Pregenerated sensors for FJX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075012Ensembl transcript IDs: ENSMUST00000099678.5
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCTGTCCCTTGGCGATCAGACCATTaGGTGGGCGTTGGCTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSQGRGSLALFVLSRAVPWRSDH*VGVGWL Trigger: CAACCAGCCAACGCCCACCCAATGGTCTGATCGCCA...AGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CAA 90 bp | GTCAGGGTCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTaGTCCTATCCAGAGCTGTCCCTCAGCTTGGAACAGTTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VRVWRAPRGGEVLLS*SYPELSLSLEQLSH Trigger: GTGAGATAACTGTTCCAAGCTGAGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGACCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCAAACCCCAGCAGCCAGTTTCTTCGGATCCAATCTCCACACAAGCACAGAACCATTGGGTGGGCGTTaGCTGGTTGGTCGTTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: GQTPAASFFGSNLHTSTEPLGGR*LVGRCP Trigger: CGGGCAACGACCAACCAGCCAACGCCCACCCAATGG...TTCTGTGCTTGTGTGGAGATTGGATCCGAAGAAACTGGCTGCTGGGGTTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCAAACCCCAGCAGCCAGTTTCTTCGGATCCAATCTCCACACAAGCACAGAACACTTCTCGCCTCGGTaGGTTTGCCCTTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GQTPAASFFGSNLHTSTEHFSPR*VCPSRT Trigger: AGTTCTGGAAGGGCAAACTCACCGAGGCGAGAAGTG...TTCTGTGCTTGTGTGGAGATTGGATCCGAAGAAACTGGCTGCTGGGGTTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CAA 90 bp | GGGAATGTTACACTTCTCGCCTCGGTGAGTTTGCCCTTCCAGAACTaGGAAAGGAAACAGCCTGGCATGAAAAGAAAGGGGCAAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GNVTLLASVSLPFQN*ERKQPGMKRKGQVG Trigger: ACCCACTTGCCCCTTTCTTTTCATGCCAGGCTGTTTCCTTTCCAAGTTCTGGAAGGGCAAACTCACCGAGGCGAGAAGTGTAACATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR TCA 90 bp | GGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTGGAAACAGCCTGGCATaGAAAGAAAGGGGCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GPPALCLVGNRGISSNGSGNSLA*KERGKW Trigger: CCACTTGCCCCTTTCTTTTCATGCCAGGCTGTTTCC...ACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTGCCCTTCCAGAACTTaGAAAGGAAACAGCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GPPALCLVGNRGISSNGSCPSRT*KGNSLA Trigger: TGCCAGGCTGTTTCCTTTCCAAGTTCTGGAAGGGCA...ACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CAA 90 bp | TATAAGCTAGGTGGAGGGAATGTTACACTTCTCGCCTCGGTGAGTTaGCCCTTCCAGAACTTGGAAAGGAAACAGCCTGGCATGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: YKLGGGNVTLLASVS*PFQNLERKQPGMKR Trigger: TCTTTTCATGCCAGGCTGTTTCCTTTCCAAGTTCTGGAAGGGCAAACTCACCGAGGCGAGAAGTGTAACATTCCCTCCACCTAGCTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCGGGTTTCACCAGCCCTaGTCACAGCCTGCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSGFHQP*SQPALG Trigger: CCCCAGAGCAGGCTGTGACAAGGGCTGGTGAAACCC...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCAGCTTGGAACAGTTATCTCACCATCGCGCGCCGGAACAAAGGGCGAACGTGGGCGTTGGCTGGTaGGTCGTTGCCCGTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: SLSLEQLSHHRAPEQRANVGVGW*VVARGR Trigger: TCTGCCACGGGCAACGACCAACCAGCCAACGCCCAC...GTTCGCCCTTTGTTCCGGCGCGCGATGGTGAGATAACTGTTCCAAGCTGAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CCA 72 bp | ACAGCTTGGCGATCAGACCATTGGGTGGGCGTTGGCTaGTTGGTCGTTGCCCGTGGCAGAGAAGACAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TAWRSDHWVGVG*LVVARGREDSP Trigger: AGGGCTGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCTGTCCCTTTGCCCTTCCAGAACTaGGAAAGGAAACAGCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GSQGRGSLALFVLSRAVPLPFQN*ERKQPG Trigger: GCCAGGCTGTTTCCTTTCCAAGTTCTGGAAGGGCAA...AGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR GCA 72 bp | CACAGGAAGGGGGTTTCACCAGCCCTTGTCACAGCCTaGTCTGGGGCCACCAGCGCTGTGTTTAGTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: HRKGVSPALVTA*SGATSAVFSRK Trigger: TTTCCTACTAAACACAGCGCTGGTGGCCCCAGAGCAGGCTGTGACAAGGGCTGGTGAAACCCCCTTCCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CCA 72 bp | TTAGACAGCTTGGCGATCAGACCATTGGGTGGGCGTTaGCTGGTTGGTCGTTGCCCGTGGCAGAGAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LDSLAIRPLGGR*LVGRCPWQRRQ Trigger: CTGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAAGCTGTCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CAA 90 bp | GGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTCTCGCCTCGGTGAGTTaGCCCTTCCAGAACTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GPPALCLVGNRGISSNGSLASVS*PFQNLE Trigger: TTCCAAGTTCTGGAAGGGCAAACTCACCGAGGCGAG...ACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR TCA 72 bp | TGCCCTTCCAGAACTTGGAAAGGAAACAGCCTGGCATaGAAAGAAAGGGGCAAGTGGGTAACACACAATTTT | + |
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Preference number: 3 (lower is better) Translates to: CPSRTWKGNSLA*KERGKWVTHNF Trigger: AAAATTGTGTGTTACCCACTTGCCCCTTTCTTTTCATGCCAGGCTGTTTCCTTTCCAAGTTCTGGAAGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGGTCAATTGGGAGACGCAGGAAGAAATTCATTATTGACTCTGCTTATAACTAGGGGCGGGGAAGTCTaGCTCTCTTTGTCCTATCCA | + |
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Preference number: 3 (lower is better) Translates to: FGQLGDAGRNSLLTLLITRGGEV*LSLSYP Trigger: TGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCT...AGTTATAAGCAGAGTCAATAATGAATTTCTTCCTGCGTCTCCCAATTGACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR TCA 90 bp | CAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGAGAAGACACAGACGGCCGTCCTCTaGTCGCCAGGGCTCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QTIGWALAGWSLPVAEKTQTAVL*SPGLGH Trigger: GTGCCCGAGCCCTGGCGATCAGAGGACGGCCGTCTG...TGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCCCAGCTCCGCCTGGCTaGGGTTGGTCAGCTCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSPAPPG*GWSARP Trigger: GGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGG...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCTGTCCCTTGCACCTGCACCCACTaGGCGCCCCGAGCCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: GSQGRGSLALFVLSRAVPCTCTH*APRAST Trigger: GGTGGAGGCTCGGGGCGCGCAGTGGGTGCAGGTGCA...AGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | TTGGCGATCAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGTCAGGCTCACCACGCTaGCCTCGGTCCAGTGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LAIRPLGGRWLVGRCPWQSGSPR*PRSSAR Trigger: CCGCGCACTGGACCGAGGGCAGCGTGGTGAGCCTGA...CTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | GGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCTGTCCCTCAGCTCGGTCCGCGGTaGCAGGAGTCCTCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GSQGRGSLALFVLSRAVPQLGPR*QESSPQ Trigger: CTGTGGGGAGGACTCCTGCCACCGCGGACCGAGCTG...AGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR TCA 90 bp | CAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGAGAAGACACGGCGCTGTAGCAGCTaGGCGTGGGGTTCTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTIGWALAGWSLPVAEKTRRCSS*AWGSES Trigger: GCTCTCAGAACCCCACGCTCAGCTGCTACAGCGCCG...TGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | TCCCTCAGCTTGGAACAGTTATCTCACCATCGCGCGCCGGAACAAAGGGCGAACCTGCCCTCGGTCCAGTaGGCGGTGCGCAGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLSLEQLSHHRAPEQRANLPSVQ*AVRSSS Trigger: GGAGGAGCTGCGCACCGCGCACTGGACCGAGGGCAG...GTTCGCCCTTTGTTCCGGCGCGCGATGGTGAGATAACTGTTCCAAGCTGAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR TCA 90 bp | GCTCTGGGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACCGGGCCGCCGCGTCCTaGCCCCGGTGCAGCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ALGPPALCLVGNRGISSNRAAAS*PRCSSK Trigger: CTTGGAGCTGCACCGGGGTCAGGACGCGGCGGCCCG...GTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | TTGGCGATCAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGGCCGGCGGCCGTACTTaGCCTTGCAGTGCAAAATGT | + |
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Preference number: 4 (lower is better) Translates to: LAIRPLGGRWLVGRCPWQAGGRT*PCSAKC Trigger: ACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGC...CTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GGCCAAACCCCAGCAGCCAGTTTCTTCGGATCCAATCTCCACACAAGCACAGAACAGAAGACGCCCCCGTaGACCGCCCTGCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GQTPAASFFGSNLHTSTEQKTPP*TALRSS Trigger: AGAGGAGCGCAGGGCGGTGCACGGGGGCGTCTTCTG...TTCTGTGCTTGTGTGGAGATTGGATCCGAAGAAACTGGCTGCTGGGGTTTGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCCACCTCCAGCCACGCTaGTGCTTGGGCTTCGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSHLQPR*CLGFGK Trigger: TTTTCCGAAGCCCAAGCAGCAGCGTGGCTGGAGGTG...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | GGGTGGAGGGGGCGACAAAAATGGACTGCATCTCCCAAAGAGACTGCCATTCCCAGCCACGCTGCTGCTTaGGCTTCGGAAAAGCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: GWRGRQKWTASPKETAIPSHAAA*ASEKPR Trigger: CCGGGGCTTTTCCGAAGCCCAAGCAGCAGCGTGGCT...GGGAATGGCAGTCTCTTTGGGAGATGCAGTCCATTTTTGTCGCCCCCTCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CAA 72 bp | TGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTaGTCCTATCCAGAGCTGTCCCTCAGCTTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: WRAPRGGEVLLS*SYPELSLSLEQ Trigger: CTGTTCCAAGCTGAGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTCTCCACCCGAGCCAGTaGCAGCGGCGGCACGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: GPPALCLVGNRGISSNGSLHPSQ*QRRHVA Trigger: CGCCACGTGCCGCCGCTGGCACTGGCTCGGGTGGAG...ACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | CAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGAGAAGACAGCCCTGTATCTGCTCTaGGTTGATGCCGTAGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: QTIGWALAGWSLPVAEKTALYLL*VDAVAY Trigger: GTACGCTACGGCATCAACCCAGAGCAGATACAGGGC...TGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | GGCCAAACCCCAGCAGCCAGTTTCTTCGGATCCAATCTCCACACAAGCACAGAAGACCAACGCCCCTCCTaGTCCTCGGTGCAGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GQTPAASFFGSNLHTSTEDQRPS*SSVQVA Trigger: AGCAACCTGCACCGAGGACCAGGAGGGGCGTTGGTC...TTCTGTGCTTGTGTGGAGATTGGATCCGAAGAAACTGGCTGCTGGGGTTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTAGCTCCTCCTGCACCTaGACCCACTGCGCGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GPPALCLVGNRGISSNGSSSSCT*THCAPR Trigger: TCGGGGCGCGCAGTGGGTGCAGGTGCAGGAGGAGCT...ACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCGGCCGTACTTGGCCTTaGAGTGCAAAATGTGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSGRTWP*SAKCVW Trigger: CCAAACACATTTTGCACTGCAAGGCCAAGTACGGCC...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCAGTGCAAAATGTGTTTaGCGAGGAAGTCAAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSSAKCV*RGSQGG Trigger: GCCGCCTTGACTTCCTCGCCAAACACATTTTGCACT...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR TCA 90 bp | GCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTTTCCTTTTCGCCGGCCGCCAGGGTaGGCAGCGCCCGGAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ALCLVGNRGISSNGSFPFRRPPG*AAPGKF Trigger: AAACTTTCCGGGCGCTGCTCACCCTGGCGGCCGGCG...AAAAGGAAAACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | TTTGGTCAATTGGGAGACGCAGGAAGAAATTCATTATTGACTCTGCTTATAACTAAGCCCCGGGGAACCTaGTCCTCCAGGCCGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FGQLGDAGRNSLLTLLITKPRGT*SSRPRL Trigger: GAGCCGCGGCCTGGAGGAGCAGGTTCCCCGGGGCTT...AGTTATAAGCAGAGTCAATAATGAATTTCTTCCTGCGTCTCCCAATTGACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GCTCTGGGGCCACCAGCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACTACTTGGCCTTGCAGTaGAAAATGTGTTTGGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: ALGPPALCLVGNRGISSNYLALQ*KMCLAR Trigger: CCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTA...GTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGCTGGTGGCCCCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTCAATTGGGAGACGCAGGAAGAAATTCATTATTGACTCTGCTTATAACTTCCACCAGCTCCGCCTaGCTGAGGTTGGTCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: FGQLGDAGRNSLLTLLITSTSSA*LRLVSS Trigger: CGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGA...AGTTATAAGCAGAGTCAATAATGAATTTCTTCCTGCGTCTCCCAATTGACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR GCA 90 bp | GCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTTTCCTTTTTATACTTGTCCCACATaGCGGCTACCCGGTAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: ALCLVGNRGISSNGSFPFYTCPT*RLPGSR Trigger: ACGGCTACCGGGTAGCCGGCATGTGGGACAAGTATA...AAAAGGAAAACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CCA 90 bp | GCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTTTCCTTTTCAAGCCGGTCAAAGTTaGCCGTCAGGTAATCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ALCLVGNRGISSNGSFPFQAGQS*PSGNRR Trigger: TCTTCGATTACCTGACGGCCAACTTTGACCGGCTTG...AAAAGGAAAACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| 3UTR CAA 72 bp | CCTCTGGTGAACATCATCATTGTCAATTTTGGTCAATaGGGAGACGCAGGAAGAAATTCATTATTGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLVNIIIVNFGQ*GDAGRNSLLTL Trigger: CAGAGTCAATAATGAATTTCTTCCTGCGTCTCCCAATTGACCAAAATTGACAATGATGATGTTCACCAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | GCTCCTCCAGGCCGCGGCTCCAGAAGACGCCCCCGTGCACCGCCCTaGGCTCCTCTGGCCAGGACAGCCCGGAGGGCTCGTGCCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: APPGRGSRRRPRAPP*APLARTARRARAAR Trigger: GCGGGCGGCACGAGCCCTCCGGGCTGTCCTGGCCAGAGGAGCGCAGGGCGGTGCACGGGGGCGTCTTCTGGAGCCGCGGCCTGGAGGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | GCCGCGGCTCCAGAAGACGCCCCCGTGCACCGCCCTGCGCTCCTCTaGCCAGGACAGCCCGGAGGGCTCGTGCCGCCCGCGGTCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AAAPEDAPVHRPALL*PGQPGGLVPPAVVL Trigger: CAGGACGACCGCGGGCGGCACGAGCCCTCCGGGCTGTCCTGGCCAGAGGAGCGCAGGGCGGTGCACGGGGGCGTCTTCTGGAGCCGCGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | GGCCAGGACAGCCCGGAGGGCTCGTGCCGCCCGCGGTCGTCCTGGTaGCTCCTAGGCGGGTTATCCGCGCCGGCCGCCAGGGTGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GQDSPEGSCRPRSSW*LLGGLSAPAARVSS Trigger: GCTGCTCACCCTGGCGGCCGGCGCGGATAACCCGCCTAGGAGGCACCAGGACGACCGCGGGCGGCACGAGCCCTCCGGGCTGTCCTGGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | TCTGGCCAGGACAGCCCGGAGGGCTCGTGCCGCCCGCGGTCGTCCTaGTGCCTCCTAGGCGGGTTATCCGCGCCGGCCGCCAGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGQDSPEGSCRPRSS*CLLGGLSAPAARVS Trigger: GCTCACCCTGGCGGCCGGCGCGGATAACCCGCCTAGGAGGCACCAGGACGACCGCGGGCGGCACGAGCCCTCCGGGCTGTCCTGGCCAGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 90 bp | CAGCTCGCCCCCGGCGTCGCGCAGGGGCCGCAGACGGCCGTCCTCTaGTCGCCAGGGCTCGGGCACCACCACGTCGGTGAGGTTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLAPGVAQGPQTAVL*SPGLGHHHVGEVRQ Trigger: CTGCCTAACCTCACCGACGTGGTGGTGCCCGAGCCCTGGCGATCAGAGGACGGCCGTCTGCGGCCCCTGCGCGACGCCGGGGGCGAGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | ACGCTGCCCTCGGTCCAGTGCGCGGTGCGCAGCTCCTCCTGCACCTaGACCCACTGCGCGCCCCGAGCCTCCACCCGAGCCAGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLPSVQCAVRSSSCT*THCAPRASTRASAS Trigger: GCTGGCACTGGCTCGGGTGGAGGCTCGGGGCGCGCAGTGGGTGCAGGTGCAGGAGGAGCTGCGCACCGCGCACTGGACCGAGGGCAGCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | CTCACCACGCTGCCCTCGGTCCAGTGCGCGGTGCGCAGCTCCTCCTaGACCTGCACCCACTGCGCGCCCCGAGCCTCCACCCGAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTTLPSVQCAVRSSS*TCTHCAPRASTRAS Trigger: ACTGGCTCGGGTGGAGGCTCGGGGCGCGCAGTGGGTGCAGGTGCAGGAGGAGCTGCGCACCGCGCACTGGACCGAGGGCAGCGTGGTGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | CACAGGCACGGGTGCCGTCGGCAAAGCGGGCTAGGCGGTTGGAACTaGGTCCGCAGCCCCCGCGATCCAGAGCCACCACCCGAGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRHGCRRQSGLGGWN*VRSPRDPEPPPEHP Trigger: GGGGTGCTCGGGTGGTGGCTCTGGATCGCGGGGGCTGCGGACGCAGTTCCAACCGCCTAGCCCGCTTTGCCGACGGCACCCGTGCCTGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | TTAGGCAGCCAGCGCGTCAGGCTCACCACGCTGCCCTCGGTCCAGTaGGCGGTGCGCAGCTCCTCCTGCACCTGCACCCACTGCGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSQRVRLTTLPSVQ*AVRSSSCTCTHCAP Trigger: GGGCGCGCAGTGGGTGCAGGTGCAGGAGGAGCTGCGCACCGCGCACTGGACCGAGGGCAGCGTGGTGAGCCTGACGCGCTGGCTGCCTAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | CTGGATCGGATGCGGAGGGAGTCGATCTTCGGGCGGCCGGGAGGCTaGCAGCTCGGTCCGCGGTGGCAGGAGTCCTCCCCACAGCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDRMRRESIFGRPGG*QLGPRWQESSPQRQ Trigger: CTGACGCTGTGGGGAGGACTCCTGCCACCGCGGACCGAGCTGCCAGCCTCCCGGCCGCCCGAAGATCGACTCCCTCCGCATCCGATCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | GAGTCGATCTTCGGGCGGCCGGGAGGCTGGCAGCTCGGTCCGCGGTaGCAGGAGTCCTCCCCACAGCGTCAGCAGCGAGCTCAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESIFGRPGGWQLGPR*QESSPQRQQRAQSQ Trigger: CTGGCTTTGAGCTCGCTGCTGACGCTGTGGGGAGGACTCCTGCCACCGCGGACCGAGCTGCCAGCCTCCCGGCCGCCCGAAGATCGACTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | AGCGTACACAGGCACGGGTGCCGTCGGCAAAGCGGGCTAGGCGGTTaGAACTGCGTCCGCAGCCCCCGCGATCCAGAGCCACCACCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVHRHGCRRQSGLGG*NCVRSPRDPEPPPE Trigger: CTCGGGTGGTGGCTCTGGATCGCGGGGGCTGCGGACGCAGTTCCAACCGCCTAGCCCGCTTTGCCGACGGCACCCGTGCCTGTGTACGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 90 bp | GGATCAGATCGGTCCATTGTACCAAGTCCACCAGCTCCGCCTGGCTaGGGTTGGTCAGCTCGCCCCCGGCGTCGCGCAGGGGCCGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSDRSIVPSPPAPPG*GWSARPRRRAGAAD Trigger: GTCTGCGGCCCCTGCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCTGATCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | TTGGCGATCAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGTCCGCCTGGCTGAGGTaGGTCAGCTCGCCCCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LAIRPLGGRWLVGRCPWQSAWLR*VSSPPA Trigger: CGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGA...CTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | AAGAGGATCAGATCGGTCCATTGTACCAAGTCCACCAGCTCCGCCTaGCTGAGGTTGGTCAGCTCGCCCCCGGCGTCGCGCAGGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KRIRSVHCTKSTSSA*LRLVSSPPASRRGR Trigger: GCGGCCCCTGCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCTGATCCTCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 90 bp | GCGCAAGGTAGTAGGACAGGGCCTCGCCCTGTATCTGCTCTGGGTTaGTGCCGTAGCGTACACAGGCACGGGTGCCGTCGGCAAAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AQGSRTGPRPVSALG*CRSVHRHGCRRQSG Trigger: CCCGCTTTGCCGACGGCACCCGTGCCTGTGTACGCTACGGCATCAACCCAGAGCAGATACAGGGCGAGGCCCTGTCCTACTACCTTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | CCCGCCTCATTGTCCAGAAAGACCAACGCCCCTCCTGGTCCTCGGTaGAGGTTGCTCGTAGCGCGGTGCATAACGCGTGGGTCCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PASLSRKTNAPPGPR*RLLVARCITRGSHC Trigger: ACAGTGGGACCCACGCGTTATGCACCGCGCTACGAGCAACCTGCACCGAGGACCAGGAGGGGCGTTGGTCTTTCTGGACAATGAGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | CAGGCGCGCAAGGTAGTAGGACAGGGCCTCGCCCTGTATCTGCTCTaGGTTGATGCCGTAGCGTACACAGGCACGGGTGCCGTCGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QARKVVGQGLALYLL*VDAVAYTGTGAVGK Trigger: TTTGCCGACGGCACCCGTGCCTGTGTACGCTACGGCATCAACCCAGAGCAGATACAGGGCGAGGCCCTGTCCTACTACCTTGCGCGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | GTGCACCAAGCCCGCCTCATTGTCCAGAAAGACCAACGCCCCTCCTaGTCCTCGGTGCAGGTTGCTCGTAGCGCGGTGCATAACGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VHQARLIVQKDQRPS*SSVQVARSAVHNAW Trigger: CCACGCGTTATGCACCGCGCTACGAGCAACCTGCACCGAGGACCAGGAGGGGCGTTGGTCTTTCTGGACAATGAGGCGGGCTTGGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | TTGGCGATCAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGGGCCGGCGGCCGTACTaGGCCTTGCAGTGCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LAIRPLGGRWLVGRCPWQGRRPY*ALQCKM Trigger: CATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCC...CTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTGATCGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 90 bp | TGCAAAATGTGTTTGGCGAGGAAGTCAAGGCGGCGCTGTAGCAGCTaGGCGTGGGGTTCTGAGAGCTCCGCCAGCTCTGGGAAACGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: CKMCLARKSRRRCSS*AWGSESSASSGKRG Trigger: ACCGCGTTTCCCAGAGCTGGCGGAGCTCTCAGAACCCCACGCTCAGCTGCTACAGCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | TCTGGAGGGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCACCAAGCCCGCCTCATaGTCCAGAAAGACCAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGLPGAGKSCSLCPIQSTKPAS*SRKTNA Trigger: GGCGTTGGTCTTTCTGGACAATGAGGCGGGCTTGGT...GCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCCCTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | AGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTTGGCCTTGCAGTaGAAAATGTGTTTGGCGAGGAAGTCAAGGCGGCGCTGTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVIKSPGRRPYLALQ*KMCLARKSRRRCSS Trigger: GCTGCTACAGCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | CTCGGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTTGGCCTTaGAGTGCAAAATGTGTTTGGCGAGGAAGTCAAGGCGGCGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGVLLSPRAGGRTWP*SAKCVWRGSQGGAV Trigger: TACAGCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 90 bp | CTCTTCCTCGGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTTaGCCTTGCAGTGCAAAATGTGTTTGGCGAGGAAGTCAAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFLGVLLSPRAGGRT*PCSAKCVWRGSQGG Trigger: GCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCCGAGGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | CAGACCATTGGGTGGGCGTTGGCTGGTTGGTCGTTGCCCGTGGCAGAGAAGACAAGCGGTTCGTTATACTaGTCCCACATGCCGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: QTIGWALAGWSLPVAEKTSGSLY*SHMPAT Trigger: GGTAGCCGGCATGTGGGACAAGTATAACGAACCGCT...TGTCTTCTCTGCCACGGGCAACGACCAACCAGCCAACGCCCACCCAATGGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 90 bp | ATACACACACCGACTGTAGCAGCGGTTCGTTATACTTGTCCCACATaGCGGCTACCCGGTAGCCGTGCACCAAGCCCGCCTCATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHTPTVAAVRYTCPT*RLPGSRAPSPPHCP Trigger: TGGACAATGAGGCGGGCTTGGTGCACGGCTACCGGGTAGCCGGCATGTGGGACAAGTATAACGAACCGCTGCTACAGTCGGTGTGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | GGCTCCCAGGGGCGGGGAAGTCTTGCTCTCTTTGTCCTATCCAGAGCTGTCCCTTGTAAGCTGAAGAGGTaGCTCACAAGCCGGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQGRGSLALFVLSRAVPCKLKR*LTSRSK Trigger: CTTTGACCGGCTTGTGAGCAACCTCTTCAGCTTACA...AGGGACAGCTCTGGATAGGACAAAGAGAGCAAGACTTCCCCGCCCCTGGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | TCCCTCAGCTTGGAACAGTTATCTCACCATCGCGCGCCGGAACAAAGGGCGAACCGGCCGTACTTGGCCTaGCAGTGCAAAATGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLEQLSHHRAPEQRANRPYLA*QCKMCL Trigger: CAAACACATTTTGCACTGCAAGGCCAAGTACGGCCG...GTTCGCCCTTTGTTCCGGCGCGCGATGGTGAGATAACTGTTCCAAGCTGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | GCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTTTCCTTTTGATCAGATCGGTCCATaGTACCAAGTCCACCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALCLVGNRGISSNGSFPFDQIGP*YQVHQL Trigger: GAGCTGGTGGACTTGGTACAATGGACCGATCTGATC...AAAAGGAAAACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS-3UTR CAA 90 bp | GCGCTGTGTTTAGTAGGAAATAGAGGAATTAGCTCAAACGGAAGTTTTCCTTTTCAGTGCAAAATGTGTTaGGCGAGGAAGTCAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALCLVGNRGISSNGSFPFQCKMC*ARKSRR Trigger: CCGCCTTGACTTCCTCGCCAAACACATTTTGCACTG...AAAAGGAAAACTTCCGTTTGAGCTAATTCCTCTATTTCCTACTAAACACAGCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | CCAGAAGACGCCCCCGTGCACCGCCCTGCGCTCCTCTaGCCAGGACAGCCCGGAGGGCTCGTGCCGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PEDAPVHRPALL*PGQPGGLVPPA Trigger: CGCGGGCGGCACGAGCCCTCCGGGCTGTCCTGGCCAGAGGAGCGCAGGGCGGTGCACGGGGGCGTCTTCTGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 72 bp | CCCGGCGTCGCGCAGGGGCCGCAGACGGCCGTCCTCTaGTCGCCAGGGCTCGGGCACCACCACGTCGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGVAQGPQTAVL*SPGLGHHHVGE Trigger: CTCACCGACGTGGTGGTGCCCGAGCCCTGGCGATCAGAGGACGGCCGTCTGCGGCCCCTGCGCGACGCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | TGCTCCTCCAGGCCGCGGCTCCAGAAGACGCCCCCGTaGACCGCCCTGCGCTCCTCTGGCCAGGACAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CSSRPRLQKTPP*TALRSSGQDSP Trigger: CGGGCTGTCCTGGCCAGAGGAGCGCAGGGCGGTGCACGGGGGCGTCTTCTGGAGCCGCGGCCTGGAGGAGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | TCGGTCCAGTGCGCGGTGCGCAGCTCCTCCTGCACCTaGACCCACTGCGCGCCCCGAGCCTCCACCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQCAVRSSSCT*THCAPRASTRA Trigger: GGCTCGGGTGGAGGCTCGGGGCGCGCAGTGGGTGCAGGTGCAGGAGGAGCTGCGCACCGCGCACTGGACCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | TTCGGGCGGCCGGGAGGCTGGCAGCTCGGTCCGCGGTaGCAGGAGTCCTCCCCACAGCGTCAGCAGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGRPGGWQLGPR*QESSPQRQQRA Trigger: AGCTCGCTGCTGACGCTGTGGGGAGGACTCCTGCCACCGCGGACCGAGCTGCCAGCCTCCCGGCCGCCCGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | GGGTGCCGTCGGCAAAGCGGGCTAGGCGGTTGGAACTaGGTCCGCAGCCCCCGCGATCCAGAGCCACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GCRRQSGLGGWN*VRSPRDPEPPP Trigger: GGGTGGTGGCTCTGGATCGCGGGGGCTGCGGACGCAGTTCCAACCGCCTAGCCCGCTTTGCCGACGGCACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | CAGCGCGTCAGGCTCACCACGCTGCCCTCGGTCCAGTaGGCGGTGCGCAGCTCCTCCTGCACCTGCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRVRLTTLPSVQ*AVRSSSCTCTH Trigger: GTGGGTGCAGGTGCAGGAGGAGCTGCGCACCGCGCACTGGACCGAGGGCAGCGTGGTGAGCCTGACGCGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | ATGCGGAGGGAGTCGATCTTCGGGCGGCCGGGAGGCTaGCAGCTCGGTCCGCGGTGGCAGGAGTCCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MRRESIFGRPGG*QLGPRWQESSP Trigger: TGGGGAGGACTCCTGCCACCGCGGACCGAGCTGCCAGCCTCCCGGCCGCCCGAAGATCGACTCCCTCCGCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | AGAGGGAATCGCGGCTCGGGCGCGGGGCCGCCACTCTaGATCGGATGCGGAGGGAGTCGATCTTCGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGNRGSGAGPPL*IGCGGSRSSGG Trigger: GCCGCCCGAAGATCGACTCCCTCCGCATCCGATCCAGAGTGGCGGCCCCGCGCCCGAGCCGCGATTCCCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | AGGCACGGGTGCCGTCGGCAAAGCGGGCTAGGCGGTTaGAACTGCGTCCGCAGCCCCCGCGATCCAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RHGCRRQSGLGG*NCVRSPRDPEP Trigger: TGGCTCTGGATCGCGGGGGCTGCGGACGCAGTTCCAACCGCCTAGCCCGCTTTGCCGACGGCACCCGTGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 72 bp | CATTGTACCAAGTCCACCAGCTCCGCCTGGCTGAGGTaGGTCAGCTCGCCCCCGGCGTCGCGCAGGGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HCTKSTSSAWLR*VSSPPASRRGR Trigger: GCGGCCCCTGCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 90 bp | AGATCGGTCCATTGTACCAAGTCCACCAGCTCCGCCTGGCTGAGGTaGGTCAGCTCGCCCCCGGCGTCGCGCAGGGGCCGCAGACGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSVHCTKSTSSAWLR*VSSPPASRRGRRRP Trigger: CGGCCGTCTGCGGCCCCTGCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 72 bp | CGGTCCATTGTACCAAGTCCACCAGCTCCGCCTGGCTaGGGTTGGTCAGCTCGCCCCCGGCGTCGCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSIVPSPPAPPG*GWSARPRRRAG Trigger: CCCTGCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | AGATCGGTCCATTGTACCAAGTCCACCAGCTCCGCCTaGCTGAGGTTGGTCAGCTCGCCCCCGGCGTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSVHCTKSTSSA*LRLVSSPPASR Trigger: GCGCGACGCCGGGGGCGAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS TCA 72 bp | AGTAGGACAGGGCCTCGCCCTGTATCTGCTCTGGGTTaGTGCCGTAGCGTACACAGGCACGGGTGCCGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTGPRPVSALG*CRSVHRHGCRR Trigger: CCGACGGCACCCGTGCCTGTGTACGCTACGGCATCAACCCAGAGCAGATACAGGGCGAGGCCCTGTCCTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | AAGTCCCCGGGCCGGCGGCCGTACTTGGCCTTGCAGTaGAAAATGTGTTTGGCGAGGAAGTCAAGGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: KSPGRRPYLALQ*KMCLARKSRRR Trigger: GCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 72 bp | AGAAAGACCAACGCCCCTCCTGGTCCTCGGTGCAGGTaGCTCGTAGCGCGGTGCATAACGCGTGGGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RKTNAPPGPRCR*LVARCITRGSH Trigger: GTGGGACCCACGCGTTATGCACCGCGCTACGAGCAACCTGCACCGAGGACCAGGAGGGGCGTTGGTCTTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | CCTCCTGGTCCTCGGTGCAGGTTGCTCGTAGCGCGGTaGATAACGCGTGGGTCCCACTGTAAGCTGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPGPRCRLLVAR*ITRGSHCKLKR Trigger: CCTCTTCAGCTTACAGTGGGACCCACGCGTTATGCACCGCGCTACGAGCAACCTGCACCGAGGACCAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | TTGTCCAGAAAGACCAACGCCCCTCCTGGTCCTCGGTaGAGGTTGCTCGTAGCGCGGTGCATAACGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRKTNAPPGPR*RLLVARCITRG Trigger: CCCACGCGTTATGCACCGCGCTACGAGCAACCTGCACCGAGGACCAGGAGGGGCGTTGGTCTTTCTGGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | CCGACTGTAGCAGCGGTTCGTTATACTTGTCCCACATaGCGGCTACCCGGTAGCCGTGCACCAAGCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PTVAAVRYTCPT*RLPGSRAPSPP Trigger: AGGCGGGCTTGGTGCACGGCTACCGGGTAGCCGGCATGTGGGACAAGTATAACGAACCGCTGCTACAGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | AAGGTAGTAGGACAGGGCCTCGCCCTGTATCTGCTCTaGGTTGATGCCGTAGCGTACACAGGCACGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KVVGQGLALYLL*VDAVAYTGTGA Trigger: GGCACCCGTGCCTGTGTACGCTACGGCATCAACCCAGAGCAGATACAGGGCGAGGCCCTGTCCTACTACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 90 bp | CCTCGGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTTGGCCTaGCAGTGCAAAATGTGTTTGGCGAGGAAGTCAAGGCGGCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PRSVIKSPGRRPYLA*QCKMCLARKSRRRC Trigger: ACAGCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | GGCGGCCGTACTTGGCCTTGCAGTGCAAAATGTGTTTaGCGAGGAAGTCAAGGCGGCGCTGTAGCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GGRTWPCSAKCV*RGSQGGAVAAE Trigger: CTCAGCTGCTACAGCGCCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 90 bp | TCTCTTCCTCGGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTaGGCCTTGCAGTGCAAAATGTGTTTGGCGAGGAAGTCAAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SLPRSVIKSPGRRPY*ALQCKMCLARKSRR Trigger: CCGCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCCGAGGAAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 72 bp | CGGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTaGGCCTTGCAGTGCAAAATGTGTTTGGCGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSVIKSPGRRPY*ALQCKMCLARK Trigger: CTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS GCA 72 bp | TTATTAAGTCCCCGGGCCGGCGGCCGTACTTGGCCTTaGAGTGCAAAATGTGTTTGGCGAGGAAGTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLSPRAGGRTWP*SAKCVWRGSQG Trigger: GCCTTGACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CCA 72 bp | GGAGTGTTATTAAGTCCCCGGGCCGGCGGCCGTACTTaGCCTTGCAGTGCAAAATGTGTTTGGCGAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GVLLSPRAGGRT*PCSAKCVWRGS Trigger: ACTTCCTCGCCAAACACATTTTGCACTGCAAGGCCAAGTACGGCCGCCGGCCCGGGGACTTAATAACACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 72 bp | GGCCGTCAGGTAATCGAAGAGGATCAGATCGGTCCATaGTACCAAGTCCACCAGCTCCGCCTGGCTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GRQVIEEDQIGP*YQVHQLRLAEV Trigger: AACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCTGATCCTCTTCGATTACCTGACGGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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| CDS CAA 90 bp | GTCAAAGTTGGCCGTCAGGTAATCGAAGAGGATCAGATCGGTCCATaGTACCAAGTCCACCAGCTCCGCCTGGCTGAGGTTGGTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VKVGRQVIEEDQIGP*YQVHQLRLAEVGQL Trigger: GAGCTGACCAACCTCAGCCAGGCGGAGCTGGTGGACTTGGTACAATGGACCGATCTGATCCTCTTCGATTACCTGACGGCCAACTTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099678.5 |
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