Pregenerated sensors for FKBP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029781Ensembl transcript IDs: ENSMUST00000031795.8
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGATTTGTAGGGAAGGTGACAGGATGGCTGTCGCACGGGGCCTaGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCAATGGCT | + |
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Preference number: 1 (lower is better) Translates to: WRFVGKVTGWLSHGA*YHQSLHRTLRRAMA Trigger: AGCCATTGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAGGCCCCGTGCGACAGCCATCCTGTCACCTTCCCTACAAATCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR GCA 90 bp | CTGGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCAATGGCTaGTGTCAAGGACACTTGCTGAAACATGTGTGCCTTTATCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LVSPELAQNTEKSNG*CQGHLLKHVCLYLS Trigger: AGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTGACAGCAGCCATTGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CCA 90 bp | ATGCAGGTCAAATCCTCTACTCATGGACTAAAGACAGCTTCCATTTaGTCTGTGTTTTTCCTGTCCAGGAGACTCCTGTTAACCTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: MQVKSSTHGLKTASI*SVFFLSRRLLLTFK Trigger: CTTAAAGGTTAACAGGAGTCTCCTGGACAGGAAAAACACAGACCAAATGGAAGCTGTCTTTAGTCCATGAGTAGAGGATTTGACCTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CCA 90 bp | GAAAGCCAATCCTATGTAGAAAATGCAGGTCAAATCCTCTACTCATaGACTAAAGACAGCTTCCATTTGGTCTGTGTTTTTCCTGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: ESQSYVENAGQILYS*TKDSFHLVCVFPVQ Trigger: CTGGACAGGAAAAACACAGACCAAATGGAAGCTGTCTTTAGTCCATGAGTAGAGGATTTGACCTGCATTTTCTACATAGGATTGGCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR CCA 90 bp | TACCACATGGTGTGGGAATGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGTGTCATGCACTCCTTaGCACACACTGATCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: YHMVWEWASLFYSRRPQIVSCTP*HTLICV Trigger: GACACAGATCAGTGTGTGCCAAGGAGTGCATGACAC...AATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCATTCCCACACCATGTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTGGGAATGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCTCTCTTTACTGTCACTaGAAATCCACCCAAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: WCGNGLAFSTAGDLKLPSSLYCH*KSTQVL Trigger: GAGGACTTGGGTGGATTTCCAGTGACAGTAAAGAGA...GGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCATTCCCACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CAA 90 bp | CTTGCACAGAACACTGAGAAGAGCAATGGCTGCTGTCAAGGACACTaGCTGAAACATGTGTGCCTTTATCTTTCTGCCCATGGTGAACTT | + |
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Preference number: 2 (lower is better) Translates to: LAQNTEKSNGCCQGH*LKHVCLYLSAHGEL Trigger: AAGTTCACCATGGGCAGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTGACAGCAGCCATTGCTCTTCTCAGTGTTCTGTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGGGGGTGAACTGGAAAGCATaGAAATGGAGATTTGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAFSTAGDLKLPSKTQMGVNWKA*KWRFVG Trigger: CCCTACAAATCTCCATTTTCATGCTTTCCAGTTCAC...CCCCATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGGGGTGCCAGTGTAGAGAGTaGACTGGAAAGCATGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LAFSTAGDLKLPSKTQMGCQCRE*TGKHEN Trigger: ATTTTCATGCTTTCCAGTTCACTCTCTACACTGGCA...CCCCATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGGGGATCCTATGTAGAAAATaGAGGTCAAATCCTCTACTC | + |
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Preference number: 2 (lower is better) Translates to: LAFSTAGDLKLPSKTQMGILCRK*RSNPLL Trigger: GAGTAGAGGATTTGACCTGCATTTTCTACATAGGAT...CCCCATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGTCACCTTCATTTGTTaGGATAACACATCCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: WASLFYSRRPQIAFQDTNVTFIC*DNTSTL Trigger: TAAAGTGGATGTGTTATCCCAACAAATGAAGGTGAC...ATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR TCA 72 bp | GGCTACTCTCAAACCTTCCTAGAAAGCTTCACACCTTaGCAGCATGCTCCGCCACGACAGGTCGCTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GYSQTFLESFTP*QHAPPRQVAWC Trigger: ACACCAAGCGACCTGTCGTGGCGGAGCATGCTGTCAAGGTGTGAAGCTTTCTAGGAAGGTTTGAGAGTAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTGGGAATGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAGAAAGCTTCACACCTaGACAGCATGCTCCGCCACG | + |
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Preference number: 3 (lower is better) Translates to: WCGNGLAFSTAGDLKLPSRKLHT*TACSAT Trigger: CGTGGCGGAGCATGCTGTCAAGGTGTGAAGCTTTCT...GGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCATTCCCACACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR GCA 72 bp | TCAAACCTTCCTAGAAAGCTTCACACCTTGACAGCATaGTCCGCCACGACAGGTCGCTTGGTGTCATGCACT | + |
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Preference number: 3 (lower is better) Translates to: SNLPRKLHTLTA*SATTGRLVSCT Trigger: AGTGCATGACACCAAGCGACCTGTCGTGGCGGAGCATGCTGTCAAGGTGTGAAGCTTTCTAGGAAGGTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR GCA 72 bp | CCAGAGCTTGCACAGAACACTGAGAAGAGCAATGGCTaGTGTCAAGGACACTTGCTGAAACATGTGTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PELAQNTEKSNG*CQGHLLKHVCL Trigger: AAGGCACACATGTTTCAGCAAGTGTCCTTGACAGCAGCCATTGCTCTTCTCAGTGTTCTGTGCAAGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CCA 72 bp | GCCAAAGCACTATATACAGATTCTCTTTACTGTCACTaGAAATCCACCCAAGTCCTCACCGTGGGCATCAGC | + |
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Preference number: 3 (lower is better) Translates to: AKALYTDSLYCH*KSTQVLTVGIS Trigger: GCTGATGCCCACGGTGAGGACTTGGGTGGATTTCCAGTGACAGTAAAGAGAATCTGTATATAGTGCTTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CCA 72 bp | TCCTATGTAGAAAATGCAGGTCAAATCCTCTACTCATaGACTAAAGACAGCTTCCATTTGGTCTGTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SYVENAGQILYS*TKDSFHLVCVF Trigger: AAAAACACAGACCAAATGGAAGCTGTCTTTAGTCCATGAGTAGAGGATTTGACCTGCATTTTCTACATAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR TCA 90 bp | CTGTCGCACGGGGCCTGGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCAGAACACCAGCACGGCTaGGCCAGGAATGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSHGAWYHQSLHRTLRRAEHQHG*ARNAPS Trigger: AGAGGGAGCATTCCTGGCTCAGCCGTGCTGGTGTTC...TGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAGGCCCCGTGCGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | CAAGGACACTTGCTGAAACATGTGTGCCTTTATCTTTCTGCCCATGGTGAACTTGCCCAACACCGGGGCTaGCTGCCCGGTCACCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QGHLLKHVCLYLSAHGELAQHRG*LPGHPE Trigger: CTCTGGGTGACCGGGCAGGCAGCCCCGGTGTTGGGC...AAGTTCACCATGGGCAGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | CTGTCGCACGGGGCCTGGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCACAGGAATGCTCCCTCTaGCTTTTTCTCCGTAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSHGAWYHQSLHRTLRRAQECSL*LFLRSP Trigger: TGGGCTACGGAGAAAAAGGCAGAGGGAGCATTCCTG...TGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAGGCCCCGTGCGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | CTGTCGCACGGGGCCTGGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCAAGTCCCTGTCATAGCTaGAGTCGAACTTCTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSHGAWYHQSLHRTLRRASPCHS*SRTSGR Trigger: ACGGCCAGAAGTTCGACTCCAGCTATGACAGGGACT...TGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAGGCCCCGTGCGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | GCACTATATACAGATTCTCTTTACTGTCACTGGAAATCCACCCAAGTCCTCACCAACACCGGGGCTGCCTaGCCGGTCACCCAGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYTDSLYCHWKSTQVLTNTGAA*PVTQSS Trigger: GCTGCTCTGGGTGACCGGGCAGGCAGCCCCGGTGTT...GGTGAGGACTTGGGTGGATTTCCAGTGACAGTAAAGAGAATCTGTATATAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CAA 72 bp | TGGCTACTCTCAAACCTTCCTAGAAAGCTTCACACCTaGACAGCATGCTCCGCCACGACAGGTCGCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WLLSNLPRKLHT*TACSATTGRLV Trigger: CACCAAGCGACCTGTCGTGGCGGAGCATGCTGTCAAGGTGTGAAGCTTTCTAGGAAGGTTTGAGAGTAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | CAAGGACACTTGCTGAAACATGTGTGCCTTTATCTTTCTGCCCATGGTGAACTTACGAAGTCGCCACTGTaGACCGTGCGCGGACACTCA | + |
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Preference number: 4 (lower is better) Translates to: QGHLLKHVCLYLSAHGELTKSPL*TVRGHS Trigger: TGAGTGTCCGCGCACGGTGCACAGTGGCGACTTCGT...AAGTTCACCATGGGCAGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | CTGTCGCACGGGGCCTGGTATCACCAGAGCTTGCACAGAACACTGAGAAGAGCACCACCTTATTCTCAATaGAAATGGTATCCTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSHGAWYHQSLHRTLRRAPPYSQ*KWYPWG Trigger: ACCCCAAGGATACCATTTCCATTGAGAATAAGGTGG...TGCTCTTCTCAGTGTTCTGTGCAAGCTCTGGTGATACCAGGCCCCGTGCGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR TCA 90 bp | TACCACATGGTGTGGGAATGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTAGGAAGTCCCCACTCTaGCTTCTCCTCTCACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: YHMVWEWASLFYSRRPQIRKSPL*LLLSQF Trigger: GAACTGTGAGAGGAGAAGTCAGAGTGGGGACTTCCT...AATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCATTCCCACACCATGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | ATATACAGATTCTCTTTACTGTCACTGGAAATCCACCCAAGTCCTCACCGTGGGCGGCTGAGCCAGGAATaGTCCCTCTGCCTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IYRFSLLSLEIHPSPHRGRLSQE*SLCLFL Trigger: GAGAAAAAGGCAGAGGGAGCATTCCTGGCTCAGCCG...CCCACGGTGAGGACTTGGGTGGATTTCCAGTGACAGTAAAGAGAATCTGTATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGAGCCAGCTTCCCTTTaGCTGTTGCCACTTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: WASLFYSRRPQIAFQDTNEPASL*LLPLGH Trigger: ATGCCCAAGTGGCAACAGGCAAAGGGAAGCTGGCTC...ATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | GCACTATATACAGATTCTCTTTACTGTCACTGGAAATCCACCCAAGTCCTCACCCTGGAGTCGAACTTCTaGCCGTCGAGGAAAGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ALYTDSLYCHWKSTQVLTLESNF*PSRKVP Trigger: GGGGACTTTCCTCGACGGCCAGAAGTTCGACTCCAG...GGTGAGGACTTGGGTGGATTTCCAGTGACAGTAAAGAGAATCTGTATATAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | TGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATTTCGCCTCTCCCCAATaGAGACACCAAGTAAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: WASLFYSRRPQIAFQDTNFASPQ*RHQVSL Trigger: AAGGCTTACTTGGTGTCTGCATTGGGGAGAGGCGAA...ATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTGGGAATGGGCTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCACAGTTCATCATGTTTaGCTTCCTGATCCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: WCGNGLAFSTAGDLKLPSTVHHV*LPDPSV Trigger: AACTGAAGGATCAGGAAGCCAAACATGATGAACTGT...GGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAGCCCATTCCCACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | CTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGGGGTTTCTTCAAAGAGGTTaGGAGACACTTCACCATTCC | + |
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Preference number: 4 (lower is better) Translates to: LAFSTAGDLKLPSKTQMGFLQRG*ETLHHS Trigger: GGAATGGTGAAGTGTCTCCCAACCTCTTTGAAGAAA...CCCCATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| 3UTR CAA 72 bp | AACACTGAGAAGAGCAATGGCTGCTGTCAAGGACACTaGCTGAAACATGTGTGCCTTTATCTTTCTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: NTEKSNGCCQGH*LKHVCLYLSAH Trigger: ATGGGCAGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTGACAGCAGCCATTGCTCTTCTCAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR TCA 90 bp | CCTGGGTACTTCTTCTGTTTCCTCCATGACAGCTACATCTTCTATGAAATAATTGGCATGAATGTACTCTaGGAACTCCTCCAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PGYFFCFLHDSYIFYEIIGMNVL*ELLQED Trigger: GTCCTCCTGGAGGAGTTCTCAGAGTACATTCATGCC...AATTATTTCATAGAAGATGTAGCTGTCATGGAGGAAACAGAAGAAGTACCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | CAAGGACACTTGCTGAAACATGTGTGCCTTTATCTTTCTGCCCATGGTGAACTTACAAAATCCGATACTTaGATAGTCCGAGGGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: QGHLLKHVCLYLSAHGELTKSDT*IVRGQL Trigger: CAGTTGCCCTCGGACTATCCAAGTATCGGATTTTGT...AAGTTCACCATGGGCAGAAAGATAAAGGCACACATGTTTCAGCAAGTGTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CCA 90 bp | ACCAATTGCATTTGTGCCAAAGCACTATATACAGATTCTCTTTACTGTCACTGGTGCCTAAGTTCCACGTaGAGTCCAGCAGAGTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TNCICAKALYTDSLYCHWCLSST*SPAESH Trigger: ATGGGACTCTGCTGGACTCCACGTGGAACTTAGGCA...CCAGTGACAGTAAAGAGAATCTGTATATAGTGCTTTGGCACAAATGCAATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR GCA 90 bp | AGACTTTTAAACCAAATCGTTTCTTTAGGTAGACACCTGGGTACTTCTTCTGTTAAGACTAAGGATGCCTaGCCAGGGATGTCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLLNQIVSLGRHLGTSSVKTKDA*PGMSFP Trigger: TGGAAAAGACATCCCTGGGCAGGCATCCTTAGTCTT...AACAGAAGAAGTACCCAGGTGTCTACCTAAAGAAACGATTTGGTTTAAAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 90 bp | CTGGATCTGAAGTTCCGAGCTCACAGCCAGGCCCAACACCGGGGCTaGCTGCCCGGTCACCCAGAGCAGCAGCAGGAGCAGCGACCGGCG | + |
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Preference number: 5 (lower is better) Translates to: LDLKFRAHSQAQHRG*LPGHPEQQQEQRPA Trigger: CGCCGGTCGCTGCTCCTGCTGCTGCTCTGGGTGACCGGGCAGGCAGCCCCGGTGTTGGGCCTGGCTGTGAGCTCGGAACTTCAGATCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 90 bp | AAGTCCCCACGTAGTGGTAGCGCACGAAGTCGCCACTGTGCACCGTaGGCGGACACTCATCAGGCACGAAGCTCTGCTGGATCTGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: KSPRSGSARSRHCAP*ADTHQARSSAGSEV Trigger: AACTTCAGATCCAGCAGAGCTTCGTGCCTGATGAGTGTCCGCGCACGGTGCACAGTGGCGACTTCGTGCGCTACCACTACGTGGGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CAA 90 bp | CTAGCCTTTTCTACAGCAGGAGACCTCAAATTGCCTTCCAAGACACAAATGGGGCATCCCCAGCACGACTaGTCCAGACCCCAACACAAT | + |
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Preference number: 5 (lower is better) Translates to: LAFSTAGDLKLPSKTQMGHPQHD*SRPQHN Trigger: ATTGTGTTGGGGTCTGGACAAGTCGTGCTGGGGATG...CCCCATTTGTGTCTTGGAAGGCAATTTGAGGTCTCCTGCTGTAGAAAAGGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CAA 90 bp | ATCGTTTCTTTAGGTAGACACCTGGGTACTTCTTCTGTTTCCTCCATGACAGCTGGAGCCAGCTTCCCTTaGCCTGTTGCCACTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: IVSLGRHLGTSSVSSMTAGASFP*PVATWA Trigger: TGCCCAAGTGGCAACAGGCAAAGGGAAGCTGGCTCC...AGCTGTCATGGAGGAAACAGAAGAAGTACCCAGGTGTCTACCTAAAGAAACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 90 bp | CAGGGATCAGCCATCCAATCCCCACGTACGTGTCATAGGTTTTCATaGGATTATGGCTGGAATCAAACAGTGTCCCATCCAAGAACGTTC | + |
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Preference number: 5 (lower is better) Translates to: QGSAIQSPRTCHRFS*DYGWNQTVSHPRTF Trigger: GAACGTTCTTGGATGGGACACTGTTTGATTCCAGCCATAATCGCATGAAAACCTATGACACGTACGTGGGGATTGGATGGCTGATCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS-3UTR CAA 90 bp | ATCGTTTCTTTAGGTAGACACCTGGGTACTTCTTCTGTTTCCTCCATGACAGCTCACAAAATCCGATACTaGGATAGTCCGAGGGCAACT | + |
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Preference number: 5 (lower is better) Translates to: IVSLGRHLGTSSVSSMTAHKIRY*DSPRAT Trigger: AGTTGCCCTCGGACTATCCAAGTATCGGATTTTGTG...AGCTGTCATGGAGGAAACAGAAGAAGTACCCAGGTGTCTACCTAAAGAAACGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 72 bp | AAGTTCCGAGCTCACAGCCAGGCCCAACACCGGGGCTaGCTGCCCGGTCACCCAGAGCAGCAGCAGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KFRAHSQAQHRG*LPGHPEQQQEQ Trigger: CTGCTCCTGCTGCTGCTCTGGGTGACCGGGCAGGCAGCCCCGGTGTTGGGCCTGGCTGTGAGCTCGGAACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 72 bp | CGTAGTGGTAGCGCACGAAGTCGCCACTGTGCACCGTaGGCGGACACTCATCAGGCACGAAGCTCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RSGSARSRHCAP*ADTHQARSSAG Trigger: TCCAGCAGAGCTTCGTGCCTGATGAGTGTCCGCGCACGGTGCACAGTGGCGACTTCGTGCGCTACCACTACG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 72 bp | CGACTTGTCCAGACCCCAACACAATGTTATACGTTTTaGCTAAGTTCCACGTGGAGTCCAGCAGAGTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: RLVQTPTQCYTF*LSSTWSPAESH Trigger: ATGGGACTCTGCTGGACTCCACGTGGAACTTAGGCAAAACGTATAACATTGTGTTGGGGTCTGGACAAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS CAA 72 bp | ACGACTTGTCCAGACCCCAACACAATGTTATACGTTTaGCCTAAGTTCCACGTGGAGTCCAGCAGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TTCPDPNTMLYV*PKFHVESSRVP Trigger: TGGGACTCTGCTGGACTCCACGTGGAACTTAGGCAAAACGTATAACATTGTGTTGGGGTCTGGACAAGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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| CDS GCA 72 bp | GCCATCCAATCCCCACGTACGTGTCATAGGTTTTCATaGGATTATGGCTGGAATCAAACAGTGTCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: AIQSPRTCHRFS*DYGWNQTVSHP Trigger: TGGATGGGACACTGTTTGATTCCAGCCATAATCGCATGAAAACCTATGACACGTACGTGGGGATTGGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031795.8 |
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