Pregenerated sensors for FKBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056629Ensembl transcript IDs: ENSMUST00000070878.9, ENSMUST00000177752.9, ENSMUST00000237119.2, ENSMUST00000238181.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTCCAATCTGCAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTGCTaGCAGGGCACTCAGGCAAATGGACAGTATTGTCAGGATCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSNLQLPFAFGPRGC*QGTQANGQYCQDPA Trigger: AGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR CCA 90 bp | GTTTGCCTTCGGCCCCCGTGGCTGCTGCCAGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCCAGCTCAGCCTCATGTCTCTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: VCLRPPWLLPGHSGK*TVLSGSSSASCLCR Trigger: CCTACAGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 90 bp | CTTCACTCCAATCTGCAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCAAATGGACAGTATTGTCAGGATCCA | + |
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Preference number: 1 (lower is better) Translates to: LHSNLQLPFAFGPRG*CQGTQANGQYCQDP Trigger: TGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 90 bp | CTAGACTTGATAGGACAGTGGTCCACACGTTTCTTCACTCCAATCTaGAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTGCTGCCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LDLIGQWSTRFFTPI*SFRLPSAPVAAARA Trigger: TGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTGTCCTATCAAGTCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 90 bp | GGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTaGTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGTAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: GQCQGRKQRAGSVVG*CQTPSHLLAFPCSA Trigger: TGCACTACACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| 3UTR CAA 90 bp | CGGCCCCCGTGGCTGCTGCCAGGGCACTCAGGCAAATGGACAGTATaGTCAGGATCCAGCTCAGCCTCATGTCTCTGTAGGCAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RPPWLLPGHSGKWTV*SGSSSASCLCRQRP Trigger: TGGCCTTTGCCTACAGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR CAA 90 bp | GGACAGTGGTCCACACGTTTCTTCACTCCAATCTGCAGCTTCCGTTaGCCTTCGGCCCCCGTGGCTGCTGCCAGGGCACTCAGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: GQWSTRFFTPICSFR*PSAPVAAARALRQM Trigger: CATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PLITWPVPREKTKGWFCGFGPRG*CQGTQA Trigger: TGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAA...ACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGTCTGCAGCTTCCGTTTaGCTTCGGCCCCCGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LVPALDNLASAKGENKGLSAASV*LRPPWL Trigger: CAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGA...CAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCTGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTGGCCACAGCAGCCAGTaGCCCCTCCCTTTGCTCACT | + |
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Preference number: 2 (lower is better) Translates to: KGWFCGRLLSNSVPSSSFGHSSQ*PLPLLT Trigger: AGTGAGCAAAGGGAGGGGGCACTGGCTGCTGTGGCC...AAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGCAGCCCTTGATAACCTaGCCAGTGCCAAGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LVPALDNLASAKGENKGLQPLIT*PVPREK Trigger: TTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTG...CAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: PLITWPVPREKTKGWFCGGHSGK*TVLSGS Trigger: GGATCCTGACAATACTGTCCATTTGCCTGAGTGCCC...ACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGTATTGTCAGGATCCAGCTCAGCCTCATGTCTCTGTAGGCAAAGGCCAGAGAAAACAAAGGGCTaGTTCTGTGGTAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WTVLSGSSSASCLCRQRPEKTKG*FCGRLL Trigger: CAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTC...TGGCCTTTGCCTACAGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 72 bp | CTGCAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTGCTaGCAGGGCACTCAGGCAAATGGACAGTATTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LQLPFAFGPRGC*QGTQANGQYCQ Trigger: CTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGCCCTGGTCCCAGCCCTaGATAACCTGGCCAGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: AGSVVGCCQTPSHLLAFPPWSQP*ITWPVP Trigger: TGGCACTGGCCAGGTTATCAAGGGCTGGGACCAGGG...CGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| 3UTR GCA 72 bp | AATCTGCAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCAAATGGACAGTATTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLQLPFAFGPRG*CQGTQANGQYC Trigger: ACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 72 bp | ATAGGACAGTGGTCCACACGTTTCTTCACTCCAATCTaGAGCTTCCGTTTGCCTTCGGCCCCCGTGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: IGQWSTRFFTPI*SFRLPSAPVAA Trigger: AGCAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTGTCCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR TCA 72 bp | CTGCAGCCTGCTACAGTTCTGAGCGTCTCTCAATCTTaGGCAGCTCCACCTCAAACACCAGGGTTGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LQPATVLSVSQS*AAPPQTPGLLH Trigger: GTGGAGCAACCCTGGTGTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCTCAGAACTGTAGCAGGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| 3UTR GCA 72 bp | CAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTaGTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: QGRKQRAGSVVG*CQTPSHLLAFP Trigger: CGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLVPDGGLLALCSLLQFWFGPRG*CQGTQA Trigger: TGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAA...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR GCA 90 bp | CTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCCCTCCGCCCCCTGACCTaGAGCTCCACCCTCCGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LVPDGGLLALCSLLQFWSLRPLT*SSTLRN Trigger: ATTGCGGAGGGTGGAGCTGCAGGTCAGGGGGCGGAG...GGACCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | AACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLVPDGGLLALCSLLQFFGPRG*CQGTQA Trigger: TGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAA...GAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR GCA 90 bp | CTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGCCCAGTCCGGCCCCGTaGCTCCTCCACCAGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LVPALDNLASAKGENKGLPSPAP*LLHQGH Trigger: GTGCCCCTGGTGGAGGAGGCACGGGGCCGGACTGGG...CAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCCCCGCCACACCCAGCTaGCCCCTGTCCAGCACACCC | + |
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Preference number: 4 (lower is better) Translates to: PWSQPLITWPVPREKTKGPATPS*PLSSTP Trigger: GGGTGTGCTGGACAGGGGGCAGCTGGGTGTGGCGGG...GCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCTGCAGCTTCCGTTTaGCTTCGGCCCCCGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLVPDGGLLALCSLLQFWSAASV*LRPPWL Trigger: CAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGA...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | TTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTGCCTTCGGCCCCCGTaGCTGCTGCCAGGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LNSLVPDGGLLALCSLLQCLRPP*LLPGHS Trigger: TGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCA...CTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | CTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCCCTCCTACTCCAGCTATaGGCCACTGGGTTCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVPDGGLLALCSLLQFWSLLLQL*ATGFRP Trigger: AGGGCGGAACCCAGTGGCCCATAGCTGGAGTAGGAG...GGACCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | CCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTCCCAGTCCGGCCCCGTaGCTCCTCCACCAGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PLITWPVPREKTKGWFCGPSPAP*LLHQGH Trigger: GTGCCCCTGGTGGAGGAGGCACGGGGCCGGACTGGG...ACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGCCCGCCACACCCAGCTaGCCCCTGTCCAGCACACCC | + |
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Preference number: 4 (lower is better) Translates to: WFCGRLLSNSVPSSSFPVPATPS*PLSSTP Trigger: GGGTGTGCTGGACAGGGGGCAGCTGGGTGTGGCGGG...CACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGTGCCTTCGGCCCCCGTaGCTGCTGCCAGGGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LFLNSLVPDGGLLALCSLCLRPP*LLPGHS Trigger: TGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCA...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR TCA 90 bp | GTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGTAGTGCAGCACCTCCCCAACTCTaGGCTCTTGGGGGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: VVGCCQTPSHLLAFPCSAAPPQL*ALGGLR Trigger: CCGGAGGCCCCCAAGAGCTCAGAGTTGGGGAGGTGC...TGCACTACACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR TCA 90 bp | CCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCAAACGCACCTCCCCAACTCTaGGCTCTTGGGGGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PVPREKTKGWFCGRLLSNAPPQL*ALGGLR Trigger: CCGGAGGCCCCCAAGAGCTCAGAGTTGGGGAGGTGC...GTTTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCAAAGTGAGAAGGGGGCTTaGCCGAGGACCCCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GQCQGRKQRAGSVVGCCQSEKGA*PRTPAA Trigger: CGCTGCTGGGGTCCTCGGTCAAGCCCCCTTCTCACT...TTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGTTCGGCCCCCGTGGCTaGTGCCAGGGCACTCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: WFCGRLLSNSVPSSSFPVFGPRG*CQGTQA Trigger: TGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAA...CACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR GCA 90 bp | CTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCCCTCAAACACCAGGGTTaGTCCACCTGGGATCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LVPDGGLLALCSLLQFWSLKHQG*STWDLW Trigger: CCAAAGATCCCAGGTGGAGCAACCCTGGTGTTTGAG...GGACCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | CCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCCAACTCTGAGCTCTTaGGGGCCTCCGGGGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: PGQCQGRKQRAGSVVGCCPTLSS*GPPGNP Trigger: TGGGTTCCCCGGAGGCCCCCAAGAGCTCAGAGTTGG...ACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGTCTGCAGCTTCCGTTTaGCTTCGGCCCCCGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LFLNSLVPDGGLLALCSLSAASV*LRPPWL Trigger: CAGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGA...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR GCA 90 bp | TGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCAGGCCACAGCAGCCAGTaGCCCCTCCCTTTGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: WPVPREKTKGWFCGRLLSGHSSQ*PLPLLT Trigger: AGTGAGCAAAGGGAGGGGGCACTGGCTGCTGTGGCC...TGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGCAGCCCTTGATAACCTaGCCAGTGCCAAGGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SLVPDGGLLALCSLLQFWQPLIT*PVPREK Trigger: TTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTG...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR TCA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGAGCGTCTCTCAATCTTaGGCAGCTCCACCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SLVPDGGLLALCSLLQFWSVSQS*AAPPQT Trigger: TGTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCT...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR TCA 90 bp | CTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGCATGTCTCAGTCCAGTaGGAAGGGGGCTTGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: LVPALDNLASAKGENKGLHVSVQ*EGGLTE Trigger: CTCGGTCAAGCCCCCTTCTCACTGGACTGAGACATG...CAGCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SLVPDGGLLALCSLLQFWGHSGK*TVLSGS Trigger: GGATCCTGACAATACTGTCCATTTGCCTGAGTGCCC...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | GACAGTGGTCCACACGTTTCTTCACTCCAATCTGCAGCTTCCGTTTGCCTTCGGCCAACTCTGAGCTCTTaGGGGCCTCCGGGGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: DSGPHVSSLQSAASVCLRPTLSS*GPPGNP Trigger: TGGGTTCCCCGGAGGCCCCCAAGAGCTCAGAGTTGG...CCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR TCA 90 bp | GACAGTGGTCCACACGTTTCTTCACTCCAATCTGCAGCTTCCGTTTGCCTTCGGGGCCACGCCACTCACTaGCTGAAGTCCCACCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: DSGPHVSSLQSAASVCLRGHATH*LKSHLQ Trigger: TTGGAGGTGGGACTTCAGTCAGTGAGTGGCGTGGCC...CCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | TTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGGCTCCACTTTCCACCTaGTCCAGCTCCTCCTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: LNSLVPDGGLLALCSLLQAPLST*SSSSSK Trigger: TTTAGAGGAGGAGCTGGAGCAGGTGGAAAGTGGAGC...CTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR CCA 90 bp | AACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NSLVPDGGLLALCSLLQFGHSGK*TVLSGS Trigger: GGATCCTGACAATACTGTCCATTTGCCTGAGTGCCC...GAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | AACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCGAGAAAACAAAGGGCTaGTTCTGTGGTAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLVPDGGLLALCSLLQFEKTKG*FCGRLL Trigger: CAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTC...GAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR TCA 90 bp | TTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGAGCGTCTCTCAATCTTaGGCAGCTCCACCTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LNSLVPDGGLLALCSLLQSVSQS*AAPPQT Trigger: TGTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCT...CTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR GCA 90 bp | CAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCAAACTGCACACCCACACATCTaGGGCTGCTGCAGGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QCQGRKQRAGSVVGCCQTAHPHI*GCCRCS Trigger: CGAACACCTGCAGCAGCCGCAGATGTGTGGGTGTGC...AGTTTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| 3UTR CAA 72 bp | TGGCTGCTGCCAGGGCACTCAGGCAAATGGACAGTATaGTCAGGATCCAGCTCAGCCTCATGTCTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLPGHSGKWTV*SGSSSASCLCR Trigger: CCTACAGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR GCA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTCAAACACCAGGGTTaGTCCACCTGGGATCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLNSLVPDGGLLALCSLLKHQG*STWDLW Trigger: CCAAAGATCCCAGGTGGAGCAACCCTGGTGTTTGAG...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCAGCCCTTGATAACCTaGCCAGTGCCAAGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLNSLVPDGGLLALCSLQPLIT*PVPREK Trigger: TTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTG...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| 3UTR CAA 72 bp | TCTGCAGCCTGCTACAGTTCTGAGCGTCTCTCAATCTaGAGCAGCTCCACCTCAAACACCAGGGTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAACYSSERLSI*SSSTSNTRVAP Trigger: TGGAGCAACCCTGGTGTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCTCAGAACTGTAGCAGGCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR TCA 90 bp | CAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCAAACTCCTTTGCTCACTACCTaGCCTTCTCTCCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCQGRKQRAGSVVGCCQTPLLTT*PSLPPS Trigger: ACTGGGAGGGAGAGAAGGTCAGGTAGTGAGCAAAGG...AGTTTGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR GCA 90 bp | GACATCTCCCTTTCTAGACTTGATAGGACAGTGGTCCACACGTTTCTTCACTCCGCACACCCACACATCTaGGGCTGCTGCAGGTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DISLSRLDRTVVHTFLHSAHPHI*GCCRCS Trigger: CGAACACCTGCAGCAGCCGCAGATGTGTGGGTGTGC...GGAGTGAAGAAACGTGTGGACCACTGTCCTATCAAGTCTAGAAAGGGAGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR CCA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGGAGAAAACAAAGGGCTaGTTCTGTGGTAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLNSLVPDGGLLALCSLEKTKG*FCGRLL Trigger: CAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTC...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CCA 90 bp | TGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: WFCGRLLSNSVPSSSFPVGHSGK*TVLSGS Trigger: GGATCCTGACAATACTGTCCATTTGCCTGAGTGCCC...CACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS CCA 90 bp | TCCTACTCCAGCTATGGGCCACTGGGTTCCGCCCTCAACTCGCACTaGCTCCGTTGTCCCTCCCACCGCTGTTCCGCGCCCCGCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYSSYGPLGSALNSH*LRCPSHRCSAPRPE Trigger: CTCGGGGCGGGGCGCGGAACAGCGGTGGGAGGGACAACGGAGCCAGTGCGAGTTGAGGGCGGAACCCAGTGGCCCATAGCTGGAGTAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS GCA 90 bp | CCGGATTTGTCCCGACTGGACGACCCCACTCCCGCCACACCCAGCTaGCCCCTGTCCAGCACACCCACACATCTGCGGCTGCTGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PDLSRLDDPTPATPS*PLSSTPTHLRLLQV Trigger: CACCTGCAGCAGCCGCAGATGTGTGGGTGTGCTGGACAGGGGGCAGCTGGGTGTGGCGGGAGTGGGGTCGTCCAGTCGGGACAAATCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR CAA 90 bp | AGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGCCCTGGTCCCAGCCCTaGATAACCTGGCCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVPDGGLLALCSLLQFWPWSQP*ITWPVP Trigger: TGGCACTGGCCAGGTTATCAAGGGCTGGGACCAGGG...CCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | AACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCATCTGCAGCTTCCGTTaGCCTTCGGCCCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLVPDGGLLALCSLLQFICSFR*PSAPVA Trigger: AGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGAT...GAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | TTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGATCTGCAGCTTCCGTTaGCCTTCGGCCCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNSLVPDGGLLALCSLLQICSFR*PSAPVA Trigger: AGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGAT...CTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGTCCCAGCCCTTGATAACCTGGCCAGTGCCAAGGGAGAAAACAAAGGGCATCTGCAGCTTCCGTTaGCCTTCGGCCCCCGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWSQPLITWPVPREKTKGICSFR*PSAPVA Trigger: AGCCACGGGGGCCGAAGGCAAACGGAAGCTGCAGAT...GCCCTTTGTTTTCTCCCTTGGCACTGGCCAGGTTATCAAGGGCTGGGACCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR CAA 90 bp | TTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGCCCTGGTCCCAGCCCTaGATAACCTGGCCAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNSLVPDGGLLALCSLLQPWSQP*ITWPVP Trigger: TGGCACTGGCCAGGTTATCAAGGGCTGGGACCAGGG...CTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | CTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCCCCTCAAACACCAGGGTaGCTCCACCTGGGATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPDGGLLALCSLLQFWSPQTPG*LHLGSL Trigger: CAAAGATCCCAGGTGGAGCAACCCTGGTGTTTGAGG...GGACCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | TGGCCAGTGCCAAGGGAGAAAACAAAGGGCTGGTTCTGTGGTAGGCTGCTGTCACCCAACTCTGAGCTCTaGGGGGCCTCCGGGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: WPVPREKTKGWFCGRLLSPNSEL*GASGEP Trigger: GGGTTCCCCGGAGGCCCCCAAGAGCTCAGAGTTGGG...TGACAGCAGCCTACCACAGAACCAGCCCTTTGTTTTCTCCCTTGGCACTGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGTCCACACGTTTCTTCACTCCAATCTGCAGCTTCCGTTTGCCTTCGGCCCCCAACTCTGAGCTCTaGGGGGCCTCCGGGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: QWSTRFFTPICSFRLPSAPNSEL*GASGEP Trigger: GGGTTCCCCGGAGGCCCCCAAGAGCTCAGAGTTGGG...GGCCGAAGGCAAACGGAAGCTGCAGATTGGAGTGAAGAAACGTGTGGACCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS-3UTR CAA 90 bp | CTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGCTACAGTTCTGGTCCGAGCGTCTCTCAATCTaGAGCAGCTCCACCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVPDGGLLALCSLLQFWSERLSI*SSSTSN Trigger: GTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCTC...GGACCAGAACTGTAGCAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS-3UTR CAA 90 bp | GCTGGTTCTGTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGCTCGCACTGGCTCCGTaGTCCCTCCCACCGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGSVVGCCQTPSHLLAFPLALAP*SLPPLF Trigger: GAACAGCGGTGGGAGGGACAACGGAGCCAGTGCGAG...CGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCACAGAACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS TCA 90 bp | CGCAATGTTAGACCTAGTCTCCAGCAGAGGGGCCACGCCACTCACTaGCTGAAGTCCCACCTCCAACGACTGGGATCTCACGCCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RNVRPSLQQRGHATH*LKSHLQRLGSHALC Trigger: ACAGAGGGCGTGAGATCCCAGTCGTTGGAGGTGGGACTTCAGTCAGTGAGTGGCGTGGCCCCTCTGCTGGAGACTAGGTCTAACATTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS GCA 90 bp | CAGTTCCCGCTAGCCCCTTTACGCAAAGTCCAAACCCTATCTGATTaGACCGGATTTGTCCCGACTGGACGACCCCACTCCCGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: QFPLAPLRKVQTLSD*TGFVPTGRPHSRHT Trigger: GGTGTGGCGGGAGTGGGGTCGTCCAGTCGGGACAAATCCGGTGCAATCAGATAGGGTTTGGACTTTGCGTAAAGGGGCTAGCGGGAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS CCA 90 bp | GTTTGCCTTCGGCCCCCGTGGCTGCTGCCAGGGCACTCAGGCAAATaGACAGTATTGTCAGGATCCAGCTCAGCCTCATGTCTCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VCLRPPWLLPGHSGK*TVLSGSSSASCLSP Trigger: TGGACTGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCGAAGGCAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR CAA 90 bp | GTGGTAGGCTGCTGTCAAACTCCGTCCCATCTTCTAGCTTTCCCGTGTAGTGCATCTGCGCAAGGCTCCTaGGCCCCACCCTTTACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVGCCQTPSHLLAFPCSASAQGS*APPFTA Trigger: CGCCGTAAAGGGTGGGGCCAAGGAGCCTTGCGCAGA...TGCACTACACGGGAAAGCTAGAAGATGGGACGGAGTTTGACAGCAGCCTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS TCA 90 bp | TCTTCAGTTCCCGCTAGCCCCTTTACGCAAAGTCCAAACCCTATCTaGTTGCACCGGATTTGTCCCGACTGGACGACCCCACTCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVPASPFTQSPNPI*LHRICPDWTTPLPP Trigger: TGGCGGGAGTGGGGTCGTCCAGTCGGGACAAATCCGGTGCAATCAGATAGGGTTTGGACTTTGCGTAAAGGGGCTAGCGGGAACTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS-3UTR CAA 90 bp | TTGTTTTTAAACAGTCTGGTCCCTGATGGGGGCCTCCTAGCCCTCTGCAGCCTGGAGCGTCTCTCAATCTaGAGCAGCTCCACCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLNSLVPDGGLLALCSLERLSI*SSSTSN Trigger: GTTTGAGGTGGAGCTGCTCAAGATTGAGAGACGCTC...CAGGCTGCAGAGGGCTAGGAGGCCCCCATCAGGGACCAGACTGTTTAAAAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070878.9 ENSMUST00000177752.9 |
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| CDS CAA 72 bp | GCCACTGGGTTCCGCCCTCAACTCGCACTGGCTCCGTaGTCCCTCCCACCGCTGTTCCGCGCCCCGCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ATGFRPQLALAP*SLPPLFRAPPR Trigger: TCGGGGCGGGGCGCGGAACAGCGGTGGGAGGGACAACGGAGCCAGTGCGAGTTGAGGGCGGAACCCAGTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS CAA 90 bp | CGGCCCCCGTGGCTGCTGCCAGGGCACTCAGGCAAATGGACAGTATaGTCAGGATCCAGCTCAGCCTCATGTCTCAGTCCAGTGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPWLLPGHSGKWTV*SGSSSASCLSPVRR Trigger: CCTTCTCACTGGACTGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCACGGGGGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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| CDS TCA 72 bp | AGACCTAGTCTCCAGCAGAGGGGCCACGCCACTCACTaGCTGAAGTCCCACCTCCAACGACTGGGATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPSLQQRGHATH*LKSHLQRLGSH Trigger: GTGAGATCCCAGTCGTTGGAGGTGGGACTTCAGTCAGTGAGTGGCGTGGCCCCTCTGCTGGAGACTAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238181.2 |
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| CDS CAA 72 bp | TACGCAAAGTCCAAACCCTATCTGATTGCACCGGATTaGTCCCGACTGGACGACCCCACTCCCGCCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: YAKSKPYLIAPD*SRLDDPTPATP Trigger: GGGTGTGGCGGGAGTGGGGTCGTCCAGTCGGGACAAATCCGGTGCAATCAGATAGGGTTTGGACTTTGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS TCA 72 bp | CCCGCTAGCCCCTTTACGCAAAGTCCAAACCCTATCTaGTTGCACCGGATTTGTCCCGACTGGACGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PASPFTQSPNPI*LHRICPDWTTP Trigger: TGGGGTCGTCCAGTCGGGACAAATCCGGTGCAATCAGATAGGGTTTGGACTTTGCGTAAAGGGGCTAGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
||
| CDS GCA 72 bp | CTAGCCCCTTTACGCAAAGTCCAAACCCTATCTGATTaGACCGGATTTGTCCCGACTGGACGACCCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAPLRKVQTLSD*TGFVPTGRPHS Trigger: GGAGTGGGGTCGTCCAGTCGGGACAAATCCGGTGCAATCAGATAGGGTTTGGACTTTGCGTAAAGGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237119.2 ENSMUST00000238181.2 |
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| CDS CAA 72 bp | TGGCTGCTGCCAGGGCACTCAGGCAAATGGACAGTATaGTCAGGATCCAGCTCAGCCTCATGTCTCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLLPGHSGKWTV*SGSSSASCLSP Trigger: TGGACTGAGACATGAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGGCAGCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237119.2 |
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