Pregenerated sensors for FKBP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040013Ensembl transcript IDs: ENSMUST00000044972.11, ENSMUST00000201534.2, ENSMUST00000201784.4, ENSMUST00000201791.4
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTGGATTCTGTCCTATGCTGTTCTCAGTGGCGAGCGAGAGCCGTaGGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGAT | + |
|
Preference number: 1 (lower is better) Translates to: QWILSYAVLSGEREP*EGASPQWTEPESLD Trigger: ATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCATAGGACAGAATCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR-3UTR GCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACGTGGATTCTGTCCTATaGTGTTCTCAGTGGCGAGCG | + |
|
Preference number: 2 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHVDSVL*CSQWRA Trigger: CGCTCGCCACTGAGAACAGCATAGGACAGAATCCAC...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR-3UTR TCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAAGTGCTCCTCCTTCAGTaGCCACTCTGTGGGGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: NFTKYEKVVEWESSGPPKVLLLQ*PLCGEP Trigger: GGGCTCCCCACAGAGTGGTCACTGAAGGAGGAGCAC...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAAGGGGAGCCCCCACAGTaGATTCTGTCCTATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NFTKYEKVVEWESSGPPKGEPPQ*ILSYAV Trigger: AACAGCATAGGACAGAATCCACTGTGGGGGCTCCCC...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR GCA 72 bp | CAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAGTCTaGGCTAGGGAGCTCCATCCATCCCCAGCCACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QGVCLPEVSGAV*ARELHPSPATV Trigger: TACTGTGGCTGGGGATGGATGGAGCTCCCTAGCGCAGACTGCTCCAGACACCTCTGGAAGACAGACACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| 3UTR CCA 72 bp | GCCCCCACAGTGGATTCTGTCCTATGCTGTTCTCAGTaGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: APTVDSVLCCSQ*RARAVRRSISP Trigger: TGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCATAGGACAGAATCCACTGTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR CCA 72 bp | GCTAGGGAGCTCCATCCATCCCCAGCCACAGTACACTaGAGGAGTCCAGTCTTGCTTGCAGTAGCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: ARELHPSPATVH*RSPVLLAVAET Trigger: GGTCTCAGCTACTGCAAGCAAGACTGGACTCCTCCAGTGTACTGTGGCTGGGGATGGATGGAGCTCCCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCATGGAGGAGTCCAGTCTaGCTTGCAGTAGCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAWRSPV*LAVAET Trigger: GGTCTCAGCTACTGCAAGCAAGACTGGACTCCTCCA...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| 3UTR TCA 72 bp | CTGTCCTATGCTGTTCTCAGTGGCGAGCGAGAGCCGTaGGAAGGAGCATCTCCCCAATGGACAGAGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSYAVLSGEREP*EGASPQWTEPE Trigger: TTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCATAGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR TCA 72 bp | AAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTaGCCACTCTGTGGGGAGCCCCCACAGTGGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KHECKLQVLLLQ*PLCGEPPQWIL Trigger: CAGAATCCACTGTGGGGGCTCCCCACAGAGTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCATGGAGGAGTCCAGTCTaGCTTGCAGTAGCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: TQQNIQSLSICTDPLTSAWRSPV*LAVAET Trigger: GGTCTCAGCTACTGCAAGCAAGACTGGACTCCTCCA...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| 3UTR TCA 72 bp | AACCCAACAGAATATACAAAGCCTTTCTATCTGTACTaGCCCACTGACATCAGCAGTTGGAAAGGAGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NPTEYTKPFYLY*PTDISSWKGGG Trigger: ACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACCAGGACGGTGGCATTTaGCGGGATGAGGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDQDGGI*RDEGRA Trigger: TGCCCTCCCCTCATCCCGCCAAATGCCACCGTCCTG...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCGTTCCCCTTTGCGCATaGTCAGAAGGCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRAVPLCA*SEGPAP Trigger: TGGAGCTGGGCCTTCTGAGCATGCGCAAAGGGGAAC...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCACAGGACGGTGGCATTTaGCGGGATGAGGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAQDGGI*RDEGRA Trigger: TGCCCTCCCCTCATCCCGCCAAATGCCACCGTCCTG...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAAAGCCTGTCCACACCTaGAGAGGGCCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAKPVHT*RGPWRS Trigger: GGAACGCCAAGGCCCTCTTCAGGTGTGGACAGGCTT...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDAGSTK*CSSQVA Trigger: GGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGC...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCCAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRAQGCSF*ARTRKS Trigger: GGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTG...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAGTTCCCCTTTGCGCATaGTCAGAAGGCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAVPLCA*SEGPAP Trigger: TGGAGCTGGGCCTTCTGAGCATGCGCAAAGGGGAAC...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRAGSTKC*SSQVAN Trigger: ATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACC...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCEPGVTVRAGRVSVFQRAGSTK*CSSQVA Trigger: GGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGC...CCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | CGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCGAGACTGGCCTAGGATaGCAGCCCCTTCCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REKEHLPNGQSLNLWMKAETGLG*QPLPGL Trigger: GAGCCCTGGAAGGGGCTGGCATCCTAGGCCAGTCTC...GGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGCATAGCGCAGGGCCATaGCAGGTCGGTCTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VCEPGVTVRAGRVSVFQRHSAGP*QVGLAS Trigger: TGAAGCTAGACCGACCTGCCATGGCCCTGCGCTATG...CCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | CGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCAAGCCTGTCCACACCTaGAGAGGGCCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: REKEHLPNGQSLNLWMKAKPVHT*RGPWRS Trigger: GGAACGCCAAGGCCCTCTTCAGGTGTGGACAGGCTT...GGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACTCAGTTTCCTCCCACTaGAGATCTGCTTCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDSVSSH*RSASTG Trigger: CCCTGTGGAAGCAGATCTTCAGTGGGAGGAAACTGA...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTGTTCCCCTTTGCGCATaGTCAGAAGGCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCVPLCA*SEGPAP Trigger: TGGAGCTGGGCCTTCTGAGCATGCGCAAAGGGGAAC...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCCTCCCACTGAAGATCTaGTTCCACAGGGAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRALPLKI*FHREQT Trigger: TGTTTGCTCCCTGTGGAAGCAGATCTTCAGTGGGAG...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | AGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGCAGGACGGTGGCATTTaGCGGGATGAGGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SREKEHLPNGQSLNLWMKQDGGI*RDEGRA Trigger: TGCCCTCCCCTCATCCCGCCAAATGCCACCGTCCTG...CTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCATAGCGCAGGGCCATaGCAGGTCGGTCTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCHSAGP*QVGLAS Trigger: TGAAGCTAGACCGACCTGCCATGGCCCTGCGCTATG...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGCAGTGCCCTCTCGGATaGTGTCCTTCAGCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQQCPLG*CPSAHL Trigger: GAGGTGTGCTGAAGGACATCATCCGAGAGGGCACTG...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCACGTTCCTTTTGTCAATaGGCAGAGCCTGCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGARSFCQ*AEPAPH Trigger: ATGGGGAGCAGGCTCTGCTCATTGACAAAAGGAACG...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGAAGCCTGTCCACACCTaGAGAGGGCCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SICTDPLTSAVGKEVVVRKPVHT*RGPWRS Trigger: GGAACGCCAAGGCCCTCTTCAGGTGTGGACAGGCTT...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCACAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAQGCSF*ARTRKS Trigger: GGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTG...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | GTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGCAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCEPGVTVRAGRVSVFQRQGCSF*ARTRKS Trigger: GGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTG...CCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACGGCGGAAAAGGTAGTTaGCAAACTCCCTCTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDGGKGS*QTPSQL Trigger: CAACTGAGAGGGAGTTTGGCAACTACCTTTTCCGCC...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCEPGVTVRAGRVSVFQRGSTKC*SSQVAN Trigger: ATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACC...CCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQAGSTK*CSSQVA Trigger: GGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGC...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGCAGTGCCCTCTCGGATaGTGTCCTTCAGCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SICTDPLTSAVGKEVVVRQCPLG*CPSAHL Trigger: GAGGTGTGCTGAAGGACATCATCCGAGAGGGCACTG...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACCAGTTGCTGCTACTTTaGGGACTTTCTGGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDQLLLL*GLSGVE Trigger: TTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTG...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTTCAGTTTCCTCCCACTaGAGATCTGCTTCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCSVSSH*RSASTG Trigger: CCCTGTGGAAGCAGATCTTCAGTGGGAGGAAACTGA...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACGTTCCCCTTTGCGCATaGTCAGAAGGCCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDVPLCA*SEGPAP Trigger: TGGAGCTGGGCCTTCTGAGCATGCGCAAAGGGGAAC...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAGGCGGAAAAGGTAGTTaGCAAACTCCCTCTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAGGKGS*QTPSQL Trigger: CAACTGAGAGGGAGTTTGGCAACTACCTTTTCCGCC...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR GCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCGSTKC*SSQVAN Trigger: ATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACC...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCATAGCGCAGGGCCATaGCAGGTCGGTCTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDHSAGP*QVGLAS Trigger: TGAAGCTAGACCGACCTGCCATGGCCCTGCGCTATG...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGCGTTCCTTTTGTCAATaGGCAGAGCCTGCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQRSFCQ*AEPAPH Trigger: ATGGGGAGCAGGCTCTGCTCATTGACAAAAGGAACG...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTTTTCAGCTCATTATTaGTGTCATGGTTGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRAFSAHY*CHGCRA Trigger: AGCCCTGCAACCATGACATCAATAATGAGCTGAAAA...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCAAACTCCCTCTCAGTTaGTGCTACTTTGAGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQWRARAVRRSISPMDRAKLPLS*CYFEDF Trigger: AAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTT...GGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGAGTCCCTGTAGTGGCTaGACAGCTTTTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCEPGVTVRAGRVSVFQRSPCSG*TAFSAH Trigger: ATGAGCTGAAAAAGCTGTCCAGCCACTACAGGGACT...CCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCAGTTGCTGCTACTTTaGGGACTTTCTGGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCQLLLL*GLSGVE Trigger: TTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTG...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACCGTTCCTTTTGTCAATaGGCAGAGCCTGCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHRSFCQ*AEPAPH Trigger: ATGGGGAGCAGGCTCTGCTCATTGACAAAAGGAACG...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | AGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGCAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SREKEHLPNGQSLNLWMKQGCSF*ARTRKS Trigger: GGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTG...CTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACTCAGTTTCCTCCCACTaGAGATCTGCTTCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHSVSSH*RSASTG Trigger: CCCTGTGGAAGCAGATCTTCAGTGGGAGGAAACTGA...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTAGTGGAAACTGTTCTTaGTGCTCAGCTGAGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCSGNCS*CSAESA Trigger: TGCACTCTCAGCTGAGCAGCAAGAACAGTTTCCACT...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDGSTKC*SSQVAN Trigger: ATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACC...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGCACAGGGAGCAAACATaGGGTGACACATCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQHREQT*GDTSLS Trigger: AGAGAGAGATGTGTCACCGCATGTTTGCTCCCTGTG...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | ACTACCTTTGCTACTGTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGCACAGGGAGCAAACATaGGGTGACACATCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTFATVCEPGVTVRAGRVHREQT*GDTSLS Trigger: AGAGAGAGATGTGTCACCGCATGTTTGCTCCCTGTG...CACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACACAGTAGCAAAGGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACACTTTGAGGACTTTCTaGAGTGGAAACTGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCSQWRARAVRRSISPMDTLRTF*SGNCSC Trigger: GCAAGAACAGTTTCCACTCCAGAAAGTCCTCAAAGT...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | ACTACCTTTGCTACTGTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGCTCCCTCTCAGTTGCTaGTACTTTGAGGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTFATVCEPGVTVRAGRVLPLSC*YFEDFL Trigger: CAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAG...CACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACACAGTAGCAAAGGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR GCA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAAAACTCCCTCTCAGTTaGTGCTACTTTGAGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAKLPLS*CYFEDF Trigger: AAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTT...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR GCA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGCACAGGGAGCAAACATaGGGTGACACATCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SICTDPLTSAVGKEVVVRHREQT*GDTSLS Trigger: AGAGAGAGATGTGTCACCGCATGTTTGCTCCCTGTG...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGCTCCCACTGAAGATCTaGTTCCACAGGGAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SICTDPLTSAVGKEVVVRLPLKI*FHREQT Trigger: TGTTTGCTCCCTGTGGAAGCAGATCTTCAGTGGGAG...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACCAGTTGCTGCTACTTTaGGGACTTTCTGGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHQLLLL*GLSGVE Trigger: TTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTG...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | TGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTTTTTCAGCTCATTATTaGTGTCATGGTTGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CEPGVTVRAGRVSVFQRCFSAHY*CHGCRA Trigger: AGCCCTGCAACCATGACATCAATAATGAGCTGAAAA...ACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | AGCCGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGCTCCCTCTCAGTTGCTaGTACTTTGAGGACTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SREKEHLPNGQSLNLWMKLPLSC*YFEDFL Trigger: CAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAG...CTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACAGTCCCTGTAGTGGCTaGACAGCTTTTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDSPCSG*TAFSAH Trigger: ATGAGCTGAAAAAGCTGTCCAGCCACTACAGGGACT...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACAGTCCCTGTAGTGGCTaGACAGCTTTTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHSPCSG*TAFSAH Trigger: ATGAGCTGAAAAAGCTGTCCAGCCACTACAGGGACT...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCACAGTGCCCTCTCGGATaGTGTCCTTCAGCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSAQCPLG*CPSAHL Trigger: GAGGTGTGCTGAAGGACATCATCCGAGAGGGCACTG...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | ACTACCTTTGCTACTGTGTGTGAACCTGGAGTAACAGTCAGGGCTGGCAGGGTGTTTTCAGCTCATTATTaGTGTCATGGTTGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTFATVCEPGVTVRAGRVFSAHY*CHGCRA Trigger: AGCCCTGCAACCATGACATCAATAATGAGCTGAAAA...CACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACACAGTAGCAAAGGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGTTTTCAGCTCATTATTaGTGTCATGGTTGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQFSAHY*CHGCRA Trigger: AGCCCTGCAACCATGACATCAATAATGAGCTGAAAA...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCAGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSAAGSTK*CSSQVA Trigger: GGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGC...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCAGTGGCCAATCGTCGGTaGAGCAGCAGCAAAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSAVANRR*SSSKAA Trigger: AGCTGCTTTGCTGCTGCTCCACCGACGATTGGCCAC...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACAAACTCCCTCTCAGTTaGTGCTACTTTGAGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHKLPLS*CYFEDF Trigger: AAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTT...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGACTTTGAGGACTTTCTaGAGTGGAAACTGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SICTDPLTSAVGKEVVVRTLRTF*SGNCSC Trigger: GCAAGAACAGTTTCCACTCCAGAAAGTCCTCAAAGT...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACTCATTATTGATGTCATaGTTGCAGGGCTGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDSLLMS*LQGCSF Trigger: GAAAGAGCAGCCCTGCAACCATGACATCAATAATGA...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAACAGTGCCCTCTCGGATaGTGTCCTTCAGCACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NFTKYEKVVEWESSGPPKQCPLG*CPSAHL Trigger: GAGGTGTGCTGAAGGACATCATCCGAGAGGGCACTG...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR TCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCACGTTCCTTTTGTCAATaGGCAGAGCCTGCTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSARSFCQ*AEPAPH Trigger: ATGGGGAGCAGGCTCTGCTCATTGACAAAAGGAACG...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCACAGCAGCAAAGCAGCTaGGAGTGCACAGAACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSAQQQSS*ECTELV Trigger: GACAAGTTCTGTGCACTCTCAGCTGCTTTGCTGCTG...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAACATAGCGCAGGGCCATaGCAGGTCGGTCTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFTKYEKVVEWESSGPPKHSAGP*QVGLAS Trigger: TGAAGCTAGACCGACCTGCCATGGCCCTGCGCTATG...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCACTCCCACTGAAGATCTaGTTCCACAGGGAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSALPLKI*FHREQT Trigger: TGTTTGCTCCCTGTGGAAGCAGATCTTCAGTGGGAG...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR TCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCATGCACAGAACTTGTCTaGCTCAGCAGAATCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSACTELV*LSRIQE Trigger: TTCCTGGATTCTGCTGAGTCAGACAAGTTCTGTGCA...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCAAGTCCCTGTAGTGGCTaGACAGCTTTTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSASPCSG*TAFSAH Trigger: ATGAGCTGAAAAAGCTGTCCAGCCACTACAGGGACT...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR GCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAACACAGGGAGCAAACATaGGGTGACACATCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NFTKYEKVVEWESSGPPKHREQT*GDTSLS Trigger: AGAGAGAGATGTGTCACCGCATGTTTGCTCCCTGTG...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR GCA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAACTCCCACTGAAGATCTaGTTCCACAGGGAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: NFTKYEKVVEWESSGPPKLPLKI*FHREQT Trigger: TGTTTGCTCCCTGTGGAAGCAGATCTTCAGTGGGAG...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCATCATTATTGATGTCATaGTTGCAGGGCTGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQQNIQSLSICTDPLTSASLLMS*LQGCSF Trigger: GAAAGAGCAGCCCTGCAACCATGACATCAATAATGA...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS CCA 90 bp | ATCCAGGAAGTCAATCAGCTCGATCTCAAACAGGACGGTGGCATTTaGCGGGATGAGGGGAGGGCACCCCAGGGTGCCGTAAGCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQEVNQLDLKQDGGI*RDEGRAPQGAVSIG Trigger: GCCTATGCTTACGGCACCCTGGGGTGCCCTCCCCTCATCCCGCCAAATGCCACCGTCCTGTTTGAGATCGAGCTGATTGACTTCCTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 90 bp | GACAGGTTAAGGAGGACTAGAAGCACGGCAGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAATCGTCGGTGGAGCAGCAGCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRLRRTRSTAGSTKC*SSQVANRRWSSSKA Trigger: GGCTTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGCCGTGCTTCTAGTCCTCCTTAACCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS GCA 90 bp | GACAGGTTAAGGAGGACTAGAAGCACGGCAGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAATCGTCGGTGGAGCAGCAGCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRLRRTRSTAGSTKC*SSQVANRRWSSSKA Trigger: TGCTTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGCCGTGCTTCTAGTCCTCCTTAACCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCAGCCTTGGCGTTCCTTTaGTCAATGAGCAGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAALAFL*SMSRAC Trigger: GCAGGCTCTGCTCATTGACAAAAGGAACGCCAAGGC...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTCTCAGTGGCGAGCGAGAGCCGTGAGAAGGAGCATCTCCCCAATGGACCACCTGAAGAGGGCCTaGGCGTTCCTTTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CCSQWRARAVRRSISPMDHLKRA*AFLLSM Trigger: CATTGACAAAAGGAACGCCAAGGCCCTCTTCAGGTG...GTCCATTGGGGAGATGCTCCTTCTCACGGCTCTCGCTCGCCACTGAGAACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS GCA 90 bp | AAGGACAGGTTAAGGAGGACTAGAAGCACGGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCCAATCGTCGGTGGAGCAGCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDRLRRTRSTAGSTK*CSSQVANRRWSSSK Trigger: TTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGCCGTGCTTCTAGTCCTCCTTAACCTGTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTAACAGTCAGGGCTGGCAGGGTGTCTGTCTTCCAGAGGTGTCTGGAGCACACCTGAAGAGGGCCTaGGCGTTCCTTTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WSNSQGWQGVCLPEVSGAHLKRA*AFLLSM Trigger: CATTGACAAAAGGAACGCCAAGGCCCTCTTCAGGTG...TGCTCCAGACACCTCTGGAAGACAGACACCCTGCCAGCCCTGACTGTTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | CGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCGCCTTGGCGTTCCTTTaGTCAATGAGCAGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: REKEHLPNGQSLNLWMKAALAFL*SMSRAC Trigger: GCAGGCTCTGCTCATTGACAAAAGGAACGCCAAGGC...GGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGGCCTTGGCGTTCCTTTaGTCAATGAGCAGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SICTDPLTSAVGKEVVVRALAFL*SMSRAC Trigger: GCAGGCTCTGCTCATTGACAAAAGGAACGCCAAGGC...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS CCA 90 bp | CCAATCGTCGGTGGAGCAGCAGCAAAGCCCGCTTGTATCTCACTTTaGCATCACAGAAGCGATTCTGGCGGAAAAGGTAGTTGCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PIVGGAAAKPACISL*HHRSDSGGKGSCQT Trigger: AGTTTGGCAACTACCTTTTCCGCCAGAATCGCTTCTGTGATGCCAAAGTGAGATACAAGCGGGCTTTGCTGCTGCTCCACCGACGATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGCACCTGAAGAGGGCCTaGGCGTTCCTTTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SICTDPLTSAVGKEVVVRHLKRA*AFLLSM Trigger: CATTGACAAAAGGAACGCCAAGGCCCTCTTCAGGTG...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | GAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCAGTCAGTTGCTGCTACTTaGAGGACTTTCTGGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EKEHLPNGQSLNLWMKAQSVAAT*RTFWSG Trigger: TCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGA...CTGGGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | CGTGAGAAGGAGCATCTCCCCAATGGACAGAGCCTGAATCTTTGGATGAAGGCCCGCTTGTATCTCACTTaGGCATCACAGAAGCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: REKEHLPNGQSLNLWMKARLYLT*ASQKRF Trigger: GAATCGCTTCTGTGATGCCAAAGTGAGATACAAGCG...GGCCTTCATCCAAAGATTCAGGCTCTGTCCATTGGGGAGATGCTCCTTCTCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS GCA 90 bp | GCGATTCTGGCGGAAAAGGTAGTTGCCAAACTCCCTCTCAGTTGCTaGTACTTTGAGGACTTTCTGGAGTGGAAACTGTTCTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AILAEKVVAKLPLSC*YFEDFLEWKLFLLL Trigger: GAGCAGCAAGAACAGTTTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTTGGCAACTACCTTTTCCGCCAGAATCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACTCAGTTGCTGCTACTTaGAGGACTTTCTGGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDSVAAT*RTFWSG Trigger: TCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGA...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS TCA 90 bp | TTTTTCAGCTCATTATTGATGTCATGGTTGCAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCCCGGGCCCGCTCATACTCAGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFSSLLMSWLQGCSF*ARTRKSRARSYSVR Trigger: CCTAACTGAGTATGAGCGGGCCCGGGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTGCAACCATGACATCAATAATGAGCTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS TCA 90 bp | CCACATAGTCCCTGTAGTGGCTGGACAGCTTTTTCAGCTCATTATTaGTGTCATGGTTGCAGGGCTGCTCTTTCTGAGCTCGCACTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PHSPCSGWTAFSAHY*CHGCRAALSELALE Trigger: TTCTAGTGCGAGCTCAGAAAGAGCAGCCCTGCAACCATGACATCAATAATGAGCTGAAAAAGCTGTCCAGCCACTACAGGGACTATGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 90 bp | GAAGCGATTCTGGCGGAAAAGGTAGTTGCCAAACTCCCTCTCAGTTaGTGCTACTTTGAGGACTTTCTGGAGTGGAAACTGTTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAILAEKVVAKLPLS*CYFEDFLEWKLFLL Trigger: CAGCAAGAACAGTTTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTTGGCAACTACCTTTTCCGCCAGAATCGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | CAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACCACTTTTTCAGCTCATTATaGATGTCATGGTTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDLPNMNVSSKCSSFSDHFFSSL*MSWLQG Trigger: GCCCTGCAACCATGACATCAATAATGAGCTGAAAAA...GTGGTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | GCTCAGGACCTCCCAAACATGAATGTAAGCTCCAAGTGCTCCTCCTTCAGTGACTTTTTCAGCTCATTATaGATGTCATGGTTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQDLPNMNVSSKCSSFSDFFSSL*MSWLQG Trigger: GCCCTGCAACCATGACATCAATAATGAGCTGAAAAA...GTCACTGAAGGAGGAGCACTTGGAGCTTACATTCATGTTTGGGAGGTCCTGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | TCTATCTGTACTGACCCACTGACATCAGCAGTTGGAAAGGAGGTGGTGGTGAGGTTTTTCAGCTCATTATaGATGTCATGGTTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SICTDPLTSAVGKEVVVRFFSSL*MSWLQG Trigger: GCCCTGCAACCATGACATCAATAATGAGCTGAAAAA...CCTCACCACCACCTCCTTTCCAACTGCTGATGTCAGTGGGTCAGTACAGATAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCATCAGTTGCTGCTACTTaGAGGACTTTCTGGAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TQQNIQSLSICTDPLTSASVAAT*RTFWSG Trigger: TCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGA...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR CAA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCACGCTTGTATCTCACTTaGGCATCACAGAAGCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TQQNIQSLSICTDPLTSARLYLT*ASQKRF Trigger: GAATCGCTTCTGTGATGCCAAAGTGAGATACAAGCG...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044972.11 |
||
| CDS-3UTR CAA 90 bp | AATTTCACAAAGTATGAAAAAGTTGTTGAATGGGAGAGCTCAGGACCTCCCAAACACCTGAAGAGGGCCTaGGCGTTCCTTTTGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: NFTKYEKVVEWESSGPPKHLKRA*AFLLSM Trigger: CATTGACAAAAGGAACGCCAAGGCCCTCTTCAGGTG...TTTGGGAGGTCCTGAGCTCTCCCATTCAACAACTTTTTCATACTTTGTGAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS-3UTR CAA 90 bp | ACCCAACAGAATATACAAAGCCTTTCTATCTGTACTGACCCACTGACATCAGCATTTTTCAGCTCATTATaGATGTCATGGTTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQQNIQSLSICTDPLTSAFFSSL*MSWLQG Trigger: GCCCTGCAACCATGACATCAATAATGAGCTGAAAAA...TGCTGATGTCAGTGGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044972.11 ENSMUST00000201791.4 |
||
| CDS GCA 72 bp | GTTGACTTAGTCGCTCATAGGGAGACTGGCCTAGGATaGCAGCCCCTTCCAGGGCTCCCGGGTCTCGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDLVAHRETGLG*QPLPGLPGLGC Trigger: GCACCCGAGACCCGGGAGCCCTGGAAGGGGCTGGCATCCTAGGCCAGTCTCCCTATGAGCGACTAAGTCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201784.4 |
||
| CDS CCA 72 bp | GTCAATCAGCTCGATCTCAAACAGGACGGTGGCATTTaGCGGGATGAGGGGAGGGCACCCCAGGGTGCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: VNQLDLKQDGGI*RDEGRAPQGAV Trigger: TACGGCACCCTGGGGTGCCCTCCCCTCATCCCGCCAAATGCCACCGTCCTGTTTGAGATCGAGCTGATTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 72 bp | AGGAGGACTAGAAGCACGGCAGGTTCTACCAAGTGCTaGTCCTCACAGGTGGCCAATCGTCGGTGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRTRSTAGSTKC*SSQVANRRWSS Trigger: GCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGCCGTGCTTCTAGTCCTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS CCA 72 bp | ACCAAGTGCTGCTCCTCACAGGTGGCCAATCGTCGGTaGAGCAGCAGCAAAGCAGCTGAGAGTGCACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TKCCSSQVANRR*SSSKAAESAQN Trigger: GTTCTGTGCACTCTCAGCTGCTTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201791.4 |
||
| CDS CAA 72 bp | AGGAGGAGGCAAGCCTGTCCACACCTGAAGAGGGCCTaGGCGTTCCTTTTGTCAATGAGCAGAGCCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRRQACPHLKRA*AFLLSMSRACS Trigger: GGAGCAGGCTCTGCTCATTGACAAAAGGAACGCCAAGGCCCTCTTCAGGTGTGGACAGGCTTGCCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 72 bp | TTAAGGAGGACTAGAAGCACGGCAGGTTCTACCAAGTaGTGCTCCTCACAGGTGGCCAATCGTCGGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRRTRSTAGSTK*CSSQVANRRWS Trigger: GCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGTAGAACCTGCCGTGCTTCTAGTCCTCCTTAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS CCA 72 bp | ACCAAGTGCTGCTCCTCACAGGTGGCCAATCGTCGGTaGAGCAGCAGCAAAGCCCGCTTGTATCTCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TKCCSSQVANRR*SSSKARLYLTL Trigger: CAAAGTGAGATACAAGCGGGCTTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGAGCAGCACTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS CAA 90 bp | TCCTCACAGGTGGCCAATCGTCGGTGGAGCAGCAGCAAAGCCCGCTaGTATCTCACTTTGGCATCACAGAAGCGATTCTGGCGGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSQVANRRWSSSKAR*YLTLASQKRFWRKR Trigger: CCTTTTCCGCCAGAATCGCTTCTGTGATGCCAAAGTGAGATACAAGCGGGCTTTGCTGCTGCTCCACCGACGATTGGCCACCTGTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS CAA 72 bp | GTGGCCAATCGTCGGTGGAGCAGCAGCAAAGCCCGCTaGTATCTCACTTTGGCATCACAGAAGCGATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VANRRWSSSKAR*YLTLASQKRFW Trigger: CCAGAATCGCTTCTGTGATGCCAAAGTGAGATACAAGCGGGCTTTGCTGCTGCTCCACCGACGATTGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS TCA 72 bp | TCATTATTGATGTCATGGTTGCAGGGCTGCTCTTTCTaGGCTCGCACTAGAAAATCCCGGGCCCGCTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLMSWLQGCSF*ARTRKSRARSY Trigger: GTATGAGCGGGCCCGGGATTTTCTAGTGCGAGCTCAGAAAGAGCAGCCCTGCAACCATGACATCAATAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 72 bp | CTCCCACTGAAGATCTGCTTCCACAGGGAGCAAACATaGGGTGACACATCTCTCTCTCTCTGTCCACATAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPLKICFHREQT*GDTSLSLCPHS Trigger: ACTATGTGGACAGAGAGAGAGAGATGTGTCACCGCATGTTTGCTCCCTGTGGAAGCAGATCTTCAGTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 ENSMUST00000201791.4 |
||
| CDS GCA 72 bp | CTGGCGGAAAAGGTAGTTGCCAAACTCCCTCTCAGTTaGTGCTACTTTGAGGACTTTCTGGAGTGGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LAEKVVAKLPLS*CYFEDFLEWKL Trigger: CAGTTTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTTTGGCAACTACCTTTTCCGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||
| CDS CCA 72 bp | AACTCCCTCTCAGTTGCTGCTACTTTGAGGACTTTCTaGAGTGGAAACTGTTCTTGCTGCTCAGCTGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: NSLSVAATLRTF*SGNCSCCSAES Trigger: ACTCTCAGCTGAGCAGCAAGAACAGTTTCCACTCCAGAAAGTCCTCAAAGTAGCAGCAACTGAGAGGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044972.11 ENSMUST00000201534.2 ENSMUST00000201784.4 |
||