Pregenerated sensors for FLAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042642Ensembl transcript IDs: ENSMUST00000050398.11, ENSMUST00000107426.8, ENSMUST00000107429.10, ENSMUST00000129308.9, ENSMUST00000162701.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGGGCAGGGCCTaGGTCAGGGGCTGCGTTGGTGGCCTCATGTGGACAGCAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: RPVPRRASLREKGRA*VRGCVGGLMWTAAQ Trigger: CTGAGCTGCTGTCCACATGAGGCCACCAACGCAGCCCCTGACCCAGGCCCTGCCCTTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR CCA 90 bp | TCTGGGCCTCTGAGCAGGCTGACTCAGCCTTTCAGACAGGAATGGTaGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCCATCCTCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SGPLSRLTQPFRQEW*LGRAGGLGCSILCP Trigger: AGGACAGAGGATGGAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGAGTCAGCCTGCTCAGAGGCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 90 bp | GGTTCTGGGCCTCTGAGCAGGCTGACTCAGCCTTTCAGACAGGAATaGTGGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCCATCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GSGPLSRLTQPFRQE*WLGRAGGLGCSILC Trigger: ACAGAGGATGGAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGAGTCAGCCTGCTCAGAGGCCCAGAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 90 bp | CGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCTTTGGTaGGCTCTGGCTGTGGTTGACACTGAGACCCATCTGGAGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: RPCRQCSAWLPPLLW*ALAVVDTETHLEQL Trigger: GAGCTGCTCCAGATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 90 bp | TCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCTTTaGTGGGCTCTGGCTGTGGTTGACACTGAGACCCATCTGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SRPCRQCSAWLPPLL*WALAVVDTETHLEQ Trigger: CTGCTCCAGATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR TCA 90 bp | CCAGGAGCACAGCAGAGATGGGAGCTGAGGAGAGATTCCCCAGGGTaGGGCAGGTCAGATGGATGGACAGCTCAGAGCAAGGTTCGTGGT | + |
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Preference number: 1 (lower is better) Translates to: PGAQQRWELRRDSPG*GRSDGWTAQSKVRG Trigger: ACCACGAACCTTGCTCTGAGCTGTCCATCCATCTGACCTGCCTCACCCTGGGGAATCTCTCCTCAGCTCCCATCTCTGCTGTGCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR CCA 90 bp | CGATACATGCCCTCCCAACCTGTGCCCATTTTAATGACAGGCACCTaGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RYMPSQPVPILMTGT*RPVPRRASLREKGR Trigger: CCTGCCCTTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAAAATGGGCACAGGTTGGGAGGGCATGTATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR TCA 90 bp | TGGACAGCTCAGAGCAAGGTTCGTGGTTCTTTCTTCAGTTCTTTGTaGCCCATCCTTGGTGAAGGCCAGCTGGCTCCAGGAGTCTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: WTAQSKVRGSFFSSL*PILGEGQLAPGVLG Trigger: CCCTAAGACTCCTGGAGCCAGCTGGCCTTCACCAAGGATGGGTCACAAAGAACTGAAGAAAGAACCACGAACCTTGCTCTGAGCTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR TCA 90 bp | TATGTGCTGTCACACGTGTGCTGTGACAGGCTTGAAGGGGTGGTATaGCCTCATGGGTGCTTTCTCTTAGGGTGTCTTAGTGTATCTGAA | + |
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Preference number: 1 (lower is better) Translates to: YVLSHVCCDRLEGVV*PHGCFLLGCLSVSE Trigger: TTCAGATACACTAAGACACCCTAAGAGAAAGCACCCATGAGGTCATACCACCCCTTCAAGCCTGTCACAGCACACGTGTGACAGCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGCCTGGGTCAGGGGCTGCGTTGGTGGCCTCATGTGGACAGCAGCTCAGGGTGGGCTCTGGCTGTaGTTGACACTGAGACCCATC | + |
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Preference number: 2 (lower is better) Translates to: GRAWVRGCVGGLMWTAAQGGLWL*LTLRPI Trigger: GATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACC...CTGAGCTGCTGTCCACATGAGGCCACCAACGCAGCCCCTGACCCAGGCCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR CAA 90 bp | TGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTaGACCTCGGACCAGGAAGGCACAGCCAGAGCAACAGGCACCAAC | + |
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Preference number: 2 (lower is better) Translates to: WTPEGALPVQICQPP*TSDQEGTARATGTN Trigger: GTTGGTGCCTGTTGCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATGGGAGAGCTGGGCTGCAGGTTCCACCCCAGAAGCTGCAGCCACACCTCCCCTCCTCTCCTTTGGTaGGCTCTGGCTGTGGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: KMGELGCRFHPRSCSHTSPPLLW*ALAVVD Trigger: GTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGG...GGAGGTGTGGCTGCAGCTTCTGGGGTGGAACCTGCAGCCCAGCTCTCCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCGGTGGGCTCTGGCTGTaGTTGACACTGAGACCCATC | + |
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Preference number: 2 (lower is better) Translates to: PGKLNFPSMQAVLCLVASGGLWL*LTLRPI Trigger: GATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACC...GGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CAA 90 bp | CAGGAAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTaGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: QESSTSRPCRQCSAW*PPLLWWALAVVDTE Trigger: CTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTTTGCCTCCTCTCCTTTaGTGGGCTCTGGCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QAGLAAPSSVLHSQESSTLPPLL*WALAVV Trigger: AACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAA...AGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTACACTTTACTGACATaGCAGGTAGCCCAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PGKLNFPSMQAVLCLVASYTLLT*QVAQAS Trigger: GCTGGCCTGGGCTACCTGTCATGTCAGTAAAGTGTA...GGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAAGGGTGTGGACACTGCCTTTGGGACCTTTTATTCACTGTCCCCACCCTCTGTCAGCCTCCCTTaGCCTCGGACCAGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QQKGVDTAFGTFYSLSPPSVSLP*PRTRKA Trigger: TGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGA...GGGTGGGGACAGTGAATAAAAGGTCCCAAAGGCAGTGTCCACACCCTTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR CCA 90 bp | TTAATGACAGGCACCTGGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGTTCAGACAGGAATGGTaGTTAGGGCGGGCAGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: LMTGTWRPVPRRASLREKFRQEW*LGRAGG Trigger: CCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAA...CTTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR GCA 90 bp | CAATGGCTAGGCCAAAGAGTGCTACTAAGGGTAAGGGTGGGGATGGGGGTGGGGTTCAAAGAAAGCAAGTaGTGGTGGCTGCCAACGGCA | + |
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Preference number: 2 (lower is better) Translates to: QWLGQRVLLRVRVGMGVGFKESK*WWLPTA Trigger: TGCCGTTGGCAGCCACCAGCACTTGCTTTCTTTGAA...CCCCACCCCCATCCCCACCCTTACCCTTAGTAGCACTCTTTGGCCTAGCCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTAGCGGGCAGGCGGGCTTaGCTGCTCCATCCTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSSTWVGGLTVPIFGGILAGRRA*LLHPLS Trigger: GGACAGAGGATGGAGCAGCCAAGCCCGCCTGCCCGC...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGAGTCTTAGGGCTATAGAAAAGATGGGAGAGCTGGGCTGCAGGTTCCACTACACTTTACTGACATaGCAGGTAGCCCAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRSLRAIEKMGELGCRFHYTLLT*QVAQAS Trigger: GCTGGCCTGGGCTACCTGTCATGTCAGTAAAGTGTA...GTGGAACCTGCAGCCCAGCTCTCCCATCTTTTCTATAGCCCTAAGACTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCTTGATACACCAGCAACAAAGAAGGATGTAGGCGACTTCCTTCAGGGTTCGCTCGAAGGGCATCTCTaGGAGAGAAGGGCAGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: FLDTPATKKDVGDFLQGSLEGHL*ERRAGP Trigger: AGGCCCTGCCCTTCTCTCTCAGAGATGCCCTTCGAG...CGAACCCTGAAGGAAGTCGCCTACATCCTTCTTTGTTGCTGGTGTATCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR GCA 90 bp | CAATGGCTAGGCCAAAGAGTGCTACTAAGGGTAAGGGTGGGGATGGGGGTGGGGTTGGTGGGCTCACTGTaGCAATTTTTGGAGGAATAT | + |
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Preference number: 2 (lower is better) Translates to: QWLGQRVLLRVRVGMGVGLVGSL*QFLEEY Trigger: ATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAA...CCCCACCCCCATCCCCACCCTTACCCTTAGTAGCACTCTTTGGCCTAGCCATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCTGGGAAAAGGCTGAGTCTTTGGGTCCTCATCCTAGCATCCCAGGCCTCCTTTCCAAGCACACATaGCCTCATTCCCCTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IFWEKAESLGPHPSIPGLLSKHT*PHSPLN Trigger: ATTCAAAGGGGAATGAGGGCATGTGTGCTTGGAAAG...GAGGCCTGGGATGCTAGGATGAGGACCCAAAGACTCAGCCTTTTCCCAGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR-3UTR CCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTATTAATGACAGGCACCTaGAGGCCAGTGCCTCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSSTWVGGLTVPIFGGILLMTGT*RPVPRR Trigger: CCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAA...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTATTCACTGAAGAATGTGCTGTATAGATCAGGATGGTCTCAAAATCTTCCAATGGCTTTTCTGTTTTaGTCTTCCCTCCTGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: TYSLKNVLYRSGWSQNLPMAFLF*SSLLAT Trigger: TGTTGCCAGGAGGGAAGAGCAAAACAGAAAAGCCAT...TGGAAGATTTTGAGACCATCCTGATCTATACAGCACATTCTTCAGTGAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR CCA 72 bp | CCTCTGAGCAGGCTGACTCAGCCTTTCAGACAGGAATaGTGGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PLSRLTQPFRQE*WLGRAGGLGCS Trigger: GGAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGAGTCAGCCTGCTCAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCTTTCAGACAGGAATGGTGGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCCCCCTTCCCTCTGTCTaGTCCCCAGCTTGTGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: SAFQTGMVVRAGRRAWLLPLPSV*SPACVR Trigger: TCTCACACAAGCTGGGGACAAGACAGAGGGAAGGGG...GAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR CAA 90 bp | GGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTTCGTTGCCTCCTCTCCTTaGGTGGGCTCTGGCTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: GGLGCSILCPPQPGKLNFVASSP*VGSGCG Trigger: ACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAAC...GAAGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | CAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTaGCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: QLPVHAGSALPG*LLSFGGLWLWL Trigger: CAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | GGAAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTaGCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GKLNFPSMQAVL*LVASSPLVGSG Trigger: GCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 72 bp | AGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTaGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSTSRPCRQCSA*LPPLLWWALAV Trigger: CACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR-3UTR CAA 90 bp | CAGGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTCCCCTTCCCTCTGTCTaGTCCCCAGCTTGTGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QAGLAAPSSVLHSQESSTPLPSV*SPACVR Trigger: TCTCACACAAGCTGGGGACAAGACAGAGGGAAGGGG...AGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR TCA 72 bp | AGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTTaGCCTCGGACCAGGAAGGCACAGCCAGAGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: REHCQFRSVSLP*PRTRKAQPEQQ Trigger: CTGTTGCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | AGCCAGGAAAGCTCAACTTCCCGTCCATGCAGGCAGTaGTCTGCCTGGTTGCCTCCTCTCCTTTGGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SQESSTSRPCRQ*SAWLPPLLWWA Trigger: AGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 72 bp | AGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCTTTGGTaGGCTCTGGCTGTGGTTGACACTGAGACCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: RQCSAWLPPLLW*ALAVVDTETHL Trigger: CAGATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGCAGAGCACTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR TCA 72 bp | CAGCAGAGATGGGAGCTGAGGAGAGATTCCCCAGGGTaGGGCAGGTCAGATGGATGGACAGCTCAGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: QQRWELRRDSPG*GRSDGWTAQSK Trigger: CTTGCTCTGAGCTGTCCATCCATCTGACCTGCCTCACCCTGGGGAATCTCTCCTCAGCTCCCATCTCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR CCA 72 bp | CCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTaGTTGACACTGAGACCCATCTGGAGCAGCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PGCLLSFGGLWL*LTLRPIWSSSF Trigger: AAAGGAGCTGCTCCAGATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| 3UTR CCA 72 bp | CCCTCCCAACCTGTGCCCATTTTAATGACAGGCACCTaGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSQPVPILMTGT*RPVPRRASLRE Trigger: CTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAAAATGGGCACAGGTTGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | AGTCTTAGGGCTATAGAAAAGATGGGAGAGCTGGGCTaGAGGTTCCACCCCAGAAGCTGCAGCCACACCTCC | + |
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Preference number: 3 (lower is better) Translates to: SLRAIEKMGELG*RFHPRSCSHTS Trigger: GGAGGTGTGGCTGCAGCTTCTGGGGTGGAACCTGCAGCCCAGCTCTCCCATCTTTTCTATAGCCCTAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | GGCAAGTCAGGAGGCCATTCACTCACGCAGATTATGTaGTGTCACACGTGTGCTGTGACAGGCTTGAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKSGGHSLTQIM*CHTCAVTGLKG Trigger: CCCCTTCAAGCCTGTCACAGCACACGTGTGACAGCACATAATCTGCGTGAGTGAATGGCCTCCTGACTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR CCA 72 bp | GCTGAGGAGAGATTCCCCAGGGTGAGGCAGGTCAGATaGATGGACAGCTCAGAGCAAGGTTCGTGGTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: AEERFPRVRQVR*MDSSEQGSWFF Trigger: AAAGAACCACGAACCTTGCTCTGAGCTGTCCATCCATCTGACCTGCCTCACCCTGGGGAATCTCTCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR GCA 72 bp | GCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTGGCTaGCAACGGCAAGTCAGGAGGCCATTCACTCACGCA | + |
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Preference number: 3 (lower is better) Translates to: AANSSKKASAGG*QRQVRRPFTHA Trigger: TGCGTGAGTGAATGGCCTCCTGACTTGCCGTTGGCAGCCACCAGCACTTGCTTTCTTTGAACTGTTAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR TCA 72 bp | CAGAGCAAGGTTCGTGGTTCTTTCTTCAGTTCTTTGTaGCCCATCCTTGGTGAAGGCCAGCTGGCTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: QSKVRGSFFSSL*PILGEGQLAPG Trigger: TCCTGGAGCCAGCTGGCCTTCACCAAGGATGGGTCACAAAGAACTGAAGAAAGAACCACGAACCTTGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
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| 3UTR CCA 72 bp | CCCTCCTGGCAACAGAGATTCAGCAAAGCTGGTTCTTaGTCTCACTACTCCCGAGATCTGTCCTTCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: PSWQQRFSKAGS*SHYSRDLSFFL Trigger: CAGGAAGAAGGACAGATCTCGGGAGTAGTGAGACCAAGAACCAGCTTTGCTGAATCTCTGTTGCCAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR CCA 72 bp | TTCCTTAGGACAGGGAGCTGCCTAGGTCACATCTTCTaGGAAAAGGCTGAGTCTTTGGGTCCTCATCCTAGC | + |
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Preference number: 3 (lower is better) Translates to: FLRTGSCLGHIF*EKAESLGPHPS Trigger: GCTAGGATGAGGACCCAAAGACTCAGCCTTTTCCCAGAAGATGTGACCTAGGCAGCTCCCTGTCCTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR CCA 72 bp | GGCTGTGGTATAGGGAGAGGAGTAGGTACAAAGTCCTaGGTTCAGTCCCCAACACGGAAACTCAACCAACCA | + |
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Preference number: 3 (lower is better) Translates to: GCGIGRGVGTKS*VQSPTRKLNQP Trigger: TGGTTGGTTGAGTTTCCGTGTTGGGGACTGAACCCAGGACTTTGTACCTACTCCTCTCCCTATACCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| 3UTR TCA 72 bp | TCACACGTGTGCTGTGACAGGCTTGAAGGGGTGGTATaGCCTCATGGGTGCTTTCTCTTAGGGTGTCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SHVCCDRLEGVV*PHGCFLLGCLS Trigger: ACTAAGACACCCTAAGAGAAAGCACCCATGAGGTCATACCACCCCTTCAAGCCTGTCACAGCACACGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR CCA 72 bp | TGCTCTTCCCTCCTGGCAACAGAGATTCAGCAAAGCTaGTTCTTGGTCTCACTACTCCCGAGATCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSSLLATEIQQS*FLVSLLPRSVL Trigger: AAGGACAGATCTCGGGAGTAGTGAGACCAAGAACCAGCTTTGCTGAATCTCTGTTGCCAGGAGGGAAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCATTCTGTCCTCTCTGCACAAAAGTTGGGAGGAACATGGCTTTTCTGTTTCTTCAAGTACGTGGGTaGGTGGGCTCACTGTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: APFCPLCTKVGRNMAFLFLQVRG*VGSLCQ Trigger: TTGGCACAGTGAGCCCACCAACCCACGTACTTGAAG...AAACAGAAAAGCCATGTTCCTCCCAACTTTTGTGCAGAGAGGACAGAATGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR CCA 72 bp | AAAACAAAGGCTCTAGGGTCTAGCAAAAGAAGGTTCTaGGCCTCTGAGCAGGCTGACTCAGCCTTTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KTKALGSSKRRF*ASEQADSAFQT Trigger: TGTCTGAAAGGCTGAGTCAGCCTGCTCAGAGGCCCAGAACCTTCTTTTGCTAGACCCTAGAGCCTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| 3UTR CCA 72 bp | CAGGTCAGATGGATGGACAGCTCAGAGCAAGGTTCGTaGTTCTTTCTTCAGTTCTTTGTGACCCATCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QVRWMDSSEQGS*FFLQFFVTHPW Trigger: CCAAGGATGGGTCACAAAGAACTGAAGAAAGAACCACGAACCTTGCTCTGAGCTGTCCATCCATCTGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| 3UTR TCA 72 bp | GAGGTGTTCCCTGCCACCATTAATCCAGCAGTTCCTTaGTACACCAGCAACAAAGAAGGATGTAGGCGACTT | + |
|
Preference number: 3 (lower is better) Translates to: EVFPATINPAVP*YTSNKEGCRRL Trigger: AAGTCGCCTACATCCTTCTTTGTTGCTGGTGTATCAAGGAACTGCTGGATTAATGGTGGCAGGGAACACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTGCTCTTCCCTCCTGGCAACAGAGATTCAGCAAAGCTGGTTCTTGGTCTCTGCCCTCATTCCCCTTaGAATGTTCAGAATTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLFPPGNRDSAKLVLGLCPHSP*NVQNFW Trigger: CCAAAAATTCTGAACATTCAAAGGGGAATGAGGGCA...GAGACCAAGAACCAGCTTTGCTGAATCTCTGTTGCCAGGAGGGAAGAGCAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR CCA 72 bp | AAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTaGAGGAATATTAGATCCTGCCGTAGTCTCAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KYVGWWAHCANF*RNIRSCRSLNG Trigger: TCCATTGAGACTACGGCAGGATCTAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| 3UTR CCA 72 bp | CCAGCCTCCGCCTCCCAAGTGCTGGAATTAAAGGTGTaGGTTACCACAACTAGTACATATAGTATCTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: PASASQVLELKV*VTTTSTYSICM Trigger: CATACAGATACTATATGTACTAGTTGTGGTAACCCACACCTTTAATTCCAGCACTTGGGAGGCGGAGGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR GCA 72 bp | CCTCATAGAATAGGGCTTGCTCCATTCTGTCCTCTCTaGACAAAAGTTGGGAGGAACATGGCTTTTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PHRIGLAPFCPL*TKVGRNMAFLF Trigger: AAACAGAAAAGCCATGTTCCTCCCAACTTTTGTGCAGAGAGGACAGAATGGAGCAAGCCCTATTCTATGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR CCA 72 bp | ACTTATTCACTGAAGAATGTGCTGTATAGATCAGGATaGTCTCAAAATCTTCCAGCCTCCGCCTCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TYSLKNVLYRSG*SQNLPASASQV Trigger: CACTTGGGAGGCGGAGGCTGGAAGATTTTGAGACCATCCTGATCTATACAGCACATTCTTCAGTGAATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR-3UTR CAA 90 bp | ACTTATTCACTGAAGAATGTGCTGTATAGATCAGGATGGTCTCAAAATCTTCCACATGGCTTTTCTGTTTaGCTCTTCCCTCCTGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TYSLKNVLYRSGWSQNLPHGFSV*LFPPGN Trigger: GTTGCCAGGAGGGAAGAGCAAAACAGAAAAGCCATG...TGGAAGATTTTGAGACCATCCTGATCTATACAGCACATTCTTCAGTGAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR CCA 72 bp | ACATATAGTATCTGTATGACAACAAAAATCAGGCTGTaGTATAGGGAGAGGAGTAGGTACAAAGTCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TYSICMTTKIRL*YRERSRYKVLG Trigger: ACCCAGGACTTTGTACCTACTCCTCTCCCTATACCACAGCCTGATTTTTGTTGTCATACAGATACTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| 3UTR TCA 72 bp | TGTGGGTTACCACAACTAGTACATATAGTATCTGTATaGCAACAAAAATCAGGCTGTGGTATAGGGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CGLPQLVHIVSV*QQKSGCGIGRG Trigger: TCCTCTCCCTATACCACAGCCTGATTTTTGTTGTCATACAGATACTATATGTACTAGTTGTGGTAACCCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGCGCCCAAAGTGGGCCTaGGCCTCCGACAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSDLSASLDLGPGRHSQRPKWA*ASDRMG Trigger: CCCCATCCTGTCGGAGGCTCAGGCCCACTTTGGGCG...CTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCTGCCTGCTGTCACGCTaGGCCCTGATCCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLPPLLWWALAVVDTETCLLSR*ALILGA Trigger: TGCCCCCAGGATCAGGGCGCAGCGTGACAGCAGGCA...GGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGCTGGTAGGGGACCAGTaGTCCTTGGGGCAGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDLSASLDLGPGRHSQLVGDQ*SLGQTC Trigger: GCACGTCTGCCCCAAGGATCACTGGTCCCCTACCAG...CTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GTTACTCCTGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTAGTCCTTGCCCCCATTaGAGCCCACGCAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTPGPPREHCQFRSVSLPSPCPH*SPRRAG Trigger: CCCAGCTCTGCGTGGGCTTCAATGGGGGCAAGGACT...AGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCAGGAGTAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTTCTGGGGGTGCTTTTCCTaGAGCTCACCCAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGCSILCPPQPGKLNFWGCFS*SSPRAC Trigger: GCAGGCCCTGGGTGAGCTTCAGGAAAAGCACCCCCA...GAAGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCTGCCTGCTGTCACGCTaGGCCCTGATCCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQLPVHAGSALPGCLLSCLLSR*ALILGA Trigger: TGCCCCCAGGATCAGGGCGCAGCGTGACAGCAGGCA...GGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCTGGGGGTGCTTTTCCTaGAGCTCACCCAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQLPVHAGSALPGCLLSWGCFS*SSPRAC Trigger: GCAGGCCCTGGGTGAGCTTCAGGAAAAGCACCCCCA...GGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGAGCGAAGAGGTGCAGGAGTaGGGTGCAGTCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSDLSASLDLGPGRHSQSEEVQE*GAVLAP Trigger: GGGGGCAAGGACTGCACCGCACTCCTGCACCTCTTC...GCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGGCTGCATGGAAGAGGTaGAGGAGTGCGGTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDLSASLDLGPGRHSQAAWKR*RSAVQS Trigger: GGACTGCACCGCACTCCTGCACCTCTTCCATGCAGC...CTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTCAGACAGGAATGGTGGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCAGCTCACCCAGGGCCTaGTTCATGTTACCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAFQTGMVVRAGRRAWLLSSPRA*FMLPSA Trigger: AGCCGAGGGTAACATGAAGCAGGCCCTGGGTGAGCT...GAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTCCTGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTGGTCAGTCCGTCGAGTaGCCATCAGGACAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTPGPPREHCQFRSVSLPGQSVE*PSGQPP Trigger: TGGAGGCTGTCCTGATGGGCACTCGACGGACTGACC...AGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCAGGAGTAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCCTCTGCACGGCTGCATaGAAGAGGTGCAGGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AWLPPLLWWALAVVDTETLCTAA*KRCRSA Trigger: CGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAG...GGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGAGCGACAGGGTGTCCTCCTaGGCTCAGGCACTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDLSASLDLGPGRHSQSDRVSS*AQALQG Trigger: GCCCTGAAGTGCCTGAGCCCAGGAGGACACCCTGTC...GCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GGGCAGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAGAGACTCGGCAAACCTaGACCCCCAGGGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQSIPSSSSTWVGGLTVPETRQT*TPRERR Trigger: CCTGCGCTCCCTGGGGGTCCAGGTTTGCCGAGTCTC...TGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCCTCTGCACGGCTGCATaGAAGAGGTGCAGGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KAQLPVHAGSALPGCLLSLCTAA*KRCRSA Trigger: CGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAG...GGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| 3UTR CAA 72 bp | GAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTaGACCTCGGACCAGGAAGGCACAGCCAGAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: EGALPVQICQPP*TSDQEGTARAT Trigger: TGTTGCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTGGCTGCCAACGGCGAAGAGGTGCAGGAGTaGGGTGCAGTCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VHRLLTVQRKQVLVAANGEEVQE*GAVLAP Trigger: GGGGGCAAGGACTGCACCGCACTCCTGCACCTCTTC...GCCGTTGGCAGCCACCAGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | CTATGTTACTCCTGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTGCTGCATGGAAGAGGTaGAGGAGTGCGGTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCYSWTPEGALPVQICQPAAWKR*RSAVQS Trigger: GGACTGCACCGCACTCCTGCACCTCTTCCATGCAGC...AGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCAGGAGTAACATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTAGGCCAAAGAGTGCTACTAAGGGTAAGGGTGGGGATGGGGGTGGGGAGCTCACCCAGGGCCTaGTTCATGTTACCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QWLGQRVLLRVRVGMGVGSSPRA*FMLPSA Trigger: AGCCGAGGGTAACATGAAGCAGGCCCTGGGTGAGCT...CCCCACCCCCATCCCCACCCTTACCCTTAGTAGCACTCTTTGGCCTAGCCATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGAGCAGCTCACCCAGGGCCTaGTTCATGTTACCCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSDLSASLDLGPGRHSQSSSPRA*FMLPSA Trigger: AGCCGAGGGTAACATGAAGCAGGCCCTGGGTGAGCT...GCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGCTCCCCAAAAGCCTGTaGCACTGCCTCAAAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASSDLSASLDLGPGRHSQLPKSL*HCLKGN Trigger: GTTACCTTTGAGGCAGTGGCACAGGCTTTTGGGGAG...CTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTTCAGACAGGAATGGTGGTTAGGGCGGGCAGGCGGGCTTGGCTGCTCTATGGGACAAACAGCTaGCGCAGAAACTCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAFQTGMVVRAGRRAWLLYGTNS*RRNSQM Trigger: CATCTGGGAGTTTCTGCGGCAGCTGTTTGTCCCATA...GAGCAGCCAAGCCCGCCTGCCCGCCCTAACCACCATTCCTGTCTGAAAGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTGGCTGCCAACGGCCTCTGCACGGCTGCATaGAAGAGGTGCAGGAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHRLLTVQRKQVLVAANGLCTAA*KRCRSA Trigger: CGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAG...GCCGTTGGCAGCCACCAGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | ATCTTCTGGGAAAAGGCTGAGTCTTTGGGTCCTCATCCTAGCATCCCAGGCCTCGACAGGGTGTCCTCCTaGGCTCAGGCACTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFWEKAESLGPHPSIPGLDRVSS*AQALQG Trigger: GCCCTGAAGTGCCTGAGCCCAGGAGGACACCCTGTC...GAGGCCTGGGATGCTAGGATGAGGACCCAAAGACTCAGCCTTTTCCCAGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | TTTAATGACAGGCACCTGGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGACAGGGTGTCCTCCTaGGCTCAGGCACTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNDRHLEASASKGISEREDRVSS*AQALQG Trigger: GCCCTGAAGTGCCTGAGCCCAGGAGGACACCCTGTC...TTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GGATGGCGCATGAACAAGTTGATGTATACGCATGTGCACAGGCTGCTAACAGTTCGCCCAAAGTGGGCCTaGGCCTCCGACAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWRMNKLMYTHVHRLLTVRPKWA*ASDRMG Trigger: CCCCATCCTGTCGGAGGCTCAGGCCCACTTTGGGCG...AACTGTTAGCAGCCTGTGCACATGCGTATACATCAACTTGTTCATGCGCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR TCA 90 bp | TTCCTTGATACACCAGCAACAAAGAAGGATGTAGGCGACTTCCTTCAGGGTTCGCGCCCAAAGTGGGCCTaGGCCTCCGACAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLDTPATKKDVGDFLQGSRPKWA*ASDRMG Trigger: CCCCATCCTGTCGGAGGCTCAGGCCCACTTTGGGCG...CGAACCCTGAAGGAAGTCGCCTACATCCTTCTTTGTTGCTGGTGTATCAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GCACAGCCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACGGTCAGTCCGTCGAGTaGCCATCAGGACAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQPEQQAPTMGCEVHFTDGQSVE*PSGQPP Trigger: TGGAGGCTGTCCTGATGGGCACTCGACGGACTGACC...GTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTGAGACTCGGCAAACCTaGACCCCCAGGGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQQAPTMGCEVHFTDMTGETRQT*TPRERR Trigger: CCTGCGCTCCCTGGGGGTCCAGGTTTGCCGAGTCTC...ACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCTGCACAGCTGTGTTTTaGAACAGCCCTTTCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AWLPPLLWWALAVVDTETCTAVF*NSPFSP Trigger: GGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCA...GGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCTGGGTCAGGGGCTGCGTTGGTGGCCTCATGTGGACAGCAGCTCAGCACGAATGTACAGGATCTaGAGAGGTTTTGGAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLGQGLRWWPHVDSSSARMYRI*RGFGTS Trigger: TGATGTTCCAAAACCTCTCCAGATCCTGTACATTCG...TGCTGAGCTGCTGTCCACATGAGGCCACCAACGCAGCCCCTGACCCAGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| 3UTR CAA 72 bp | GGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTaGACACTGAGACCCATCTGGAGCAGCTCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GCLLSFGGLWLW*TLRPIWSSSFL Trigger: TAGAAAGGAGCTGCTCCAGATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTAGTCCTTGCCCCCATTaGAGCCCACGCAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQQAPTMGCEVHFTDMTGSPCPH*SPRRAG Trigger: CCCAGCTCTGCGTGGGCTTCAATGGGGGCAAGGACT...ACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTTCTCCTTCAGGTGGAACTaGACAGCTGTGTTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGCSILCPPQPGKLNFSFRWN*TAVFWN Trigger: GTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGA...GAAGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GTTACTCCTGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTCCCTCTTGAAAGTAGTTGCTaGTCCAGTCAGGGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTPGPPREHCQFRSVSLPLESSC*SSQGRN Trigger: GTTCCTACCCTGACTGGAGCAGCAACTACTTTCAAG...AGGGAGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCAGGAGTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCACTTGAAAGTAGTTaGTGCTCCAGTCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKLNFPSMQAVLCLVASSLESS*CSSQGR Trigger: CCTACCCTGACTGGAGCAGCAACTACTTTCAAGTGA...GGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGAAGAGGTGCAGGAGTaGGGTGCAGTCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PEQQAPTMGCEVHFTDMTEEVQE*GAVLAP Trigger: GGGGGCAAGGACTGCACCGCACTCCTGCACCTCTTC...TGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCGGGCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTAAGCTCCGGAATTCCTaGGAAGAGGTAGACATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QAGLAAPSSVLHSQESSTKLRNS*EEVDIS Trigger: CGAAATGTCTACCTCTTCCCAGGAATTCCGGAGCTT...AGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGCCCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTAGGCCAAAGAGTGCTACTAAGGGTAAGGGTGGGGATGGGGGTGGGGTGCACAGCTGTGTTTTaGAACAGCCCTTTCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QWLGQRVLLRVRVGMGVGCTAVF*NSPFSP Trigger: GGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCA...CCCCACCCCCATCCCCACCCTTACCCTTAGTAGCACTCTTTGGCCTAGCCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | GATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTTGCCTGCTGTCACGCTaGGCCCTGATCCTGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVYACAQAANSSKKASAGCLLSR*ALILGA Trigger: TGCCCCCAGGATCAGGGCGCAGCGTGACAGCAGGCA...ACCAGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCTCCTTCAGGTGGAACTaGACAGCTGTGTTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TASSDLSASLDLGPGRHSSFRWN*TAVFWN Trigger: GTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGA...GCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCCTCTTGATGGTGTCCTaGAGAAACTGTTCCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLPPLLWWALAVVDTETLLMVS*RNCSNS Trigger: TGAGTTGGAACAGTTTCTGCAGGACACCATCAAGAG...GGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCCATTATGGGACAAACAGCTaGCGCAGAAACTCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WLPPLLWWALAVVDTETHYGTNS*RRNSQM Trigger: CATCTGGGAGTTTCTGCGGCAGCTGTTTGTCCCATA...ATGGGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTAGCCCACCAGGGCAGTCTCGATaGTCTGTAGGGCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QAPTMGCEVHFTDMTGSPPGQSR*SVGHLL Trigger: TAGCAGGTGCCCTACAGACCATCGAGACTGCCCTGG...TGGGCTACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTGCTGCATGGAAGAGGTaGAGGAGTGCGGTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFLVLQVRGLVGSLCQFAAWKR*RSAVQS Trigger: GGACTGCACCGCACTCCTGCACCTCTTCCATGCAGC...AAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTAGGCCAAAGAGTGCTACTAAGGGTAAGGGTGGGGATGGGGGTGGGGCTCTTGATGGTGTCCTaGAGAAACTGTTCCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWLGQRVLLRVRVGMGVGLLMVS*RNCSNS Trigger: TGAGTTGGAACAGTTTCTGCAGGACACCATCAAGAG...CCCCACCCCCATCCCCACCCTTACCCTTAGTAGCACTCTTTGGCCTAGCCATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | GCCTGGTTGCCTCCTCTCCTTTGGTGGGCTCTGGCTGTGGTTGACACTGAGACCCTCTGTCATATAGGATaGAGTATGGGACAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWLPPLLWWALAVVDTETLCHIG*SMGQTA Trigger: AGCTGTTTGTCCCATACTGCATCCTATATGACAGAG...GGTCTCAGTGTCAACCACAGCCAGAGCCCACCAAAGGAGAGGAGGCAACCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTAGAGACTCGGCAAACCTaGACCCCCAGGGAGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTWVGGLTVPIFGGILETRQT*TPRERR Trigger: CCTGCGCTCCCTGGGGGTCCAGGTTTGCCGAGTCTC...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | AAAACAAAGGCTCTAGGGTCTAGCAAAAGAAGGTTCTGGGCCTCTGAGCAGGCTCCAGGGCAGTCTCGATaGTCTGTAGGGCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KTKALGSSKRRFWASEQAPGQSR*SVGHLL Trigger: TAGCAGGTGCCCTACAGACCATCGAGACTGCCCTGG...AGCCTGCTCAGAGGCCCAGAACCTTCTTTTGCTAGACCCTAGAGCCTTTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCGTTGGTGGCCTCATGTGGACAGCAGCTCAGCAGAAGGGTGTGGACACTTCGGCTTCTAACACCTaGAGATTATACCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GCVGGLMWTAAQQKGVDTSASNT*RLYLLM Trigger: CATCAAGAGGTATAATCTCCAGGTGTTAGAAGCCGA...AGTGTCCACACCCTTCTGCTGAGCTGCTGTCCACATGAGGCCACCAACGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTACTGGTAGGGGACCAGTaGTCCTTGGGGCAGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSTWVGGLTVPIFGGILLVGDQ*SLGQTC Trigger: GCACGTCTGCCCCAAGGATCACTGGTCCCCTACCAG...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTAAGTCCTTGCCCCCATTaGAGCCCACGCAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTWVGGLTVPIFGGILSPCPH*SPRRAG Trigger: CCCAGCTCTGCGTGGGCTTCAATGGGGGCAAGGACT...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR TCA 90 bp | GTTGATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTTGGGGGTGCTTTTCCTaGAGCTCACCCAGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDVYACAQAANSSKKASAWGCFS*SSPRAC Trigger: GCAGGCCCTGGGTGAGCTTCAGGAAAAGCACCCCCA...AGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | CAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTAGCCCACTCCCCAAAAGCCTGTaGCACTGCCTCAAAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAPTMGCEVHFTDMTGSPLPKSL*HCLKGN Trigger: GTTACCTTTGAGGCAGTGGCACAGGCTTTTGGGGAG...TGGGCTACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | TTAATGACAGGCACCTGGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGTCACTTGAAAGTAGTTaGTGCTCCAGTCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LMTGTWRPVPRRASLREKSLESS*CSSQGR Trigger: CCTACCCTGACTGGAGCAGCAACTACTTTCAAGTGA...CTTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTGGTCAGTCCGTCGAGTaGCCATCAGGACAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVYACAQAANSSKKASAGGQSVE*PSGQPP Trigger: TGGAGGCTGTCCTGATGGGCACTCGACGGACTGACC...ACCAGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | GCACAGCCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACTGCACAGCTGTGTTTTaGAACAGCCCTTTCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AQPEQQAPTMGCEVHFTDCTAVF*NSPFSP Trigger: GGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCA...GTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGGCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTGGGAAAAGGCTGAGTCTTTGGGTCCTCATCCTAGCATCCCAGGCCTCTCACTTGAAAGTAGTTaGTGCTCCAGTCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFWEKAESLGPHPSIPGLSLESS*CSSQGR Trigger: CCTACCCTGACTGGAGCAGCAACTACTTTCAAGTGA...GAGGCCTGGGATGCTAGGATGAGGACCCAAAGACTCAGCCTTTTCCCAGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | GGGCAGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCACTCTGTCATATAGGATaGAGTATGGGACAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSIPSSSSTWVGGLTVPLCHIG*SMGQTA Trigger: AGCTGTTTGTCCCATACTGCATCCTATATGACAGAG...TGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GTTGATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTCCAGGGCAGTCTCGATaGTCTGTAGGGCACCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VDVYACAQAANSSKKASAPGQSR*SVGHLL Trigger: TAGCAGGTGCCCTACAGACCATCGAGACTGCCCTGG...AGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | ACTGCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCGATCTGGAGAGGTTTTaGAACATCAGGAAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TASSDLSASLDLGPGRHSDLERF*NIRKFS Trigger: AGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATC...GCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTAGCCCAAAAAGCCTGTGCCACTaGCTCAAAGGTAACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: QAPTMGCEVHFTDMTGSPKSLCH*LKGNII Trigger: GATGATGTTACCTTTGAGGCAGTGGCACAGGCTTTT...TGGGCTACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTCTTGAAAGTAGTTGCTaGTCCAGTCAGGGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQQAPTMGCEVHFTDMTGLESSC*SSQGRN Trigger: GTTCCTACCCTGACTGGAGCAGCAACTACTTTCAAG...ACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATGGGACAAACAGCTaGCGCAGAAACTCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVLQVRGLVGSLCQFLEEYGTNS*RRNSQM Trigger: CATCTGGGAGTTTCTGCGGCAGCTGTTTGTCCCATA...TTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | ATAGATCAGGATGGTCTCAAAATCTTCCAGCCTCCGCCTCCCAAGTGCTGGAATAAGCTCCGGAATTCCTaGGAAGAGGTAGACATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IDQDGLKIFQPPPPKCWNKLRNS*EEVDIS Trigger: CGAAATGTCTACCTCTTCCCAGGAATTCCGGAGCTT...ATTCCAGCACTTGGGAGGCGGAGGCTGGAAGATTTTGAGACCATCCTGATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | GCACAGCCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACTCGGCTTCTAACACCTaGAGATTATACCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AQPEQQAPTMGCEVHFTDSASNT*RLYLLM Trigger: CATCAAGAGGTATAATCTCCAGGTGTTAGAAGCCGA...GTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAGGCTCTAGGGTCTAGCAAAAGAAGGTTCTGGGCCTCTGAGCAGGCTCTCTTGATGGTGTCCTaGAGAAACTGTTCCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTKALGSSKRRFWASEQALLMVS*RNCSNS Trigger: TGAGTTGGAACAGTTTCTGCAGGACACCATCAAGAG...AGCCTGCTCAGAGGCCCAGAACCTTCTTTTGCTAGACCCTAGAGCCTTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACACTCTGTCATATAGGATaGAGTATGGGACAAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEQQAPTMGCEVHFTDMTLCHIG*SMGQTA Trigger: AGCTGTTTGTCCCATACTGCATCCTATATGACAGAG...TGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTCGAATGTACAGGATCTaGAGAGGTTTTGGAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: EQQAPTMGCEVHFTDMTGRMYRI*RGFGTS Trigger: TGATGTTCCAAAACCTCTCCAGATCCTGTACATTCG...ACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTGGTAAAAGCCTGTGCCACTaGCTCAAAGGTAACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: DVYACAQAANSSKKASAGKSLCH*LKGNII Trigger: GATGATGTTACCTTTGAGGCAGTGGCACAGGCTTTT...ACCAGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR GCA 90 bp | GTTGATGTATACGCATGTGCACAGGCTGCTAACAGTTCAAAGAAAGCAAGTGCTTCCTTCAGGTGGAACTaGACAGCTGTGTTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VDVYACAQAANSSKKASASFRWN*TAVFWN Trigger: GTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGA...AGCACTTGCTTTCTTTGAACTGTTAGCAGCCTGTGCACATGCGTATACATCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTCGGCTTCTAACACCTaGAGATTATACCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPFLVLQVRGLVGSLCQFSASNT*RLYLLM Trigger: CATCAAGAGGTATAATCTCCAGGTGTTAGAAGCCGA...AAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | GAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTGATCTGGAGAGGTTTTaGAACATCAGGAAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQQAPTMGCEVHFTDMTGDLERF*NIRKFS Trigger: AGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATC...ACCTGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | GAATGTTCAGAATTTTTGGCCTCGAGGCCTATTTATTATATTTATAGTGGAGTGCTCCCCAAAAGCCTGTaGCACTGCCTCAAAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECSEFLASRPIYYIYSGVLPKSL*HCLKGN Trigger: GTTACCTTTGAGGCAGTGGCACAGGCTTTTGGGGAG...CACTCCACTATAAATATAATAAATAGGCCTCGAGGCCAAAAATTCTGAACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTTGGAGGAATATTAGATCTGGAGAGGTTTTaGAACATCAGGAAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTWVGGLTVPIFGGILDLERF*NIRKFS Trigger: AGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATC...TAATATTCCTCCAAAAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR GCA 90 bp | CATTCCCCTTTGAATGTTCAGAATTTTTGGCCTCGAGGCCTATTTATTATATTTCTTGAAAGTAGTTGCTaGTCCAGTCAGGGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSPLNVQNFWPRGLFIIFLESSC*SSQGRN Trigger: GTTCCTACCCTGACTGGAGCAGCAACTACTTTCAAG...AAATATAATAAATAGGCCTCGAGGCCAAAAATTCTGAACATTCAAAGGGGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS-3UTR CCA 90 bp | GAATGTTCAGAATTTTTGGCCTCGAGGCCTATTTATTATATTTATAGTGGAGTGCGAATGTACAGGATCTaGAGAGGTTTTGGAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: ECSEFLASRPIYYIYSGVRMYRI*RGFGTS Trigger: TGATGTTCCAAAACCTCTCCAGATCCTGTACATTCG...CACTCCACTATAAATATAATAAATAGGCCTCGAGGCCAAAAATTCTGAACATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AATGACAGGCACCTGGAGGCCAGTGCCTCGAAGGGCATCTCTGAGAGAGAAGGGAGTGCGGTGCAGTCCTaGCCCCCATTGAAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: NDRHLEASASKGISEREGSAVQS*PPLKPT Trigger: CGTGGGCTTCAATGGGGGCAAGGACTGCACCGCACT...CCCTTCTCTCTCAGAGATGCCCTTCGAGGCACTGGCCTCCAGGTGCCTGTCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | CTATGTTACTCCTGGACCCCCGAGGGAGCACTGCCAGTTCAGATCTGTCAGCCTAGTGCGGTGCAGTCCTaGCCCCCATTGAAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LCYSWTPEGALPVQICQPSAVQS*PPLKPT Trigger: CGTGGGCTTCAATGGGGGCAAGGACTGCACCGCACT...AGGCTGACAGATCTGAACTGGCAGTGCTCCCTCGGGGGTCCAGGAGTAACATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS TCA 90 bp | AGCCTCACCAGCCTTCTCAACAGCATCGGGCTGGTAGGGGACCAGTaGTCCTTGGGGCAGACGTGCAGTCAGATAGGCCAGACATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTSLLNSIGLVGDQ*SLGQTCSQIGQTFL Trigger: GAGGAATGTCTGGCCTATCTGACTGCACGTCTGCCCCAAGGATCACTGGTCCCCTACCAGCCCGATGCTGTTGAGAAGGCTGGTGAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS TCA 90 bp | TTCCTGGGAAGAGGTAGACATTTCGGACAGAGACCAGCGGGAATCTaGAGGGGTGGCCGGTTCGAGGATCTGTACCGTAATGCAGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLGRGRHFGQRPAGI*RGGRFEDLYRNAGG Trigger: CCCGCCTGCATTACGGTACAGATCCTCGAACCGGCCACCCCTTCAGATTCCCGCTGGTCTCTGTCCGAAATGTCTACCTCTTCCCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 |
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| CDS CCA 90 bp | GGGGCGATAGAGCCCTCTGACGCGGCCACATACAACTCCTTCAGGTaGAACTGCACAGCTGTGTTTTGGAACAGCCCTTTCAGTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GAIEPSDAATYNSFR*NCTAVFWNSPFSPS Trigger: GGAGGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTATGTGGCCGCGTCAGAGGGCTCTATCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGAGCTCCCCTCCTAGGGTTTaGATGGCTGCTTGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSDLSASLDLGPGRHSQSSPPRV*MAAWSS Trigger: TGAGCTCCAAGCAGCCATCAAAACCCTAGGAGGGGA...GCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAAGCTCAGGGTGTGGTTaGAGCTCCTCCCCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GQSIPSSSSTWVGGLTVPSSGCG*SSSPKA Trigger: GGCTTTTGGGGAGGAGCTCAAACCACACCCTGAGCT...TGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCCTGCACAGCTGTGTTTaGGAACAGCCCTTTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KAQLPVHAGSALPGCLLSLHSCV*EQPFQS Trigger: GGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAG...GGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGGCTGCTCCATCCTCTGTCCTCCACAGCCAGGAAAGCTCAACTTCCCGTCCTGCACAGCTGTGTTTaGGAACAGCCCTTTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLLHPLSSTARKAQLPVLHSCV*EQPFQS Trigger: GGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAG...GACGGGAAGTTGAGCTTTCCTGGCTGTGGAGGACAGAGGATGGAGCAGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS GCA 90 bp | TTTGGAACATCAGGAAATTTTCTCTGCACGGCTGCATGGAAGAGGTaGAGGAGTGCGGTGCAGTCCTTGCCCCCATTGAAGCCCACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FGTSGNFLCTAAWKR*RSAVQSLPPLKPTQ Trigger: CTGCGTGGGCTTCAATGGGGGCAAGGACTGCACCGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAGAAAATTTCCTGATGTTCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CCA 90 bp | GCGGCCACATACAACTCCTTCAGGTGGAACTGCACAGCTGTGTTTTaGAACAGCCCTTTCAGTCCCTCCAAAACTCGTCGCAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AATYNSFRWNCTAVF*NSPFSPSKTRRRSS Trigger: GGAGCTTCTGCGACGAGTTTTGGAGGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTATGTGGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | GGGCAGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCACTGCACAGCTGTGTTTaGGAACAGCCCTTTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQSIPSSSSTWVGGLTVPLHSCV*EQPFQS Trigger: GGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAG...TGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTCCATTCTGTCCTCTCTGCACAAAAGTTGGGAGGAACATGGCTTTTCTAGTGCGGTGCAGTCCTaGCCCCCATTGAAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: ACSILSSLHKSWEEHGFSSAVQS*PPLKPT Trigger: CGTGGGCTTCAATGGGGGCAAGGACTGCACCGCACT...AGAAAAGCCATGTTCCTCCCAACTTTTGTGCAGAGAGGACAGAATGGAGCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
||
| CDS CCA 90 bp | CCCTTTCAGTCCCTCCAAAACTCGTCGCAGAAGCTCCGGAATTCCTaGGAAGAGGTAGACATTTCGGACAGAGACCAGCGGGAATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFQSLQNSSQKLRNS*EEVDISDRDQRESE Trigger: TTCAGATTCCCGCTGGTCTCTGTCCGAAATGTCTACCTCTTCCCAGGAATTCCGGAGCTTCTGCGACGAGTTTTGGAGGGACTGAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AAAACAAAGGCTCTAGGGTCTAGCAAAAGAAGGTTCTGGGCCTCTGAGCAGGCTAGCTCAGGGTGTGGTTaGAGCTCCTCCCCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTKALGSSKRRFWASEQASSGCG*SSSPKA Trigger: GGCTTTTGGGGAGGAGCTCAAACCACACCCTGAGCT...AGCCTGCTCAGAGGCCCAGAACCTTCTTTTGCTAGACCCTAGAGCCTTTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCCAGAGCTGGAGATTATACCTCTaGATGGTGTCCTGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSDLSASLDLGPGRHSQSWRLYL*MVSCRN Trigger: GTTTCTGCAGGACACCATCAAGAGGTATAATCTCCA...GCTCTGGCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGTTCAGATCTGTCAGCCTCCCTTGACCTCGGACCAGGAAGGCACAGCTGGAGATTATACCTCTaGATGGTGTCCTGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TASSDLSASLDLGPGRHSWRLYL*MVSCRN Trigger: GTTTCTGCAGGACACCATCAAGAGGTATAATCTCCA...GCTGTGCCTTCCTGGTCCGAGGTCAAGGGAGGCTGACAGATCTGAACTGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGATACACCAGCAACAAAGAAGGATGTAGGCGACTTCCTTCAGGGTTCGAGCTCAGGGTGTGGTTaGAGCTCCTCCCCAAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLDTPATKKDVGDFLQGSSSGCG*SSSPKA Trigger: GGCTTTTGGGGAGGAGCTCAAACCACACCCTGAGCT...CGAACCCTGAAGGAAGTCGCCTACATCCTTCTTTGTTGCTGGTGTATCAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCAACTTCCCGTCCATGCAGGCAGTGCTCTGCCTGGTTGCCTCCTCTCCGGATCTGGAGAGGTTTaGGAACATCAGGAAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAQLPVHAGSALPGCLLSGSGEV*EHQEIF Trigger: GAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCC...GGAGAGGAGGCAACCAGGCAGAGCACTGCCTGCATGGACGGGAAGTTGAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACATGACAGGTTTTGATGGCTGCTaGGAGCTCAGGGTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PEQQAPTMGCEVHFTDMTGFDGC*ELRVWF Trigger: AAACCACACCCTGAGCTCCAAGCAGCCATCAAAACC...TGTCATGTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | GGATGGCGCATGAACAAGTTGATGTATACGCATGTGCACAGGCTGCTAACAGTTTCCCCTCCTAGGGTTTaGATGGCTGCTTGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GWRMNKLMYTHVHRLLTVSPPRV*MAAWSS Trigger: TGAGCTCCAAGCAGCCATCAAAACCCTAGGAGGGGA...AACTGTTAGCAGCCTGTGCACATGCGTATACATCAACTTGTTCATGCGCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| CDS-3UTR CAA 90 bp | AGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGTGGGCTCACTGTGCCAATTTTCCCCTCCTAGGGTTTaGATGGCTGCTTGGAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPFLVLQVRGLVGSLCQFSPPRV*MAAWSS Trigger: TGAGCTCCAAGCAGCCATCAAAACCCTAGGAGGGGA...AAATTGGCACAGTGAGCCCACCAACCCACGTACTTGAAGAACTAGGAATGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | ATTACCAGGCATTTCAGGGGCAGTCCATTCCTAGTTCTTCAAGTACGTGGGTTGGGTTTTGATGGCTGCTaGGAGCTCAGGGTGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITRHFRGSPFLVLQVRGLGFDGC*ELRVWF Trigger: AAACCACACCCTGAGCTCCAAGCAGCCATCAAAACC...CAACCCACGTACTTGAAGAACTAGGAATGGACTGCCCCTGAAATGCCTGGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050398.11 ENSMUST00000129308.9 |
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| CDS-3UTR CAA 90 bp | GCACAGCCAGAGCAACAGGCACCAACAATGGGGTGTGAGGTACACTTTACTGACGGATCTGGAGAGGTTTaGGAACATCAGGAAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQPEQQAPTMGCEVHFTDGSGEV*EHQEIF Trigger: GAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCC...GTCAGTAAAGTGTACCTCACACCCCATTGTTGGTGCCTGTTGCTCTGGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS-3UTR CAA 90 bp | ATAGATCAGGATGGTCTCAAAATCTTCCAGCCTCCGCCTCCCAAGTGCTGGAATGGATCTGGAGAGGTTTaGGAACATCAGGAAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IDQDGLKIFQPPPPKCWNGSGEV*EHQEIF Trigger: GAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCC...ATTCCAGCACTTGGGAGGCGGAGGCTGGAAGATTTTGAGACCATCCTGATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| CDS-3UTR CAA 90 bp | GCTTGCTCCATTCTGTCCTCTCTGCACAAAAGTTGGGAGGAACATGGCTTTTCTTGGAGATTATACCTCTaGATGGTGTCCTGCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ACSILSSLHKSWEEHGFSWRLYL*MVSCRN Trigger: GTTTCTGCAGGACACCATCAAGAGGTATAATCTCCA...AGAAAAGCCATGTTCCTCCCAACTTTTGTGCAGAGAGGACAGAATGGAGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050398.11 |
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| CDS TCA 72 bp | CTGAGCCTCCGACAGGATGGGGGCGATAGAGCCCTCTaGCGCGGCCACATACAACTCCTTCAGGTGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLRQDGGDRAL*RGHIQLLQVEL Trigger: CAGTTCCACCTGAAGGAGTTGTATGTGGCCGCGTCAGAGGGCTCTATCGCCCCCATCCTGTCGGAGGCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 72 bp | CTCCTGGGCTCAGGCACTTCAGGGCCGGATTCTGCGTaGTGTTTTCCCGACTCCCCAGGGATGTGTACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLGSGTSGPDSA*CFPDSPGMCTL Trigger: GAGGGTACACATCCCTGGGGAGTCGGGAAAACACAACGCAGAATCCGGCCCTGAAGTGCCTGAGCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 90 bp | GAGGGCACCATCGACAGCTTCTCCCAACCCTCCCCTCCTAGGGTTTaGATGGCTGCTTGGAGCTCAGGGTGTGGTTTGAGCTCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGTIDSFSQPSPPRV*MAAWSSGCGLSSSP Trigger: TGGGGAGGAGCTCAAACCACACCCTGAGCTCCAAGCAGCCATCAAAACCCTAGGAGGGGAGGGTTGGGAGAAGCTGTCGATGGTGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 |
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| CDS TCA 72 bp | AGCCTTCTCAACAGCATCGGGCTGGTAGGGGACCAGTaGTCCTTGGGGCAGACGTGCAGTCAGATAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLNSIGLVGDQ*SLGQTCSQIGQ Trigger: CTGGCCTATCTGACTGCACGTCTGCCCCAAGGATCACTGGTCCCCTACCAGCCCGATGCTGTTGAGAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CCA 72 bp | GCTACTTCATCAGGCACAACAGAGACTCGGCAAACCTaGACCCCCAGGGAGCGCAGGGTCCGGCAAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATSSGTTETRQT*TPRERRVRQRK Trigger: CTTTCTTTGCCGGACCCTGCGCTCCCTGGGGGTCCAGGTTTGCCGAGTCTCTGTTGTGCCTGATGAAGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 ENSMUST00000162701.2 |
||
| CDS CCA 72 bp | GCTGGGAGAGATGGTACTGAGCCAGGGCAGTCTCGATaGTCTGTAGGGCACCTGCTACCTTCTTCCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AGRDGTEPGQSR*SVGHLLPSSPD Trigger: GTCTGGGGAAGAAGGTAGCAGGTGCCCTACAGACCATCGAGACTGCCCTGGCTCAGTACCATCTCTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS TCA 72 bp | CCCCGCGGTGAGGACGTGAGTGAAGCGCCTGGAGAATaGGTTGACCTCGGATGCAATGGTGGCTACTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PRGEDVSEAPGE*VDLGCNGGYFI Trigger: GATGAAGTAGCCACCATTGCATCCGAGGTCAACTCATTCTCCAGGCGCTTCACTCACGTCCTCACCGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 ENSMUST00000162701.2 |
||
| CDS TCA 72 bp | GTAGGTCCAGTCCAGCAGCGGGTTGATTCTCATGAATaGAGGCCAGCCAGGGTCGGTGGGACTGAAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VGPVQQRVDSHE*RPARVGGTEMA Trigger: AGCCATTTCAGTCCCACCGACCCTGGCTGGCCTTCATTCATGAGAATCAACCCGCTGCTGGACTGGACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CAA 72 bp | ATCGACAGCTTCTCCCAACCCTCCCCTCCTAGGGTTTaGATGGCTGCTTGGAGCTCAGGGTGTGGTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: IDSFSQPSPPRV*MAAWSSGCGLS Trigger: GCTCAAACCACACCCTGAGCTCCAAGCAGCCATCAAAACCCTAGGAGGGGAGGGTTGGGAGAAGCTGTCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 |
||
| CDS GCA 72 bp | TCAGGAAATTTTCTCTGCACGGCTGCATGGAAGAGGTaGAGGAGTGCGGTGCAGTCCTTGCCCCCATTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGNFLCTAAWKR*RSAVQSLPPLK Trigger: CTTCAATGGGGGCAAGGACTGCACCGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAGAAAATTTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CCA 72 bp | TCCCTCCAAAACTCGTCGCAGAAGCTCCGGAATTCCTaGGAAGAGGTAGACATTTCGGACAGAGACCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLQNSSQKLRNS*EEVDISDRDQR Trigger: CCGCTGGTCTCTGTCCGAAATGTCTACCTCTTCCCAGGAATTCCGGAGCTTCTGCGACGAGTTTTGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 |
||
| CDS CCA 72 bp | GAGCCCTCTGACGCGGCCACATACAACTCCTTCAGGTaGAACTGCACAGCTGTGTTTTGGAACAGCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EPSDAATYNSFR*NCTAVFWNSPF Trigger: GAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTATGTGGCCGCGTCAGAGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CAA 72 bp | ACCTTCTTCCCCAGACAAGAGCCTGACTCCGCGAGTTaGTACACAGCCTCACCAGCCTTCTCAACAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: TFFPRQEPDSAS*YTASPAFSTAS Trigger: CGATGCTGTTGAGAAGGCTGGTGAGGCTGTGTACAAACTCGCGGAGTCAGGCTCTTGTCTGGGGAAGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CAA 90 bp | CGCGGCCACATACAACTCCTTCAGGTGGAACTGCACAGCTGTGTTTaGGAACAGCCCTTTCAGTCCCTCCAAAACTCGTCGCAGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGHIQLLQVELHSCV*EQPFQSLQNSSQKL Trigger: GAGCTTCTGCGACGAGTTTTGGAGGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTATGTGGCCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS TCA 72 bp | AGAGGTAGACATTTCGGACAGAGACCAGCGGGAATCTaGAGGGGTGGCCGGTTCGAGGATCTGTACCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RGRHFGQRPAGI*RGGRFEDLYRN Trigger: ATTACGGTACAGATCCTCGAACCGGCCACCCCTTCAGATTCCCGCTGGTCTCTGTCCGAAATGTCTACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 |
||
| CDS GCA 72 bp | GACTCCCCAGGGATGTGTACCCTCTGTCATATAGGATaGAGTATGGGACAAACAGCTGCCGCAGAAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSPGMCTLCHIG*SMGQTAAAETP Trigger: GGGAGTTTCTGCGGCAGCTGTTTGTCCCATACTGCATCCTATATGACAGAGGGTACACATCCCTGGGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
||
| CDS CCA 72 bp | TTTGGAACATCAGGAAATTTTCTCTGCACGGCTGCATaGAAGAGGTGCAGGAGTGCGGTGCAGTCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: FGTSGNFLCTAA*KRCRSAVQSLP Trigger: GGGCAAGGACTGCACCGCACTCCTGCACCTCTTCCATGCAGCCGTGCAGAGAAAATTTCCTGATGTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CCA 72 bp | TACAACTCCTTCAGGTGGAACTGCACAGCTGTGTTTTaGAACAGCCCTTTCAGTCCCTCCAAAACTCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: YNSFRWNCTAVF*NSPFSPSKTRR Trigger: GCGACGAGTTTTGGAGGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 90 bp | CAGGGAAGGGCGAGATGCTACGAATGTACAGGATCTGGAGAGGTTTaGGAACATCAGGAAATTTTCTCTGCACGGCTGCATGGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: QGRARCYECTGSGEV*EHQEIFSARLHGRG Trigger: ACCTCTTCCATGCAGCCGTGCAGAGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCCTGTACATTCGTAGCATCTCGCCCTTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS GCA 72 bp | CCTGCAGAAACTGTTCCAACTCAGGGAAGGGCGAGATaGTACGAATGTACAGGATCTGGAGAGGTTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PAETVPTQGRAR*YECTGSGEVLE Trigger: TTCCAAAACCTCTCCAGATCCTGTACATTCGTAGCATCTCGCCCTTCCCTGAGTTGGAACAGTTTCTGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 72 bp | ATACAACTCCTTCAGGTGGAACTGCACAGCTGTGTTTaGGAACAGCCCTTTCAGTCCCTCCAAAACTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: IQLLQVELHSCV*EQPFQSLQNSS Trigger: CGACGAGTTTTGGAGGGACTGAAAGGGCTGTTCCAAAACACAGCTGTGCAGTTCCACCTGAAGGAGTTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 72 bp | GCGCAGGGTCCGGCAAAGAAAGTAAGTGTTGGTATCTaGCGTGTGTCCCTTAAGGATCTCATCTCCAACAAT | + |
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Preference number: 6 (lower is better) Translates to: AQGPAKKVSVGI*RVSLKDLISNN Trigger: ATTGTTGGAGATGAGATCCTTAAGGGACACACGCAAGATACCAACACTTACTTTCTTTGCCGGACCCTGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000107429.10 ENSMUST00000129308.9 ENSMUST00000162701.2 |
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| CDS CCA 72 bp | CGAGATGCTACGAATGTACAGGATCTGGAGAGGTTTTaGAACATCAGGAAATTTTCTCTGCACGGCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: RDATNVQDLERF*NIRKFSLHGCM Trigger: CATGCAGCCGTGCAGAGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCCTGTACATTCGTAGCATCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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| CDS CAA 72 bp | GCGAGATGCTACGAATGTACAGGATCTGGAGAGGTTTaGGAACATCAGGAAATTTTCTCTGCACGGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: ARCYECTGSGEV*EHQEIFSARLH Trigger: ATGCAGCCGTGCAGAGAAAATTTCCTGATGTTCCAAAACCTCTCCAGATCCTGTACATTCGTAGCATCTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050398.11 ENSMUST00000107426.8 ENSMUST00000129308.9 |
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