Pregenerated sensors for FLACC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047528Ensembl transcript IDs: ENSMUST00000055313.14, ENSMUST00000188772.7, ENSMUST00000191252.7, ENSMUST00000191565.7
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTTACCTACGATaGTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATA | + |
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Preference number: 1 (lower is better) Translates to: PGQCRSAPGAVSYLR*LLFVAVVFRNVRLI Trigger: TATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR GCA 90 bp | AAAAATGACAAAAGTACAGAACAACTCAAGAGCTCAGCCTTCCCGTaGGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: KNDKSTEQLKSSAFP*VSPEESVASSQGSV Trigger: GACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| 3UTR GCA 90 bp | GCATTGGAAAAGGTTTGTGTTCAGGGTCTCCAGAACAGTAGCTTGTaGCCGCAACTCAGCCTCCAAGATCTCTTTGGATTTTCTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: ALEKVCVQGLQNSSL*PQLSLQDLFGFSQL Trigger: GAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR GCA 90 bp | AACTCAGCCTCCAAGATCTCTTTGGATTTTCTCAGCTCCTGTATTTaGAGGATGTCTTCATCATGTTGTCTTAGGAGCTCCTCTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NSASKISLDFLSSCI*RMSSSCCLRSSSFS Trigger: AGAGAAAGAGGAGCTCCTAAGACAACATGATGAAGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CCA 90 bp | TTCTCTAGATTTGCCGCAATAGTTTTCTGTCTCTCGAGTTCTTTCTaGCATTGGAAAAGGTTTGTGTTCAGGGTCTCCAGAACAGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: FSRFAAIVFCLSSSF*HWKRFVFRVSRTVA Trigger: AGCTACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR GCA 90 bp | ATTCGGCCTTTCGTCTCAGCCACTTGTCTTCCATTTCCTCGTAAATaGTATCCTGAAACACATGGAACATACTCTTCAGATACTTATATT | + |
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Preference number: 1 (lower is better) Translates to: IRPFVSATCLPFPRK*YPETHGTYSSDTYI Trigger: AATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGGCTGAGACGAAAGGCCGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR TCA 90 bp | AGAAATGATATCAGTCCTGGAAAATTTGACTTTGCTCAAGACATCTaGTTCCAAGTGCTTTTTCCTGTTGAACATCTCATCTCCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RNDISPGKFDFAQDI*FQVLFPVEHLISQG Trigger: ACCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTACATACATGTTGGGACTaGCAGATGAGGACTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EESVASSQGSVAQPQEQLHTCWD*QMRTSQ Trigger: CTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATG...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR-3UTR GCA 90 bp | CCCGCTCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTAGTTTCAGGGCAGACTaGTGGTCTCTGTTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: PAPSSHLSPIRPFVSATCSFRAD*WSLFIC Trigger: ACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACT...ACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CAA 90 bp | GGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTTACCTACGATGCTaGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACAT | + |
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Preference number: 2 (lower is better) Translates to: GQCRSAPGAVSYLRC*LFVAVVFRNVRLIH Trigger: ATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR-3UTR GCA 90 bp | CCGCTCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTCTCGGTTTCAAACTTCTaGTTCATGTTGGAACAGCGG | + |
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Preference number: 2 (lower is better) Translates to: PLHLLIFLPFGLSSQPLVSVSNF*FMLEQR Trigger: CCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGA...GACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CCA 90 bp | CCGCTCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTCACTTCTGCTTCATGTTaGAACAGCGGAGATCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLHLLIFLPFGLSSQPLVTSASC*NSGDPD Trigger: ATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGT...GACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CAA 90 bp | GTCTCTTTGAGTTCCCTGCTCTCGGTTTCAAACTTCTGCTTCATGTaGGAACAGCGGAGATCCAGATCTTTGGAGAGCAGTTTCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VSLSSLLSVSNFCFM*EQRRSRSLESSFRA Trigger: TGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR GCA 90 bp | TCAGCCTCCAAGATCTCTTTGGATTTTCTCAGCTCCTGTATTTGCAGGATGTCTGGCCAAGGCCTTTTCTaGCTTCAGGGCCTCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SASKISLDFLSSCICRMSGQGLF*LQGLLV Trigger: TACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCC...AGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTCTTCCTTCAGGGCAGACTGCTaGTCTCTGTTCATCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: SIFSSFSHSAFRLSHLSSFRADC*SLFICS Trigger: AGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAA...GGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR TCA 90 bp | TATCTAGTTTCTCTTCGGCCAAGGCCTTTTCTGCCTTCAGGGCCTCCTTGTAGTATCTCCCAAGGTGACTaGTATCTGTTCTCGATTTCG | + |
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Preference number: 2 (lower is better) Translates to: YLVSLRPRPFLPSGPPCSISQGD*YLFSIS Trigger: CGAAATCGAGAACAGATATCAGTCACCTTGGGAGAT...ACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR TCA 90 bp | CCGCTCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTCTCAGCAATTTGCTCCTaGAGGTCAGAAATGATATCA | + |
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Preference number: 2 (lower is better) Translates to: PLHLLIFLPFGLSSQPLVSAICS*RSEMIS Trigger: TGATATCATTTCTGACCTTCAGGAGCAAATTGCTGA...GACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGAACAATTTCTCTAGATTTGCCGCAATAGTTTTCTGTCTCTCGAGTTCTGGAGATCCAGATCTTTaGAGAGCAGTTTCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VWNNFSRFAAIVFCLSSSGDPDL*RAVSGQ Trigger: CTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCC...AGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR TCA 90 bp | TGCTATCCTGAAACACATGGAACATACTCTTCAGATACTTATATTCCTTGCTCAGTTCTCGATTTCGAATaGGTGTATAGCCAGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: CYPETHGTYSSDTYIPCSVLDFE*VYSQVT Trigger: TGTCACCTGGCTATACACTCATTCGAAATCGAGAAC...TGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR TCA 90 bp | AACAATTTCTCTAGATTTGCCGCAATAGTTTTCTGTCTCTCGAGTTCTTTCTGGCTTCTCAGAAACTTCTaGAGTTTCCTCATATGTGGT | + |
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Preference number: 2 (lower is better) Translates to: NNFSRFAAIVFCLSSSFWLLRNF*SFLICG Trigger: ACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAG...CCAGAAAGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR TCA 90 bp | ACATACTCTTCAGATACTTATATTCCTTGCTCATCTTATCTAGTTTCTCTTCGGAGTGCTTTTTCCTGTTaGACATCTCATCTCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TYSSDTYIPCSSYLVSLRSAFSC*TSHLPR Trigger: CCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACT...CCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR GCA 90 bp | CATTTCCTCGTAAATGCTATCCTGAAACACATGGAACATACTCTTCAGATACTTCATCTGTTCTATTATTaGCATCAACTCAGCAATTTG | + |
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Preference number: 2 (lower is better) Translates to: HFLVNAILKHMEHTLQILHLFYY*HQLSNL Trigger: CAAATTGCTGAGTTGATGGCAATAATAGAACAGATG...AAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CAA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGATGCTTGCTTTTTGTaGCTGTTGTGTTCAGGAACG | + |
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Preference number: 3 (lower is better) Translates to: VSPEESVASSQGSVAQPQDACFL*LLCSGT Trigger: CGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR GCA 72 bp | GCTCAGCCCCAGGAGCAGTTAGTTACCTACGATGCTTaGTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: AQPQEQLVTYDA*FLLLLCSGTSD Trigger: GTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR GCA 72 bp | TGTCGCTCAGCCCCAGGAGCAGTTAGTTACCTACGATaGTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTC | + |
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Preference number: 3 (lower is better) Translates to: CRSAPGAVSYLR*LLFVAVVFRNV Trigger: GACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR-3UTR CAA 90 bp | TATCTAGTTTCTCTTCGGCCAAGGCCTTTTCTGCCTTCAGGGCCTCCTTGTAGTAACTTCTGCTTCATGTaGGAACAGCGGAGATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: YLVSLRPRPFLPSGPPCSNFCFM*EQRRSR Trigger: TCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTT...ACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR GCA 72 bp | AAGGTTTGTGTTCAGGGTCTCCAGAACAGTAGCTTGTaGCCGCAACTCAGCCTCCAAGATCTCTTTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: KVCVQGLQNSSL*PQLSLQDLFGF Trigger: AAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTGGAGACCCTGAACACAAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CCA 72 bp | GTTCCCTGCTCTCGGTTTCAAACTTCTGCTTCATGTTaGAACAGCGGAGATCCAGATCTTTGGAGAGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: VPCSRFQTSASC*NSGDPDLWRAV Trigger: AACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CAA 90 bp | CATTTTTGTTGTAGCAGGATCTTTTCCCGCTCCATCTTCTCATCTTTCTCCCATCGGAGATCCAGATCTTaGGAGAGCAGTTTCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: HFCCSRIFSRSIFSSFSHRRSRS*ESSFRA Trigger: TGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCG...ATGGGAGAAAGATGAGAAGATGGAGCGGGAAAAGATCCTGCTACAACAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR GCA 72 bp | GTCTCTTTGAGTTCCCTGCTCTCGGTTTCAAACTTCTaGTTCATGTTGGAACAGCGGAGATCCAGATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: VSLSSLLSVSNF*FMLEQRRSRSL Trigger: CAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACTCAAAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CCA 72 bp | TGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTaGGACTGGCAGATGAGGACTTCTCAGAAACTTCTG | + |
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Preference number: 3 (lower is better) Translates to: CCCVQERQTHTC*DWQMRTSQKLL Trigger: CAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR GCA 72 bp | AGATCCAGATCTTTGGAGAGCAGTTTCAGGGCAGACTaGTGGTCTCTGTTCATCTGTTCTATTATTGCCATC | + |
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Preference number: 3 (lower is better) Translates to: RSRSLESSFRAD*WSLFICSIIAI Trigger: GATGGCAATAATAGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CCA 72 bp | TGTGTTCAGGAACGTCAGACTCATACATGTTGGGACTaGCAGATGAGGACTTCTCAGAAACTTCTGAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: CVQERQTHTCWD*QMRTSQKLLKF Trigger: AAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
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| 3UTR GCA 72 bp | TCTGAAGTTTCCTCATATGTGGTTGTGGTTAACATCTaGCTGAGGCAGTTATTTTCTTCTGTCGGGGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: SEVSSYVVVVNI*LRQLFSSVGVF Trigger: AAAGACCCCGACAGAAGAAAATAACTGCCTCAGGCAGATGTTAACCACAACCACATATGAGGAAACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR CCA 72 bp | GCAATAGTTTTCTGTCTCTCGAGTTCTTTCTGGCATTaGAAAAGGTTTGTGTTCAGGGTCTCCAGAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: AIVFCLSSSFWH*KRFVFRVSRTV Trigger: TACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR TCA 72 bp | CTTTTTCCTGTTGAACATCTCATCTCCCAAGGTGACTaGTATCTGTTCTCGATTTCGAATGAGTGTATAGCC | + |
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Preference number: 3 (lower is better) Translates to: LFPVEHLISQGD*YLFSISNECIA Trigger: GGCTATACACTCATTCGAAATCGAGAACAGATATCAGTCACCTTGGGAGATGAGATGTTCAACAGGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CAA 90 bp | GTCTGGAACAATTTCTCTAGATTTGCCGCAATAGTTTTCTGTCTCTCGAGTTCTAAGTGCTTTTTCCTGTaGAACATCTCATCTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: VWNNFSRFAAIVFCLSSSKCFFL*NISSPK Trigger: CTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTT...AGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| 3UTR-3UTR CAA 90 bp | AATGCTATCCTGAAACACATGGAACATACTCTTCAGATACTTATATTCCTTGCTCTGGAAAATTTGACTTaGCTCAAGACATCTGATTCC | + |
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Preference number: 3 (lower is better) Translates to: NAILKHMEHTLQILIFLALENLT*LKTSDS Trigger: GGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAG...AGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| CDS-3UTR TCA 90 bp | CCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGGCTCTCTGTGTTTCCTaGCTGGACCTTGTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PEESVASSQGSVAQPQEQALCVS*LDLVPW Trigger: CCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGC...CTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR TCA 90 bp | GTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCGCTCTCTGTGTTTCCTaGCTGGACCTTGTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VRLSRRVRSFLPGQCRSAALCVS*LDLVPW Trigger: CCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGC...GGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR GCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGGGCCAAGGCCTTTTCTaGCTTCAGGGCCTCCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQGQGLF*LQGLLV Trigger: TACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCC...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR TCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGTCGAGCTCCTCTCTGTaGGTCTCTTTGAGTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQSSSSL*VSLSSL Trigger: CAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGA...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGACAGAACAGTAGCTTGTaGCCGCAACTCAGCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LSRRVRSFLPGQCRSAPGQNSSL*PQLSLQ Trigger: TTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTG...TCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR CCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGTCTGTGTTTCCTGACTaGACCTTGTCCCTTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQSVFPD*TLSLGE Trigger: TTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGA...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR CCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGGGAGATCCAGATCTTTaGAGAGCAGTTTCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQGDPDL*RAVSGQ Trigger: CTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCC...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGATTGGTTGTCCCAATTTaGAGCAGTCACAGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LSRRVRSFLPGQCRSAPGLVVPI*SSHSRY Trigger: GTACCTGCTGTGACTGCTGCAAATTGGGACAACCAA...TCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
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| CDS-3UTR GCA 90 bp | CCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCACAGAAGGTGCTTTGCTaGTCTCTGTGTTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVRLSRRVRSFLPGQCRSQKVLC*SLCFLT Trigger: AGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTG...TGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | TGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCAGTTTCAGGGCAGACTaGTGGTCTCTGTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CVSPEESVASSQGSVAQPSFRAD*WSLFIC Trigger: ACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACT...GGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGGTAGATTTTCCTGGTTaGGACAGGAGTGAGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PEESVASSQGSVAQPQEQVDFPG*DRSELC Trigger: ACACAACTCACTCCTGTCCCAACCAGGAAAATCTAC...CTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGACTGGACCTTGTCCCTTaGGGAAACAGTAGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSRRVRSFLPGQCRSAPGLDLVP*GNSRFS Trigger: GGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAG...TCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | GTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCTTCAGGGCAGACTGCTaGTCTCTGTTCATCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLSRRVRSFLPGQCRSAFRADC*SLFICS Trigger: AGAACAGATGAACAGAGACCAGCAGTCTGCCCTGAA...GGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | TGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCATACATGTTGGGACTaGCAGATGAGGACTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CVSPEESVASSQGSVAQPHTCWD*QMRTSQ Trigger: CTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATG...GGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGAGTGCTTTTTCCTGTTaGACATCTCATCTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQSAFSC*TSHLPR Trigger: CCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACT...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTTTGGTTGTCCCAATTTaGAGCAGTCACAGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSLVVPI*SSHSRY Trigger: GTACCTGCTGTGACTGCTGCAAATTGGGACAACCAA...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTACAGAAGGTGCTTTGCTaGTCTCTGTGTTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: EESVASSQGSVAQPQEQLQKVLC*SLCFLT Trigger: AGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTG...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTAGTTTCAGGGCAGACTaGTGGTCTCTGTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSSFRAD*WSLFIC Trigger: ACAGATGAACAGAGACCAGCAGTCTGCCCTGAAACT...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGTCGGTTTCAAACTTCTaGTTCATGTTGGAACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPEESVASSQGSVAQPQSVSNF*FMLEQR Trigger: CCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGA...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAACTTCTGCTTCATGTTaGAACAGCGGAGATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVRLSRRVRSFLPGQCRSTSASC*NSGDPD Trigger: ATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGT...TGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTGAGTGTATAGCCAGGTaGCACTTGAATCACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSECIAR*HLNHFR Trigger: TCTGAAGTGATTCAAGTGTCACCTGGCTATACACTC...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTTCTCGATTTCGAATaGGTGTATAGCCAGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EESVASSQGSVAQPQEQLVLDFE*VYSQVT Trigger: TGTCACCTGGCTATACACTCATTCGAAATCGAGAAC...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTATCTCCCAAGGTGACTaGTATCTGTTCTCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FPCVSPEESVASSQGSVAISQGD*YLFSIS Trigger: CGAAATCGAGAACAGATATCAGTCACCTTGGGAGAT...AGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGTCAGCAATTTGCTCCTaGAGGTCAGAAATGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQSAICS*RSEMIS Trigger: TGATATCATTTCTGACCTTCAGGAGCAAATTGCTGA...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGATCAGCAATTTGCTCCTaGAGGTCAGAAATGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRRVRSFLPGQCRSAPGSAICS*RSEMIS Trigger: TGATATCATTTCTGACCTTCAGGAGCAAATTGCTGA...TCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAAATCACTTCAGAAGGTaGTTTGCTGCTCTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EESVASSQGSVAQPQEQLNHFRR*FAALCV Trigger: AACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATT...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTAATCACTTCAGAAGGTaGTTTGCTGCTCTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSNHFRR*FAALCV Trigger: AACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATT...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | CCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCACCATTTCCTCGTAAATaGTATCCTGAAACACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVRLSRRVRSFLPGQCRSPFPRK*YPETHG Trigger: TCCATGTGTTTCAGGATAGCATTTACGAGGAAATGG...TGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR GCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGGTTGTGGTTAACATCTaGCTGAGGCAGTTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQVVVNI*LRQLFS Trigger: AGAAAATAACTGCCTCAGGCAGATGTTAACCACAAC...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTTACCTACGATGCTGTAGATTTTCCTGGTTaGGACAGGAGTGAGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSQGSVAQPQEQLVTYDAVDFPG*DRSELC Trigger: ACACAACTCACTCCTGTCCCAACCAGGAAAATCTAC...AGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTCCTCCAAGATCTCTTTaGATTTTCTCAGCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSPPRSL*IFSAPV Trigger: TACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGG...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGAGTTCTTTCTGGCATTaGAAAAGGTTTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCVSPEESVASSQGSVAQSSFWH*KRFVFR Trigger: CCTGAACACAAACCTTTTCCAATGCCAGAAAGAACT...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAAGTTCTTTCTGGCATTaGAAAAGGTTTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRLSRRVRSFLPGQCRSSSFWH*KRFVFR Trigger: CCTGAACACAAACCTTTTCCAATGCCAGAAAGAACT...TGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | TGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCAAGTTTCCTCATATGTaGTTGTGGTTAACATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CVSPEESVASSQGSVAQPKFPHM*LWLTSA Trigger: GGCAGATGTTAACCACAACCACATATGAGGAAACTT...GGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR TCA 90 bp | TATCTAGTTTCTCTTCGGCCAAGGCCTTTTCTGCCTTCAGGGCCTCCTTGTAGTGCTCTCTGTGTTTCCTaGCTGGACCTTGTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YLVSLRPRPFLPSGPPCSALCVS*LDLVPW Trigger: CCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGC...ACTACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCCGAAGAGAAACTAGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR TCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTACTTCTCAGAAACTTCTaGAGTTTCCTCATATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EESVASSQGSVAQPQEQLLLRNF*SFLICG Trigger: ACCACATATGAGGAAACTTCAGAAGTTTCTGAGAAG...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGTCAGCAAGCTTTGTCTaGAACAATTTCTCTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSPEESVASSQGSVAQPQSASFV*NNFSRF Trigger: AAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGA...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| 3UTR CAA 72 bp | TTCTGCTTCATGTTGGAACAGCGGAGATCCAGATCTTaGGAGAGCAGTTTCAGGGCAGACTGCTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCFMLEQRRSRS*ESSFRADCWSL Trigger: CAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTCATCTGTTCTATTATTaGCATCAACTCAGCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSHLFYY*HQLSNL Trigger: CAAATTGCTGAGTTGATGGCAATAATAGAACAGATG...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CCA 90 bp | CCCGCTCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTGTAGATTTTCCTGGTTaGGACAGGAGTGAGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPSSHLSPIRPFVSATCVDFPG*DRSELC Trigger: ACACAACTCACTCCTGTCCCAACCAGGAAAATCTAC...ACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGAGCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CCA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTATCAGCAAGCTTTGTCTaGAACAATTTCTCTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EESVASSQGSVAQPQEQLSASFV*NNFSRF Trigger: AAATCTAGAGAAATTGTTCCAGACAAAGCTTGCTGA...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| 3UTR CAA 72 bp | CGCTCAGCCCCAGGAGCAGTTAGTTACCTACGATGCTaGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSAPGAVSYLRC*LFVAVVFRNVR Trigger: TCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGGGGCTGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR GCA 90 bp | TCCATCTTCTCATCTTTCTCCCATTCGGCCTTTCGTCTCAGCCACTTGTCTTCCTTGGTTGTCCCAATTTaGAGCAGTCACAGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SIFSSFSHSAFRLSHLSSLVVPI*SSHSRY Trigger: GTACCTGCTGTGACTGCTGCAAATTGGGACAACCAA...GGAAGACAAGTGGCTGAGACGAAAGGCCGAATGGGAGAAAGATGAGAAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| 3UTR CAA 72 bp | AGTTCCCTGCTCTCGGTTTCAAACTTCTGCTTCATGTaGGAACAGCGGAGATCCAGATCTTTGGAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSVSNFCFM*EQRRSRSLESS Trigger: ACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGAGAGCAGGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| 3UTR CAA 72 bp | GTAGCTTGTGCCCGCAACTCAGCCTCCAAGATCTCTTaGGATTTTCTCAGCTCCTGTATTTGCAGGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VACARNSASKIS*DFLSSCICRMS Trigger: AGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGAGTTGCGGGCACAAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGGACTGGCCAAGGCCTTTTCTaGCTTCAGGGCCTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLFVAVVFRNVRLIHVGTGQGLF*LQGLLV Trigger: TACAAGGAGGCCCTGAAGGCAGAAAAGGCCTTGGCC...AGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR GCA 90 bp | CTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGGACCAGAACAGTAGCTTGTaGCCGCAACTCAGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAFCCCCVQERQTHTCWDQNSSL*PQLSLQ Trigger: TTGGAGGCTGAGTTGCGGGCACAAGCTACTGTTCTG...GTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGCAGTTAGTTACCTACGATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGTCTGTGTTTCCTGACTaGACCTTGTCCCTTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGAVSYLRCLLFVAVVFRSVFPD*TLSLGE Trigger: TTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGA...CCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGTAACTAACTGCTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR TCA 90 bp | GATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGTCGAGCTCCTCTCTGTaGGTCTCTTTGAGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DACFLLLLCSGTSDSYMLSSSSL*VSLSSL Trigger: CAGGGAACTCAAAGAGACTCACAGAGAGGAGCTCGA...CAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CCA 90 bp | TACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGTTTCCTCAGGAGATCCAGATCTTTaGAGAGCAGTTTCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YMLGLADEDFSETSEVSSGDPDL*RAVSGQ Trigger: CTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCC...TGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR TCA 90 bp | CAGACTCATACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGGAGTGTATAGCCAGGTaGCACTTGAATCACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTHTCWDWQMRTSQKLLKECIAR*HLNHFR Trigger: TCTGAAGTGATTCAAGTGTCACCTGGCTATACACTC...CTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR GCA 90 bp | AACTTCTGCTTCATGTTGGAACAGCGGAGATCCAGATCTTTGGAGAGCAGTTTCAAGAAGGTGCTTTGCTaGTCTCTGTGTTTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NFCFMLEQRRSRSLESSFKKVLC*SLCFLT Trigger: AGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTT...GAAACTGCTCTCCAAAGATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| 3UTR CAA 72 bp | TTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTaGGGACTGGCAGATGAGGACTTCTCAGAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLCSGTSDSYM*GLADEDFSETS Trigger: AGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR TCA 90 bp | TACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGTTTCCTCAGTTCTCGATTTCGAATaGGTGTATAGCCAGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YMLGLADEDFSETSEVSSVLDFE*VYSQVT Trigger: TGTCACCTGGCTATACACTCATTCGAAATCGAGAAC...TGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CCA 90 bp | GTCTGGAACAATTTCTCTAGATTTGCCGCAATAGTTTTCTGTCTCTCGAGTTCTTCTGTGTTTCCTGACTaGACCTTGTCCCTTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWNNFSRFAAIVFCLSSSSVFPD*TLSLGE Trigger: TTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGA...AGAACTCGAGAGACAGAAAACTATTGCGGCAAATCTAGAGAAATTGTTCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CCA 90 bp | CTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGGACACTTCTGCTTCATGTTaGAACAGCGGAGATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAFCCCCVQERQTHTCWDTSASC*NSGDPD Trigger: ATCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGT...GTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| 3UTR CAA 72 bp | CGCAATAGTTTTCTGTCTCTCGAGTTCTTTCTGGCATaGGAAAAGGTTTGTGTTCAGGGTCTCCAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNSFLSLEFFLA*EKVCVQGLQNS Trigger: ACTGTTCTGGAGACCCTGAACACAAACCTTTTCCAATGCCAGAAAGAACTCGAGAGACAGAAAACTATTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR TCA 90 bp | GATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGATCTCCCAAGGTGACTaGTATCTGTTCTCGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DACFLLLLCSGTSDSYMLISQGD*YLFSIS Trigger: CGAAATCGAGAACAGATATCAGTCACCTTGGGAGAT...CAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR TCA 90 bp | CTACGATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATAGTGCTTTTTCCTGTTaGACATCTCATCTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRCLLFVAVVFRNVRLIHSAFSC*TSHLPR Trigger: CCTTGGGAGATGAGATGTTCAACAGGAAAAAGCACT...ATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGGACTTCGGTTTCAAACTTCTaGTTCATGTTGGAACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFVAVVFRNVRLIHVGTSVSNF*FMLEQR Trigger: CCGCTGTTCCAACATGAAGCAGAAGTTTGAAACCGA...AGTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CCA 90 bp | CCACTTGTCTTCCATTTCCTCGTAAATGCTATCCTGAAACACATGGAACATACTCTGGACCTTGTCCCTTaGGGAAACAGTAGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLVFHFLVNAILKHMEHTLDLVP*GNSRFS Trigger: GGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAG...AGTATGTTCCATGTGTTTCAGGATAGCATTTACGAGGAAATGGAAGACAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CCA 90 bp | TACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGTTTCCTCACCTCCAAGATCTCTTTaGATTTTCTCAGCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YMLGLADEDFSETSEVSSPPRSL*IFSAPV Trigger: TACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGG...TGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR GCA 90 bp | TACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGTTTCCTCACCATTTCCTCGTAAATaGTATCCTGAAACACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YMLGLADEDFSETSEVSSPFPRK*YPETHG Trigger: TCCATGTGTTTCAGGATAGCATTTACGAGGAAATGG...TGAGGAAACTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| 3UTR CAA 72 bp | AACACATGGAACATACTCTTCAGATACTTATATTCCTaGCTCATCTTATCTAGTTTCTCTTCGGCCAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTWNILFRYLYS*LILSSFSSAKA Trigger: GGCCTTGGCCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR GCA 90 bp | GATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGCATCTGTTCTATTATTaGCATCAACTCAGCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: DACFLLLLCSGTSDSYMLHLFYY*HQLSNL Trigger: CAAATTGCTGAGTTGATGGCAATAATAGAACAGATG...CAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| 3UTR CAA 72 bp | AGGTCAGAAATGATATCAGTCCTGGAAAATTTGACTTaGCTCAAGACATCTGATTCCAAGTGCTTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSEMISVLENLT*LKTSDSKCFFL Trigger: CAGGAAAAAGCACTTGGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAGGACTGATATCATTTCTGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGCGGAGATCCAGATCTTaGGAGAGCAGTTTCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEESVASSQGSVAQPQEQRRSRS*ESSFRA Trigger: TGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCG...CTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCTTTCCTGACTGGACCTaGTCCCTTGGGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VRLSRRVRSFLPGQCRSAFPDWT*SLGETV Trigger: TACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAA...GGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCTCAGACTCATACATGTaGGGACTGGCAGATGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLSRRVRSFLPGQCRSASDSYM*GLADED Trigger: GTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGA...GGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGTTTGGTTGTCCCAATTaGCAGCAGTCACAGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PCVSPEESVASSQGSVAQFGCPN*QQSQQV Trigger: TACCTGCTGTGACTGCTGCAAATTGGGACAACCAAA...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | TTCCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTTTTCCTGACTGGACCTaGTCCCTTGGGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPCVSPEESVASSQGSVAFPDWT*SLGETV Trigger: TACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAA...AGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGACTTCAGAAGGTGCTTaGCTGCTCTCTGTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PCVSPEESVASSQGSVAQTSEGA*LLSVFP Trigger: AGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGT...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGAACTTCTGCTTCATGTaGGAACAGCGGAGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSPEESVASSQGSVAQPQNFCFM*EQRRSR Trigger: TCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTT...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGGGCATTGGAAAAGGTTaGTGTTCAGGGTCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCVSPEESVASSQGSVAQGIGKG*CSGSPE Trigger: TTCTGGAGACCCTGAACACAAACCTTTTCCAATGCC...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGCCTCCAAGATCTCTTaGGATTTTCTCAGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EESVASSQGSVAQPQEQLASKIS*DFLSSC Trigger: ACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGC...TAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGCAGCTTCAGCAAGCTTaGTCTGGAACAATTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PEESVASSQGSVAQPQEQQLQQA*SGTISL Trigger: TAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTG...CTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGTGGGACAGGAGTGAGTaGTGTTCTTTTGAAATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCVSPEESVASSQGSVAQWDRSE*CSFEIG Trigger: ACCAATTTCAAAAGAACACAACTCACTCCTGTCCCA...CTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGAAGTGCTTTTTCCTGTaGAACATCTCATCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPEESVASSQGSVAQPQKCFFL*NISSPK Trigger: CTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTT...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAAAGTGCTTTTTCCTGTaGAACATCTCATCTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVRLSRRVRSFLPGQCRSKCFFL*NISSPK Trigger: CTTGGGAGATGAGATGTTCAACAGGAAAAAGCACTT...TGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGTTCTTTCTGGCATaGGAAAAGGTTTGTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPEESVASSQGSVAQPQEFFLA*EKVCVQ Trigger: CTGAACACAAACCTTTTCCAATGCCAGAAAGAACTC...CTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | TTCCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTGATGCTTGCTTTTTGTaGCTGTTGTGTTCAGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: FPCVSPEESVASSQGSVADACFL*LLCSGT Trigger: CGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC...AGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | TTCCCGTGCGTCTCTCCAGAAGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCTGGAAAATTTGACTTaGCTCAAGACATCTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPCVSPEESVASSQGSVALENLT*LKTSDS Trigger: GGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAG...AGCGACACTGCCCTGGGAGGAAGCTACGGACTCTTCTGGAGAGACGCACGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCGTAGCTTCCTCCCAGGGCAGTGTCGCTCAGCCCCAGGAGCAGTTAGTGTCGGGGTCTTTATGTaGTACTTATGCTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVRSFLPGQCRSAPGAVSVGVFM*YLCFSS Trigger: TGAAGAAAAGCATAAGTACAACATAAAGACCCCGAC...ACTAACTGCTCCTGGGGCTGAGCGACACTGCCCTGGGAGGAAGCTACGGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GCGGAGATCCAGATCTTTGGAGAGCAGTTTCAGGGCAGACTGCTGGTCTCTGTTTGGGACAGGAGTGAGTaGTGTTCTTTTGAAATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AEIQIFGEQFQGRLLVSVWDRSE*CSFEIG Trigger: ACCAATTTCAAAAGAACACAACTCACTCCTGTCCCA...AACAGAGACCAGCAGTCTGCCCTGAAACTGCTCTCCAAAGATCTGGATCTCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTCCAAGATCTCTTTGGATTTTCTCAGCTCCTGTATTTGCAGGATGTCTTTTCCTGACTGGACCTaGTCCCTTGGGGAAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SASKISLDFLSSCICRMSFPDWT*SLGETV Trigger: TACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAA...AGACATCCTGCAAATACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CAA 90 bp | GAACGTCAGACTCATACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTAACTTCTGCTTCATGTaGGAACAGCGGAGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERQTHTCWDWQMRTSQKLNFCFM*EQRRSR Trigger: TCTGGATCTCCGCTGTTCCAACATGAAGCAGAAGTT...AAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTGACGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | ACCTACGATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACACTTCAGAAGGTGCTTaGCTGCTCTCTGTGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TYDACFLLLLCSGTSDSYTSEGA*LLSVFP Trigger: AGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGT...GTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | CTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGGACGCCTCCAAGATCTCTTaGGATTTTCTCAGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAFCCCCVQERQTHTCWDASKIS*DFLSSC Trigger: ACAGGAGCTGAGAAAATCCAAAGAGATCTTGGAGGC...GTCCCAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | CAGACTCATACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGTGGGACAGGAGTGAGTaGTGTTCTTTTGAAATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QTHTCWDWQMRTSQKLLKWDRSE*CSFEIG Trigger: ACCAATTTCAAAAGAACACAACTCACTCCTGTCCCA...CTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGAAAAATGACAAAAGTACAGAACAACTCAAGAGCTCAGCCTTCCCGTTTGGTTGTCCCAATTaGCAGCAGTCACAGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QIVKNDKSTEQLKSSAFPFGCPN*QQSQQV Trigger: TACCTGCTGTGACTGCTGCAAATTGGGACAACCAAA...CGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGAAAAATGACAAAAGTACAGAACAACTCAAGAGCTCAGCCTTCCCGGGCATTGGAAAAGGTTaGTGTTCAGGGTCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QIVKNDKSTEQLKSSAFPGIGKG*CSGSPE Trigger: TTCTGGAGACCCTGAACACAAACCTTTTCCAATGCC...CGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | ACCTACGATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACCAGCTTCAGCAAGCTTaGTCTGGAACAATTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TYDACFLLLLCSGTSDSYQLQQA*SGTISL Trigger: TAGAGAAATTGTTCCAGACAAAGCTTGCTGAAGCTG...GTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | CAGACTCATACATGTTGGGACTGGCAGATGAGGACTTCTCAGAAACTTCTGAAGGTGAGTTGTGTTCTTTaGAAATTGGTGGAGGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QTHTCWDWQMRTSQKLLKVSCVL*KLVEVK Trigger: TTTTACCTCCACCAATTTCAAAAGAACACAACTCAC...CTTCAGAAGTTTCTGAGAAGTCCTCATCTGCCAGTCCCAACATGTATGAGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | ACCTACGATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACCTGGAAAATTTGACTTaGCTCAAGACATCTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TYDACFLLLLCSGTSDSYLENLT*LKTSDS Trigger: GGAATCAGATGTCTTGAGCAAAGTCAAATTTTCCAG...GTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATCGTAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | TGCTATCCTGAAACACATGGAACATACTCTTCAGATACTTATATTCCTTGCTCATTTGGTTGTCCCAATTaGCAGCAGTCACAGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CYPETHGTYSSDTYIPCSFGCPN*QQSQQV Trigger: TACCTGCTGTGACTGCTGCAAATTGGGACAACCAAA...TGAGCAAGGAATATAAGTATCTGAAGAGTATGTTCCATGTGTTTCAGGATAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGAAAAATGACAAAAGTACAGAACAACTCAAGAGCTCAGCCTTCCCGGAGTTCTTTCTGGCATaGGAAAAGGTTTGTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QIVKNDKSTEQLKSSAFPEFFLA*EKVCVQ Trigger: CTGAACACAAACCTTTTCCAATGCCAGAAAGAACTC...CGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055313.14 ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | GATGCTTGCTTTTTGTTGCTGTTGTGTTCAGGAACGTCAGACTCATACATGTTGGTCGGGGTCTTTATGTaGTACTTATGCTTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DACFLLLLCSGTSDSYMLVGVFM*YLCFSS Trigger: TGAAGAAAAGCATAAGTACAACATAAAGACCCCGAC...CAACATGTATGAGTCTGACGTTCCTGAACACAACAGCAACAAAAAGCAAGCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055313.14 |
||
| CDS-3UTR CAA 90 bp | CAAATTGTGAAAAATGACAAAAGTACAGAACAACTCAAGAGCTCAGCCTTCCCGTACGATGCTTGCTTTTaGTTGCTGTTGTGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QIVKNDKSTEQLKSSAFPYDACF*LLLCSG Trigger: TCCTGAACACAACAGCAACAAAAAGCAAGCATCGTA...CGGGAAGGCTGAGCTCTTGAGTTGTTCTGTACTTTTGTCATTTTTCACAATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191565.7 |
||
| CDS-3UTR CAA 90 bp | ACATACTCTTCAGATACTTATATTCCTTGCTCATCTTATCTAGTTTCTCTTCGGGTGAGTTGTGTTCTTTaGAAATTGGTGGAGGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: TYSSDTYIPCSSYLVSLRVSCVL*KLVEVK Trigger: TTTTACCTCCACCAATTTCAAAAGAACACAACTCAC...CCGAAGAGAAACTAGATAAGATGAGCAAGGAATATAAGTATCTGAAGAGTATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| CDS GCA 72 bp | AGCCAGGTGACACTTGAATCACTTCAGAAGGTGCTTTaGTGCTCTCTGTGTTTCCTGACTGGACCTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQVTLESLQKVL*CSLCFLTGPCP Trigger: GGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055313.14 ENSMUST00000188772.7 ENSMUST00000191565.7 |
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| CDS CAA 72 bp | GGTGCTTTGCTGCTCTCTGTGTTTCCTGACTGGACCTaGTCCCTTGGGGAAACAGTAGATTTTCCTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GALLLSVFPDWT*SLGETVDFPGW Trigger: CCAACCAGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055313.14 ENSMUST00000188772.7 ENSMUST00000191252.7 ENSMUST00000191565.7 |
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| CDS CCA 72 bp | TCAGAAGGTGCTTTGCTGCTCTCTGTGTTTCCTGACTaGACCTTGTCCCTTGGGGAAACAGTAGATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SEGALLLSVFPD*TLSLGETVDFP Trigger: AGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055313.14 ENSMUST00000188772.7 ENSMUST00000191565.7 |
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| CDS CCA 72 bp | CAAGAAGGTGCTTTGCTGCTCTCTGTGTTTCCTGACTaGACCTTGTCCCTTGGGGAAACAGTAGATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QEGALLLSVFPD*TLSLGETVDFP Trigger: AGGAAAATCTACTGTTTCCCCAAGGGACAAGGTCCAGTCAGGAAACACAGAGAGCAGCAAAGCACCTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191252.7 |
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| CDS TCA 72 bp | TATCTGTTCTCGATTTCGAATGAGTGTATAGCCAGGTaGCACTTGAATCACTTCAGAAGGTGCTTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YLFSISNECIAR*HLNHFRRCFAA Trigger: AGCAGCAAAGCACCTTCTGAAGTGATTCAAGTGTCACCTGGCTATACACTCATTCGAAATCGAGAACAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055313.14 ENSMUST00000188772.7 ENSMUST00000191565.7 |
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