Trigger: CAGAGTTCGTAGTTGTCGTGGAGGTCCACACGGCCACTCGCTCAAACCTCCACCCTGCTGGGTGCGAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | AGCGATAGGCCTCCTCATACTGGCTGCTGTAAGGGATaGTGCGGACACAGCCCACAGGCAGCATGGTCCGGA | + |
Preference number: 6 (lower is better) Translates to: SDRPPHTGCCKG*CGHSPQAAWSG Trigger: TCCGGACCATGCTGCCTGTGGGCTGTGTCCGCATCATCCCTTACAGCAGCCAGTATGAGGAGGCCTATCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | AACTGCTCTGCCTCAAACACCTTGAAGGCCTTGGCCTaGAGCTCACTGATGATGCCGCGGATCCTCCCCAGC | + |
Preference number: 6 (lower is better) Translates to: NCSASNTLKALA*SSLMMPRILPS Trigger: GCTGGGGAGGATCCGCGGCATCATCAGTGAGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGAGCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | GCCACAGGGCTACCACTGGTCACCACAAACTCATACTaGCTGAGGGACTGGTCATCCTCGCACCCAGCAGGG | + |
Preference number: 6 (lower is better) Translates to: ATGLPLVTTNSY*LRDWSSSHPAG Trigger: CCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 90 bp | CGGAAGGATGGAGCACCCAAGACCTGTCTCATGTGTCGAAGAGACTaGAAGCCGGTAAGCTTTGGGGGCTGCCAGCTCCCACAGGCTGAG | + |
Preference number: 6 (lower is better) Translates to: RKDGAPKTCLMCRRD*KPVSFGGCQLPQAE Trigger: CTCAGCCTGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTCAAGTCTCTTCGACACATGAGACAGGTCTTGGGTGCTCCATCCTTCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 90 bp | CTGTCTGCAGCCACAGGGCTACCACTGGTCACCACAAACTCATACTaGCTGAGGGACTGGTCATCCTCGCACCCAGCAGGGTGGAGGTTT | + |
Preference number: 6 (lower is better) Translates to: LSAATGLPLVTTNSY*LRDWSSSHPAGWRF Trigger: AAACCTCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTGTGGCTGCAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | CAGGGCTACCACTGGTCACCACAAACTCATACTTGCTaGGGGACTGGTCATCCTCGCACCCAGCAGGGTGGA | + |
Preference number: 6 (lower is better) Translates to: QGYHWSPQTHTC*GTGHPRTQQGG Trigger: TCCACCCTGCTGGGTGCGAGGATGACCAGTCCCTCAGCAAGTATGAGTTTGTGGTGACCAGTGGTAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | CATCCTCTGGGCACGCTGTGGACATCCAAACTGCTCTaGCTCAAACACCTTGAAGGCCTTGGCCTGGAGCTC | + |
Preference number: 6 (lower is better) Translates to: HPLGTLWTSKLL*LKHLEGLGLEL Trigger: GAGCTCCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | TGGTGCAGGAAGGGCGTGAAGGCAGTGTTCATCCTCTaGGCACGCTGTGGACATCCAAACTGCTCTGCCTCA | + |
Preference number: 6 (lower is better) Translates to: WCRKGVKAVFIL*ARCGHPNCSAS Trigger: TGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCCTTCCTGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | AGGAAGTGTGCAGACACGCCCACAAGTTGTCATCACTaGTCAAGGAGGTCAGAGAGCGGGCAGCGTTGCCGT | + |
Preference number: 6 (lower is better) Translates to: RKCADTPTSCHH*SRRSESGQRCR Trigger: ACGGCAACGCTGCCCGCTCTCTGACCTCCTTGACCAGTGATGACAACTTGTGGGCGTGTCTGCACACTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | CAGCAAGCTTCTCCATCTGGACCAGGGTGTCCTCTGTaGGAGCGCCCTCTAAGAGCTTTTCTGTCAGCCTGC | + |
Preference number: 6 (lower is better) Translates to: QQASPSGPGCPL*ERPLRAFLSAC Trigger: GCAGGCTGACAGAAAAGCTCTTAGAGGGCGCTCCCACAGAGGACACCCTGGTCCAGATGGAGAAGCTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | GGAGCACCCAAGACCTGTCTCATGTGTCGAAGAGACTaGAAGCCGGTAAGCTTTGGGGGCTGCCAGCTCCCA | + |
Preference number: 6 (lower is better) Translates to: GAPKTCLMCRRD*KPVSFGGCQLP Trigger: TGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTCAAGTCTCTTCGACACATGAGACAGGTCTTGGGTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | ATCATGACTGATATAGCCTGGGTGCCCTACGGCAAGTaGCCGGCAGCCCTCACACATGTCCGACTTCTTGGG | + |
Preference number: 6 (lower is better) Translates to: IMTDIAWVPYGK*PAALTHVRLLG Trigger: CCCAAGAAGTCGGACATGTGTGAGGGCTGCCGGTCACTTGCCGTAGGGCACCCAGGCTATATCAGTCATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | GTGTTCATCCTCTGGGCACGCTGTGGACATCCAAACTaGTCTGCCTCAAACACCTTGAAGGCCTTGGCCTGG | + |
Preference number: 6 (lower is better) Translates to: VFILWARCGHPN*SASNTLKALAW Trigger: CCAGGCCAAGGCCTTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | TGTCGAAGAGACTTGAAGCCGGTAAGCTTTGGGGGCTaGCAGCTCCCACAGGCTGAGAGAAAGGATGACTCT | + |
Preference number: 6 (lower is better) Translates to: CRRDLKPVSFGG*QLPQAERKDDS Trigger: AGAGTCATCCTTTCTCTCAGCCTGTGGGAGCTGGCAGCCCCCAAAGCTTACCGGCTTCAAGTCTCTTCGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | GGGCGTGAAGGCAGTGTTCATCCTCTGGGCACGCTGTaGACATCCAAACTGCTCTGCCTCAAACACCTTGAA | + |
Preference number: 6 (lower is better) Translates to: GREGSVHPLGTL*TSKLLCLKHLE Trigger: TTCAAGGTGTTTGAGGCAGAGCAGTTTGGATGTCCACAGCGTGCCCAGAGGATGAACACTGCCTTCACGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | CTCAGTCCCGTCATCCAGAACTTCAGCAGTTTGACGTaGTCCTCCTCTGATGCGCCTAGGACGCTTAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LSPVIQNFSSLT*SSSDAPRTLRS Trigger: GCTCCTAAGCGTCCTAGGCGCATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTGGATGACGGGACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | CGATCCATCATGATGGCGATGATGCTGTACCAGCGCTaGAAGCCTCTGGCCAGGCTGTCTTTGATGAAGAAG | + |
Preference number: 6 (lower is better) Translates to: RSIMMAMMLYQR*KPLARLSLMKK Trigger: CTTCTTCATCAAAGACAGCCTGGCCAGAGGCTTCCAGCGCTGGTACAGCATCATCGCCATCATGATGGATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | GTTTTGCTCAGTCCCGTCATCCAGAACTTCAGCAGTTaGACGTTGTCCTCCTCTGATGCGCCTAGGACGCTT | + |
Preference number: 6 (lower is better) Translates to: VLLSPVIQNFSS*TLSSSDAPRTL Trigger: AAGCGTCCTAGGCGCATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTGGATGACGGGACTGAGCAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 90 bp | TCCTCTGATGCGCCTAGGACGCTTAGGAGCTTCTGTGTGTCCTCCTaGGGGCGACTGTCTACCTTGGTGAATTTAAACAGGACTTTCACT | + |
Preference number: 6 (lower is better) Translates to: SSDAPRTLRSFCVSS*GRLSTLVNLNRTFT Trigger: AGTGAAAGTCCTGTTTAAATTCACCAAGGTAGACAGTCGCCCCAAGGAGGACACACAGAAGCTCCTAAGCGTCCTAGGCGCATCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | TTTTGCTCAGTCCCGTCATCCAGAACTTCAGCAGTTTaGCGTTGTCCTCCTCTGATGCGCCTAGGACGCTTA | + |
Preference number: 6 (lower is better) Translates to: FCSVPSSRTSAV*RCPPLMRLGRL Trigger: TAAGCGTCCTAGGCGCATCAGAGGAGGACAACGTCAAACTGCTGAAGTTCTGGATGACGGGACTGAGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | TTGATGAAGAAGGTGTGGCTGAACACAAAGCCGTGCTaGTCATCACCAAAGAAGATGGGGCCTTCACGACCA | + |
Preference number: 6 (lower is better) Translates to: LMKKVWLNTKPC*SSPKKMGPSRP Trigger: TGGTCGTGAAGGCCCCATCTTCTTTGGTGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 90 bp | AGGCAGATGAGACATTGGTCCACCACATCCACAGACAGGTTCTGGTaGGTCAGAGCTGCTTCAATCTTATTCAGGATAGTGGGCCCAACT | + |
Preference number: 6 (lower is better) Translates to: RQMRHWSTTSTDRFW*VRAASILFRIVGPT Trigger: AGTTGGGCCCACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 90 bp | GACTTTCACTTTGTTCATCCATTCCTCCTTGAGGCAGATGAGACATaGGTCCACCACATCCACAGACAGGTTCTGGTTGGTCAGAGCTGC | + |
Preference number: 6 (lower is better) Translates to: DFHFVHPFLLEADET*VHHIHRQVLVGQSC Trigger: GCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCTCATCTGCCTCAAGGAGGAATGGATGAACAAAGTGAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS TCA 72 bp | TCACATCTCTGCTTTTCCAGATCACCTGATTCCCCATaGGGACATGCCAAGCCAACATACGGAAGGATGGAG | + |
Preference number: 6 (lower is better) Translates to: SHLCFSRSPDSP*GHAKPTYGRME Trigger: CTCCATCCTTCCGTATGTTGGCTTGGCATGTCCTCATGGGGAATCAGGTGATCTGGAAAAGCAGAGATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS GCA 72 bp | CACCACATCCACAGACAGGTTCTGGTTGGTCAGAGCTaGTTCAATCTTATTCAGGATAGTGGGCCCAACTCT | + |
Preference number: 6 (lower is better) Translates to: HHIHRQVLVGQS*FNLIQDSGPNS Trigger: AGAGTTGGGCCCACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CAA 72 bp | AGACATTGGTCCACCACATCCACAGACAGGTTCTGGTaGGTCAGAGCTGCTTCAATCTTATTCAGGATAGTG | + |
Preference number: 6 (lower is better) Translates to: RHWSTTSTDRFW*VRAASILFRIV Trigger: CACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |
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CDS CCA 72 bp | ATGAGACATTGGTCCACCACATCCACAGACAGGTTCTaGTTGGTCAGAGCTGCTTCAATCTTATTCAGGATA | + |
Preference number: 6 (lower is better) Translates to: MRHWSTTSTDRF*LVRAASILFRI Trigger: TATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAATGTCTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091246.11 ENSMUST00000102697.10 |