Pregenerated sensors for FKBP1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020635

Ensembl transcript IDs: ENSMUST00000020964.7

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GTAGAGAGGACAGATAATGTGGAGGGGCGGTGGGGTCAGCACACTGATCAAGAGGAGGAGCCGTCCCAGTaGCAGAGAGAGCAGGCTAGG	+
Preference number: 2 (lower is better) Translates to: VERTDNVEGRWGQHTDQEEEPSQ*QREQAR Trigger: CCTAGCCTGCTCTCTCTGCCACTGGGACGGCTCCTC...CTCTTGATCAGTGTGCTGACCCCACCGCCCCTCCACATTATCTGTCCTCTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
3UTR-3UTR CCA 90 bp	CTCAAGTCCCTCCATGTAACCATGTACAGCACATGTCTGAGCACCTTGTATGTCAGAGGACAGATAATGTaGAGGGGCGGTGGGGTCAGC	+
Preference number: 2 (lower is better) Translates to: LKSLHVTMYSTCLSTLYVRGQIM*RGGGVS Trigger: GCTGACCCCACCGCCCCTCCACATTATCTGTCCTCT...GACATACAAGGTGCTCAGACATGTGCTGTACATGGTTACATGGAGGGACTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
3UTR-3UTR CCA 90 bp	AATGTGCAGTCTGAAATGTCTGGATCTGAACTAAGGTTTTCTCAAGCAGAGGTGACAGAGAGAGCACGATaGGTAGAGAGGACAGATAAT	+
Preference number: 2 (lower is better) Translates to: NVQSEMSGSELRFSQAEVTERAR*VERTDN Trigger: ATTATCTGTCCTCTCTACCCATCGTGCTCTCTCTGT...CACCTCTGCTTGAGAAAACCTTAGTTCAGATCCAGACATTTCAGACTGCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
CDS-3UTR CCA 90 bp	GAGAGAGCACGATGGGTAGAGAGGACAGATAATGTGGAGGGGCGGTGGGGTCAGTGTCCTTCCGTCTCCTaGGGAGATGGTCTCGATCTC	+
Preference number: 4 (lower is better) Translates to: ERARWVERTDNVEGRWGQCPSVS*GDGLDL Trigger: GAGATCGAGACCATCTCCCCAGGAGACGGAAGGACA...CTGACCCCACCGCCCCTCCACATTATCTGTCCTCTCTACCCATCGTGCTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
CDS-3UTR GCA 90 bp	CAAAATGTGCAGTCTGAAATGTCTGGATCTGAACTAAGGTTTTCTCAAGCAGAGAGGCCACATCAGGGGTaGAGGTCAGCTTCGCCCTCT	+
Preference number: 4 (lower is better) Translates to: QNVQSEMSGSELRFSQAERPHQG*RSASPS Trigger: AGAGGGCGAAGCTGACCTGCACCCCTGATGTGGCCT...CTCTGCTTGAGAAAACCTTAGTTCAGATCCAGACATTTCAGACTGCACATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
CDS-3UTR TCA 90 bp	AATGTGCAGTCTGAAATGTCTGGATCTGAACTAAGGTTTTCTCAAGCAGAGGTGTGCACCACACATATCTaGCCCTTCTTAGGGAATGTC	+
Preference number: 4 (lower is better) Translates to: NVQSEMSGSELRFSQAEVCTTHI*PFLGNV Trigger: GACATTCCCTAAGAAGGGTCAGATATGTGTGGTGCA...CACCTCTGCTTGAGAAAACCTTAGTTCAGATCCAGACATTTCAGACTGCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
CDS-3UTR CAA 90 bp	GTAGAGAGGACAGATAATGTGGAGGGGCGGTGGGGTCAGCACACTGATCAAGAGAAGATGAGGGTGGCATaGGGAGGGATGACACCGGGG	+
Preference number: 5 (lower is better) Translates to: VERTDNVEGRWGQHTDQEKMRVA*GGMTPG Trigger: CCCCGGTGTCATCCCTCCCAATGCCACCCTCATCTT...CTCTTGATCAGTGTGCTGACCCCACCGCCCCTCCACATTATCTGTCCTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020964.7
CDS-3UTR CAA 90 bp	AATGTGCAGTCTGAAATGTCTGGATCTGAACTAAGGTTTTCTCAAGCAGAGGTGAAATTTCTTGCCATTTaGAAGCATTCCTGTGTAGTG	+
Preference number: 5 (lower is better) Translates to: NVQSEMSGSELRFSQAEVKFLAI*KHSCVV Trigger: CACTACACAGGAATGCTTCAAAATGGCAAGAAATTT...CACCTCTGCTTGAGAAAACCTTAGTTCAGATCCAGACATTTCAGACTGCACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020964.7