Pregenerated sensors for FKBP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024222Ensembl transcript IDs: ENSMUST00000079413.11, ENSMUST00000114792.8, ENSMUST00000153744.2, ENSMUST00000177939.8, ENSMUST00000233102.2, ENSMUST00000233291.2, ENSMUST00000233870.2
Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGCGGGTGGGAGCATGAGGCTGAGCAGCTGTGCTGGGCAGGGATaGCTGAGCGCTAACATCGTCCTTGAGTGGGGCAGACAGCGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GAGGSMRLSSCAGQG*LSANIVLEWGRQRE Trigger: TTCCCGCTGTCTGCCCCACTCAAGGACGATGTTAGCGCTCAGCCATCCCTGCCCAGCACAGCTGCTCAGCCTCATGCTCCCACCCGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CCA 90 bp | GGGCTGGAAGTGAGCTGTCCAGGCAGAGGTGCATGGGTCATTGGGTaGTGGGTGTGTCCCCATGGGGGTTCCTTAGGCTGTGGAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: GLEVSCPGRGAWVIG*WVCPHGGSLGCGEA Trigger: GGCTTCTCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCACTTCCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR GCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTaGTTCGAGCAGAGCAGAACTGGAGCCTCAGAAGCGCTGTCCCGC | + |
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Preference number: 1 (lower is better) Translates to: EGPSHIPDSFTTHPS*FEQSRTGASEALSR Trigger: GCGGGACAGCGCTTCTGAGGCTCCAGTTCTGCTCTGCTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CCA 90 bp | CTGGAAGTGAGCTGTCCAGGCAGAGGTGCATGGGTCATTGGGTGGTaGGTGTGTCCCCATGGGGGTTCCTTAGGCTGTGGAGAAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LEVSCPGRGAWVIGW*VCPHGGSLGCGEAS Trigger: GCTGGCTTCTCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCACTTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CCA 90 bp | CAGTGGTCCTTAGGGCTGGAAGTGAGCTGTCCAGGCAGAGGTGCATaGGTCATTGGGTGGTGGGTGTGTCCCCATGGGGGTTCCTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: QWSLGLEVSCPGRGA*VIGWWVCPHGGSLG Trigger: GCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCACTTCCAGCCCTAAGGACCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CCA 90 bp | CTTAGGGCTGGAAGTGAGCTGTCCAGGCAGAGGTGCATGGGTCATTaGGTGGTGGGTGTGTCCCCATGGGGGTTCCTTAGGCTGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LRAGSELSRQRCMGH*VVGVSPWGFLRLWR Trigger: TCTCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCACTTCCAGCCCTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CCA 90 bp | TCCAGGCAGAGGTGCATGGGTCATTGGGTGGTGGGTGTGTCCCCATaGGGGTTCCTTAGGCTGTGGAGAAGCCAGCCACGTTCAATCATC | + |
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Preference number: 1 (lower is better) Translates to: SRQRCMGHWVVGVSP*GFLRLWRSQPRSII Trigger: GATGATTGAACGTGGCTGGCTTCTCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR TCA 90 bp | GCTGAGCAAGCCATGATGAGCAAACCAGTAAGCAGCACTCCTCCCTaGCCTCTGCATCAGCTTCTGCCTGCAGCTTCCTGCCCTGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: AEQAMMSKPVSSTPP*PLHQLLPAASCPVG Trigger: TCCAACAGGGCAGGAAGCTGCAGGCAGAAGCTGATGCAGAGGTCAGGGAGGAGTGCTGCTTACTGGTTTGCTCATCATGGCTTGCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR CCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATaGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCC | + |
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Preference number: 1 (lower is better) Translates to: FTGMLCWTLKGDKLK*AGLSCWPGLFTPAA Trigger: GGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR GCA 90 bp | TGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACTGAGCTaGTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: CWTLKGDKLKWAGLS*WPGLFTPAAFSAVS Trigger: GGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR CCA 90 bp | TGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACTGAGCTGCTaGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: WTLKGDKLKWAGLSC*PGLFTPAAFSAVSW Trigger: CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR TCA 90 bp | GAAAGTGTAGCAGGCTTCCTGAGGGCGACTTTGGAAGCACTGAGATaGCAGCCAACAGGAGAGGCAGTGACAACACAATGGGCTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ESVAGFLRATLEALR*QPTGEAVTTQWAPE Trigger: CTCTGGAGCCCATTGTGTTGTCACTGCCTCTCCTGTTGGCTGTCATCTCAGTGCTTCCAAAGTCGCCCTCAGGAAGCCTGCTACACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR CCA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTaGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RDCNKPYTKHCSVLS*RRAQRGGPSSLGLS Trigger: AGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCACCTATAATGAGATCTaGGACCCTCTTCTGGGGTGTCTGAAGACAACTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTTYNEI*DPLLGCLKTTTVYL Trigger: TAAGTACACTGTAGTTGTCTTCAGACACCCCAGAAGAGGGTCTCAGATCTCATTATAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR GCA 90 bp | CCCGCAGCAGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTaGTTCCAGAATCACAGAGACTGTAACAAACCTTACACTAAACAC | + |
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Preference number: 1 (lower is better) Translates to: PAAAGGHLGSYWYAI*FQNHRDCNKPYTKH Trigger: GTGTTTAGTGTAAGGTTTGTTACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCTGCTGCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR GCA 90 bp | TGCCCTGTTGGAGTTCCTGTCCTGACTTCTTTCAATGATGAACAGTaGTGTGGAAGTGTAAGCCAAATAAACCTTTTCTTCCCCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: CPVGVPVLTSFNDEQ*CGSVSQINLFFPNL Trigger: CAAGTTGGGGAAGAAAAGGTTTATTTGGCTTACACTTCCACAGCACTGTTCATCATTGAAAGAAGTCAGGACAGGAACTCCAACAGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR TCA 90 bp | TTCATCACAGCAATAGAAACTCTAACTAGGACACCTCCCAACTGCTaGGAAGATAGGTGTGTGCCATTATGCTGGCTTATGTTTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: FITAIETLTRTPPNC*EDRCVPLCWLMFLC Trigger: ACAGAGAAACATAAGCCAGCATAATGGCACACACCTATCTTCTCAGCAGTTGGGAGGTGTCCTAGTTAGAGTTTCTATTGCTGTGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR CCA 90 bp | TTACACTATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATaGACCATGTTTGCCATGTTTATTGTGAAATATAAAAACAGAATC | + |
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Preference number: 1 (lower is better) Translates to: LHYGPKRTTETPRDP*TMFAMFIVKYKNRI Trigger: GATTCTGTTTTTATATTTCACAATAAACATGGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATAGTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCTGGGCTGGACTGAGCTaGTGGCCTGGTCTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSWAGLS*WPGLFT Trigger: TGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCA...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAGCTGAGCAGCTGTGCTaGGCAGGGATGGCTGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: PSHTSLLGPQYALGRQLEAEQLC*AGMAER Trigger: GCGCTCAGCCATCCCTGCCCAGCACAGCTGCTCAGC...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGGCTGGACTGAGCTGCTaGCCTGGTCTCTTCACACCA | + |
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Preference number: 2 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEAGLSC*PGLFTP Trigger: TGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGC...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACAGCAAGGGTGCGGGTaGGAGCATGAGGCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PSHTSLLGPQYALGRQLEQQGCG*EHEAEQ Trigger: CTGCTCAGCCTCATGCTCCCACCCGCACCCTTGCTG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGAGGTGCATGGGTCATTaGGTGGTGGGTGTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: EGPSHIPDSFTTHPSCFERCMGH*VVGVSP Trigger: TGGGGACACACCCACCACCCAATGACCCATGCACCT...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAATCTGCACAGCAAGGGTaGGGGTGGGAGCATGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PSHTSLLGPQYALGRQLESAQQG*GWEHEA Trigger: AGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGA...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTATTCTCTGCTGTTTCCTaGCATGTCCCCCACCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVFSAVS*HVPHPH Trigger: GTGGGGGTGGGGGACATGCCAGGAAACAGCAGAGAA...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAAGCCTTAGGTTCTGCACAGCAAGGGTGCGGGTGGGAGCATGAGGCTGAGGGTGACAAACTGAAATaGGCTGGACTGAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EQALGSAQQGCGWEHEAEGDKLK*AGLSCW Trigger: CCAGCAGCTCAGTCCAGCCCATTTCAGTTTGTCACC...CTCAGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGAACCTAAGGCTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAGGACCAGGGAGCCCCTaGCTGTGGGCTTGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PSHTSLLGPQYALGRQLEGPGSP*LWACVL Trigger: AAGAACACAAGCCCACAGCCAGGGGCTCCCTGGTCC...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAACAGCAAGGGTGCGGGTaGGAGCATGAGGCTGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKQQGCG*EHEAEQ Trigger: CTGCTCAGCCTCATGCTCCCACCCGCACCCTTGCTG...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCACCAGGCAGAGGTGCATaGGTCATTGGGTGGTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FCFETGPPRSRDQGCVSPPGRGA*VIGWWV Trigger: CACCCACCACCCAATGACCCATGCACCTCTGCCTGG...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTTTGGAGACTTTGGCTTaGTGCATGGACACCGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RLKFQPGLPGAARLVKRTLETLA*CMDTGS Trigger: GCTTCCGGTGTCCATGCATCAAGCCAAAGTCTCCAA...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAAGCCTTAGGTTCTGCACAGCAAGGGTGCGGGTGGGAGCATGAGGCTGAGTTCACAGGGATGCTGTaGTGGACACTGAAAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: EQALGSAQQGCGWEHEAEFTGML*WTLKGD Trigger: GTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA...CTCAGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGAACCTAAGGCTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAATCTGCACAGCAAGGGTaGGGGTGGGAGCATGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKSAQQG*GWEHEA Trigger: AGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGA...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTGGTGACAAACTGAAATaGGCTGGACTGAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLKFQPGLPGAARLVKRTGDKLK*AGLSCW Trigger: CCAGCAGCTCAGTCCAGCCCATTTCAGTTTGTCACC...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGAAGAACCCACAGCAGCTaGGCCCTAGGTTCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGRTHSS*ALGSQG Trigger: TCCCTGTGAACCTAGGGCCCAGCTGCTGTGGGTTCT...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGTCTGTGGGACATGCTaGCTAGGACAGAAAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: AWTPEARNPYSSHQNTEAVCGTC*LGQKAT Trigger: TGTGGCTTTCTGTCCTAGCCAGCATGTCCCACAGAC...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGTTCGTCAATCCTGGGTaGACATGGATGTCCGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEFVNPG*TWMSVH Trigger: GTGGACGGACATCCATGTCCACCCAGGATTGACGAA...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCACTCTGCACTTCCTGGTaGGACCAGGGCTCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: FCFETGPPRSRDQGCVSPLCTSW*DQGSQT Trigger: TGTTTGAGAGCCCTGGTCTCACCAGGAAGTGCAGAG...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGTTCACAGGGATGCTGTaGTGGACACTGAAAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEFTGML*WTLKGD Trigger: GTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTCCACACTCAAGAGTCTaGGAAAGGACTTGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RLKFQPGLPGAARLVKRTPHSRV*ERTWKA Trigger: TGCCTTCCAAGTCCTTTCGCAGACTCTTGAGTGTGG...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGCAGCAGGTGGTCATTTaGGAAGCTACTGGTATGCCA | + |
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Preference number: 2 (lower is better) Translates to: TELLAWSLHTSGLLCCFLQQVVI*EATGMP Trigger: TGGCATACCAGTAGCTTCCCAAATGACCACCTGCTG...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGCAGCAGGTGGTCATTTaGGAAGCTACTGGTATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEQQVVI*EATGMP Trigger: TGGCATACCAGTAGCTTCCCAAATGACCACCTGCTG...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGACAAACTGAAATGGGCTaGACTGAGCTGCTGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGQTEMG*TELLAW Trigger: CCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGTTTG...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGAACAACAGAGTCTGTaGGACATGCTGGCTAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: AWTPEARNPYSSHQNTEAEQQSL*DMLART Trigger: TGTCCTAGCCAGCATGTCCCACAGACTCTGTTGTTC...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTATTCGTCAATCCTGGGTaGACATGGATGTCCGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVFVNPG*TWMSVH Trigger: GTGGACGGACATCCATGTCCACCCAGGATTGACGAA...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTGCTCTCAAACATGGATaGAAAGAGGCAGAGTGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: RLKFQPGLPGAARLVKRTALKHG*KEAECR Trigger: TCGGCACTCTGCCTCTTTCCATCCATGTTTGAGAGC...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCATTGGAGACTTTGGCTTaGTGCATGGACACCGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FCFETGPPRSRDQGCVSPLETLA*CMDTGS Trigger: GCTTCCGGTGTCCATGCATCAAGCCAAAGTCTCCAA...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACTGAGCTaGTGGCCTGGTCTCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKWAGLS*WPGLFT Trigger: TGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCA...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATTCTCTGCTGTTTCCTaGCATGTCCCCCACCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKFSAVS*HVPHPH Trigger: GTGGGGGTGGGGGACATGCCAGGAAACAGCAGAGAA...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCATTCGTCAATCCTGGGTaGACATGGATGTCCGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: FCFETGPPRSRDQGCVSPFVNPG*TWMSVH Trigger: GTGGACGGACATCCATGTCCACCCAGGATTGACGAA...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATCTGCATCAAAGGGCTTCTCACACTACAGCCCCTACAGCACTGGTCTAGCCGAATCATGGGGCTGGTaGCATGGCTCAGTGGTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSASKGFSHYSPYSTGLAESWGW*HGSVVK Trigger: CTTAACCACTGAGCCATGTCACCAGCCCCATGATTC...GGCTAGACCAGTGCTGTAGGGGCTGTAGTGTGAGAAGCCCTTTGATGCAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGTCGGAAACTGCACCTGAGGATCAAACTCACTCTGTGGATGCCAGGGAAGAATGGGCTCCAGAGATaGCTGTCACTGATGCCCACG | + |
|
Preference number: 2 (lower is better) Translates to: YSRKLHLRIKLTLWMPGKNGLQR*LSLMPT Trigger: CGTGGGCATCAGTGACAGTCATCTCTGGAGCCCATT...CTTCCCTGGCATCCACAGAGTGAGTTTGATCCTCAGGTGCAGTTTCCGACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTGCTTCTGACCCCACTGCTTCCAATCTGCCAAGTGCTGGCATTACAGTCGTTGGAAGCACTGAGATaGCAGCCAACAGGAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLTPLLPICQVLALQSLEALR*QPTGEA Trigger: TGCCTCTCCTGTTGGCTGTCATCTCAGTGCTTCCAA...CGACTGTAATGCCAGCACTTGGCAGATTGGAAGCAGTGGGGTCAGAAGCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGTACTGGTATGCCATTTaGTTCCAGAATCACAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWYWYAI*FQNHRD Trigger: GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTA...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATACTGGTATGCCATTTaGTTCCAGAATCACAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ELLAWSLHTSGLLCCFLAYWYAI*FQNHRD Trigger: GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTA...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTGGGAAGCTACTGGTATaGCATTTGCTTCCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: TEMGWTELLAWSLHTSGLGKLLV*HLLPES Trigger: TGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCC...AAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTGGGCTAGTGATCCTGCATCAGCTTCTGCCTaGAGCTTCCTGCCCTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WLIGENHCGCCHPWASDPASASA*SFLPCW Trigger: CCAACAGGGCAGGAAGCTGCAGGCAGAAGCTGATGC...AGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGATTCTCTGCTGTTTCCTaGCATGTCCCCCACCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGFSAVS*HVPHPH Trigger: GTGGGGGTGGGGGACATGCCAGGAAACAGCAGAGAA...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTAACAGGGATGCTGTGCTaGACACTGAAAGGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVTGMLC*TLKGDK Trigger: TTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGT...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR TCA 90 bp | CATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAAAGAGTACAGCCACACATCTTaGGCACAGTGGTCCTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: HTSLLGPQYALGRQLEKEYSHTS*AQWSLG Trigger: CCCTAAGGACCACTGTGCTCAAGATGTGTGGCTGTA...CTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATGGACCATGTTTGCCGTCGCGACCAACAGTTaGCTGGCTTCTCTTTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: YGPKRTTETPRDPWTMFAVATNS*LASLCT Trigger: TGTGCAAAGAGAAGCCAGGCAACTGTTGGTCGCGAC...GGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCTCTCACAGAGAAGTCTTACGGCTCAGGAAGCTGTTAAGCATGGGACAGCCCTGCAGATTTTAGGTTaGCAGTGTGAGCGTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PLSQRSLTAQEAVKHGTALQILG*QCEREQ Trigger: TTGCTCACGCTCACACTGGCAACCTAAAATCTGCAG...GGCTGTCCCATGCTTAACAGCTTCCTGAGCCGTAAGACTTCTCTGTGAGAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGAACAGGGATGCTGTGCTaGACACTGAAAGGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGTGMLC*TLKGDK Trigger: TTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGT...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR CAA 90 bp | CCGCCCCTGCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTaGTTTTATCAACGGTTTCTGCAGTGTGACCCTAGTGCCGATGTA | + |
|
Preference number: 2 (lower is better) Translates to: PPLPCPPIGKQRSLS*FYQRFLQCDPSADV Trigger: TACATCGGCACTAGGGTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGCAGGGGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTACTGAGCTGCTGGCCTaGTCTCTTCACACCAGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: AMPTNRKAEITEFVLSTVTELLA*SLHTSG Trigger: GCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCACACTCATTAGTACCCACCGCTCTCACAGAGAAGTCTTACGGCTCAGGATCCCAGCAACCACATaGTGGCTCACAACCACCTAT | + |
|
Preference number: 2 (lower is better) Translates to: QVTLISTHRSHREVLRLRIPATT*WLTTTY Trigger: ATAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAT...CCTGAGCCGTAAGACTTCTCTGTGAGAGCGGTGGGTACTAATGAGTGTGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGATACTGGTATGCCATTTaGTTCCAGAATCACAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGYWYAI*FQNHRD Trigger: GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTA...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAACATTTGGGAAGCTACTaGTATGCCATTTGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKHLGSY*YAICFQ Trigger: CTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATG...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTAGAACCCACAGCAGCTaGGCCCTAGGTTCACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: AMPTNRKAEITEFVLSTVRTHSS*ALGSQG Trigger: TCCCTGTGAACCTAGGGCCCAGCTGCTGTGGGTTCT...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATGGACCATGTTTGCCGGTGACATGGCTCAGTaGTTAAGAGCATTGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YGPKRTTETPRDPWTMFAGDMAQ*LRALTA Trigger: AGCAGTCAATGCTCTTAACCACTGAGCCATGTCACC...GGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCTGCATCAAAGGGCTTCTCACACTACAGCCCCTACAGCACTGGTCTAGCCACACCTAGGGATCCATaGACCATGTTTGCCATGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSASKGFSHYSPYSTGLATPRDP*TMFAMF Trigger: AAACATGGCAAACATGGTCCATGGATCCCTAGGTGT...GGCTAGACCAGTGCTGTAGGGGCTGTAGTGTGAGAAGCCCTTTGATGCAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAAGGGAAGCTACTGGTATaGCATTTGCTTCCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKGKLLV*HLLPES Trigger: TGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCC...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTTCTCTGCTGTTTCCTaGCATGTCCCCCACCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQFSAVS*HVPHPH Trigger: GTGGGGGTGGGGGACATGCCAGGAAACAGCAGAGAA...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAAGAACCCACAGCAGCTaGGCCCTAGGTTCACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTNRKAEITEFVLSTVSARTHSS*ALGSQG Trigger: TCCCTGTGAACCTAGGGCCCAGCTGCTGTGGGTTCT...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTGGGCTAGTGATCCTTATAAGAAAGCTGGCTaGGCAAGCCATGATGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: WLIGENHCGCCHPWASDPYKKAG*ASHDEQ Trigger: TTGCTCATCATGGCTTGCTCAGCCAGCTTTCTTATA...AGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR GCA 90 bp | CATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAAAGAGTACTGGTATGCCATTTaGTTCCAGAATCACAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: HTSLLGPQYALGRQLEKEYWYAI*FQNHRD Trigger: GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTA...CTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGAGGGAAGCTACTGGTATaGCATTTGCTTCCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGGKLLV*HLLPES Trigger: TGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCC...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATTGGGCTGGACTGAGCTaGTGGCCTGGTCTCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LRFALIQCPSFGDFGLMHWAGLS*WPGLFT Trigger: TGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCA...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACCAAACTGAAATGGGCTaGACTGAGCTGCTGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDQTEMG*TELLAW Trigger: CCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGTTTG...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTGGGCTAGTGATCCTGTGTTTTCCTTGAAGTaGCAGGTTTATCTCATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WLIGENHCGCCHPWASDPVFSLK*QVYLIL Trigger: GAGAATGAGATAAACCTGTCACTTCAAGGAAAACAC...AGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCATTTGGGAAGCTACTaGTATGCCATTTGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: AMPTNRKAEITEFVLSTVHLGSY*YAICFQ Trigger: CTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTATCAAAAGAGGTTCAGCAGGTCATCTGCATCAAAGGGCTTCTCACACTACATCCCTGGGAAAATACTaGCTAACTGAGTTAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TIKRGSAGHLHQRASHTTSLGKY*LTELGR Trigger: TCTGCCTAACTCAGTTAGCCAGTATTTTCCCAGGGA...TGTAGTGTGAGAAGCCCTTTGATGCAGATGACCTGCTGAACCTCTTTTGATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGGGGAAGCTACTGGTATaGCATTTGCTTCCAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQGKLLV*HLLPES Trigger: TGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCC...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCCACACTCAAGAGTCTaGGAAAGGACTTGGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LRFALIQCPSFGDFGLMHPHSRV*ERTWKA Trigger: TGCCTTCCAAGTCCTTTCGCAGACTCTTGAGTGTGG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTATCAAAAGAGGTTCAGCAGGTCATCTGCATCAAAGGGCTTCTCACACTACATGCCTGGCTTCTCTTTaGACATCTATCTCTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: TIKRGSAGHLHQRASHTTCLASL*TSISRT Trigger: AGTTCTAGAGATAGATGTGCAAAGAGAAGCCAGGCA...TGTAGTGTGAGAAGCCCTTTGATGCAGATGACCTGCTGAACCTCTTTTGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTATCAAAAGAGGTTCAGCAGGTCATCTGCATCAAAGGGCTTCTCACACTACAGCATCACCTTCACACTaGTACAGAAAGAAGTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: TIKRGSAGHLHQRASHTTASPSH*YRKKLH Trigger: GTGTAACTTCTTTCTGTAGCAGTGTGAAGGTGATGC...TGTAGTGTGAGAAGCCCTTTGATGCAGATGACCTGCTGAACCTCTTTTGATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCATTTGGGAAGCTACTaGTATGCCATTTGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQHLGSY*YAICFQ Trigger: CTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTACTGGTATGCCATTTaGTTCCAGAATCACAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQYWYAI*FQNHRD Trigger: GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTA...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR CCA 72 bp | AGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCCCCTaGCTGTGGGCTTGTGTTCTTAGCAGGCCAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGLRPSCGPGSP*LWACVLSRPVS Trigger: ACTGACTGGCCTGCTAAGAACACAAGCCCACAGCCAGGGGCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | CTGAGACCCAGCTGTGGACCAGGGAGCCCCTGGCTGTaGGCTTGTGTTCTTAGCAGGCCAGTCAGTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRPSCGPGSPWL*ACVLSRPVSQC Trigger: GCACTGACTGACTGGCCTGCTAAGAACACAAGCCCACAGCCAGGGGCTCCCTGGTCCACAGCTGGGTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGGAGGTGCATGGGTCATaGGGTGGTGGGTGTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEEVHGS*GGGCVP Trigger: GGGGACACACCCACCACCCAATGACCCATGCACCTC...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | AGCTGTCCAGGCAGAGGTGCATGGGTCATTGGGTGGTaGGTGTGTCCCCATGGGGGTTCCTTAGGCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCPGRGAWVIGW*VCPHGGSLGCG Trigger: TCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | GTGAGCTGTCCAGGCAGAGGTGCATGGGTCATTGGGTaGTGGGTGTGTCCCCATGGGGGTTCCTTAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VSCPGRGAWVIG*WVCPHGGSLGC Trigger: ACAGCCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | GGAAGTGAGCTGTCCAGGCAGAGGTGCATGGGTCATTaGGTGGTGGGTGTGTCCCCATGGGGGTTCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSELSRQRCMGH*VVGVSPWGFLR Trigger: CCTAAGGAACCCCCATGGGGACACACCCACCACCCAATGACCCATGCACCTCTGCCTGGACAGCTCACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | GTGGTGGGTGTGTCCCCATGGGGGTTCCTTAGGCTGTaGAGAAGCCAGCCACGTTCAATCATCACCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VVGVSPWGFLRL*RSQPRSIITCR Trigger: CCTACAGGTGATGATTGAACGTGGCTGGCTTCTCCACAGCCTAAGGAACCCCCATGGGGACACACCCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTCTACAGCCACACATCTaGAGCACAGTGGTCCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLKFQPGLPGAARLVKRTLQPHI*STVVLR Trigger: CCTAAGGACCACTGTGCTCAAGATGTGTGGCTGTAG...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR TCA 72 bp | GCCATGATGAGCAAACCAGTAAGCAGCACTCCTCCCTaGCCTCTGCATCAGCTTCTGCCTGCAGCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AMMSKPVSSTPP*PLHQLLPAASC Trigger: GCAGGAAGCTGCAGGCAGAAGCTGATGCAGAGGTCAGGGAGGAGTGCTGCTTACTGGTTTGCTCATCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CCA 72 bp | GACAGAAAGCCACACTCAAGAGTCTGCGAAAGGACTTaGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DRKPHSRVCERT*KAGKGPETQLW Trigger: CCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTTCGCAGACTCTTGAGTGTGGCTTTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | GAGGAGTGTGAAGTTCCTTCCTTCGTCAATCCTGGGTaGACATGGATGTCCGTCCACTCGAGTCTGGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: EECEVPSFVNPG*TWMSVHSSLGR Trigger: CCGTCCCAGACTCGAGTGGACGGACATCCATGTCCACCCAGGATTGACGAAGGAAGGAACTTCACACTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTCTCACAGAGAAGTCTTACGGCTCAGGAAGCTGTTAAGCATGGGACAGCCAGTCGCGACCAACAGTaGCCTGGCTTCTCTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLSQRSLTAQEAVKHGTASRDQQ*PGFSLH Trigger: GTGCAAAGAGAAGCCAGGCAACTGTTGGTCGCGACT...GGCTGTCCCATGCTTAACAGCTTCCTGAGCCGTAAGACTTCTCTGTGAGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | CTCAAACATGGATGGAAAGAGGCAGAGTGCCGAGTGTaGGATGCGAGGGTCCCAGTCACATCCCAGACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKHGWKEAECRV*DARVPVTSQTP Trigger: AGGAGTCTGGGATGTGACTGGGACCCTCGCATCTCACACTCGGCACTCTGCCTCTTTCCATCCATGTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR TCA 72 bp | TACACACACAGTCGGCTCCTGCTCTGCACTTCCTGGTaGGACCAGGGCTCTCAAACATGGATGGAAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YTHSRLLLCTSW*DQGSQTWMERG Trigger: GCCTCTTTCCATCCATGTTTGAGAGCCCTGGTCTCACCAGGAAGTGCAGAGCAGGAGCCGACTGTGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR GCA 72 bp | GACGGGCGTTGGAGGAACAACAGAGTCTGTGGGACATaGTGGCTAGGACAGAAAGCCACACTCAAGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DGRWRNNRVCGT*WLGQKATLKSL Trigger: CAGACTCTTGAGTGTGGCTTTCTGTCCTAGCCAGCATGTCCCACAGACTCTGTTGTTCCTCCAACGCCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | CAGCAGCTGGGCCCTAGGTTCACAGGGATGCTGTGCTaGACACTGAAAGGTGACAAACTGAAATGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QQLGPRFTGMLC*TLKGDKLKWAG Trigger: TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCCCAGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR CCA 72 bp | GGGCGTTGGAGGAACAACAGAGTCTGTGGGACATGCTaGCTAGGACAGAAAGCCACACTCAAGAGTCTGCGA | + |
|
Preference number: 3 (lower is better) Translates to: GRWRNNRVCGTC*LGQKATLKSLR Trigger: TCGCAGACTCTTGAGTGTGGCTTTCTGTCCTAGCCAGCATGTCCCACAGACTCTGTTGTTCCTCCAACGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR GCA 72 bp | GGGTCCCTGCAGTTTGTGCCTCTGCAGATTTTAGGTTaGCAGTGTGAGCGTGAGCAAGTGAAAGCGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSLQFVPLQILG*QCEREQVKAAS Trigger: TGATGCCGCTTTCACTTGCTCACGCTCACACTGGCAACCTAAAATCTGCAGAGGCACAAACTGCAGGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CCA 72 bp | TCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATaGACACCGGAAGCCCGCAACCCTTACAGCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SMPKFWRLWLDA*TPEARNPYSSH Trigger: GTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR TCA 72 bp | ACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTaGGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TVTNLTLNTVQS*VGGEPSEEGRV Trigger: AACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTCAGAGATCACTGAGTTaGTTTTATCAACGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AWTPEARNPYSSHQNTEAQRSLS*FYQRFL Trigger: CAGAAACCGTTGATAAAACAAACTCAGTGATCTCTG...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTCAGAGATCACTGAGTTaGTTTTATCAACGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLKFQPGLPGAARLVKRTQRSLS*FYQRFL Trigger: CAGAAACCGTTGATAAAACAAACTCAGTGATCTCTG...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR TCA 72 bp | CCTGACATGAGACTGTCTTACTACAGCCACACATCTTaGGCACAGTGGTCCTTAGGGCTGGAAGTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PDMRLSYYSHTS*AQWSLGLEVSC Trigger: ACAGCTCACTTCCAGCCCTAAGGACCACTGTGCTCAAGATGTGTGGCTGTAGTAAGACAGTCTCATGTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR GCA 72 bp | TCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATaGCCACCAATAGGAAAGCAGAGATCACTGAGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SVLSKSHHPPLP*PPIGKQRSLSL Trigger: CAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | AACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTaGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: NKPYTKHCSVLS*RRAQRGGPSSL Trigger: TAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR CCA 72 bp | AGTCGGAAACTGCACCTGAGGATCAAACTCACTCTGTaGATGCCAGGGAAGCACTCTCACTACAGAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKLHLRIKLTL*MPGKHSHYRTP Trigger: TGGTGTTCTGTAGTGAGAGTGCTTCCCTGGCATCCACAGAGTGAGTTTGATCCTCAGGTGCAGTTTCCGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | TGGGCTAGTGATCCTGGGTTCTATAAGAAAGCTGGCTaGGCAAGCCATGATGAGCAAACCAGTAAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WASDPGFYKKAG*ASHDEQTSKQH Trigger: GTGCTGCTTACTGGTTTGCTCATCATGGCTTGCTCAGCCAGCTTTCTTATAGAACCCAGGATCACTAGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CCA 72 bp | ATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTaGCTTGATGCATGGACACCGGAAGCCCGCAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ICPNSMPKFWRL*LDAWTPEARNP Trigger: AGGGTTGCGGGCTTCCGGTGTCCATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CCA 72 bp | GTGTGCCATTATGCTGGCTTATGTTTCTCTGTTCTGTaGTCAACTGAACACCTCTGTGCTTCTGACCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: VCHYAGLCFSVL*STEHLCASDPT Trigger: AGTGGGGTCAGAAGCACAGAGGTGTTCAGTTGACCACAGAACAGAGAAACATAAGCCAGCATAATGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CCA 72 bp | TTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTaGGCTAGTGATCCTGGGTTCTATAAGAAAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LIGENHCGCCHP*ASDPGFYKKAG Trigger: GCCAGCTTTCTTATAGAACCCAGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGATAGGTGTGTGCCATTATGCTGGCTTATGTTTCTCTGTTCTGTGGTCAACAGTCATCGTCTGCCTTaGCAAGGAAGAATGGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: EDRCVPLCWLMFLCSVVNSHRLP*QGRMVF Trigger: GAACACCATTCTTCCTTGCAAAGGCAGACGATGACT...GTTGACCACAGAACAGAGAAACATAAGCCAGCATAATGGCACACACCTATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | GCTGCAACGGCAACAACATCTGTCGGGTGTTTTCCTTaGAGTGACAGGTTTATCTCATTCTCCTTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AATATTSVGCFP*SDRFISFSFRK Trigger: TTTCCTGAAGGAGAATGAGATAAACCTGTCACTTCAAGGAAAACACCCGACAGATGTTGTTGCCGTTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | GCAATAGAAACTCTAACTAGGACACCTCCCAACTGCTaGGAAGATAGGTGTGTGCCATTATGCTGGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: AIETLTRTPPNC*EDRCVPLCWLM Trigger: CATAAGCCAGCATAATGGCACACACCTATCTTCTCAGCAGTTGGGAGGTGTCCTAGTTAGAGTTTCTATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR GCA 72 bp | GCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTaGTTCCAGAATCACAGAGACTGTAACAAACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AGGHLGSYWYAI*FQNHRDCNKPY Trigger: GTAAGGTTTGTTACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR GCA 72 bp | AACCTAGCTCTTATTTCCACAGTCGCGACCAACAGTTaGCTGGCTTCTCTTTGCACATCTATCTCTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: NLALISTVATNS*LASLCTSISRT Trigger: AGTTCTAGAGATAGATGTGCAAAGAGAAGCCAGGCAACTGTTGGTCGCGACTGTGGAAATAAGAGCTAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CCA 72 bp | GGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATaGACCATGTTTGCCATGTTTATTGTGAAATATAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPKRTTETPRDP*TMFAMFIVKYK Trigger: TTTATATTTCACAATAAACATGGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | TATAAGCCAAGAGGAAGTCATTTGCTTGCTTCTGACTaGAGATGTAGAAAAGAACAAACTCACAAGGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: YKPRGSHLLASD*RCRKEQTHKDL Trigger: CAGGTCCTTGTGAGTTTGTTCTTTTCTACATCTTCAGTCAGAAGCAAGCAAATGACTTCCTCTTGGCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR TCA 72 bp | AATTTCCCATCTTATCCAGTCTTATGCCCAGTTATATaGAGTATATTCATAATGGGTTACTGTCAGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: NFPSYPVLCPVI*SIFIMGYCQLQ Trigger: TTGTAGCTGACAGTAACCCATTATGAATATACTTCATATAACTGGGCATAAGACTGGATAAGATGGGAAATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATGTCCCCCACCCCCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFTPAAFSAVSWHVPHPRSRSL*SFAFLW Trigger: CCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCG...GGGGTGGGGGACATGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWRSRSL*SFAFLW Trigger: CCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCG...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCACCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLAPSSGT*RSAGER Trigger: CCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGG...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR GCA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGTGTTGGCGTACACCCTaGGGTCCCGCTCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGPSHIPDSFTTHPSCFECWRTP*GPARCA Trigger: AGCACAACGAGCGGGACCGCAGGGTGTACGCCAACA...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGTGTTGGCGTACACCCTaGGGTCCCGCTCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TELLAWSLHTSGLLCCFLCWRTP*GPARCA Trigger: AGCACAACGAGCGGGACCGCAGGGTGTACGCCAACA...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCTGAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCCCTGCTCAGTCATGGTaGCTGCTGGGTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSWRRAQRGGPSSLGLPAQSW*LLGSLH Trigger: ATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGG...GAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTCACCCTGCTCAGTCATaGTGGCTGCTGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEAHPAQS*WLLGSL Trigger: GAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTG...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCTCATTCATGAGCAGCTaGGCCTCGCCCCTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSSFMSS*ASPLLY Trigger: GTACAGAAGGGGCGAGGCCCAGCTGCTCATGAATGA...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTTGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLKFQPGLPGAARLVKRTCSQLC*LPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCA...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGTGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TELLAWSLHTSGLLCCFLCSQLC*LPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCA...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATCCTTCGTTTGGGTTTaGGTATCCCTCGCCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLASFVWV*VSLAFP Trigger: CGGAAAGGCGAGGGATACTCAAACCCAAACGAAGGA...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWALRTS*TCWRTP Trigger: GGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGC...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: ELEASPARRAEFIRTLFPALRTS*TCWRTP Trigger: GGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGC...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR GCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAACGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKRSRSL*SFAFLW Trigger: CCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCG...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR GCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGATGTTGGCGTACACCCTaGGGTCCCGCTCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGCWRTP*GPARCA Trigger: AGCACAACGAGCGGGACCGCAGGGTGTACGCCAACA...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCCAGCAGCCTTCCAGGTaGACTTTTACCGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSQQPSR*TFTVAP Trigger: AGGAGCAACGGTAAAAGTCCACCTGGAAGGCTGCTG...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATGTCCCCCACCCCCCTTCTCTTTCACGATaGCAGCCTGCGTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFTPAAFSAVSWHVPHPPSLSR*QPASAF Trigger: AAAAGCTGACGCAGGCTGCCATCGTGAAAGAGAAGG...GGGGTGGGGGACATGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCAAATTCCAGCCCGGCCTCCCTGGCGCTGCAAGGCTAGTGAAGAGAACTTCATTCATGAGCAGCTaGGCCTCGCCCCTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLKFQPGLPGAARLVKRTSFMSS*ASPLLY Trigger: GTACAGAAGGGGCGAGGCCCAGCTGCTCATGAATGA...AGTTCTCTTCACTAGCCTTGCAGCGCCAGGGAGGCCGGGCTGGAATTTGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGACCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGPSSGT*RSAGER Trigger: CCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGG...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTTCCTTCGTTTGGGTTTaGGTATCCCTCGCCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEASFVWV*VSLAFP Trigger: CGGAAAGGCGAGGGATACTCAAACCCAAACGAAGGA...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTTCCTTCGTTTGGGTTTaGGTATCCCTCGCCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSSFVWV*VSLAFP Trigger: CGGAAAGGCGAGGGATACTCAAACCCAAACGAAGGA...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | GGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATGTCCCCCACCCCTGTACTTGCCTCCCTTaGAGTACACAGTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFTPAAFSAVSWHVPHPCTCLP*STQFPS Trigger: AGAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACA...GGGGTGGGGGACATGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR TCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSPCSED*LPTPSR Trigger: TCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGG...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR TCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTCCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEAPSSMA*LSCCLP Trigger: TGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGG...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTCCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSPSSMA*LSCCLP Trigger: TGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGG...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR GCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCAGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLAVISSP*SVMVAA Trigger: AGCAGCCACCATGACTGAGCAGGGTGAAGATATCAC...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR GCA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSVISSP*SVMVAA Trigger: AGCAGCCACCATGACTGAGCAGGGTGAAGATATCAC...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCAGGCTTTGATAACCTaGCCTTGGCCAAGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWQALIT*PWPRLK Trigger: CTTTAGCCTTGGCCAAGGCCAGGTTATCAAAGCCTG...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTCAGCAGCCTTCCAGGTaGACTTTTACCGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSQQPSR*TFTVAP Trigger: AGGAGCAACGGTAAAAGTCCACCTGGAAGGCTGCTG...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTCCTTCTCTTTCACGATaGCAGCCTGCGTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELEASPARRAEFIRTLFPPSLSR*QPASAF Trigger: AAAAGCTGACGCAGGCTGCCATCGTGAAAGAGAAGG...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGTTCACGATGGCAGCCTaGGTCAGCTTTTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TELLAWSLHTSGLLCCFLFTMAA*VSFSLV Trigger: CACCAAAGAAAAGCTGACGCAGGCTGCCATCGTGAA...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR GCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTTTCACGATGGCAGCCTaGGTCAGCTTTTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSFTMAA*VSFSLV Trigger: CACCAAAGAAAAGCTGACGCAGGCTGCCATCGTGAA...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCAAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLASHGGC*VLSIVT Trigger: AGTAACAATGGAGAGAACCCAGCAGCCACCATGACT...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ELEASPARRAEFIRTLFPSHGGC*VLSIVT Trigger: AGTAACAATGGAGAGAACCCAGCAGCCACCATGACT...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTCCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEAPIGMS*SSPSPT Trigger: TGTTGGGGAAGGAGAAGACCACGACATTCCGATTGG...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAATGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKCSQLC*LPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCA...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CAA 72 bp | CATGGGGCTGGTGACATGGCTCAGTGGTTAAGAGCATaGACTGCTCTTCCGCAGGTCCCGAGTTCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGAGDMAQWLRA*TALPQVPSSNP Trigger: GGGATTTGAACTCGGGACCTGCGGAAGAGCAGTCAATGCTCTTAACCACTGAGCCATGTCACCAGCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTTGTACTTGCCTCCCTTaGAGTACACAGTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSCTCLP*STQFPS Trigger: AGAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACA...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSHTSLLGPQYALGRQLEALRTS*TCWRTP Trigger: GGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGC...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCACCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCFETGPPRSRDQGCVSPPSSMA*LSCCLP Trigger: TGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGG...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTTTGCGTCCCGCTCTaGGAACTTCTTGAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEMGWTELLAWSLHTSGLLCVPL*ELLEHV Trigger: AACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAG...AAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTTCTGACCCCACTGCTTCCAATCTGCCAAGTGCTGGCATTACAGTCGCCTGCTCAGTCATGGTaGCTGCTGGGTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTPLLPICQVLALQSPAQSW*LLGSLH Trigger: ATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGG...CGACTGTAATGCCAGCACTTGGCAGATTGGAAGCAGTGGGGTCAGAAGCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CCA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTACAGGCTTTGATAACCTaGCCTTGGCCAAGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVQALIT*PWPRLK Trigger: CTTTAGCCTTGGCCAAGGCCAGGTTATCAAAGCCTG...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACAGCAGCCTTCCAGGTaGACTTTTACCGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSHTSLLGPQYALGRQLEQQPSR*TFTVAP Trigger: AGGAGCAACGGTAAAAGTCCACCTGGAAGGCTGCTG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTGCGTCAGCTTTTCTTTaGTGTCCATCTCCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ELEASPARRAEFIRTLFPASAFL*CPSPKI Trigger: AATCTTGGGAGATGGACACCAAAGAAAAGCTGACGC...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCCTGAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCGCGTCAGCTTTTCTTTaGTGTCCATCTCCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SVLSWRRAQRGGPSSLGLASAFL*CPSPKI Trigger: AATCTTGGGAGATGGACACCAAAGAAAAGCTGACGC...GAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGPSSGT*RSAGER Trigger: CCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGG...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAACCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKPCSED*LPTPSR Trigger: TCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGG...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKALRTS*TCWRTP Trigger: GGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGC...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSHTSLLGPQYALGRQLELSHGG*WVLSIV Trigger: AACAATGGAGAGAACCCAGCAGCCACCATGACTGAG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCAGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FCFETGPPRSRDQGCVSPVISSP*SVMVAA Trigger: AGCAGCCACCATGACTGAGCAGGGTGAAGATATCAC...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCATTCACGATGGCAGCCTaGGTCAGCTTTTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FCFETGPPRSRDQGCVSPFTMAA*VSFSLV Trigger: CACCAAAGAAAAGCTGACGCAGGCTGCCATCGTGAA...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTTGGCGTACACCCTaGGGTCCCGCTCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHLGSYWYAICFQNHRDCWRTP*GPARCA Trigger: AGCACAACGAGCGGGACCGCAGGGTGTACGCCAACA...GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAACCTGCTCAGTCATGGTaGCTGCTGGGTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKPAQSW*LLGSLH Trigger: ATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGG...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PSHTSLLGPQYALGRQLEPIGMS*SSPSPT Trigger: TGTTGGGGAAGGAGAAGACCACGACATTCCGATTGG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACCTTCTCTTTCACGATaGCAGCCTGCGTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSHTSLLGPQYALGRQLEPSLSR*QPASAF Trigger: AAAAGCTGACGCAGGCTGCCATCGTGAAAGAGAAGG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGCCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQPSSGT*RSAGER Trigger: CCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGG...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTGCATCAAAGGGCTTCTCACACTACAGCCCCTACAGCACTGGTCTAGCCGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSASKGFSHYSPYSTGLAVISSP*SVMVAA Trigger: AGCAGCCACCATGACTGAGCAGGGTGAAGATATCAC...GGCTAGACCAGTGCTGTAGGGGCTGTAGTGTGAGAAGCCCTTTGATGCAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAATTCACGATGGCAGCCTaGGTCAGCTTTTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKFTMAA*VSFSLV Trigger: CACCAAAGAAAAGCTGACGCAGGCTGCCATCGTGAA...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCACTTTGCGTCCCGCTCTaGGAACTTCTTGAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FCFETGPPRSRDQGCVSPLCVPL*ELLEHV Trigger: AACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAG...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGACACCCTGCTCAGTCATaGTGGCTGCTGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGHLGSYWYAICFQNHRHPAQS*WLLGSL Trigger: GAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTG...TCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWKAKGK*LLSVMT Trigger: AGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTT...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSKAKGK*LLSVMT Trigger: AGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTT...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTAGCGTCAGCTTTTCTTTaGTGTCCATCTCCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVASAFL*CPSPKI Trigger: AATCTTGGGAGATGGACACCAAAGAAAAGCTGACGC...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGTGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQCSQLC*LPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCA...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGGCTTCTTTCTGTCATaGCTGGAATCAAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEAGFFLS*LESNFF Trigger: AAAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCC...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCAATAAATCCTCACCTTTaGAATCAAGGAGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLAINPHL*NQGAQS Trigger: AGATTGAGCTCCTTGATTTCAAAGGTGAGGATTTAT...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR TCA 90 bp | GAGCAAGCCTTAGGTTCTGCACAGCAAGGGTGCGGGTGGGAGCATGAGGCTGAGATAAATCCTCACCTTTaGAATCAAGGAGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EQALGSAQQGCGWEHEAEINPHL*NQGAQS Trigger: AGATTGAGCTCCTTGATTTCAAAGGTGAGGATTTAT...CTCAGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGAACCTAAGGCTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAACTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKLSHGG*WVLSIV Trigger: AACAATGGAGAGAACCCAGCAGCCACCATGACTGAG...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | TATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATGGACCATGTTTGCCCTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YGPKRTTETPRDPWTMFALSHGG*WVLSIV Trigger: AACAATGGAGAGAACCCAGCAGCCACCATGACTGAG...GGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQRSRSL*SFAFLW Trigger: CCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGCCTGCTCAGTCATGGTaGCTGCTGGGTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQPAQSW*LLGSLH Trigger: ATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGG...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: AWTPEARNPYSSHQNTEAKAKGK*LLSVMT Trigger: AGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTT...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCAGGTTTACATAATAAATaGCAGATCTCGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELLAWSLHTSGLLCCFLAGLHNK*QISPFF Trigger: GAAGAAAGGCGAGATCTGCCATTTATTATGTAAACC...TGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGCCTTAGGTTCTGCACAGCAAGGGTGCGGGTGGGAGCATGAGGCTGAGGGTTTACATAATAAATaGCAGATCTCGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQALGSAQQGCGWEHEAEGLHNK*QISPFF Trigger: GAAGAAAGGCGAGATCTGCCATTTATTATGTAAACC...CTCAGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGAACCTAAGGCTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACAGCAGCCTTCCAGGTaGACTTTTACCGTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGQQPSR*TFTVAP Trigger: AGGAGCAACGGTAAAAGTCCACCTGGAAGGCTGCTG...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAACCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKPIGMS*SSPSPT Trigger: TGTTGGGGAAGGAGAAGACCACGACATTCCGATTGG...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAAAGAGCCTTCTCTTTCACGATaGCAGCCTGCGTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTSLLGPQYALGRQLEKEPSLSR*QPASAF Trigger: AAAAGCTGACGCAGGCTGCCATCGTGAAAGAGAAGG...CTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTTGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSYWYAICFQNHRDCCSQLC*LPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCA...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR CAA 72 bp | GCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTaGATGCATGGACACCGGAAGCCCGCAACCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ALIQCPSFGDFG*MHGHRKPATLT Trigger: TGTAAGGGTTGCGGGCTTCCGGTGTCCATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGATAAATCCTCACCTTTaGAATCAAGGAGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TELLAWSLHTSGLLCCFLINPHL*NQGAQS Trigger: AGATTGAGCTCCTTGATTTCAAAGGTGAGGATTTAT...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGHLGSYWYAICFQNHRDPCSED*LPTPSR Trigger: TCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGG...GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGLSHGG*WVLSIV Trigger: AACAATGGAGAGAACCCAGCAGCCACCATGACTGAG...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTTGGCGTACACCCTaGGGTCCCGCTCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQCWRTP*GPARCA Trigger: AGCACAACGAGCGGGACCGCAGGGTGTACGCCAACA...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTGGAGGCGACACCCTGCTCAGTCATaGTGGCTGCTGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDCNKPYTKHCSVLSWRRHPAQS*WLLGSL Trigger: GAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTG...TCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | ACTATCAAAAGAGGTTCAGCAGGTCATCTGCATCAAAGGGCTTCTCACACTACACACCCTGCTCAGTCATaGTGGCTGCTGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIKRGSAGHLHQRASHTTHPAQS*WLLGSL Trigger: GAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTG...TGTAGTGTGAGAAGCCCTTTGATGCAGATGACCTGCTGAACCTCTTTTGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| 3UTR CAA 72 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTaGGGAGACAGCTGGAAAAAGAGCTTTCCCGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPIPVSLAHNTH*GDSWKKSFPVK Trigger: TTTTACGGGAAAGCTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGATGTACTTGCCTCCCTTaGAGTACACAGTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGCTCLP*STQFPS Trigger: AGAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACA...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGTTCACGATGGCAGCCTaGGTCAGCTTTTCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQFTMAA*VSFSLV Trigger: CACCAAAGAAAAGCTGACGCAGGCTGCCATCGTGAA...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRFALIQCPSFGDFGLMHRSRSL*SFAFLW Trigger: CCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCCTGCTCAGTCATGGTaGCTGCTGGGTTCTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AMPTNRKAEITEFVLSTVPAQSW*LLGSLH Trigger: ATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGCAGGCTTTGATAACCTaGCCTTGGCCAAGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQQALIT*PWPRLK Trigger: CTTTAGCCTTGGCCAAGGCCAGGTTATCAAAGCCTG...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACCCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GGHLGSYWYAICFQNHRDPIGMS*SSPSPT Trigger: TGTTGGGGAAGGAGAAGACCACGACATTCCGATTGG...GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGCCTTCTCTTTCACGATaGCAGCCTGCGTCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQPSLSR*QPASAF Trigger: AAAAGCTGACGCAGGCTGCCATCGTGAAAGAGAAGG...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTGGAGGCGATCATTCATGAGCAGCTaGGCCTCGCCCCTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RDCNKPYTKHCSVLSWRRSFMSS*ASPLLY Trigger: GTACAGAAGGGGCGAGGCCCAGCTGCTCATGAATGA...TCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACCACCCTGCTCAGTCATaGTGGCTGCTGGGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDHPAQS*WLLGSL Trigger: GAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTG...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRFALIQCPSFGDFGLMHPSSGT*RSAGER Trigger: CCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTTGTACTTGCCTCCCTTaGAGTACACAGTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSYWYAICFQNHRDCCTCLP*STQFPS Trigger: AGAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACA...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQPSSMA*LSCCLP Trigger: TGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCACCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTNRKAEITEFVLSTVSAPSSMA*LSCCLP Trigger: TGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGG...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSYWYAICFQNHRDCSHGGC*VLSIVT Trigger: AGTAACAATGGAGAGAACCCAGCAGCCACCATGACT...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | TATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATGGACCATGTTTGCCAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: YGPKRTTETPRDPWTMFAKAKGK*LLSVMT Trigger: AGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTT...GGCAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGGCGTCAGCTTTTCTTTaGTGTCCATCTCCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRWSFGKLLVCHLLPESQASAFL*CPSPKI Trigger: AATCTTGGGAGATGGACACCAAAGAAAAGCTGACGC...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACTCATTCATGAGCAGCTaGGCCTCGCCCCTTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDSFMSS*ASPLLY Trigger: GTACAGAAGGGGCGAGGCCCAGCTGCTCATGAATGA...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTGGGCTAGTGATCCTGGCTTCTTTCTGTCATaGCTGGAATCAAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLIGENHCGCCHPWASDPGFFLS*LESNFF Trigger: AAAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCC...AGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTGTACTTGCCTCCCTTaGAGTACACAGTTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMPTNRKAEITEFVLSTVCTCLP*STQFPS Trigger: AGAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACA...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDPCSED*LPTPSR Trigger: TCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGG...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDALRTS*TCWRTP Trigger: GGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGC...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQLSHGG*WVLSIV Trigger: AACAATGGAGAGAACCCAGCAGCCACCATGACTGAG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCACTGTTCTTCTCTCTaGATCTTCACCAGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AMPTNRKAEITEFVLSTVHCSSL*IFTRAL Trigger: CAAAGCCCTGGTGAAGATGCAGAGAGAAGAACAGTG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCTTTGCGTCCCGCTCTaGGAACTTCTTGAACATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMPTNRKAEITEFVLSTVLCVPL*ELLEHV Trigger: AACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CCA 90 bp | GAAGATAGGTGTGTGCCATTATGCTGGCTTATGTTTCTCTGTTCTGTGGTCAACAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: EDRCVPLCWLMFLCSVVNSHGGC*VLSIVT Trigger: AGTAACAATGGAGAGAACCCAGCAGCCACCATGACT...GTTGACCACAGAACAGAGAAACATAAGCCAGCATAATGGCACACACCTATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CCA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGAAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGKAKGK*LLSVMT Trigger: AGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTT...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| 3UTR CAA 72 bp | CCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTaGTTTTATCAACGGTTTCTGCAGTGTGACCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCPPIGKQRSLS*FYQRFLQCDPS Trigger: ACTAGGGTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR TCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LRFALIQCPSFGDFGLMHPCSED*LPTPSR Trigger: TCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCACTGTTCTTCTCTCTaGATCTTCACCAGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQHCSSL*IFTRAL Trigger: CAAAGCCCTGGTGAAGATGCAGAGAGAAGAACAGTG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTGGCTTCTTTCTGTCATaGCTGGAATCAAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSYWYAICFQNHRDCGFFLS*LESNFF Trigger: AAAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCC...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRFALIQCPSFGDFGLMHVISSP*SVMVAA Trigger: AGCAGCCACCATGACTGAGCAGGGTGAAGATATCAC...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACCACTGTTCTTCTCTCTaGATCTTCACCAGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDHCSSL*IFTRAL Trigger: CAAAGCCCTGGTGAAGATGCAGAGAGAAGAACAGTG...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDSHGGC*VLSIVT Trigger: AGTAACAATGGAGAGAACCCAGCAGCCACCATGACT...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCGTCAGCTTTTCTTTaGTGTCCATCTCCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PTNRKAEITEFVLSTVSAASAFL*CPSPKI Trigger: AATCTTGGGAGATGGACACCAAAGAAAAGCTGACGC...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| 3UTR CAA 72 bp | GGAAGTGTAAGCCAAATAAACCTTTTCTTCCCCAACTaGCCTTGGGTCATGGTGTTTCATCACAGCAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSQINLFFPN*PWVMVFHHSNR Trigger: TCTATTGCTGTGATGAAACACCATGACCCAAGGCAAGTTGGGGAAGAAAAGGTTTATTTGGCTTACACTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTGGCTTCTTTCTGTCATaGCTGGAATCAAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AMPTNRKAEITEFVLSTVGFFLS*LESNFF Trigger: AAAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCC...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR GCA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCACTGTTCTTCTCTCTaGATCTTCACCAGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFALIQCPSFGDFGLMHHCSSL*IFTRAL Trigger: CAAAGCCCTGGTGAAGATGCAGAGAGAAGAACAGTG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTGGTTTACATAATAAATaGCAGATCTCGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHLGSYWYAICFQNHRDCGLHNK*QISPFF Trigger: GAAGAAAGGCGAGATCTGCCATTTATTATGTAAACC...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTGGAGGCGAGGTTTACATAATAAATaGCAGATCTCGCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RDCNKPYTKHCSVLSWRRGLHNK*QISPFF Trigger: GAAGAAAGGCGAGATCTGCCATTTATTATGTAAACC...TCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACGGCTTCTTTCTGTCATaGCTGGAATCAAACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDGFFLS*LESNFF Trigger: AAAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCC...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR TCA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGATAAATCCTCACCTTTaGAATCAAGGAGCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQINPHL*NQGAQS Trigger: AGATTGAGCTCCTTGATTTCAAAGGTGAGGATTTAT...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTGAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLSWRRAQRGGPSSLGLLRSRS*CSFAFL Trigger: GAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAG...GAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELEASPARRAEFIRTLFPLRSRS*CSFAFL Trigger: GAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAG...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEMGWTELLAWSLHTSGLLRSRS*CSFAFL Trigger: GAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAG...AAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS TCA 90 bp | GCCTTCCTCTGGCACATGGAGATCTGCAGGCGAGCGGCCCTGTTCTaGGGATTGACTGCCAACACCTTCTCGAAGTCGCCCTTGGCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFLWHMEICRRAALF*GLTANTFSKSPLAD Trigger: GTCGGCCAAGGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS TCA 90 bp | CAGCTTTGCTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCCTGCGGTCCCGCTCGTTGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLCWLPPLRPALRTS*TCWRTPCGPARCAP Trigger: AGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS GCA 90 bp | AACTTCTTGAACATGTTGGCGTACACCCTGCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGGCACATGGAGATCTGCAGGCGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NFLNMLAYTLRSRSL*SFAFLWHMEICRRA Trigger: CGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS GCA 90 bp | CTTCTTGCTCCCAGCTTTGCTGGCTTCCTCCTTTGCGTCCCGCTCTaGGAACTTCTTGAACATGTTGGCGTACACCCTGCGGTCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLAPSFAGFLLCVPL*ELLEHVGVHPAVPL Trigger: GAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTCCGTTGCTCCTTCGTTaGGGTTTGAGTATCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ELEASPARRAEFIRTLFPPLLLR*GLSIPR Trigger: GCGAGGGATACTCAAACCCAAACGAAGGAGCAACGG...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTGAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCCCTTCTACAGCCTTCTaGCTCCCAGCTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLSWRRAQRGGPSSLGLPSTAF*LPALLA Trigger: AGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGG...GAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTCAGGACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS TCA 90 bp | TCTGGCACATGGAGATCTGCAGGCGAGCGGCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGAAGTCGCCCTTGGCCGACTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGTWRSAGERPCSED*LPTPSRSRPWPTQS Trigger: ACTTTGAGTCGGCCAAGGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCATGTGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS CCA 90 bp | TGGCCAGGTTCAGGAAGGCTGCGAGGAGGAACGACTCTGAGGCTTTaGACTCCTTCTCTGACAGGCCGTATTCCATCTCCAGCCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WPGSGRLRGGTTLRL*TPSLTGRIPSPART Trigger: TGTCCTGGCTGGAGATGGAATACGGCCTGTCAGAGAAGGAGTCCAAAGCCTCAGAGTCGTTCCTCCTCGCAGCCTTCCTGAACCTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATGTCCCCCACCCCTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLFTPAAFSAVSWHVPHPYKPFS*ALSSPR Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...GGGGTGGGGGACATGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGGAGGCGAGCCCAGCGAGGAGGGCCGAGTTCATTAGGACTCTCTTCCCTAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELEASPARRAEFIRTLFPNFLNM*AYTLRS Trigger: GGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT...AGGGAAGAGAGTCCTAATGAACTCGGCCCTCCTCGCTGGGCTCGCCTCCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS GCA 90 bp | GCACATGGAGATCTGCAGGCGAGCGGCCCTGTTCTGAGGATTGACTaGCAACACCTTCTCGAAGTCGCCCTTGGCCGACTCAAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: AHGDLQASGPVLRID*QHLLEVALGRLKVI Trigger: AATGACTTTGAGTCGGCCAAGGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGCATGTCCCCCACCCCTTTGATAACCTGGCCTaGGCCAAGGCTAAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLFTPAAFSAVSWHVPHPFDNLA*AKAKGK Trigger: TTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAA...GGGGTGGGGGACATGCCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTCTCCTTCGTTTGGGTTaGAGTATCCCTCGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSLLRLG*SIPRLS Trigger: GGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAG...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGCTCCTTCGTTTGGGTTaGAGTATCCCTCGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGPSHIPDSFTTHPSCFELLRLG*SIPRLS Trigger: GGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAG...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GAGCAAGCCTTAGGTTCTGCACAGCAAGGGTGCGGGTGGGAGCATGAGGCTGAGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQALGSAQQGCGWEHEAEYKPFS*ALSSPR Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...CTCAGCCTCATGCTCCCACCCGCACCCTTGCTGTGCAGAACCTAAGGCTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSCWPGLFTPAAFSAVSWYKPFS*ALSSPR Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...CCAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGPSHIPDSFTTHPSCFENFLNM*AYTLRS Trigger: GGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TELLAWSLHTSGLLCCFLNFLNM*AYTLRS Trigger: GGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTCGCTCTGCGAACTTCTaGAACATGTTGGCGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: KWAGLSCWPGLFTPAAFSRSANF*NMLAYT Trigger: GGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCG...AGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTACCTTCTACAGCCTTCTaGCTCCCAGCTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVPSTAF*LPALLA Trigger: AGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGG...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTAGCTGGGTTCTCTCCATaGTTACTGGTGCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVAGFSP*LLVPSS Trigger: TGATGAGGGCACCAGTAACAATGGAGAGAACCCAGC...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACCGTTGCTCCTTCGTTaGGGTTTGAGTATCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSHTSLLGPQYALGRQLEPLLLR*GLSIPR Trigger: GCGAGGGATACTCAAACCCAAACGAAGGAGCAACGG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGTGTACTTGCCTCCCTaGAAGTACACAGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AWTPEARNPYSSHQNTEAVYLPP*KYTVPF Trigger: GAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACAC...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTGTGTACTTGCCTCCCTaGAAGTACACAGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEMGWTELLAWSLHTSGLVYLPP*KYTVPF Trigger: GAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACAC...AAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTCCCAGTCACATCCCAGACTCCTTCACAACCCATCCCTCCTGCTTCGAGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGPSHIPDSFTTHPSCFEYKPFS*ALSSPR Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...CTCGAAGCAGGAGGGATGGGTTGTGAAGGAGTCTGGGATGTGACTGGGACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTCTCTGCTGTTTCCTGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TELLAWSLHTSGLLCCFLYKPFS*ALSSPR Trigger: CCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTA...CAGGAAACAGCAGAGAAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS GCA 90 bp | TCCTTCTACAGCCTTCTTGCTCCCAGCTTTGCTGGCTTCCTCCTTTaGGTCCCGCTCTGCGAACTTCTTGAACATGTTGGCGTACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFYSLLAPSFAGFLL*VPLCELLEHVGVHP Trigger: AGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GCATGGACACCGGAAGCCCGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTTTTGATAACCTGGCCTaGGCCAAGGCTAAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AWTPEARNPYSSHQNTEAFDNLA*AKAKGK Trigger: TTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAA...AGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCGGGCTTCCGGTGTCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAACCGTTGCTCCTTCGTTaGGGTTTGAGTATCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPIPVSLAHNTHLGDSWKPLLLR*GLSIPR Trigger: GCGAGGGATACTCAAACCCAAACGAAGGAGCAACGG...TTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAAATGGGCTGGACTGAGCTGCTGGCCTGGTCTCTTCACACCAGCGGCCTTTGCGTCAGCTTTTCTTaGGTGTCCATCTCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TEMGWTELLAWSLHTSGLCVSFS*VSISQD Trigger: ATCTTGGGAGATGGACACCAAAGAAAAGCTGACGCA...AAGGCCGCTGGTGTGAAGAGACCAGGCCAGCAGCTCAGTCCAGCCCATTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSYWYAICFQNHRDCLRSRS*CSFAFL Trigger: GAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAG...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGACGCTCTGCGAACTTCTaGAACATGTTGGCGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGRSANF*NMLAYT Trigger: GGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCG...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAGGTGGACTTTTACCGTaGCTCCTTCGTTTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSHTSLLGPQYALGRQLEGGLLP*LLRLGL Trigger: CAAACCCAAACGAAGGAGCAACGGTAAAAGTCCACC...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS CCA 90 bp | CTCTGCATCTTCACCAGGGCTTTGTCGATCCCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACAACGAACACCACATCTCGGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LCIFTRALSIPIGMS*SSPSPTTNTTSRQS Trigger: TGATTGCCGAGATGTGGTGTTCGTTGTTGGGGAAGGAGAAGACCACGACATTCCGATTGGGATCGACAAAGCCCTGGTGAAGATGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGACTTGGAAGGCAGGTAAGGGGCCTGAGACCCAGCTGTGGACCAGGGAGCCTAGTCCCCACTCTTTaGACAATCTTTAATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLGRQVRGLRPSCGPGSLVPTL*TIFNTP Trigger: AGGAGTATTAAAGATTGTCAAAAGAGTGGGGACTAG...GCTCCCTGGTCCACAGCTGGGTCTCAGGCCCCTTACCTGCCTTCCAAGTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTGCTAAGCAAATCTCATCACCCGCCCCTGCCATGCCCACCAATAGGATTTGATAACCTGGCCTaGGCCAAGGCTAAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSVLSKSHHPPLPCPPIGFDNLA*AKAKGK Trigger: TTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAA...TCCTATTGGTGGGCATGGCAGGGGCGGGTGATGAGATTTGCTTAGCACTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTTTGAGACAGGGCCTCCCAGGTCACGGGACCAAGGGTGTGTGTCACCATGCGTCAGCTTTTCTTaGGTGTCCATCTCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCFETGPPRSRDQGCVSPCVSFS*VSISQD Trigger: ATCTTGGGAGATGGACACCAAAGAAAAGCTGACGCA...TGGTGACACACACCCTTGGTCCCGTGACCTGGGAGGCCCTGTCTCAAAACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCTAGGTTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAAAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPRFTGMLCWTLKGDKLKNFLNM*AYTLRS Trigger: GGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT...TTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAACCTAGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | ACTATGGTCCCAAAAGGACCACAGAGACACCTAGGGATCCATGGACCATGTTTGGCTGGGTTCTCTCCATaGTTACTGGTGCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TMVPKGPQRHLGIHGPCLAGFSP*LLVPSS Trigger: TGATGAGGGCACCAGTAACAATGGAGAGAACCCAGC...CAAACATGGTCCATGGATCCCTAGGTGTCTCTGTGGTCCTTTTGGGACCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | CATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAAAGAGGTGTACTTGCCTCCCTaGAAGTACACAGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTSLLGPQYALGRQLEKEVYLPP*KYTVPF Trigger: GAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACAC...CTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGACGCTCTGCGAACTTCTaGAACATGTTGGCGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGRSANF*NMLAYT Trigger: GGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCG...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CAATGGGCTCCAGAGATGACTGTCACTGATGCCCACGAGGGTCCCTGCAGTTTGCAAACCCTGAAAATATaGTCCTCTTACCTTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QWAPEMTVTDAHEGPCSLQTLKI*SSYLGQ Trigger: TTGGCCAAGGTAAGAGGACAATATTTTCAGGGTTTG...CAAACTGCAGGGACCCTCGTGGGCATCAGTGACAGTCATCTCTGGAGCCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGCTGGGTTCTCTCCATaGTTACTGGTGCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AGGHLGSYWYAICFQNHRAGFSP*LLVPSS Trigger: TGATGAGGGCACCAGTAACAATGGAGAGAACCCAGC...TCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRFALIQCPSFGDFGLMHLRSRS*CSFAFL Trigger: GAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAG...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTCCTTCTACAGCCTTCTaGCTCCCAGCTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSYWYAICFQNHRDCPSTAF*LPALLA Trigger: AGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGG...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 90 bp | GTCTTTCTTCGTAGTGATATCTTCACCCTGCTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTTACTGGTGCCCTCATCAGTAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFLRSDIFTLLSHGG*WVLSIVTGALISSH Trigger: ATGACTACTGATGAGGGCACCAGTAACAATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTGAAGATATCACTACGAAGAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAACTAGTCCCCACTCTTTaGACAATCTTTAATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSHTSLLGPQYALGRQLELVPTL*TIFNTP Trigger: AGGAGTATTAAAGATTGTCAAAAGAGTGGGGACTAG...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CAA 90 bp | CGCAACCCTTACAGCTCCCACCAGAATACAGAGGCTGCGGTGCAGGATGAGGTAAATAAATCCTCACCTTaGAAATCAAGGAGCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RNPYSSHQNTEAAVQDEVNKSSP*KSRSSI Trigger: GATTGAGCTCCTTGATTTCAAAGGTGAGGATTTATT...TACCTCATCCTGCACCGCAGCCTCTGTATTCTGGTGGGAGCTGTAAGGGTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CAA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTCTCCTTCGTTTGGGTTaGAGTATCCCTCGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSYWYAICFQNHRDCLLRLG*SIPRLS Trigger: GGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAG...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCCGTTGCTCCTTCGTTaGGGTTTGAGTATCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: AMPTNRKAEITEFVLSTVPLLLR*GLSIPR Trigger: GCGAGGGATACTCAAACCCAAACGAAGGAGCAACGG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACGGTGGACTTTTACCGTaGCTCCTTCGTTTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGHLGSYWYAICFQNHRDGGLLP*LLRLGL Trigger: CAAACCCAAACGAAGGAGCAACGGTAAAAGTCCACC...GTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGATGCGTCAGCTTTTCTTaGGTGTCCATCTCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGCVSFS*VSISQD Trigger: ATCTTGGGAGATGGACACCAAAGAAAAGCTGACGCA...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGAGACTGTAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLGSYWYAICFQNHRDCNFLNM*AYTLRS Trigger: GGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTT...ACAGTCTCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTCCTTCTACAGCCTTCTaGCTCCCAGCTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AMPTNRKAEITEFVLSTVPSTAF*LPALLA Trigger: AGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGG...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCCATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAATAAATCCTCACCTTaGAAATCAAGGAGCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PSHTSLLGPQYALGRQLENKSSP*KSRSSI Trigger: GATTGAGCTCCTTGATTTCAAAGGTGAGGATTTATT...TTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCCTTCTACAGCCTTCTaGCTCCCAGCTTTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQPSTAF*LPALLA Trigger: AGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCTGGGTTCTCTCCATaGTTACTGGTGCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PTNRKAEITEFVLSTVSAAGFSP*LLVPSS Trigger: TGATGAGGGCACCAGTAACAATGGAGAGAACCCAGC...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CATACCAGTCTCCTTGGCCCACAATACGCACTTGGGAGACAGCTGGAAAAAGAGCTAGTCCCCACTCTTTaGACAATCTTTAATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HTSLLGPQYALGRQLEKELVPTL*TIFNTP Trigger: AGGAGTATTAAAGATTGTCAAAAGAGTGGGGACTAG...CTCTTTTTCCAGCTGTCTCCCAAGTGCGTATTGTGGGCCAAGGAGACTGGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCACTCCTTCGTTTGGGTTaGAGTATCCCTCGCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTNRKAEITEFVLSTVSALLRLG*SIPRLS Trigger: GGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAG...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTGGTGGACTTTTACCGTaGCTCCTTCGTTTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AMPTNRKAEITEFVLSTVGGLLP*LLRLGL Trigger: CAAACCCAAACGAAGGAGCAACGGTAAAAGTCCACC...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTCACAGGGATGCTGTGCTGGACACTGAAAGGTGACAAACTGAAATGGGCTGGATACATAAGCTCAGCATaGGGGTCAATGCCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: FTGMLCWTLKGDKLKWAGYISSA*GSMPNL Trigger: TAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTA...TCCAGCCCATTTCAGTTTGTCACCTTTCAGTGTCCAGCACAGCATCCCTGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTGGAGGCGAGTGTACTTGCCTCCCTaGAAGTACACAGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RDCNKPYTKHCSVLSWRRVYLPP*KYTVPF Trigger: GAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACAC...TCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGCGCTCTGCGAACTTCTaGAACATGTTGGCGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: PPIGKQRSLSLFYQRFLQRSANF*NMLAYT Trigger: GGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCG...CTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS GCA 90 bp | ATCTTTAATACTCCTCTGTCTTTCTTCGTAGTGATATCTTCACCCTaGTCAGTCATGGTGGCTGCTGGGTTCTCTCCATTGTTACTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IFNTPLSFFVVISSP*SVMVAAGFSPLLLV Trigger: CACCAGTAACAATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTGAAGATATCACTACGAAGAAAGACAGAGGAGTATTAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCAGTGTGACGCTGGGTTCTCTCCATaGTTACTGGTGCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: IGKQRSLSLFYQRFLQCDAGFSP*LLVPSS Trigger: TGATGAGGGCACCAGTAACAATGGAGAGAACCCAGC...GTCACACTGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTAATTGGGGAGAATCATTGTGGATGCTGCCATCCCTGGGCTAGTGATCCTCTAGTCCCCACTCTTTaGACAATCTTTAATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WLIGENHCGCCHPWASDPLVPTL*TIFNTP Trigger: AGGAGTATTAAAGATTGTCAAAAGAGTGGGGACTAG...AGGATCACTAGCCCAGGGATGGCAGCATCCACAATGATTCTCCCCAATTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGATACATAAGCTCAGCATaGGGGTCAATGCCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: AGGHLGSYWYAICFQNHRYISSA*GSMPNL Trigger: TAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTA...TCTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGGTGGTCATTTGGGAAGCTACTGGTATGCCATTTGCTTCCAGAATCACAGTACATAAGCTCAGCATaGGGGTCAATGCCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRWSFGKLLVCHLLPESQYISSA*GSMPNL Trigger: TAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTA...CTGTGATTCTGGAAGCAAATGGCATACCAGTAGCTTCCCAAATGACCACCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
||
| CDS-3UTR CAA 90 bp | CCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTCTGCATGCGTCAGCTTTTCTTaGGTGTCCATCTCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTNRKAEITEFVLSTVSACVSFS*VSISQD Trigger: ATCTTGGGAGATGGACACCAAAGAAAAGCTGACGCA...TGCAGAAACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR CAA 90 bp | ACTATCAAAAGAGGTTCAGCAGGTCATCTGCATCAAAGGGCTTCTCACACTACATATTGTCCTCTTACCTaGGCCAAGGCTAAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TIKRGSAGHLHQRASHTTYCPLT*AKAKGK Trigger: TTTGCCTTTAGCCTTGGCCAAGGTAAGAGGACAATA...TGTAGTGTGAGAAGCCCTTTGATGCAGATGACCTGCTGAACCTCTTTTGATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233291.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGCCCACCAATAGGAAAGCAGAGATCACTGAGTTTGTTTTATCAACGGTTTACATAAGCTCAGCATaGGGGTCAATGCCAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: AMPTNRKAEITEFVLSTVYISSA*GSMPNL Trigger: TAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTA...AACCGTTGATAAAACAAACTCAGTGATCTCTGCTTTCCTATTGGTGGGCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS-3UTR CAA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATGTGTACTTGCCTCCCTaGAAGTACACAGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRFALIQCPSFGDFGLMHVYLPP*KYTVPF Trigger: GAAGGGAACTGTGTACTTCAAGGGAGGCAAGTACAC...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATTTTGATAACCTGGCCTaGGCCAAGGCTAAAGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRFALIQCPSFGDFGLMHFDNLA*AKAKGK Trigger: TTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAA...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CAA 90 bp | TTAAGATTTGCCCTAATTCAATGCCCAAGTTTTGGAGACTTTGGCTTGATGCATTGCGTCAGCTTTTCTTaGGTGTCCATCTCCCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LRFALIQCPSFGDFGLMHCVSFS*VSISQD Trigger: ATCTTGGGAGATGGACACCAAAGAAAAGCTGACGCA...ATGCATCAAGCCAAAGTCTCCAAAACTTGGGCATTGAATTAGGGCAAATCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS-3UTR CAA 90 bp | AGAGACTGTAACAAACCTTACACTAAACACTGTTCAGTCCTGAGTTGGAGGCGAAATAAATCCTCACCTTaGAAATCAAGGAGCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RDCNKPYTKHCSVLSWRRNKSSP*KSRSSI Trigger: GATTGAGCTCCTTGATTTCAAAGGTGAGGATTTATT...TCGCCTCCAACTCAGGACTGAACAGTGTTTAGTGTAAGGTTTGTTACAGTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CCA 72 bp | CCCGCTCGTTGTGCTCCTTCGCCTTCCTCTGGCACATaGAGATCTGCAGGCGAGCGGCCCTGTTCTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PARCAPSPSSGT*RSAGERPCSED Trigger: ATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCATGTGCCAGAGGAAGGCGAAGGAGCACAACGAGCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS TCA 72 bp | TGGAGATCTGCAGGCGAGCGGCCCTGTTCTGAGGATTaGCTGCCAACACCTTCTCGAAGTCGCCCTTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: WRSAGERPCSED*LPTPSRSRPWP Trigger: CGGCCAAGGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 72 bp | GATCTGCAGGCGAGCGGCCCTGTTCTGAGGATTGACTaGCAACACCTTCTCGAAGTCGCCCTTGGCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: DLQASGPVLRID*QHLLEVALGRL Trigger: GAGTCGGCCAAGGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 72 bp | CTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTaGAACATGTTGGCGTACACCCTGCGGTCCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LASSFASRSANF*NMLAYTLRSRS Trigger: CGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 72 bp | CCAGCGGCTCCTTCTACAGCCTTCTTGCTCCCAGCTTaGCTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PAAPSTAFLLPA*LASSFASRSAN Trigger: GTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGGAGCCGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | CTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCCCGCTCGTTGTGCTCCTTCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LASSFASRSANFLNM*AYTLRSRSLCSFAF Trigger: GAAGGCGAAGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | CCAGCTTTGCTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTaGAACATGTTGGCGTACACCCTGCGGTCCCGCTCGTTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PALLASSFASRSANF*NMLAYTLRSRSLCS Trigger: GGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS TCA 72 bp | TGGCACATGGAGATCTGCAGGCGAGCGGCCCTGTTCTaGGGATTGACTGCCAACACCTTCTCGAAGTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WHMEICRRAALF*GLTANTFSKSP Trigger: GGGCGACTTCGAGAAGGTGTTGGCAGTCAATCCTCAGAACAGGGCCGCTCGCCTGCAGATCTCCATGTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS TCA 72 bp | TGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTTaGACATGTTGGCGTACACCCTGCGGTCCCGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: WLPPLRPALRTS*TCWRTPCGPAR Trigger: ACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 72 bp | AACATGTTGGCGTACACCCTGCGGTCCCGCTCGTTGTaGTCCTTCGCCTTCCTCTGGCACATGGAGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NMLAYTLRSRSL*SFAFLWHMEIC Trigger: GCAGATCTCCATGTGCCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 72 bp | AGCTGGGCCTCGCCCCTTCTGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGGGCCTTGTCGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SWASPLLYKPFS*ALSSPRALSQH Trigger: GTGCTGCGACAAGGCCCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTACAGAAGGGGCGAGGCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 72 bp | TCCTTTGCGTCCCGCTCTGCGAACTTCTTGAACATGTaGGCGTACACCCTGCGGTCCCGCTCGTTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFASRSANFLNM*AYTLRSRSLCS Trigger: GGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | TTCATGAGCAGCTGGGCCTCGCCCCTTCTGTACAAGCCTTTCTCATaGGCACTGTCCAGTCCAAGGGCCTTGTCGCAGCACTCCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FMSSWASPLLYKPFS*ALSSPRALSQHSTA Trigger: AGCCGTGGAGTGCTGCGACAAGGCCCTTGGACTGGACAGTGCCAATGAGAAAGGCTTGTACAGAAGGGGCGAGGCCCAGCTGCTCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | GCGAACTTCTTGAACATGTTGGCGTACACCCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTCTGGCACATGGAGATCTGCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ANFLNMLAYTLRSRS*CSFAFLWHMEICRR Trigger: TCGCCTGCAGATCTCCATGTGCCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 72 bp | CCCAGCTTTGCTGGCTTCCTCCTTTGCGTCCCGCTCTaGGAACTTCTTGAACATGTTGGCGTACACCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSFAGFLLCVPL*ELLEHVGVHPA Trigger: CGCAGGGTGTACGCCAACATGTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 72 bp | CGTGTTGTTTGCCAGCGGCTCCTTCTACAGCCTTCTTaGTCCCAGCTTTGCTGGCTTCCTCCTTTGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVVCQRLLLQPS*SQLCWLPPLRP Trigger: GGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGGAGCCGCTGGCAAACAACACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CCA 72 bp | CGGCTCCTTCTACAGCCTTCTTGCTCCCAGCTTTGCTaGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLLLQPSCSQLC*LPPLRPALRTS Trigger: AGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGGAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 72 bp | TTGAACATGTTGGCGTACACCCTGCGGTCCCGCTCGTaGTGCTCCTTCGCCTTCCTCTGGCACATGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LNMLAYTLRSRS*CSFAFLWHMEI Trigger: GATCTCCATGTGCCAGAGGAAGGCGAAGGAGCACAACGAGCGGGACCGCAGGGTGTACGCCAACATGTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | TGTTGTTTGCCAGCGGCTCCTTCTACAGCCTTCTTGCTCCCAGCTTaGCTGGCTTCCTCCTTTGCGTCCCGCTCTGCGAACTTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CCLPAAPSTAFLLPA*LASSFASRSANFLN Trigger: GTTCAAGAAGTTCGCAGAGCGGGACGCAAAGGAGGAAGCCAGCAAAGCTGGGAGCAAGAAGGCTGTAGAAGGAGCCGCTGGCAAACAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | TACATGGCCTTTGGCCTTTCCTTCTTCCATGGCCTGACTCTCGTGTaGTTTGCCAGCGGCTCCTTCTACAGCCTTCTTGCTCCCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YMAFGLSFFHGLTLV*FASGSFYSLLAPSF Trigger: AAAGCTGGGAGCAAGAAGGCTGTAGAAGGAGCCGCTGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGGAAAGGCCAAAGGCCATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS TCA 72 bp | CATACATGGCCTTTGGCCTTTCCTTCTTCCATGGCCTaGCTCTCGTGTTGTTTGCCAGCGGCTCCTTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: HTWPLAFPSSMA*LSCCLPAAPST Trigger: TGTAGAAGGAGCCGCTGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGGAAAGGCCAAAGGCCATGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS GCA 72 bp | CGTAGTGATATCTTCACCCTGCTCAGTCATGGTGGCTaGTGGGTTCTCTCCATTGTTACTGGTGCCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RSDIFTLLSHGG*WVLSIVTGALI Trigger: GATGAGGGCACCAGTAACAATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTGAAGATATCACTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
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| CDS CAA 72 bp | TTTGGCCTTTCCTTCTTCCATGGCCTGACTCTCGTGTaGTTTGCCAGCGGCTCCTTCTACAGCCTTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGLSFFHGLTLV*FASGSFYSLLA Trigger: AGCAAGAAGGCTGTAGAAGGAGCCGCTGGCAAACAACACGAGAGTCAGGCCATGGAAGAAGGAAAGGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | GCCTTCTCGAAGCTCTTAAGGGTGACCTCGTACATAAGCTCAGCATaGGGGTCAATGCCAAACTTAGGCTTCCCGGCTTCTCCAAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: AFSKLLRVTSYISSA*GSMPNLGFPASPKP Trigger: TGGTTTTGGAGAAGCCGGGAAGCCTAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTACGAGGTCACCCTTAAGAGCTTCGAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CCA 72 bp | AGTGATATCTTCACCCTGCTCAGTCATGGTGGCTGCTaGGTTCTCTCCATTGTTACTGGTGCCCTCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDIFTLLSHGGC*VLSIVTGALIS Trigger: ACTGATGAGGGCACCAGTAACAATGGAGAGAACCCAGCAGCCACCATGACTGAGCAGGGTGAAGATATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
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| CDS CCA 72 bp | TTCACCAGGGCTTTGTCGATCCCAATCGGAATGTCGTaGTCTTCTCCTTCCCCAACAACGAACACCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: FTRALSIPIGMS*SSPSPTTNTTS Trigger: AGATGTGGTGTTCGTTGTTGGGGAAGGAGAAGACCACGACATTCCGATTGGGATCGACAAAGCCCTGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CAA 72 bp | AAGCTCTTAAGGGTGACCTCGTACATAAGCTCAGCATaGGGGTCAATGCCAAACTTAGGCTTCCCGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KLLRVTSYISSA*GSMPNLGFPAS Trigger: AGAAGCCGGGAAGCCTAAGTTTGGCATTGACCCCAATGCTGAGCTTATGTACGAGGTCACCCTTAAGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233870.2 |
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| CDS CAA 90 bp | CAGATCTCGCCTTTCTTCATAGTAGACACCCCAATGTCCCAGGCTTaGATAACCTGGCCTTGGCCAAGGCTAAAGGCAAATGGCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QISPFFIVDTPMSQA*ITWPWPRLKANGFF Trigger: AAAGAAGCCATTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAAGCCTGGGACATTGGGGTGTCTACTATGAAGAAAGGCGAGATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
||
| CDS TCA 72 bp | CAGGTGGACTTTTACCGTTGCTCCTTCGTTTGGGTTTaGGTATCCCTCGCCTTTCCGTTTGATTCTACGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QVDFYRCSFVWV*VSLAFPFDSTD Trigger: ATCCGTAGAATCAAACGGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAGCAACGGTAAAAGTCCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CAA 72 bp | CCTTTCTTCATAGTAGACACCCCAATGTCCCAGGCTTaGATAACCTGGCCTTGGCCAAGGCTAAAGGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PFFIVDTPMSQA*ITWPWPRLKAN Trigger: ATTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAAGCCTGGGACATTGGGGTGTCTACTATGAAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CAA 72 bp | ATACACTGTTCTTCTCTCTGCATCTTCACCAGGGCTTaGTCGATCCCAATCGGAATGTCGTGGTCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IHCSSLCIFTRA*SIPIGMSWSSP Trigger: AGGAGAAGACCACGACATTCCGATTGGGATCGACAAAGCCCTGGTGAAGATGCAGAGAGAAGAACAGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CAA 90 bp | ACCGTTGCTCCTTCGTTTGGGTTTGAGTATCCCTCGCCTTTCCGTTaGATTCTACGGATAACGCCTGAATCTTCAAATAAATCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: TVAPSFGFEYPSPFR*ILRITPESSNKSSP Trigger: AGGTGAGGATTTATTTGAAGATTCAGGCGTTATCCGTAGAATCAAACGGAAAGGCGAGGGATACTCAAACCCAAACGAAGGAGCAACGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CCA 72 bp | CCCTTTGTAGTGGACATAAACTTTGTCACCAAACATTaGGGCCTCGTCACTAGTCCCCACTCTTTTGACAAT | + |
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Preference number: 6 (lower is better) Translates to: PFVVDINFVTKH*GLVTSPHSFDN Trigger: ATTGTCAAAAGAGTGGGGACTAGTGACGAGGCCCCAATGTTTGGTGACAAAGTTTATGTCCACTACAAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
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| CDS CAA 72 bp | CCAAACATTGGGGCCTCGTCACTAGTCCCCACTCTTTaGACAATCTTTAATACTCCTCTGTCTTTCTTCGTA | + |
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Preference number: 6 (lower is better) Translates to: PNIGASSLVPTL*TIFNTPLSFFV Trigger: TACGAAGAAAGACAGAGGAGTATTAAAGATTGTCAAAAGAGTGGGGACTAGTGACGAGGCCCCAATGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 ENSMUST00000233291.2 |
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| CDS CCA 72 bp | TTTGATAACCTGGCCTTGGCCAAGGCTAAAGGCAAATaGCTTCTTTCTGTCATGACTGGAATCAAACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FDNLALAKAKGK*LLSVMTGIKLL Trigger: AAGAAGTTTGATTCCAGTCATGACAGAAAGAAGCCATTTGCCTTTAGCCTTGGCCAAGGCCAGGTTATCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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| CDS CAA 72 bp | CCTTCGTTTGGGTTTGAGTATCCCTCGCCTTTCCGTTaGATTCTACGGATAACGCCTGAATCTTCAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: PSFGFEYPSPFR*ILRITPESSNK Trigger: TTTATTTGAAGATTCAGGCGTTATCCGTAGAATCAAACGGAAAGGCGAGGGATACTCAAACCCAAACGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079413.11 ENSMUST00000114792.8 ENSMUST00000153744.2 ENSMUST00000177939.8 ENSMUST00000233102.2 |
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