Pregenerated sensors for FKBP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001555Ensembl transcript IDs: ENSMUST00000001595.10, ENSMUST00000107400.3, ENSMUST00000134815.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCTaGGGCAGAAGAACGCAGGCTCTCGTCACTCAGATTCATGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: ENGGQLEPPLPEEQS*GRRTQALVTQIHAP Trigger: AGGGGCATGAATCTGAGTGACGAGAGCCTGCGTTCTTCTGCCTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 90 bp | GTTCTGCACCATTCGGGGGCAGTAGGGAGGGCGCAGGAGGATAGTTaGCTGCACCGTGTCTGCTTTGTTCCACACGTCCAGCAGGACCAC | + |
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Preference number: 1 (lower is better) Translates to: VLHHSGAVGRAQEDS*LHRVCFVPHVQQDH Trigger: GTGGTCCTGCTGGACGTGTGGAACAAAGCAGACACGGTGCAGTCAACTATCCTCCTGCGCCCTCCCTACTGCCCCCGAATGGTGCAGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR TCA 90 bp | GCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATCCCAGGGATaGTGTAACCCTGCCCGACATAGGTATTGTAGGTGTGGTTTCGGG | + |
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Preference number: 1 (lower is better) Translates to: APLCMRLAAPGPSQG*CNPARHRYCRCGFG Trigger: CCCGAAACCACACCTACAATACCTATGTCGGGCAGGGTTACATCATCCCTGGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR GCA 90 bp | AGTCCAAGACCCTGCCCACCTTCCTCCCCTCAGATTAGCACCAAGTaGAGGTTCTCGAAACCCTTGGGCCTGAGCAGGCTTTCCTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: SPRPCPPSSPQISTK*RFSKPLGLSRLSSY Trigger: GTAAGAGGAAAGCCTGCTCAGGCCCAAGGGTTTCGAGAACCTGCACTTGGTGCTAATCTGAGGGGAGGAAGGTGGGCAGGGTCTTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR CCA 90 bp | GGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACGTCTaGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCGTGCCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: GDREMGQDSTNKGHV*ESEGPRSSPLPCLV Trigger: CACTAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 90 bp | AGGAAGAGGCTTAGGGTTGGACGAGAAAAACACAGATGTCTGTGCTaGGAACTGAAAGCCACGGCCCATGCGTGGGAAGACCACAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: RKRLRVGREKHRCLC*ELKATAHAWEDHSS Trigger: ACTACTGTGGTCTTCCCACGCATGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACCCTAAGCCTCTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 90 bp | TGTGGGGTTCGCGATGGCCCTAACCAAATCTCAGTGCCTCCTCCCTaGACTGGATCTGTCACAAGAACCTTAAGGAAGAGGCTTAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: CGVRDGPNQISVPPP*TGSVTRTLRKRLRV Trigger: AACCCTAAGCCTCTTCCTTAAGGTTCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGAGATTTGGTTAGGGCCATCGCGAACCCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 90 bp | CCTTTTATTGACACAAAGGAGAAAGGACTGGATCAGTTTAGCCTTTaGGTCCAAGACCCTGCCCACCTTCCTCCCCTCAGATTAGCACCA | + |
|
Preference number: 1 (lower is better) Translates to: PFIDTKEKGLDQFSL*VQDPAHLPPLRLAP Trigger: TGGTGCTAATCTGAGGGGAGGAAGGTGGGCAGGGTCTTGGACTCAAAGGCTAAACTGATCCAGTCCTTTCTCCTTTGTGTCAATAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR TCA 90 bp | GTAATCCTCCTTCGCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATCCCACCTGGTCCATGCCTTTaGTCAGCCAACCAGAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: VILLRSPMHAPCSPWSIPPGPCL*SANQSR Trigger: TCGGCTCTGGTTGGCTGATCAAAGGCATGGACCAGG...TGGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAGGATTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGGACGAGAAAAACACAGATGTCTGTGCTGAGAACTGAAAGCCACGGCCCACAGCTCCATGCCCACTaGCCCCCAGCCGAGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GWTRKTQMSVLRTESHGPQLHAH*PPAEGP Trigger: AGGCCCCTCGGCTGGGGGGCAGTGGGCATGGAGCTG...TGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGCCTAGTGACGTGAGATaGGAGGATGGGTGTGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: EEKSENGGQLEPPLPEEQPSDVR*EDGCVG Trigger: CCCCACACACCCATCCTCCCATCTCACGTCACTAGG...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGAGTCCAAGACCCTGCCCACCTTCCTCCCCTCAGATTAGCACCAAGTGCCCGTGCCTAGTGACGTaGGATGGGAGGATGGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: PLSPRPCPPSSPQISTKCPCLVT*DGRMGV Trigger: CACACCCATCCTCCCATCTCACGTCACTAGGCACGG...GCACTTGGTGCTAATCTGAGGGGAGGAAGGTGGGCAGGGTCTTGGACTCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCTGAGTCAGTGCCTCCTCCCTaGACTGGATCTGTCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: RVRMVGSWSHPFLRSRAESVPPP*TGSVTR Trigger: TCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGA...CTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR GCA 90 bp | CACAGTAATCCTCCTTCGCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATTGTAGGTGTCATAAGTaGCTCCCCTACTGTAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSNPPSLPYACALQPLVHCRCHK*LPYCSC Trigger: ACAGCTACAGTAGGGGAGGCACTTATGACACCTACA...ATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAGGATTACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGGTCCATGCCTTTGATCAGCCAACCAGAGCCGATGTAGGTGTCATAAGTTGTTGTCAAAGGCAGTaGCATCCAGCAGAGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PLVHAFDQPTRADVGVISCCQRQ*HPAECH Trigger: ATGGCACTCTGCTGGATGGCACTGCCTTTGACAACA...ACTTATGACACCTACATCGGCTCTGGTTGGCTGATCAAAGGCATGGACCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTTATTGACACAAAGGAGAAAGGACTGGATCAGTTTAGCCTTTGAGTCCAAGCCTGCAGAGCTGCCATaGCAGAGGGGACGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LLLTQRRKDWISLAFESKPAELP*QRGRGQ Trigger: CTGTCCCCGTCCCCTCTGTCATGGCAGCTCTGCAGG...CTTGGACTCAAAGGCTAAACTGATCCAGTCCTTTCTCCTTTGTGTCAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR CAA 90 bp | CCTTCCTCCCCTCAGATTAGCACCAAGTGCAGGTTCTCGAAACCCTaGGGCCTGAGCAGGCTTTCCTCTTACACAACCTTTCATTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PSSPQISTKCRFSKP*GLSRLSSYTTFHFR Trigger: TCTAAAATGAAAGGTTGTGTAAGAGGAAAGCCTGCTCAGGCCCAAGGGTTTCGAGAACCTGCACTTGGTGCTAATCTGAGGGGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR GCA 90 bp | GCCCGACATAGGTATTGTAGGTGTGGTTTCGGGAGTAGCTGGAATCAAAGAGGGAGGAGGATAGTTGACTaGACCGTGTCTGCTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ARHRYCRCGFGSSWNQRGRRIVD*TVSALF Trigger: GAACAAAGCAGACACGGTGCAGTCAACTATCCTCCT...CCCTCTTTGATTCCAGCTACTCCCGAAACCACACCTACAATACCTATGTCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTCGCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATCCCAGGGATGACCGTGTCCTTCGGGTaGTGGACATCCAGCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LLRSPMHAPCSPWSIPGMTVSFG*WTSSSR Trigger: CCTGCTGCTGGATGTCCACAACCCGAAGGACACGGT...CATCCCTGGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR TCA 72 bp | GGACCAAGAAGCTCACCCTTGCCGTGCCTAGTGACGTaGGATGGGAGGATGGGTGTGTGGGGTTCGCGATGG | + |
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Preference number: 3 (lower is better) Translates to: GPRSSPLPCLVT*DGRMGVWGSRW Trigger: CCATCGCGAACCCCACACACCCATCCTCCCATCTCACGTCACTAGGCACGGCAAGGGTGAGCTTCTTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | GGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCTaGGGCAGAAGAACGCAGGCTCTCGTCACTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: GQLEPPLPEEQS*GRRTQALVTQI Trigger: AATCTGAGTGACGAGAGCCTGCGTTCTTCTGCCTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR GCA 72 bp | AGGCAGAAGAACGCAGGCTCTCGTCACTCAGATTCATaGCCCTGCAGAGCTGCCATGACAGAGGGGACGGGG | + |
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Preference number: 3 (lower is better) Translates to: RQKNAGSRHSDS*PCRAAMTEGTG Trigger: CCCCGTCCCCTCTGTCATGGCAGCTCTGCAGGGGCATGAATCTGAGTGACGAGAGCCTGCGTTCTTCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR CCA 72 bp | TGGCTTGGGAGGAGAAGAGTGAGAATGGTGGGCAGCTaGAGCCACCCCTTCCTGAGGAGCAGAGCTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: WLGRRRVRMVGS*SHPFLRSRAEA Trigger: TGCCTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTCCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | CATTCGGGGGCAGTAGGGAGGGCGCAGGAGGATAGTTaGCTGCACCGTGTCTGCTTTGTTCCACACGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: HSGAVGRAQEDS*LHRVCFVPHVQ Trigger: CTGGACGTGTGGAACAAAGCAGACACGGTGCAGTCAACTATCCTCCTGCGCCCTCCCTACTGCCCCCGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR GCA 72 bp | CCCTGCCCACCTTCCTCCCCTCAGATTAGCACCAAGTaGAGGTTCTCGAAACCCTTGGGCCTGAGCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PCPPSSPQISTK*RFSKPLGLSRL Trigger: AAGCCTGCTCAGGCCCAAGGGTTTCGAGAACCTGCACTTGGTGCTAATCTGAGGGGAGGAAGGTGGGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | CGTGGGAAGACCACAGTAGTCTCCACTGATATCCAGTaGCTCCCAGAGTTATTCCCCCTGACGGATCGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RGKTTVVSTDIQ*LPELFPLTDRG Trigger: CCCCCGATCCGTCAGGGGGAATAACTCTGGGAGTCACTGGATATCAGTGGAGACTACTGTGGTCTTCCCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | TGCATGCGCCTTGCAGCCCCTGGTCCATCCCAGGGATaGTGTAACCCTGCCCGACATAGGTATTGTAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: CMRLAAPGPSQG*CNPARHRYCRC Trigger: ACACCTACAATACCTATGTCGGGCAGGGTTACATCATCCCTGGGATGGACCAGGGGCTGCAAGGCGCATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTCAGTGCCTCCTCCCTGAACTGGATCTGTCACAAGAACCTTAAGGAAGAGCCAGCCGAGGGGCCTTaGTGTCTGAGGTCAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: NLSASSLNWICHKNLKEEPAEGP*CLRSGL Trigger: CAGGCCTGACCTCAGACACAAAGGCCCCTCGGCTGG...CTCTTCCTTAAGGTTCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR CAA 90 bp | GCCCGACATAGGTATTGTAGGTGTGGTTTCGGGAGTAGCTGGAATCAAAGAGGGCCCTGGTCCATGCCTTaGATCAGCCAACCAGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: ARHRYCRCGFGSSWNQRGPWSMP*ISQPEP Trigger: CGGCTCTGGTTGGCTGATCAAAGGCATGGACCAGGG...CCCTCTTTGATTCCAGCTACTCCCGAAACCACACCTACAATACCTATGTCGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| 3UTR CCA 72 bp | GAACTTCTTAAGATGAGAGACCTGACCCCGGTGGCTTaGGAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: ELLKMRDLTPVA*EEKSENGGQLE Trigger: CTCCAGCTGCCCACCATTCTCACTCTTCTCCTCCCAAGCCACCGGGGTCAGGTCTCTCATCTTAAGAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | CTTAGGGTTGGACGAGAAAAACACAGATGTCTGTGCTaGGAACTGAAAGCCACGGCCCATGCGTGGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LRVGREKHRCLC*ELKATAHAWED Trigger: GTCTTCCCACGCATGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACCCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | GACACAAAGGAGAAAGGACTGGATCAGTTTAGCCTTTaGGTCCAAGACCCTGCCCACCTTCCTCCCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: DTKEKGLDQFSL*VQDPAHLPPLR Trigger: TCTGAGGGGAGGAAGGTGGGCAGGGTCTTGGACTCAAAGGCTAAACTGATCCAGTCCTTTCTCCTTTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR CCA 72 bp | GAGATGGGACAGGACAGTACAAATAAAGGGCACGTCTaGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCG | + |
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Preference number: 3 (lower is better) Translates to: EMGQDSTNKGHV*ESEGPRSSPLP Trigger: CGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCCCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR-3UTR CAA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCGGAAGAGGCTTAGGGTaGGACGAGAAAAACACAGAT | + |
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Preference number: 3 (lower is better) Translates to: GQDSTNKGHVWESEGPRSGRGLG*DEKNTD Trigger: ATCTGTGTTTTTCTCGTCCAACCCTAAGCCTCTTCC...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR TCA 72 bp | TTAGCACCAAGTGCAGGTTCTCGAAACCCTTGGGCCTaGGCAGGCTTTCCTCTTACACAACCTTTCATTTTA | + |
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Preference number: 3 (lower is better) Translates to: LAPSAGSRNPWA*AGFPLTQPFIL Trigger: TAAAATGAAAGGTTGTGTAAGAGGAAAGCCTGCTCAGGCCCAAGGGTTTCGAGAACCTGCACTTGGTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | CACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCGTGCCTAGTGACGCCGCCACACCGATGCTaGCGTAGCCCAGGTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HVWESEGPRSSPLPCLVTPPHRC*RSPGGE Trigger: CTCCCCACCTGGGCTACGGCAGCATCGGTGTGGCGG...CGTCACTAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCCGATGGAGGGTGTaGCTGGAGGACCCCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQSRWRV*LEDPTR Trigger: CCTTGTGGGGTCCTCCAGCCACACCCTCCATCGGCT...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACGCTCCATTCTCCCCGTaGGCCAGGTGTGGGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHAPFSP*ARCGGT Trigger: TGTGCCCCCACACCTGGCCCACGGGGAGAATGGAGC...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGCCTATGCATGCGCCTTaGAGCCCCTGGTCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQPMHAP*SPWSIP Trigger: TGGGATGGACCAGGGGCTGCAAGGCGCATGCATAGG...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | CTCCTTCGCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATCCCAGGGATGCAGGCCCGAGGGATGTaGTATCTCTCGATGACCACA | + |
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Preference number: 4 (lower is better) Translates to: LLRSPMHAPCSPWSIPGMQARGM*YLSMTT Trigger: TGTGGTCATCGAGAGATACCACATCCCTCGGGCCTG...CATCCCTGGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| CDS-3UTR CCA 90 bp | AGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCTGAGTCCAGCGTCTCCAGCTaGACCGTGTCCTTCGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RVRMVGSWSHPFLRSRAESSVSS*TVSFGL Trigger: CAACCCGAAGGACACGGTCCAGCTGGAGACGCTGGA...CTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACGCGCCTTGCAGCCCCTaGTCCATCCCAGGGATGATG | + |
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Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHAPCSP*SIPGMM Trigger: CATCATCCCTGGGATGGACCAGGGGCTGCAAGGCGC...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACGGTGTGGGGGCACAATaGGCTGCCTCCTCTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHGVGAQ*AASSLL Trigger: TAGGAGAGAGGAGGCAGCTCATTGTGCCCCCACACC...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGGGTCTTGCCCAGGCATaGGGCGTCCTTTGCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQGLAQA*GVLCLH Trigger: ATGAAGGCAAAGGACGCCTCATGCCTGGGCAAGACC...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACAGTATGCGGAGCCGATaGAGGGTGTGGCTGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHSMRSR*RVWLED Trigger: GTCCTCCAGCCACACCCTCCATCGGCTCCGCATACT...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | CACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCGTGCCTAGTGACGCCTACACACATGCCCTaGAGGCCCCTGTCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: HVWESEGPRSSPLPCLVTPTHMP*RPLSRP Trigger: AGGTCTGGACAGGGGCCTGCAGGGCATGTGTGTAGG...CGTCACTAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACGATGGAGGGTGTGGCTaGAGGACCCCACAAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHDGGCG*RTPQGT Trigger: TGTTCCTTGTGGGGTCCTCCAGCCACACCCTCCATC...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCCGCCGGACACAGCCCTaGGGCAGCTCCAGCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSTNKGHVWESEGPRSRRTQP*GSSSVS Trigger: GGAGACGCTGGAGCTGCCCCAGGGCTGTGTCCGGCG...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | ATTGTAGTGGTAACGCATGAAGTCCCCCGCCACAGCTCGCCGGACACAGCCCTGGGGGATGAGGCCCGCTaGAGTCAAACTTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IVVVTHEVPRHSSPDTALGDEAR*SQTFSR Trigger: ACGGGAAAAAGTTTGACTCCAGCGGGCCTCATCCCC...CAGGGCTGTGTCCGGCGAGCTGTGGCGGGGGACTTCATGCGTTACCACTACAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| CDS-3UTR TCA 90 bp | GACCAGGGAGGCCTGCGGGGGTATCACAGTCCCATAGCCTTTCTCCCCATAAGCTGTGGTATCTCTCGATaGCCACATCTTCCAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQGGLRGYHSPIAFLPISCGISR*PHLPRG Trigger: CCCCCTTGGAAGATGTGGTCATCGAGAGATACCACA...GCTTATGGGGAGAAAGGCTATGGGACTGTGATACCCCCGCAGGCCTCCCTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGGACGAGAAAAACACAGATGTCTGTGCTGAGAACTGAAAGCCACGGCCCATCGCTCCCCTATGCATaGGCCTTGCAGCCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWTRKTQMSVLRTESHGPSLPYA*ALQPLV Trigger: GACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGA...TGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | CCTTTGAGTCCAAGACCCTGCCCACCTTCCTCCCCTCAGATTAGCACCAAGTGCCAGGCCCGAGGGATGTaGTATCTCTCGATGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSPRPCPPSSPQISTKCQARGM*YLSMTT Trigger: TGTGGTCATCGAGAGATACCACATCCCTCGGGCCTG...GCACTTGGTGCTAATCTGAGGGGAGGAAGGTGGGCAGGGTCTTGGACTCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGACTGATGGTTTTGTCTaGGTCTTGCCCAGGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQTDGFV*VLPRHE Trigger: CTCATGCCTGGGCAAGACCCAGACAAAACCATCAGT...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGTTCCGGTCCTGGTTCTaGAACATGTCACTGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQFRSWF*NMSLMV Trigger: AACCATCAGTGACATGTTTCAGAACCAGGACCGGAA...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGTCCCGTCTTCGAAAGTaGCATTGTAGTGGTAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEKSENGGQLEPPLPEEQSRLRK*HCSGNA Trigger: TGCGTTACCACTACAATGGCACTTTCGAAGACGGGA...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | AGTAATCCTCCTTCGCTCCCCTATGCATGCGCCTTGCAGCCCCTGGTCCATCCCTCCCGTCTTCGAAAGTaGCATTGTAGTGGTAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNPPSLPYACALQPLVHPSRLRK*HCSGNA Trigger: TGCGTTACCACTACAATGGCACTTTCGAAGACGGGA...GGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGGGAGCGAAGGAGGATTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134815.2 |
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| CDS-3UTR GCA 90 bp | AGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGAGCTGAGTGTAGGTGTCATAAGTaGCTCCCCTACTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVRMVGSWSHPFLRSRAECRCHK*LPYCSC Trigger: ACAGCTACAGTAGGGGAGGCACTTATGACACCTACA...CTCAGCTCTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR GCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACTTTTGGATGTCTCATTaGAGTTCTCAGGAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHFWMSH*SSQEAG Trigger: CCCGGCCTCCTGAGAACTGCAATGAGACATCCAAAA...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR TCA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCCGTGCACATCGAAGATaGGCACAGCCGAGCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQDSTNKGHVWESEGPRSRAHRR*AQPSQG Trigger: TCCCTGGCTCGGCTGTGCTCATCTTCGATGTGCACG...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR GCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACTGGAAGTCGATGACGTaGACATCGAAGATGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHWKSMT*TSKMST Trigger: TGTGCTCATCTTCGATGTGCACGTCATCGACTTCCA...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CCA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCCAAACAGGTAGCCTGTaGGCAGGCCATCCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDSTNKGHVWESEGPRSQTGSL*AGHPLG Trigger: CCCGAGAGGATGGCCTGCCCACAGGCTACCTGTTTG...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | CACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCGTGCCTAGTGACGGGAAGAGAACTCTTCTaGGGGCACCTCTCCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVWESEGPRSSPLPCLVTGRELF*GHLSIF Trigger: AAAGATGGAGAGGTGCCCCCAGAAGAGTTCTCTTCC...CGTCACTAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACTTGCCTTCATTCACTTaGGCCTTGATGAAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTGGDREMGQDSTNKGHLPSFT*ALMKEE Trigger: CTCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAA...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | GGTTGGACGAGAAAAACACAGATGTCTGTGCTGAGAACTGAAAGCCACGGCCCAACGAGAAGAGCCTGGTaGCGTCCAGCAGAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GWTRKTQMSVLRTESHGPTRRAW*RPAENS Trigger: ACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGT...TGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCGGGGGCACAATGAGCTaGCTCCTCTCTCCTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GQDSTNKGHVWESEGPRSGGTMS*LLSPTH Trigger: GTGTGTAGGAGAGAGGAGGCAGCTCATTGTGCCCCC...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | AGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGGGTCCATCCCAGGGATaGTGTAACCCTGCCCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: STNKGHVWESEGPRSSPLGPSQG*CNPARH Trigger: ATGTCGGGCAGGGTTACATCATCCCTGGGATGGACC...CAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | AATCTCAGTGCCTCCTCCCTGAACTGGATCTGTCACAAGAACCTTAAGGAAGAGCGATGGCCACCAGGGTaGTACGGTCATAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLSASSLNWICHKNLKEERWPPG*YGHSWS Trigger: ACTCCAGCTATGACCGTAGCACCCTGGTGGCCATCG...CTCTTCCTTAAGGTTCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | AATCTCAGTGCCTCCTCCCTGAACTGGATCTGTCACAAGAACCTTAAGGAAGAGGTTTTGTCTGGGTCTTaGCCAGGCATGAGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSASSLNWICHKNLKEEVLSGS*PGMRRP Trigger: AGGACGCCTCATGCCTGGGCAAGACCCAGACAAAAC...CTCTTCCTTAAGGTTCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CCA 90 bp | AGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGTCATGGACCCGCTCCTaGTCCTCATCTGACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STNKGHVWESEGPRSSPLSWTRS*SSSDFS Trigger: GCTGAAGTCAGATGAGGACCAGGAGCGGGTCCATGA...CAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| 3UTR CAA 72 bp | CCTCAGATTAGCACCAAGTGCAGGTTCTCGAAACCCTaGGGCCTGAGCAGGCTTTCCTCTTACACAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PQISTKCRFSKP*GLSRLSSYTTF Trigger: AAAGGTTGTGTAAGAGGAAAGCCTGCTCAGGCCCAAGGGTTTCGAGAACCTGCACTTGGTGCTAATCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | AGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGTGTGGTATCTCTCGATaGCCACATCTTCCAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STNKGHVWESEGPRSSPLCGISR*PHLPRG Trigger: CCCCCTTGGAAGATGTGGTCATCGAGAGATACCACA...CAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | AGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGTGTTGTCAAAGGCAGTaGCATCCAGCAGAGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: STNKGHVWESEGPRSSPLCCQRQ*HPAECH Trigger: ATGGCACTCTGCTGGATGGCACTGCCTTTGACAACA...CAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | CTTTTATTGACACAAAGGAGAAAGGACTGGATCAGTTTAGCCTTTGAGTCCAAGCCTGGTCCATGCCTTTaGTCAGCCAACCAGAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTQRRKDWISLAFESKPGPCL*SANQSR Trigger: TCGGCTCTGGTTGGCTGATCAAAGGCATGGACCAGG...CTTGGACTCAAAGGCTAAACTGATCCAGTCCTTTCTCCTTTGTGTCAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR GCA 90 bp | AATCTCAGTGCCTCCTCCCTGAACTGGATCTGTCACAAGAACCTTAAGGAAGAGAGGAGGATAGTTGACTaGACCGTGTCTGCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLSASSLNWICHKNLKEERRIVD*TVSALF Trigger: GAACAAAGCAGACACGGTGCAGTCAACTATCCTCCT...CTCTTCCTTAAGGTTCTTGTGACAGATCCAGTTCAGGGAGGAGGCACTGAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCTGAAACATGTCACTaGTGGTTTTGTCTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDSTNKGHVWESEGPRSSETCH*WFCLGL Trigger: AAGACCCAGACAAAACCATCAGTGACATGTTTCAGA...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CCA 90 bp | AGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGTGCTACGGTCATAGCTaGAGTCAAACTTTTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STNKGHVWESEGPRSSPLCYGHS*SQTFSR Trigger: ACGGGAAAAAGTTTGACTCCAGCTATGACCGTAGCA...CAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR TCA 90 bp | CTTTTATTGACACAAAGGAGAAAGGACTGGATCAGTTTAGCCTTTGAGTCCAAGCCTCTCCATCTTTATTaGGATCCATGTCTTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLTQRRKDWISLAFESKPLHLY*DPCLQK Trigger: TTTTTGAAGACATGGATCTCAATAAAGATGGAGAGG...CTTGGACTCAAAGGCTAAACTGATCCAGTCCTTTCTCCTTTGTGTCAATAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS TCA 90 bp | TCTGCACTTCTCGGGGACAGGCCCGAGGGATGTGGTATCTCTCGATaGCCACATCTTCCAAGGGGGCTCCGGCCGGGCTGGCACGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SALLGDRPEGCGISR*PHLPRGLRPGWHGP Trigger: TGGGCCGTGCCAGCCCGGCCGGAGCCCCCTTGGAAGATGTGGTCATCGAGAGATACCACATCCCTCGGGCCTGTCCCCGAGAAGTGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 ENSMUST00000134815.2 |
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| CDS-3UTR CAA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACCCCTATGCATGCGCCTaGCAGCCCCTGGTCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGTGGDREMGQDSTNKGHPYACA*QPLVHP Trigger: GGGATGGACCAGGGGCTGCAAGGCGCATGCATAGGG...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CAA 90 bp | GAGGAGAAGAGTGAGAATGGTGGGCAGCTGGAGCCACCCCTTCCTGAGGAGCAGACCGTGTCCTTCGGGTaGTGGACATCCAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEKSENGGQLEPPLPEEQTVSFG*WTSSSR Trigger: CCTGCTGCTGGATGTCCACAACCCGAAGGACACGGT...CTGCTCCTCAGGAAGGGGTGGCTCCAGCTGCCCACCATTCTCACTCTTCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CAA 90 bp | GGATGGGTGTGTGGGGTTCGCGATGGCCCTAACCAAATCTCAGTGCCTCCTCCCGGTTTTGTCTGGGTCTaGCCCAGGCATGAGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GWVCGVRDGPNQISVPPPGFVWV*PRHEAS Trigger: GGACGCCTCATGCCTGGGCAAGACCCAGACAAAACC...GGGAGGAGGCACTGAGATTTGGTTAGGGCCATCGCGAACCCCACACACCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS TCA 90 bp | GCAGGCCCCTGTCCAGACCTTCGATCACTTTGTTGGCTCCGAGGGTaGTCTCTTGAGGGGCCTCATAGTCGTGGGACGAGAAGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPCPDLRSLCWLRG*SLEGPHSRGTRRAW Trigger: CCAGGCTCTTCTCGTCCCACGACTATGAGGCCCCTCAAGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGGTCTGGACAGGGGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS-3UTR CAA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACCCCTGGTCCATGCCTTaGATCAGCCAACCAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGTGGDREMGQDSTNKGHPWSMP*ISQPEP Trigger: CGGCTCTGGTTGGCTGATCAAAGGCATGGACCAGGG...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CAA 90 bp | CACGTCTGGGAAAGTGAAGGACCAAGAAGCTCACCCTTGCCGTGCCTAGTGACGGCCGAGCCAGGGATCTaGTCTCCTGTCCCATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HVWESEGPRSSPLPCLVTAEPGI*SPVPFS Trigger: GGAGAATGGGACAGGAGACAAGATCCCTGGCTCGGC...CGTCACTAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS-3UTR CAA 90 bp | GGATGGGTGTGTGGGGTTCGCGATGGCCCTAACCAAATCTCAGTGCCTCCTCCCAGACCTTCGATCACTTaGTTGGCTCCGAGGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GWVCGVRDGPNQISVPPPRPSIT*LAPRVI Trigger: GATCACCCTCGGAGCCAACAAAGTGATCGAAGGTCT...GGGAGGAGGCACTGAGATTTGGTTAGGGCCATCGCGAACCCCACACACCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CAA 90 bp | GGTTGGACGAGAAAAACACAGATGTCTGTGCTGAGAACTGAAAGCCACGGCCCAAGGCGGCGGCGCTCGTaGACACACATGCCCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWTRKTQMSVLRTESHGPRRRRS*THMPMR Trigger: TCTCATGGGCATGTGTGTCAACGAGCGCCGCCGCCT...TGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CAA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACTCATCTGACTTCAGCTaGAGCTCCTCAGCTGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGTGGDREMGQDSTNKGHSSDFS*SSSAVI Trigger: GATCACAGCTGAGGAGCTCAAGCTGAAGTCAGATGA...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS TCA 90 bp | TCTGGGTCTTGCCCAGGCATGAGGCGTCCTTTGCCTTCATTCACTTaGGCCTTGATGAAGGAAGAGAACTCTTCTGGGGGCACCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSCPGMRRPLPSFT*ALMKEENSSGGTSP Trigger: TGGAGAGGTGCCCCCAGAAGAGTTCTCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAAAGGACGCCTCATGCCTGGGCAAGACCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
||
| CDS CCA 90 bp | GGCCTACGCCCACAACGATGGCCACCAGGGTGCTACGGTCATAGCTaGAGTCAAACTTTTTCCCGTCTTCGAAAGTGCCATTGTAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLRPQRWPPGCYGHS*SQTFSRLRKCHCSG Trigger: ACCACTACAATGGCACTTTCGAAGACGGGAAAAAGTTTGACTCCAGCTATGACCGTAGCACCCTGGTGGCCATCGTTGTGGGCGTAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
||
| CDS CCA 90 bp | CTGGTTCCGGTCCTGGTTCTGAAACATGTCACTGATGGTTTTGTCTaGGTCTTGCCCAGGCATGAGGCGTCCTTTGCCTTCATTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPVLVLKHVTDGFV*VLPRHEASFAFIHL Trigger: CAAGTGAATGAAGGCAAAGGACGCCTCATGCCTGGGCAAGACCCAGACAAAACCATCAGTGACATGTTTCAGAACCAGGACCGGAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
||
| CDS-3UTR CAA 90 bp | ACGGGGACAGGCGGGGACAGGGAGATGGGACAGGACAGTACAAATAAAGGGCACTTTGCCTTCATTCACTaGAGCCTTGATGAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGTGGDREMGQDSTNKGHFAFIH*SLDEGR Trigger: TCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAAA...GTGCCCTTTATTTGTACTGTCCTGTCCCATCTCCCTGTCCCCGCCTGTCCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CAA 90 bp | GGTTGGACGAGAAAAACACAGATGTCTGTGCTGAGAACTGAAAGCCACGGCCCAATGTCACTGATGGTTTaGTCTGGGTCTTGCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GWTRKTQMSVLRTESHGPMSLMV*SGSCPG Trigger: GCCTGGGCAAGACCCAGACAAAACCATCAGTGACAT...TGGGCCGTGGCTTTCAGTTCTCAGCACAGACATCTGTGTTTTTCTCGTCCAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
||
| CDS-3UTR CAA 90 bp | GGACAGGACAGTACAAATAAAGGGCACGTCTGGGAAAGTGAAGGACCAAGAAGCCCTTCGATCACTTTGTaGGCTCCGAGGGTGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GQDSTNKGHVWESEGPRSPSITL*APRVIS Trigger: AGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGG...GCTTCTTGGTCCTTCACTTTCCCAGACGTGCCCTTTATTTGTACTGTCCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001595.10 |
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| CDS TCA 72 bp | CTCGGGGACAGGCCCGAGGGATGTGGTATCTCTCGATaGCCACATCTTCCAAGGGGGCTCCGGCCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGDRPEGCGISR*PHLPRGLRPGW Trigger: CCAGCCCGGCCGGAGCCCCCTTGGAAGATGTGGTCATCGAGAGATACCACATCCCTCGGGCCTGTCCCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 ENSMUST00000134815.2 |
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| CDS GCA 72 bp | TCTCCAAGGTCTGTAGAAGCAACAGCAACGGCAGTATaGGGAGCCGATGGAGGGTGTGGCTGGAGGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPRSVEATATAV*GADGGCGWRTP Trigger: TGGGGTCCTCCAGCCACACCCTCCATCGGCTCCGCATACTGCCGTTGCTGTTGCTTCTACAGACCTTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CCA 72 bp | CCCATCTGCACTTCTCGGGGACAGGCCCGAGGGATGTaGTATCTCTCGATGACCACATCTTCCAAGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PICTSRGQARGM*YLSMTTSSKGA Trigger: AGCCCCCTTGGAAGATGTGGTCATCGAGAGATACCACATCCCTCGGGCCTGTCCCCGAGAAGTGCAGATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 ENSMUST00000134815.2 |
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| CDS CAA 90 bp | CCTGTCCAGACCTTCGATCACTTTGTTGGCTCCGAGGGTGATCTCTaGAGGGGCCTCATAGTCGTGGGACGAGAAGAGCCTGGTGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: PVQTFDHFVGSEGDL*RGLIVVGREEPGAV Trigger: GACGGCACCAGGCTCTTCTCGTCCCACGACTATGAGGCCCCTCAAGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGGTCTGGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS GCA 72 bp | GAGGGGCCTCATAGTCGTGGGACGAGAAGAGCCTGGTaGCGTCCAGCAGAGAACAGTTGTAGTGGTAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: EGPHSRGTRRAW*RPAENSCSGSE Trigger: TTCGCTACCACTACAACTGTTCTCTGCTGGACGGCACCAGGCTCTTCTCGTCCCACGACTATGAGGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CCA 72 bp | TGGAAGGATCCTGGTACCACACAAACAGGTAGCCTGTaGGCAGGCCATCCTCTCGGGATACCAGCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: WKDPGTTQTGSL*AGHPLGIPAPP Trigger: AGGTGGAGCTGGTATCCCGAGAGGATGGCCTGCCCACAGGCTACCTGTTTGTGTGGTACCAGGATCCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CAA 72 bp | GTCTCATTGCAGTTCTCAGGAGGCCGGGACAGCGTCTaGATTTCCACAGGGTCCGAAGGGTTGTGGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: VSLQFSGGRDSV*ISTGSEGLWKS Trigger: CGACTTCCACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCAATGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CAA 90 bp | GTCTGGGTCTTGCCCAGGCATGAGGCGTCCTTTGCCTTCATTCACTaGAGCCTTGATGAAGGAAGAGAACTCTTCTGGGGGCACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VWVLPRHEASFAFIH*SLDEGRELFWGHLS Trigger: GGAGAGGTGCCCCCAGAAGAGTTCTCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAAAGGACGCCTCATGCCTGGGCAAGACCCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS TCA 72 bp | TCTCATTGCAGTTCTCAGGAGGCCGGGACAGCGTCTTaGTTTCCACAGGGTCCGAAGGGTTGTGGAAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SHCSSQEAGTAS*FPQGPKGCGSR Trigger: TCGACTTCCACAACCCTTCGGACCCTGTGGAAATCAAGACGCTGTCCCGGCCTCCTGAGAACTGCAATGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS TCA 72 bp | TGTCCAGACCTTCGATCACTTTGTTGGCTCCGAGGGTaGTCTCTTGAGGGGCCTCATAGTCGTGGGACGAGA | + |
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Preference number: 6 (lower is better) Translates to: CPDLRSLCWLRG*SLEGPHSRGTR Trigger: TCTCGTCCCACGACTATGAGGCCCCTCAAGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGGTCTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CAA 72 bp | ACCTTCGATCACTTTGTTGGCTCCGAGGGTGATCTCTaGAGGGGCCTCATAGTCGTGGGACGAGAAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: TFDHFVGSEGDL*RGLIVVGREEP Trigger: AGGCTCTTCTCGTCCCACGACTATGAGGCCCCTCAAGAGATCACCCTCGGAGCCAACAAAGTGATCGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CCA 72 bp | CCACAACGATGGCCACCAGGGTGCTACGGTCATAGCTaGAGTCAAACTTTTTCCCGTCTTCGAAAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PQRWPPGCYGHS*SQTFSRLRKCH Trigger: ATGGCACTTTCGAAGACGGGAAAAAGTTTGACTCCAGCTATGACCGTAGCACCCTGGTGGCCATCGTTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CCA 72 bp | GTCCTGGTTCTGAAACATGTCACTGATGGTTTTGTCTaGGTCTTGCCCAGGCATGAGGCGTCCTTTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLVLKHVTDGFV*VLPRHEASFAF Trigger: GAAGGCAAAGGACGCCTCATGCCTGGGCAAGACCCAGACAAAACCATCAGTGACATGTTTCAGAACCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CAA 72 bp | TTGCCCAGGCATGAGGCGTCCTTTGCCTTCATTCACTaGAGCCTTGATGAAGGAAGAGAACTCTTCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LPRHEASFAFIH*SLDEGRELFWG Trigger: CCCCCAGAAGAGTTCTCTTCCTTCATCAAGGCTCAAGTGAATGAAGGCAAAGGACGCCTCATGCCTGGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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| CDS CAA 72 bp | GTTCTGAAACATGTCACTGATGGTTTTGTCTGGGTCTaGCCCAGGCATGAGGCGTCCTTTGCCTTCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: VLKHVTDGFVWV*PRHEASFAFIH Trigger: GTGAATGAAGGCAAAGGACGCCTCATGCCTGGGCAAGACCCAGACAAAACCATCAGTGACATGTTTCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001595.10 ENSMUST00000107400.3 |
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