RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FKBP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030357

Ensembl transcript IDs: ENSMUST00000032508.11, ENSMUST00000150387.8

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGAGGCAATGGATGCAACAGCGGTGTACCCATGCCCCTAGCACCTaGACGGAGACACAGGCTTGGAAAACCACAGAGGGAAGAGATGGG +
Preference number: 1 (lower is better)
Translates to: ERQWMQQRCTHAPST*TETQAWKTTEGRDG
Trigger: CCCATCTCTTCCCTCTGTGGTTTTCCAAGCCTGTGTCTCCGTGCAGGTGCTAGGGGCATGGGTACACCGCTGTTGCATCCATTGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
3UTR-3UTR CCA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACCACAGAGGGAAGAGATaGGAAAATGGCTGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNHRGKR*ENGCPG
Trigger: TCCTGGACAGCCATTTTCCCATCTCTTCCCTCTGTG...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
3UTR-3UTR CCA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACACAAAACTAACAGGGTaGAGTAAGAAGGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNTKLTG*SKKGAG
Trigger: CCCTGCTCCCTTCTTACTCCACCCTGTTAGTTTTGT...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
3UTR-3UTR TCA 90 bp GGAGGTACTGGTAGGGGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATTCTGATGTACGTGTaGAAGGATATACACTTGTGT +
Preference number: 2 (lower is better)
Translates to: GGTGRGCLEVITVIPEGVILMYV*KDIHLC
Trigger: ACACAAGTGTATATCCTTTCACACGTACATCAGAAT...AACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCCCCTACCAGTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
3UTR-3UTR CAA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACCACGGAGACACAGGCTaGGAAAACCACAGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNHGDTG*ENHRGK
Trigger: CTTCCCTCTGTGGTTTTCCAAGCCTGTGTCTCCGTG...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
3UTR-3UTR CAA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGGGAAGAAAAGTAGGGTaGACACCATCTAAAACTACC +
Preference number: 3 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRGRKVG*TPSKTT
Trigger: GGTAGTTTTAGATGGTGTCAACCCTACTTTTCTTCC...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR TCA 90 bp GGAGGTACTGGTAGGGGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTCCTTTCTCCATGCGCTaGATGGCCTCCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGTGRGCLEVITVIPEGVPFSMR*MASSSP
Trigger: TGGGCTGGAGGAGGCCATTCAGCGCATGGAGAAAGG...AACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCCCCTACCAGTACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGTTTTCCCGGGCGAGCTaGCTACGGGTCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRFSRAS*LRVRCW
Trigger: CCAGCAGCGGACCCGTAGGCAGCTCGCCCGGGAAAA...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CCA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACGCGTGCGGTGGGATCTaGAACCTCTCCTTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNACGGI*NLSFPT
Trigger: TGTGGGGAAGGAGAGGTTCCAGATCCCACCGCACGC...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGGGATCTTCGGAGGGCTaGCTGCTGCGCCATAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRGSSEG*LLRHRH
Trigger: ATGCCTATGGCGCAGCAGGCAGCCCTCCGAAGATCC...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CCA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACAAGCAGAGCTCCCGCTaGTCAAAGAGGCGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNKQSSR*SKRRSL
Trigger: CAAGGACCGCCTCTTTGACCAGCGGGAGCTCTGCTT...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR TCA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGCGTCCTGTTTGGGGCTaGTGTCCACTCCTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRRPVWG*CPLLRE
Trigger: CTCTCGAAGGAGTGGACATCAGCCCCAAACAGGACG...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp CCAACTCAGGAGAGCAAGGTAAGAGAGGCAATGGATGCAACAGCGGTGTACCCACCCCACTTTCATGGTTaGCACAGCAATATCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTQESKVREAMDATAVYPPHFHG*HSNIPS
Trigger: GCTTGGGATATTGCTGTGGCAACCATGAAAGTGGGG...TGGGTACACCGCTGTTGCATCCATTGCCTCTCTTACCTTGCTCTCCTGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp GGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACGGGATGGTCTCCTGCTaGCACTTCTGCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: GCLEVITVIPEGVIRNTNGMVSC*HFCLHL
Trigger: AAGGTGAAGGCAGAAGTGGCAGCAGGAGACCATCCC...GTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR TCA 90 bp CTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCATTCTGGCTTGCAGGTaGTGTGGCACACTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LSRGDHCDTRGRYQEYQLILACR*CGTLPP
Trigger: TGGGGGAAGTGTGCCACATCACCTGCAAGCCAGAAT...GAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR TCA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGGCTTTCGATGGCAGCTaGGAAGGCCTGCAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRAFDGS*EGLQFQ
Trigger: CTGAAACTGCAGGCCTTCTCAGCTGCCATCGAAAGC...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp CTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGTGGGATGGTCTCCTaGTGCCACTTCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSRGDHCDTRGRYQEYQLSGMVS*CHFCLH
Trigger: GTGAAGGCAGAAGTGGCAGCAGGAGACCATCCCACT...GAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR GCA 90 bp CTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCACGATCTTCTTGTACTaGAGTAACGCCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LSRGDHCDTRGRYQEYQLTIFLY*SNACLY
Trigger: GTACAAGCAGGCGTTACTGCAGTACAAGAAGATCGT...GAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CCA 90 bp GTACGTGTGAAAGGATATACACTTGTGTGTAACGGGGGAAGAAAAGTAGGGTTGTCTCCCAAGACTCCTTaGCCTTCTCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VRVKGYTLVCNGGRKVGLSPKTP*PSQSSS
Trigger: TGAAGAGCTTTGAGAAGGCCAAGGAGTCTTGGGAGA...CAACCCTACTTTTCTTCCCCCGTTACACACAAGTGTATATCCTTTCACACGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CAA 90 bp GGAGGTACTGGTAGGGGCTGTCTAGAGGTGATCACTGTGATACCAGAGGGCGTTCCCCCACTTTCATGGTaGCCACAGCAATATCCCAAG +
Preference number: 5 (lower is better)
Translates to: GGTGRGCLEVITVIPEGVPPLSW*PQQYPK
Trigger: CTTGGGATATTGCTGTGGCAACCATGAAAGTGGGGG...AACGCCCTCTGGTATCACAGTGATCACCTCTAGACAGCCCCTACCAGTACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CAA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGACGCCCTCGTCCTGTTaGGGGCTGATGTCCACTCCT +
Preference number: 5 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRTPSSC*GLMSTP
Trigger: AGGAGTGGACATCAGCCCCAAACAGGACGAGGGCGT...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CAA 90 bp CCAACTCAGGAGAGCAAGGTAAGAGAGGCAATGGATGCAACAGCGGTGTACCCACAAGACACGATCTTCTaGTACTGCAGTAACGCCTGC +
Preference number: 5 (lower is better)
Translates to: PTQESKVREAMDATAVYPQDTIF*YCSNAC
Trigger: GCAGGCGTTACTGCAGTACAAGAAGATCGTGTCTTG...TGGGTACACCGCTGTTGCATCCATTGCCTCTCTTACCTTGCTCTCCTGAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS-3UTR CAA 90 bp TCTAGAGGTGATCACTGTGATACCAGAGGGCGTTATCAGGAATACCAACTCAGGTCCAGCTCCAAGGCCTaGTTGCAGCTTTCGATGGCA +
Preference number: 5 (lower is better)
Translates to: SRGDHCDTRGRYQEYQLRSSSKA*LQLSMA
Trigger: TGCCATCGAAAGCTGCAACAAGGCCTTGGAGCTGGA...CCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAGTGATCACCTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS CCA 72 bp TTGTTCCGCTCACCCTTCATCTCAGCATCAGTGGGATaGTCTCCTGCTGCCACTTCTGCCTTCACCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LFRSPFISASVG*SPAATSAFTLC
Trigger: GCACAAGGTGAAGGCAGAAGTGGCAGCAGGAGACCATCCCACTGATGCTGAGATGAAGGGTGAGCGGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032508.11
CDS CAA 72 bp AAGCTAGACTCGTATTCTAGCCAAGACACGATCTTCTaGTACTGCAGTAACGCCTGCTTGTACTTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KLDSYSSQDTIF*YCSNACLYLPS
Trigger: GGAAGGCAAGTACAAGCAGGCGTTACTGCAGTACAAGAAGATCGTGTCTTGGCTAGAATACGAGTCTAGCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032508.11
ENSMUST00000150387.8