RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002732

Ensembl transcript IDs: ENSMUST00000002809.14, ENSMUST00000176815.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTGCACAGAGATaGTTAATCAAAGCACTAGAAAGCCACATGCACTTTAAGACATGC +
Preference number: 1 (lower is better)
Translates to: NIRVALGGILPSAQR*LIKALESHMHFKTC
Trigger: GCATGTCTTAAAGTGCATGTGGCTTTCTAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
3UTR GCA 90 bp TTCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTaGACAGAGATGGTTAATCAAAGCACTAGAAAGCCACATGCACTT +
Preference number: 1 (lower is better)
Translates to: FNLKHQSCIGWNLAF*TEMVNQSTRKPHAL
Trigger: AAGTGCATGTGGCTTTCTAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
3UTR CCA 72 bp GTTGCATTGGGTGGAATCTTGCCTTCTGCACAGAGATaGTTAATCAAAGCACTAGAAAGCCACATGCACTTT +
Preference number: 3 (lower is better)
Translates to: VALGGILPSAQR*LIKALESHMHF
Trigger: AAAGTGCATGTGGCTTTCTAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
3UTR GCA 72 bp AAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTaGACAGAGATGGTTAATCAAAGCACTAGAAAGCCA +
Preference number: 3 (lower is better)
Translates to: KHQSCIGWNLAF*TEMVNQSTRKP
Trigger: TGGCTTTCTAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
3UTR CCA 72 bp ATAAAGTTCAATCTCAAACATCAGAGTTGCATTGGGTaGAATCTTGCCTTCTGCACAGAGATGGTTAATCAA +
Preference number: 3 (lower is better)
Translates to: IKFNLKHQSCIG*NLAFCTEMVNQ
Trigger: TTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAACTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS-3UTR GCA 90 bp AAAGTTCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTGCACCATCTTGTGTCCGGCTaGAGTAGAATTTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: KVQSQTSELHWVESCLLHHLVSG*SRIWSR
Trigger: ACGGCTCCAAATTCTACTGCAGCCGGACACAAGATG...GTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS-3UTR CCA 90 bp AAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTGCACAGAGATGGTTAATACAAACCATTTGGGGTaGCCTTCATCTTGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KHQSCIGWNLAFCTEMVNTNHLG*PSSCVR
Trigger: CCGGACACAAGATGAAGGCCACCCCAAATGGTTTGT...ATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS-3UTR CCA 90 bp AACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTGCACAGAGATGGTTAATCTTTGGAGCAGTTTTCTaGACGGTGCAAAACTTCTAT +
Preference number: 4 (lower is better)
Translates to: NIRVALGGILPSAQRWLIFGAVF*TVQNFY
Trigger: ATAGAAGTTTTGCACCGTCCAGAAAACTGCTCCAAA...GATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
3UTR CAA 72 bp TCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTaGCCTTCTGCACAGAGATGGTTAATCAAAGCACTA +
Preference number: 4 (lower is better)
Translates to: SISNIRVALGGI*PSAQRWLIKAL
Trigger: TAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS-3UTR CAA 90 bp AGCATAAAGTTCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCGGGGTGGCCTTCATCTaGTGTCCGGCTGCAGTAGAA +
Preference number: 5 (lower is better)
Translates to: SIKFNLKHQSCIGWNLAFGVAFI*CPAAVE
Trigger: TTCTACTGCAGCCGGACACAAGATGAAGGCCACCCC...GAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAACTTTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS-3UTR CAA 90 bp GGGTGGAATCTTGCCTTCTGCACAGAGATGGTTAATCAAAGCACTAGAAAGCCACAGTGCTTTCTTCTTTaGTTTGTCCCTGAGCATCGG +
Preference number: 5 (lower is better)
Translates to: GWNLAFCTEMVNQSTRKPQCFLL*FVPEHR
Trigger: CCGATGCTCAGGGACAAACAAAAGAAGAAAGCACTG...TGGCTTTCTAGTGCTTTGATTAACCATCTCTGTGCAGAAGGCAAGATTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS GCA 90 bp CATAAAGTTCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTaGCTTCTGCGTAGCCTTCTTTTCCATATGCAAACGAAGGCGGTA +
Preference number: 5 (lower is better)
Translates to: HKVQSQTSELHWVES*LLRSLLFHMQTKAV
Trigger: TACCGCCTTCGTTTGCATATGGAAAAGAAGGCTACGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAACTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002809.14
CDS-3UTR CAA 90 bp CATAAAGTTCAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTGCCTTCTGGCTTTCTTCTTTTGTTaGTCCCTGAGCATCGGAACA +
Preference number: 5 (lower is better)
Translates to: HKVQSQTSELHWVESCLLAFFFC*SLSIGT
Trigger: TGTTCCGATGCTCAGGGACAAACAAAAGAAGAAAGC...CAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTGAACTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176815.2
CDS TCA 72 bp TTCACTTCCTCAGTGCTTTCTTCTTTTGTTTGTCCCTaGGCATCGGAACAACACCACAGGCTAAGGAAAACT +
Preference number: 6 (lower is better)
Translates to: FTSSVLSSFVCP*ASEQHHRLRKT
Trigger: AGTTTTCCTTAGCCTGTGGTGTTGTTCCGATGCTCAGGGACAAACAAAAGAAGAAAGCACTGAGGAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000002809.14
ENSMUST00000176815.2
CDS GCA 72 bp CAATCTCAAACATCAGAGTTGCATTGGGTGGAATCTTaGCTTCTGCGTAGCCTTCTTTTCCATATGCAAACG +
Preference number: 6 (lower is better)
Translates to: QSQTSELHWVES*LLRSLLFHMQT
Trigger: CGTTTGCATATGGAAAAGAAGGCTACGCAGAAGGCAAGATTCCACCCAATGCAACTCTGATGTTTGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002809.14
CDS GCA 72 bp TGGAATCTTGCCTTCTGCGTAGCCTTCTTTTCCATATaGAAACGAAGGCGGTATAATCACCTTTCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: WNLAFCVAFFSI*KRRRYNHLSLF
Trigger: GAAAAGAGAAAGGTGATTATACCGCCTTCGTTTGCATATGGAAAAGAAGGCTACGCAGAAGGCAAGATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002809.14