Pregenerated sensors for FKBP11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003355

Ensembl transcript IDs: ENSMUST00000003445.8

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCAGATTCCGTGCACGATTCAGGGGGCTGCACCAGGGTCTCCACTTaGAGGGTCCGGACAGGACTTTCGGTTTCTGGCCCAGCCTCAGCC	+
Preference number: 5 (lower is better) Translates to: ADSVHDSGGCTRVST*RVRTGLSVSGPASA Trigger: GGCTGAGGCTGGGCCAGAAACCGAAAGTCCTGTCCGGACCCTCCAAGTGGAGACCCTGGTGCAGCCCCCTGAATCGTGCACGGAATCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS TCA 90 bp	GACTTTCGGTTTCTGGCCCAGCCTCAGCCCGGCACACCGCCCCACTaGACAGTAGCAGCAGTAACAGCTGGAGTGGTAGGAGCAAAGGGC	+
Preference number: 5 (lower is better) Translates to: DFRFLAQPQPGTPPH*TVAAVTAGVVGAKG Trigger: GCCCTTTGCTCCTACCACTCCAGCTGTTACTGCTGCTACTGTTCAGTGGGGCGGTGTGCCGGGCTGAGGCTGGGCCAGAAACCGAAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 90 bp	AGCGTGTCTCCAATGGCAGCAGATTCCGTGCACGATTCAGGGGGCTaGACCAGGGTCTCCACTTGGAGGGTCCGGACAGGACTTTCGGTT	+
Preference number: 5 (lower is better) Translates to: SVSPMAADSVHDSGG*TRVSTWRVRTGLSV Trigger: AACCGAAAGTCCTGTCCGGACCCTCCAAGTGGAGACCCTGGTGCAGCCCCCTGAATCGTGCACGGAATCTGCTGCCATTGGAGACACGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS TCA 90 bp	AGCTTCTTTTTGGAGACTTTGGGTCTGCTGGCCTTTCTGTACAGGTaGTACCCGATCAGCCCCAGGAGCGCCGGCACCATGGCGATGCCT	+
Preference number: 5 (lower is better) Translates to: SFFLETLGLLAFLYR*YPISPRSAGTMAMP Trigger: AGGCATCGCCATGGTGCCGGCGCTCCTGGGGCTGATCGGGTATCACCTGTACAGAAAGGCCAGCAGACCCAAAGTCTCCAAAAAGAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 90 bp	GCCCCAGGAGCGCCGGCACCATGGCGATGCCTACCAGAGGCAAAATaGTCTTTAGCAGCTTCTGCCAGTAGTTGGCTCGAATCAAAGCGA	+
Preference number: 5 (lower is better) Translates to: APGAPAPWRCLPEAK*SLAASASSWLESKR Trigger: TCGCTTTGATTCGAGCCAACTACTGGCAGAAGCTGCTAAAGAGCATTTTGCCTCTGGTAGGCATCGCCATGGTGCCGGCGCTCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 90 bp	ACAGGTGATACCCGATCAGCCCCAGGAGCGCCGGCACCATGGCGATaGCTACCAGAGGCAAAATGCTCTTTAGCAGCTTCTGCCAGTAGT	+
Preference number: 5 (lower is better) Translates to: TGDTRSAPGAPAPWR*LPEAKCSLAASASS Trigger: ACTACTGGCAGAAGCTGCTAAAGAGCATTTTGCCTCTGGTAGGCATCGCCATGGTGCCGGCGCTCCTGGGGCTGATCGGGTATCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 90 bp	TTCTGTACAGGTGATACCCGATCAGCCCCAGGAGCGCCGGCACCATaGCGATGCCTACCAGAGGCAAAATGCTCTTTAGCAGCTTCTGCC	+
Preference number: 5 (lower is better) Translates to: FCTGDTRSAPGAPAP*RCLPEAKCSLAASA Trigger: GGCAGAAGCTGCTAAAGAGCATTTTGCCTCTGGTAGGCATCGCCATGGTGCCGGCGCTCCTGGGGCTGATCGGGTATCACCTGTACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 90 bp	CATCTACCAAACTGCCCGTGTAGTGTATGTGGAGCGTGTCTCCAATaGCAGCAGATTCCGTGCACGATTCAGGGGGCTGCACCAGGGTCT	+
Preference number: 5 (lower is better) Translates to: HLPNCPCSVCGACLQ*QQIPCTIQGAAPGS Trigger: AGACCCTGGTGCAGCCCCCTGAATCGTGCACGGAATCTGCTGCCATTGGAGACACGCTCCACATACACTACACGGGCAGTTTGGTAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 90 bp	AATCAAAGCGATCAGCTCCACATCGTACTGCACCACTGCATCGGCTaGGATAGATGGCGGGTACCCTCGCTTTCCATAAGCCAGGTGAGA	+
Preference number: 5 (lower is better) Translates to: NQSDQLHIVLHHCIG*DRWRVPSLSISQVR Trigger: TCTCACCTGGCTTATGGAAAGCGAGGGTACCCGCCATCTATCCCAGCCGATGCAGTGGTGCAGTACGATGTGGAGCTGATCGCTTTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 72 bp	CCAATGGCAGCAGATTCCGTGCACGATTCAGGGGGCTaGACCAGGGTCTCCACTTGGAGGGTCCGGACAGGA	+
Preference number: 6 (lower is better) Translates to: PMAADSVHDSGG*TRVSTWRVRTG Trigger: TCCTGTCCGGACCCTCCAAGTGGAGACCCTGGTGCAGCCCCCTGAATCGTGCACGGAATCTGCTGCCATTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	GTGCACGATTCAGGGGGCTGCACCAGGGTCTCCACTTaGAGGGTCCGGACAGGACTTTCGGTTTCTGGCCCA	+
Preference number: 6 (lower is better) Translates to: VHDSGGCTRVST*RVRTGLSVSGP Trigger: TGGGCCAGAAACCGAAAGTCCTGTCCGGACCCTCCAAGTGGAGACCCTGGTGCAGCCCCCTGAATCGTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 72 bp	ACCCGATCAGCCCCAGGAGCGCCGGCACCATGGCGATaGCTACCAGAGGCAAAATGCTCTTTAGCAGCTTCT	+
Preference number: 6 (lower is better) Translates to: TRSAPGAPAPWR*LPEAKCSLAAS Trigger: AGAAGCTGCTAAAGAGCATTTTGCCTCTGGTAGGCATCGCCATGGTGCCGGCGCTCCTGGGGCTGATCGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 72 bp	GTATGTGGAGCGTGTCTCCAATGGCAGCAGATTCCGTaGACGATTCAGGGGGCTGCACCAGGGTCTCCACTT	+
Preference number: 6 (lower is better) Translates to: VCGACLQWQQIP*TIQGAAPGSPL Trigger: AAGTGGAGACCCTGGTGCAGCCCCCTGAATCGTGCACGGAATCTGCTGCCATTGGAGACACGCTCCACATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 72 bp	GCGCCGGCACCATGGCGATGCCTACCAGAGGCAAAATaGTCTTTAGCAGCTTCTGCCAGTAGTTGGCTCGAA	+
Preference number: 6 (lower is better) Translates to: APAPWRCLPEAK*SLAASASSWLE Trigger: TTCGAGCCAACTACTGGCAGAAGCTGCTAAAGAGCATTTTGCCTCTGGTAGGCATCGCCATGGTGCCGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	AACTGCCCGTGTAGTGTATGTGGAGCGTGTCTCCAATaGCAGCAGATTCCGTGCACGATTCAGGGGGCTGCA	+
Preference number: 6 (lower is better) Translates to: NCPCSVCGACLQ*QQIPCTIQGAA Trigger: TGCAGCCCCCTGAATCGTGCACGGAATCTGCTGCCATTGGAGACACGCTCCACATACACTACACGGGCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	CACATCGTACTGCACCACTGCATCGGCTGGGATAGATaGCGGGTACCCTCGCTTTCCATAAGCCAGGTGAGA	+
Preference number: 6 (lower is better) Translates to: HIVLHHCIGWDR*RVPSLSISQVR Trigger: TCTCACCTGGCTTATGGAAAGCGAGGGTACCCGCCATCTATCCCAGCCGATGCAGTGGTGCAGTACGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	GATCAGCTCCACATCGTACTGCACCACTGCATCGGCTaGGATAGATGGCGGGTACCCTCGCTTTCCATAAGC	+
Preference number: 6 (lower is better) Translates to: DQLHIVLHHCIG*DRWRVPSLSIS Trigger: GCTTATGGAAAGCGAGGGTACCCGCCATCTATCCCAGCCGATGCAGTGGTGCAGTACGATGTGGAGCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS GCA 72 bp	TTGGCTCGAATCAAAGCGATCAGCTCCACATCGTACTaGACCACTGCATCGGCTGGGATAGATGGCGGGTAC	+
Preference number: 6 (lower is better) Translates to: LARIKAISSTSY*TTASAGIDGGY Trigger: GTACCCGCCATCTATCCCAGCCGATGCAGTGGTGCAGTACGATGTGGAGCTGATCGCTTTGATTCGAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	AAAAGGCTCTGCTCCAGACCTGGAATCACCTGCTTTTaGCCGAGTTCTATGACCAGAGGATCTCTGGTCAGA	+
Preference number: 6 (lower is better) Translates to: KRLCSRPGITCF*PSSMTRGSLVR Trigger: TCTGACCAGAGATCCTCTGGTCATAGAACTCGGCCAAAAGCAGGTGATTCCAGGTCTGGAGCAGAGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003445.8
CDS CCA 72 bp	GAGGCAAAATGCTCTTTAGCAGCTTCTGCCAGTAGTTaGCTCGAATCAAAGCGATCAGCTCCACATCGTACT	+
Preference number: 6 (lower is better) Translates to: EAKCSLAASASS*LESKRSAPHRT Trigger: AGTACGATGTGGAGCTGATCGCTTTGATTCGAGCCAACTACTGGCAGAAGCTGCTAAAGAGCATTTTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003445.8