RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FIZ1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061374

Ensembl transcript IDs: ENSMUST00000077385.15, ENSMUST00000165320.3, ENSMUST00000167804.9, ENSMUST00000207030.2, ENSMUST00000207412.2, ENSMUST00000207946.2, ENSMUST00000208944.2, ENSMUST00000209060.2

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGGGATTAGGCCACAACCATTCCAGACACCAGCCCATTCCAAGTaGATAGGAGTATGTGCATCTGGGTTAGTCCAACCTAAAGGGCCA +
Preference number: 1 (lower is better)
Translates to: SGIRPQPFQTPAHSK*IGVCASGLVQPKGP
Trigger: TGGCCCTTTAGGTTGGACTAACCCAGATGCACATACTCCTATCCACTTGGAATGGGCTGGTGTCTGGAATGGTTGTGGCCTAATCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR GCA 90 bp AAGGATCTGGAATGCTGGCTCACAGGGTGGTTAAAATCATGGGGGTaGCTACATGTTATCTTCAGAGAGATGTTAGTGGAGACCCGTTTT +
Preference number: 1 (lower is better)
Translates to: KDLECWLTGWLKSWG*LHVIFREMLVETRF
Trigger: AAAACGGGTCTCCACTAACATCTCTCTGAAGATAACATGTAGGCACCCCCATGATTTTAACCACCCTGTGAGCCAGCATTCCAGATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 90 bp AGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAACAATTATGTTCTTaGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: SLCRFQREIPQQLCS*TPFAEGCFTVGSGW
Trigger: CCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTTCTCTCTGAAACCTACAGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR TCA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTACCCCCATTCTCTAGATaGAGGATCTGGAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLPPFSR*RIWNAG
Trigger: GCCAGCATTCCAGATCCTTCATCTAGAGAATGGGGG...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATCTTACGGTCTGGCTCTaGACTCAGTGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHLTVWL*TQWAGV
Trigger: CACCCCTGCCCACTGAGTCCAGAGCCAGACCGTAAG...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGCTTACGGTCTGGCTCTaGACTCAGTGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SVQDGGRSVGSDHSAVRELTVWL*TQWAGV
Trigger: CACCCCTGCCCACTGAGTCCAGAGCCAGACCGTAAG...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR-3UTR TCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCTTGGACCCCCTTTGCTaGAGGATGTTTCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTLDPLC*RMFHCG
Trigger: CCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAA...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp CCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTGGGGTCACCAGTGGCTaGCAGGTGTCATTTGAGGGG +
Preference number: 2 (lower is better)
Translates to: PWPSSHIPLGHWNKESSCGVTSG*QVSFEG
Trigger: CCCCTCAAATGACACCTGCCAGCCACTGGTGACCCC...ACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR TCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGCCCCCATTCTCTAGATaGAGGATCTGGAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRPPFSR*RIWNAG
Trigger: GCCAGCATTCCAGATCCTTCATCTAGAGAATGGGGG...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCACTGTGGGTTCTGGGTaGCACCATTTTTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCTVGSG*HHFSRQ
Trigger: CTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGT...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATATTTCACTGTGGGTTCTaGGTGGCACCATTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: VRGQVEAHRRETPGQVPIFHCGF*VAPFFQ
Trigger: CTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAA...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR TCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCCCCCATTCTCTAGATaGAGGATCTGGAATGCTGGC +
Preference number: 2 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVPPFSR*RIWNAG
Trigger: GCCAGCATTCCAGATCCTTCATCTAGAGAATGGGGG...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGCTTACGGTCTGGCTCTaGACTCAGTGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWLTVWL*TQWAGV
Trigger: CACCCCTGCCCACTGAGTCCAGAGCCAGACCGTAAG...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCACTGTGGGTTCTGGGTaGCACCATTTTTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: RQISVILIFWGHQWLAGVTVGSG*HHFSRQ
Trigger: CTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGT...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACTTTCACTGTGGGTTCTaGGTGGCACCATTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GWQVSFEGFLEESKILPHFHCGF*VAPFFQ
Trigger: CTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAA...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCTTTCACTGTGGGTTCTaGGTGGCACCATTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTFHCGF*VAPFFQ
Trigger: CTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAA...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATACTATGTACCCAGTCTTaGAGGCCAGTTGATTTGAAC +
Preference number: 2 (lower is better)
Translates to: VRGQVEAHRRETPGQVPILCTQS*RPVDLN
Trigger: GTTCAAATCAACTGGCCTCCAAGACTGGGTACATAG...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR CCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCTGCTGGCTCACAGGGTaGTTAAAATCATGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: RQISVILIFWGHQWLAGVCWLTG*LKSWGC
Trigger: GCACCCCCATGATTTTAACCACCCTGTGAGCCAGCA...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGTGCTGGCTCACAGGGTaGTTAAAATCATGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: SVQDGGRSVGSDHSAVRECWLTG*LKSWGC
Trigger: GCACCCCCATGATTTTAACCACCCTGTGAGCCAGCA...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGCTTACGGTCTGGCTCTaGACTCAGTGGGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQLTVWL*TQWAGV
Trigger: CACCCCTGCCCACTGAGTCCAGAGCCAGACCGTAAG...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAATTCCAGGCAGGGGCCTaGCTTGTCTTACGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: SRGLKVNSLCRFQREIPQFQAGA*LVLRSG
Trigger: GCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAA...TTGGGGAATTTCTCTCTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCCAACAATTATGTTCTTaGACCCCCTTTGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTQQLCS*TPFAEG
Trigger: TCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTG...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCAAGGATCTGGAATGCTaGCTCACAGGGTGGTTAAAA +
Preference number: 2 (lower is better)
Translates to: SGWQVSFEGFLEESKILPKDLEC*LTGWLK
Trigger: TTTTAACCACCCTGTGAGCCAGCATTCCAGATCCTT...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGGTTATACTCATTTTCTaGGGTCACCAGTGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: SVQDGGRSVGSDHSAVREVILIF*GHQWLA
Trigger: TGCCAGCCACTGGTGACCCCAGAAAATGAGTATAAC...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCAACAATTATGTTCTTaGACCCCCTTTGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCQQLCS*TPFAEG
Trigger: TCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTG...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCCTATGTACCCAGTCTTaGAGGCCAGTTGATTTGAAC +
Preference number: 2 (lower is better)
Translates to: RQISVILIFWGHQWLAGVLCTQS*RPVDLN
Trigger: GTTCAAATCAACTGGCCTCCAAGACTGGGTACATAG...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAAACTGTGGGTTCTGGGTaGCACCATTTTTCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SRGLKVNSLCRFQREIPQTVGSG*HHFSRQ
Trigger: CTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGT...TTGGGGAATTTCTCTCTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp CCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTTACAGGAAGCAAAATTaGCGGAAGGCAGATTTCGGT +
Preference number: 2 (lower is better)
Translates to: PWPSSHIPLGHWNKESSCYRKQN*RKADFG
Trigger: ACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTA...ACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR GCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCTTAAAATCATGGGGGTaGCTACATGTTATCTTCAGA +
Preference number: 2 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCLKSWG*LHVIFR
Trigger: TCTGAAGATAACATGTAGGCACCCCCATGATTTTAA...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CCA 90 bp TGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTAGTGTTATACTCATTTTCTaGGGTCACCAGTGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: WPSSHIPLGHWNKESSCSVILIF*GHQWLA
Trigger: TGCCAGCCACTGGTGACCCCAGAAAATGAGTATAAC...ACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR CAA 90 bp ACCCGTTTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTaGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: TRFSLLCTQSWRPVD*NMPHSRGLKVNSLC
Trigger: ACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAAACGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp GGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTaGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGG +
Preference number: 3 (lower is better)
Translates to: GFWVAPFFQAGA*LVLRSGSGLSG
Trigger: CCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CAA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAGTTCTTGGACCCCCTTaGCTGAAGGATGTTTCACTG +
Preference number: 3 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLVLGPP*LKDVSL
Trigger: CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAAC...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp CCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTaGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: PFAEGCFTVGSG*HHFSRQGPGLS
Trigger: AGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CAA 90 bp GGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGCTGGCAGGTGTCATTaGAGGGGTTCCTGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: GEKPLAKFPYPLGTLEQRAGRCH*RGSWRS
Trigger: ACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC...TCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR CCA 72 bp GCCTCAATGTCTACCACCTCCACCAGGTCACAGGATTaGGAAATCGTGGTCAAAGGACTGTGCTCTACAGCA +
Preference number: 3 (lower is better)
Translates to: ASMSTTSTRSQD*EIVVKGLCSTA
Trigger: TGCTGTAGAGCACAGTCCTTTGACCACGATTTCCCAATCCTGTGACCTGGTGGAGGTGGTAGACATTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR CAA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGGTTCTTGGACCCCCTTaGCTGAAGGATGTTTCACTG +
Preference number: 3 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVVLGPP*LKDVSL
Trigger: CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAAC...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp CTACCACCTCCACCAGGTCACAGGATTGGGAAATCGTaGTCAAAGGACTGTGCTCTACAGCATAAGGGAATG +
Preference number: 3 (lower is better)
Translates to: LPPPPGHRIGKS*SKDCALQHKGM
Trigger: CATTCCCTTATGCTGTAGAGCACAGTCCTTTGACCACGATTTCCCAATCCTGTGACCTGGTGGAGGTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR TCA 72 bp AATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTaGAGGATGTTTCACTGTGGGTTCTGGGTGGCACCA +
Preference number: 3 (lower is better)
Translates to: NSPTIMFLDPLC*RMFHCGFWVAP
Trigger: TGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp AACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTaGAACAAAGAGTCAAGTTGTAGTGATGGAAAGACC +
Preference number: 3 (lower is better)
Translates to: NPWPSSHIPLGH*NKESSCSDGKT
Trigger: GGTCTTTCCATCACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR CCA 72 bp AGGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTaGGACATTGGAACAAAGAGTCAAGTTGTAGTGATG +
Preference number: 3 (lower is better)
Translates to: RRETPGQVPISP*DIGTKSQVVVM
Trigger: CATCACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
3UTR-3UTR CAA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCGTTCTTGGACCCCCTTaGCTGAAGGATGTTTCACTG +
Preference number: 3 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLVLGPP*LKDVSL
Trigger: CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAAC...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR GCA 72 bp GAATGCTGGCTCACAGGGTGGTTAAAATCATGGGGGTaGCTACATGTTATCTTCAGAGAGATGTTAGTGGAG +
Preference number: 3 (lower is better)
Translates to: ECWLTGWLKSWG*LHVIFREMLVE
Trigger: CTCCACTAACATCTCTCTGAAGATAACATGTAGGCACCCCCATGATTTTAACCACCCTGTGAGCCAGCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp GTGGAGACCCGTTTTTCATTACTATGTACCCAGTCTTaGAGGCCAGTTGATTTGAACATGCCACATTCCAGG +
Preference number: 3 (lower is better)
Translates to: VETRFSLLCTQS*RPVDLNMPHSR
Trigger: CCTGGAATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAAACGGGTCTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp GATCTGGAATGCTGGCTCACAGGGTGGTTAAAATCATaGGGGTGCCTACATGTTATCTTCAGAGAGATGTTA +
Preference number: 3 (lower is better)
Translates to: DLECWLTGWLKS*GCLHVIFREML
Trigger: TAACATCTCTCTGAAGATAACATGTAGGCACCCCCATGATTTTAACCACCCTGTGAGCCAGCATTCCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR-3UTR CAA 90 bp TTTCAGTACAGGAAGCAAAATTGGCGGAAGGCAGATTTCGGTTATACTCATTTTGTTCTTGGACCCCCTTaGCTGAAGGATGTTTCACTG +
Preference number: 3 (lower is better)
Translates to: FQYRKQNWRKADFGYTHFVLGPP*LKDVSL
Trigger: CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAAC...AAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR TCA 72 bp TTTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTaGTTTGAACATGCCACATTCCAGGGGTCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: FFITMYPVLEAS*FEHATFQGSQS
Trigger: ACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CCA 72 bp TCTACCCTGATCTTCTTTCAGTACAGGAAGCAAAATTaGCGGAAGGCAGATTTCGGTTATACTCATTTTCTG +
Preference number: 3 (lower is better)
Translates to: STLIFFQYRKQN*RKADFGYTHFL
Trigger: CAGAAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAAGAAGATCAGGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCCCGGTGCTGCCGCTTaGGATGGCGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGPGAAA*DGGPGW
Trigger: CCAGCCTGGGCCGCCATCTCAAGCGGCAGCACCGGG...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGCCCGGTGCTGCCGCTTaGGATGGCGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRPGAAA*DGGPGW
Trigger: CCAGCCTGGGCCGCCATCTCAAGCGGCAGCACCGGG...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGCGPVG*KLPAMV
Trigger: GACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCA...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCCAGCTGGTTGCTCCTaGTCCCTCCAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGPAGCS*SLQALS
Trigger: GGAGAGGGCCTGGAGGGAGCAGGAGCAACCAGCTGG...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGTGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGWLARR*SSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCA...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGGPEAQ*QMVLVL
Trigger: CAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCC...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGAAAGA*SFPEPS
Trigger: CGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGC...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGTCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGSSCYG*RSRVPA
Trigger: GGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGA...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGAGGCCGGGGCTAGGCTaGAGGGGAGAGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRRPGLG*RGEGSV
Trigger: CACACTTCCCTCTCCCCTGCAGCCTAGCCCCGGCCT...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGTGGGGGCAGCGAGGCTaGCGCGGCTGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTWGQRG*RGCCSL
Trigger: GAGGCTGCAGCAGCCGCGGCAGCCTCGCTGCCCCCA...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGAGGCGCAGTGGCAGATaGTGCTGGTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGRRSGR*CWSWSS
Trigger: GCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCT...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCACGTTGCAACATACTaGGCAGGGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGHVATY*AGGAQG
Trigger: CCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTG...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGCAGGGCAGCCAGCGCTaGGTACAGCGCCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTQGSQR*VQRPAV
Trigger: CACTGCGGGGCGCTGTACGCAGCGCTGGCTGCCCTG...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCGTGGCGGAAGAACTTaGCACACTCCAGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGRGGRT*HTPGTG
Trigger: TCCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACG...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCCCGGTGCTGCCGCTTaGGATGGCGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHPGAAA*DGGPGW
Trigger: CCAGCCTGGGCCGCCATCTCAAGCGGCAGCACCGGG...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGCCCGGTGCTGCCGCTTaGGATGGCGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLPGAAA*DGGPGW
Trigger: CCAGCCTGGGCCGCCATCTCAAGCGGCAGCACCGGG...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGTGGGGGCAGCGAGGCTaGCGCGGCTGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLWGQRG*RGCCSL
Trigger: GAGGCTGCAGCAGCCGCGGCAGCCTCGCTGCCCCCA...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTCAGGGCAGCCAGCGCTaGGTACAGCGCCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PFFQAGAWLVLRSGSGLSQGSQR*VQRPAV
Trigger: CACTGCGGGGCGCTGTACGCAGCGCTGGCTGCCCTG...ACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRSGRWC*SWSSDG
Trigger: CCCATCGCTGCTCCAGGACCAGCACCATCTGCCACT...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLAAGDA*GSTRGG
Trigger: TCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGC...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCAGGCCGGGGCTAGGCTaGAGGGGAGAGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGRPGLG*RGEGSV
Trigger: CACACTTCCCTCTCCCCTGCAGCCTAGCCCCGGCCT...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCAGTCCCCAGCTGGTTaGTCCTGCTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLGGTIFPGRGLACLTVWQSPAG*SCSLQA
Trigger: GGCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTG...CCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp ATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGGCTGCCGCGGCTGCTaGAGCCTCTGCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: MFHCGFWVAPFFQAGAWLGCRGC*SLCQSP
Trigger: TGGGGACTGGCAGAGGCTGCAGCAGCCGCGGCAGCC...AAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCTGGGGGCAGCGAGGCTaGCGCGGCTGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCWGQRG*RGCCSL
Trigger: GAGGCTGCAGCAGCCGCGGCAGCCTCGCTGCCCCCA...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCGTTGGAGGTGCATTaGTCCCCTGCAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRALEVH*SPAGHE
Trigger: CTCATGACCTGCAGGGGAGCAATGCACCTCCAACGC...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCC +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAVPREQ*LQLGHA
Trigger: GGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTATGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLWLARR*SSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCA...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCGGCGTCCCAAGTCTaGGGGGCGGCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCPASQV*GAAPTS
Trigger: AGAGGTGGGGGCCGCCCCCCAGACTTGGGACGCCGG...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATCCGGCGTCCCAAGTCTaGGGGGCGGCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHPASQV*GAAPTS
Trigger: AGAGGTGGGGGCCGCCCCCCAGACTTGGGACGCCGG...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGCCGGCGTCCCAAGTCTaGGGGGCGGCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRPASQV*GAAPTS
Trigger: AGAGGTGGGGGCCGCCCCCCAGACTTGGGACGCCGG...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTAAAGA*SFPEPS
Trigger: CGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGC...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAGTGGCTGGGCCTGAGTaGGCCTCTAAATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLVAGPE*ASKWLA
Trigger: GGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCAC...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAAAGDA*GSTRGG
Trigger: TCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGC...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTCAGTCCCCAGCTGGTTaGTCCTGCTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAQSPAG*SCSLQA
Trigger: GGCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTG...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGCAGTCCCCAGCTGGTTaGTCCTGCTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVQSPAG*SCSLQA
Trigger: GGCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTG...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATGGCTGCCGCGGCTGCTaGAGCCTCTGCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHGCRGC*SLCQSP
Trigger: TGGGGACTGGCAGAGGCTGCAGCAGCCGCGGCAGCC...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCGGCTGCCGCGGCTGCTaGAGCCTCTGCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGWQVSFEGFLEESKILPGCRGC*SLCQSP
Trigger: TGGGGACTGGCAGAGGCTGCAGCAGCCGCGGCAGCC...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTCGPVG*KLPAMV
Trigger: GACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCA...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCC +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHVPREQ*LQLGHA
Trigger: GGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCC +
Preference number: 4 (lower is better)
Translates to: RLTGEKPLAKFPYPLGTLVPREQ*LQLGHA
Trigger: GGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC...CAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp TCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTTGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLWVLGGTIFPGRGLACLWLARR*SSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCA...AAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PFFQAGAWLVLRSGSGLSGPEAQ*QMVLVL
Trigger: CAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCC...ACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTGTGGACCACCTGGTaGTGCAGCAGGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTVWTTW*CSRPVE
Trigger: CTCCACTGGCCTGCTGCACCACCAGGTGGTCCACAC...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATATGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: VRGQVEAHRRETPGQVPICCRLR*RPRLER
Trigger: TCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCA...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCCGGCGTCCCAAGTCTaGGGGGCGGCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVPASQV*GAAPTS
Trigger: AGAGGTGGGGGCCGCCCCCCAGACTTGGGACGCCGG...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCCCGGCGTCCCAAGTCTaGGGGGCGGCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: RQISVILIFWGHQWLAGVPASQV*GAAPTS
Trigger: AGAGGTGGGGGCCGCCCCCCAGACTTGGGACGCCGG...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CAA 72 bp TCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTaGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGWHHFSRQGPG*SYGLALDSVGR
Trigger: CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTACACGTTGCAACATACTaGGCAGGGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLHVATY*AGGAQG
Trigger: CCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTG...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTGTGGCTGGGCCTGAGTaGGCCTCTAAATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAVAGPE*ASKWLA
Trigger: GGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCAC...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRFQVSR*TEQLLT
Trigger: TGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAA...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RLTGEKPLAKFPYPLGTLAAGDA*GSTRGG
Trigger: TCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGC...CAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACAGGCCGGGGCTAGGCTaGAGGGGAGAGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHRPGLG*RGEGSV
Trigger: CACACTTCCCTCTCCCCTGCAGCCTAGCCCCGGCCT...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTCCAGCTGGTTGCTCCTaGTCCCTCCAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGCFTVGSGWHHFSRQGPPAGCS*SLQALS
Trigger: GGAGAGGGCCTGGAGGGAGCAGGAGCAACCAGCTGG...AGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGGGCTGCCGCGGCTGCTaGAGCCTCTGCCAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVQDGGRSVGSDHSAVREGCRGC*SLCQSP
Trigger: TGGGGACTGGCAGAGGCTGCAGCAGCCGCGGCAGCC...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRCGPVG*KLPAMV
Trigger: GACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCA...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCACAGGGCAGCCAGCGCTaGGTACAGCGCCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PPLLKDVSLWVLGGTIFPQGSQR*VQRPAV
Trigger: CACTGCGGGGCGCTGTACGCAGCGCTGGCTGCCCTG...TGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGGAAGGGCCGCTCTGTaGCATGCAGCAGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLGRAAL*HAAAGD
Trigger: GTCACCGGCTGCTGCATGGCACAGAGCGGCCCTTCC...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCGGAAGGGCCGCTCTGTaGCATGCAGCAGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTGRAAL*HAAAGD
Trigger: GTCACCGGCTGCTGCATGGCACAGAGCGGCCCTTCC...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGTCCTGGAGCAGCGATaGGGGCAGGAACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVVLEQR*GQEPQA
Trigger: TGCCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGAC...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTSGRWC*SWSSDG
Trigger: CCCATCGCTGCTCCAGGACCAGCACCATCTGCCACT...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATAAGGCGCAGTGGCAGATaGTGCTGGTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VRGQVEAHRRETPGQVPIRRSGR*CWSWSS
Trigger: GCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCT...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp GAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EGCFTVGSGWHHFSRQGPGPEAQ*QMVLVL
Trigger: CAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCC...AGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGTGTGGACCACCTGGTaGTGCAGCAGGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVVWTTW*CSRPVE
Trigger: CTCCACTGGCCTGCTGCACCACCAGGTGGTCCACAC...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACTGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHCCRLR*RPRLER
Trigger: TCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCA...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCTGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTCCRLR*RPRLER
Trigger: TCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCA...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTCACGTTGCAACATACTaGGCAGGGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAHVATY*AGGAQG
Trigger: CCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTG...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTCACGTTGCAACATACTaGGCAGGGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PFFQAGAWLVLRSGSGLSHVATY*AGGAQG
Trigger: CCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTG...ACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCGTGGCTGGGCCTGAGTaGGCCTCTAAATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTVAGPE*ASKWLA
Trigger: GGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCAC...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCAAGDA*GSTRGG
Trigger: TCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGC...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATACGCAGTGGCAGATGGTaGTGGTCCTGGAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VRGQVEAHRRETPGQVPIRSGRW*WSWSSD
Trigger: ATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCG...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGTGGACCACCTGGTGGTaGAGCAGGCCAGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVWTTWW*SRPVES
Trigger: AGACTCCACTGGCCTGCTGCACCACCAGGTGGTCCA...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCAGGCCGGGGCTAGGCTaGAGGGGAGAGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCRPGLG*RGEGSV
Trigger: CACACTTCCCTCTCCCCTGCAGCCTAGCCCCGGCCT...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCCAGCTGGTTGCTCCTaGTCCCTCCAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGWQVSFEGFLEESKILPPAGCS*SLQALS
Trigger: GGAGAGGGCCTGGAGGGAGCAGGAGCAACCAGCTGG...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGATGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GEKPLAKFPYPLGTLEQRCGPVG*KLPAMV
Trigger: GACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCA...TCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCGCGTTGGAGGTGCATTaGTCCCCTGCAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGALEVH*SPAGHE
Trigger: CTCATGACCTGCAGGGGAGCAATGCACCTCCAACGC...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGCGTTGGAGGTGCATTaGTCCCCTGCAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTALEVH*SPAGHE
Trigger: CTCATGACCTGCAGGGGAGCAATGCACCTCCAACGC...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCTGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGWQVSFEGFLEESKILPWLARR*SSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCA...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGCGTGGCGGAAGAACTTaGCACACTCCAGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVRGGRT*HTPGTG
Trigger: TCCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACG...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATGGAAGGGCCGCTCTGTaGCATGCAGCAGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHGRAAL*HAAAGD
Trigger: GTCACCGGCTGCTGCATGGCACAGAGCGGCCCTTCC...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRGPEAQ*QMVLVL
Trigger: CAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCC...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCGTGTGGACCACCTGGTaGTGCAGCAGGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTVWTTW*CSRPVE
Trigger: CTCCACTGGCCTGCTGCACCACCAGGTGGTCCACAC...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCAAAGA*SFPEPS
Trigger: CGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGC...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCACGTTGCAACATACTaGGCAGGGGGAGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHHVATY*AGGAQG
Trigger: CCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTG...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGCACAGCGAGGGCACTTaGATGGCTTCACATCGGTGT +
Preference number: 4 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTHSEGT*MASHRC
Trigger: ACACCGATGTGAAGCCATTCAAGTGCCCTCGCTGTG...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCCAAGTTGAAGCTATaGTTGAAGCCCTTACCGCAT +
Preference number: 4 (lower is better)
Translates to: SRQGPGLSYGLALDSVGRAKLKL*LKPLPH
Trigger: ATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGC...CCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCAGTCCCCAGCTGGTTaGTCCTGCTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVQSPAG*SCSLQA
Trigger: GGCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTG...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCACAGTCCCCAGCTGGTTaGTCCTGCTCCCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPLLKDVSLWVLGGTIFPQSPAG*SCSLQA
Trigger: GGCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTG...TGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGGGGGCAGCGAGGCTaGCGCGGCTGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLWGQRG*RGCCSL
Trigger: GAGGCTGCAGCAGCCGCGGCAGCCTCGCTGCCCCCA...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVFQQRR*VEVALT
Trigger: TGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAA...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SLWVLGGTIFPGRGLACLFQQRR*VEVALT
Trigger: TGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAA...AAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAFQQRR*VEVALT
Trigger: TGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAA...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCCGTGGCGGAAGAACTTaGCACACTCCAGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTRGGRT*HTPGTG
Trigger: TCCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACG...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGGTCCTGGAGCAGCGATaGGGGCAGGAACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRVLEQR*GQEPQA
Trigger: TGCCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGAC...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RLTGEKPLAKFPYPLGTLSGRWC*SWSSDG
Trigger: CCCATCGCTGCTCCAGGACCAGCACCATCTGCCACT...CAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp ATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: MFHCGFWVAPFFQAGAWLSGRWC*SWSSDG
Trigger: CCCATCGCTGCTCCAGGACCAGCACCATCTGCCACT...AAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGATGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GEKPLAKFPYPLGTLEQRCCRLR*RPRLER
Trigger: TCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCA...TCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCGCGAGGGCACTTGAATaGCTTCACATCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGARALE*LHIGVC
Trigger: GCACACACCGATGTGAAGCCATTCAAGTGCCCTCGC...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RQISVILIFWGHQWLAGVAAAGA*SFPEPS
Trigger: CGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGC...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTGAGCCTCTAAATGGCTaGCCAAAGCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: DVSLWVLGGTIFPGRGLAEPLNG*PKPGQM
Trigger: CATCTGCCCCGGCTTTGGCCAGCCATTTAGAGGCTC...AGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGAGCCTCTAAATGGCTaGCCAAAGCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: HFSRQGPGLSYGLALDSVEPLNG*PKPGQM
Trigger: CATCTGCCCCGGCTTTGGCCAGCCATTTAGAGGCTC...CACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGTCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SVQDGGRSVGSDHSAVRESSCYG*RSRVPA
Trigger: GGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGA...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATGACATGCGTGGGGCTTaGGAGCCGTGTGTCGAGCAA +
Preference number: 4 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHDMRGA*EPCVEQ
Trigger: TTGCTCGACACACGGCTCTCAAGCCCCACGCATGTC...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGGTGGCTGGGCCTGAGTaGGCCTCTAAATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVVAGPE*ASKWLA
Trigger: GGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCAC...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATCGCAGTGGCAGATGGTaGTGGTCCTGGAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHRSGRW*WSWSSD
Trigger: ATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCG...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCTGGACCACCTGGTGGTaGAGCAGGCCAGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCWTTWW*SRPVES
Trigger: AGACTCCACTGGCCTGCTGCACCACCAGGTGGTCCA...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGGACCACCTGGTGGTaGAGCAGGCCAGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRWTTWW*SRPVES
Trigger: AGACTCCACTGGCCTGCTGCACCACCAGGTGGTCCA...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTFQQRR*VEVALT
Trigger: TGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAA...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACGCGTTGGAGGTGCATTaGTCCCCTGCAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHALEVH*SPAGHE
Trigger: CTCATGACCTGCAGGGGAGCAATGCACCTCCAACGC...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCGTGGCGGAAGAACTTaGCACACTCCAGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCRGGRT*HTPGTG
Trigger: TCCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACG...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGTCCTGGAGCAGCGATaGGGGCAGGAACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLKDVSLWVLGGTIFPGRVLEQR*GQEPQA
Trigger: TGCCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGAC...CCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAAGGCGCAGTGGCAGATaGTGCTGGTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLLKDVSLWVLGGTIFPRRSGR*CWSWSS
Trigger: GCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCT...TGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGTGTGGACCACCTGGTaGTGCAGCAGGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLKDVSLWVLGGTIFPGRVWTTW*CSRPVE
Trigger: CTCCACTGGCCTGCTGCACCACCAGGTGGTCCACAC...CCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACGAGCCTCTAAATGGCTaGCCAAAGCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHEPLNG*PKPGQM
Trigger: CATCTGCCCCGGCTTTGGCCAGCCATTTAGAGGCTC...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGGACATGCGTGGGGCTTaGGAGCCGTGTGTCGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVDMRGA*EPCVEQ
Trigger: TTGCTCGACACACGGCTCTCAAGCCCCACGCATGTC...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCACAGCGAGGGCACTTaGATGGCTTCACATCGGTGT +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHHSEGT*MASHRC
Trigger: ACACCGATGTGAAGCCATTCAAGTGCCCTCGCTGTG...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCGCAGTGGCAGATGGTaGTGGTCCTGGAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVRSGRW*WSWSSD
Trigger: ATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCG...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGTGGACCACCTGGTGGTaGAGCAGGCCAGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SVQDGGRSVGSDHSAVREWTTWW*SRPVES
Trigger: AGACTCCACTGGCCTGCTGCACCACCAGGTGGTCCA...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGCCAGCTGGTTGCTCCTaGTCCCTCCAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGPAGCS*SLQALS
Trigger: GGAGAGGGCCTGGAGGGAGCAGGAGCAACCAGCTGG...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGCAGGGCAGCCAGCGCTaGGTACAGCGCCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQQGSQR*VQRPAV
Trigger: CACTGCGGGGCGCTGTACGCAGCGCTGGCTGCCCTG...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCACGTGGCGGAAGAACTTaGCACACTCCAGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: PPLLKDVSLWVLGGTIFPRGGRT*HTPGTG
Trigger: TCCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACG...TGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCCTGTGTAGCTTCAGATaGCTGGAGAGGTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGLCSFR*LERLLS
Trigger: GCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAG...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHVPQSH*YSVSSE
Trigger: TTCGGAAGACACACTGTACCAGTGCGACTGCGGGAC...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp ATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: MFHCGFWVAPFFQAGAWLVPQSH*YSVSSE
Trigger: TTCGGAAGACACACTGTACCAGTGCGACTGCGGGAC...AAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLVPQSH*YSVSSE
Trigger: TTCGGAAGACACACTGTACCAGTGCGACTGCGGGAC...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCTCGTTCACCAGTGTGTaGGCGCAGGTGGTTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGWQVSFEGFLEESKILPSFTSV*AQVVSQ
Trigger: TTGGCTAACCACCTGCGCTCACACACTGGTGAACGA...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLAAGDA*GSTRGG
Trigger: TCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGC...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTTGGACCACCTGGTGGTaGAGCAGGCCAGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PWPSSHIPLGHWNKESSCWTTWW*SRPVES
Trigger: AGACTCCACTGGCCTGCTGCACCACCAGGTGGTCCA...ACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCCCAGCTGGTTGCTCCTaGTCCCTCCAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLPAGCS*SLQALS
Trigger: GGAGAGGGCCTGGAGGGAGCAGGAGCAACCAGCTGG...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGGTCCTGGAGCAGCGATaGGGGCAGGAACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGVLEQR*GQEPQA
Trigger: TGCCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGAC...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWGPEAQ*QMVLVL
Trigger: CAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCC...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGTCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWSSCYG*RSRVPA
Trigger: GGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGA...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTAGTTCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WPSSHIPLGHWNKESSCSSSCYG*RSRVPA
Trigger: GGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGA...ACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR TCA 90 bp GGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGACACAGCGAGGGCACTTaGATGGCTTCACATCGGTGT +
Preference number: 4 (lower is better)
Translates to: GEKPLAKFPYPLGTLEQRHSEGT*MASHRC
Trigger: ACACCGATGTGAAGCCATTCAAGTGCCCTCGCTGTG...TCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR TCA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGCACAGCGAGGGCACTTaGATGGCTTCACATCGGTGT +
Preference number: 4 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVHSEGT*MASHRC
Trigger: ACACCGATGTGAAGCCATTCAAGTGCCCTCGCTGTG...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CGGAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: RKADFGYTHFLGSPVAGRFQVSR*TEQLLT
Trigger: TGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAA...CCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GTCAGGGGTCAGGTTGAGGCTCACAGGAGAGAAACCCCTGGCCAAGTTCCCATAGCCAAGTTGAAGCTATaGTTGAAGCCCTTACCGCAT +
Preference number: 4 (lower is better)
Translates to: VRGQVEAHRRETPGQVPIAKLKL*LKPLPH
Trigger: ATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGC...TATGGGAACTTGGCCAGGGGTTTCTCTCCTGTGAGCCTCAACCTGACCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp TTTCAGTACAGGAAGCAAAATTGGCGGAAGGCAGATTTCGGTTATACTCATTTTTGGGGGCAGCGAGGCTaGCGCGGCTGCTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FQYRKQNWRKADFGYTHFWGQRG*RGCCSL
Trigger: GAGGCTGCAGCAGCCGCGGCAGCCTCGCTGCCCCCA...AAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLCGPVG*KLPAMV
Trigger: GACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCA...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCC +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLVPREQ*LQLGHA
Trigger: GGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAAGGAAGGGCCGCTCTGTaGCATGCAGCAGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRGLKVNSLCRFQREIPQGRAAL*HAAAGD
Trigger: GTCACCGGCTGCTGCATGGCACAGAGCGGCCCTTCC...TTGGGGAATTTCTCTCTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCCTGTGTAGCTTCAGATaGCTGGAGAGGTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTLCSFR*LERLLS
Trigger: GCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAG...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTAGTAGGCGCAGTGGCAGATaGTGCTGGTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: WPSSHIPLGHWNKESSCSRRSGR*CWSWSS
Trigger: GCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCT...ACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCGTGTGGACCACCTGGTaGTGCAGCAGGCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLVWTTW*CSRPVE
Trigger: CTCCACTGGCCTGCTGCACCACCAGGTGGTCCACAC...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGTCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQSSCYG*RSRVPA
Trigger: GGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGA...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGACATGCGTGGGGCTTaGGAGCCGTGTGTCGAGCAA +
Preference number: 4 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWDMRGA*EPCVEQ
Trigger: TTGCTCGACACACGGCTCTCAAGCCCCACGCATGTC...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: RQISVILIFWGHQWLAGVFQVSR*TEQLLT
Trigger: TGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAA...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGCGCAGTGGCAGATGGTaGTGGTCCTGGAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWRSGRW*WSWSSD
Trigger: ATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCG...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACGCCAAGTTGAAGCTATaGTTGAAGCCCTTACCGCAT +
Preference number: 4 (lower is better)
Translates to: GWQVSFEGFLEESKILPHAKLKL*LKPLPH
Trigger: ATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGC...GTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGGCGTTGGAGGTGCATTaGTCCCCTGCAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGALEVH*SPAGHE
Trigger: CTCATGACCTGCAGGGGAGCAATGCACCTCCAACGC...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGGTCCTGGAGCAGCGATaGGGGCAGGAACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQVLEQR*GQEPQA
Trigger: TGCCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGAC...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLAAAGA*SFPEPS
Trigger: CGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGC...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGGAGCCTCTAAATGGCTaGCCAAAGCCGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGEPLNG*PKPGQM
Trigger: CATCTGCCCCGGCTTTGGCCAGCCATTTAGAGGCTC...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGCACAGCGAGGGCACTTaGATGGCTTCACATCGGTGT +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGHSEGT*MASHRC
Trigger: ACACCGATGTGAAGCCATTCAAGTGCCCTCGCTGTG...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGGTGGCTGGGCCTGAGTaGGCCTCTAAATGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLVAGPE*ASKWLA
Trigger: GGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCAC...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGACCGCATCGAGGACATaGGTGGGGCTTGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQTASRT*VGLESR
Trigger: ACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGT...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLFQQRR*VEVALT
Trigger: TGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAA...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTTCAGTACAGGAAGCAAAATTGGCGGAAGGCAGATTTCGGTTATACTCATTTTGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCC +
Preference number: 4 (lower is better)
Translates to: FQYRKQNWRKADFGYTHFVPREQ*LQLGHA
Trigger: GGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC...AAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCCTGTGTAGCTTCAGATaGCTGGAGAGGTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: RQISVILIFWGHQWLAGVLCSFR*LERLLS
Trigger: GCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAG...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp GGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGACTGTGTAGCTTCAGATaGCTGGAGAGGTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: GEKPLAKFPYPLGTLEQRLCSFR*LERLLS
Trigger: GCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAG...TCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATTGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHCCRLR*RPRLER
Trigger: TCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCA...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGGACATGCGTGGGGCTTaGGAGCCGTGTGTCGAGCAA +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLDMRGA*EPCVEQ
Trigger: TTGCTCGACACACGGCTCTCAAGCCCCACGCATGTC...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR TCA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACA +
Preference number: 4 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGFQVSR*TEQLLT
Trigger: TGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAA...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTTCAGTACAGGAAGCAAAATTGGCGGAAGGCAGATTTCGGTTATACTCATTTTTGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FQYRKQNWRKADFGYTHFWLARR*SSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCA...AAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATAGGCGCAGTGGCAGATaGTGCTGGTCCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHRRSGR*CWSWSS
Trigger: GCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCT...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWVPQSH*YSVSSE
Trigger: TTCGGAAGACACACTGTACCAGTGCGACTGCGGGAC...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGG +
Preference number: 4 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHSGRWC*SWSSDG
Trigger: CCCATCGCTGCTCCAGGACCAGCACCATCTGCCACT...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAAGCGAGGGCACTTGAATaGCTTCACATCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SRGLKVNSLCRFQREIPQARALE*LHIGVC
Trigger: GCACACACCGATGTGAAGCCATTCAAGTGCCCTCGC...TTGGGGAATTTCTCTCTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQVPQSH*YSVSSE
Trigger: TTCGGAAGACACACTGTACCAGTGCGACTGCGGGAC...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
3UTR CAA 72 bp CAGGAGAGAAACCCCTGGCCAAGTTCCCATATCCCCTaGGGACATTGGAACAAAGAGTCAAGTTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: QERNPWPSSHIP*GHWNKESSCSD
Trigger: ATCACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGGGTTTCTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR GCA 90 bp TGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTAGTCTGTGTAGCTTCAGATaGCTGGAGAGGTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: WPSSHIPLGHWNKESSCSLCSFR*LERLLS
Trigger: GCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAG...ACTACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CCA 90 bp AAATTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGGCGAGGGCACTTGAATaGCTTCACATCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KFPNNYVLGPPLLKDVSLARALE*LHIGVC
Trigger: GCACACACCGATGTGAAGCCATTCAAGTGCCCTCGC...CAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCGCCAAGTTGAAGCTATaGTTGAAGCCCTTACCGCAT +
Preference number: 4 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLAKLKL*LKPLPH
Trigger: ATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGC...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATGCGAGGGCACTTGAATaGCTTCACATCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHARALE*LHIGVC
Trigger: GCACACACCGATGTGAAGCCATTCAAGTGCCCTCGC...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CCA 90 bp TTTCAGTACAGGAAGCAAAATTGGCGGAAGGCAGATTTCGGTTATACTCATTTTGCGAGGGCACTTGAATaGCTTCACATCGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: FQYRKQNWRKADFGYTHFARALE*LHIGVC
Trigger: GCACACACCGATGTGAAGCCATTCAAGTGCCCTCGC...AAAATGAGTATAACCGAAATCTGCCTTCCGCCAATTTTGCTTCCTGTACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
3UTR CAA 72 bp TCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTaGAACATGCCACATTCCAGGGGTCTCAAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SLLCTQSWRPVD*NMPHSRGLKVN
Trigger: ATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR GCA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATGCCAAGTTGAAGCTATaGTTGAAGCCCTTACCGCAT +
Preference number: 4 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHAKLKL*LKPLPH
Trigger: ATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGC...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp AGAGCCCTCGTCCCCCGGGAGCAATGCCTCCAGCTTGGGCACGCCTaGCCCGGTAGGGCTCAGGAGCAGCCCGGCGTCCCAAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: RALVPREQCLQLGHA*PGRAQEQPGVPSLG
Trigger: CCCCAGACTTGGGACGCCGGGCTGCTCCTGAGCCCTACCGGGGCAGGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGACGAGGGCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp GGGTCCCGGCCCGCCAGCCGCCTGATTGCCCTCACCATCGGGGGCTaGCTCCCCGCTACCCTCACCATGGCTTGCACGCCGATGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSRPASRLIALTIGG*LPATLTMACTPMLL
Trigger: GAGGAGCATCGGCGTGCAAGCCATGGTGAGGGTAGCGGGGAGGCAGCCCCCGATGGTGAGGGCAATCAGGCGGCTGGCGGGCCGGGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 90 bp TTCTTGCTACGGCTGGAGGAGCCGGGTCCCGGCCCGCCAGCCGCCTaGTTGCCCTCACCATCGGGGGCTGCCTCCCCGCTACCCTCACCA +
Preference number: 5 (lower is better)
Translates to: FLLRLEEPGPGPPAA*LPSPSGAASPLPSP
Trigger: TGGTGAGGGTAGCGGGGAGGCAGCCCCCGATGGTGAGGGCAATCAGGCGGCTGGCGGGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp AGCCGGAGCCTGGTCATTCCCAGAGCCCTCGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCCTGCCCCGGTAGGGCTCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SRSLVIPRALVPREQ*LQLGHACPGRAQEQ
Trigger: CTGCTCCTGAGCCCTACCGGGGCAGGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGACGAGGGCTCTGGGAATGACCAGGCTCCGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp GTGCGGCCCAGTGGGCTGCAAGCTCCCGGCCATGGTCAAAACGCCTaGCACAGGCACCGCATGCAAATGGGGGCAGCGAGGCTGCCGCGG +
Preference number: 5 (lower is better)
Translates to: VRPSGLQAPGHGQNA*HRHRMQMGAARLPR
Trigger: CCGCGGCAGCCTCGCTGCCCCCATTTGCATGCGGTGCCTGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp GGCTGCAGGGGAGAGGGAAGTGTGCCCCGGTGCTGCCGCTTGAGATaGCGGCCCAGGCTGGAGCGAGAGGAGAAGCGGAGCTCACAGACC +
Preference number: 5 (lower is better)
Translates to: GCRGEGSVPRCCRLR*RPRLEREEKRSSQT
Trigger: GGTCTGTGAGCTCCGCTTCTCCTCTCGCTCCAGCCTGGGCCGCCATCTCAAGCGGCAGCACCGGGGCACACTTCCCTCTCCCCTGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp CAGCCAGCGCTGCGTACAGCGCCCCGCAGTGGCCACAGCCATAAGTaGCTGGGCCTGAGTGAGCCTCTAAATGGCTGGCCAAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QPALRTAPRSGHSHK*LGLSEPLNGWPKPG
Trigger: CCCCGGCTTTGGCCAGCCATTTAGAGGCTCACTCAGGCCCAGCCACTTATGGCTGTGGCCACTGCGGGGCGCTGTACGCAGCGCTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 90 bp GGCAGGGGAAGGGCCGCTCTGTGCCATGCAGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGAAGAACTTGCCACACTCCAGGCACG +
Preference number: 5 (lower is better)
Translates to: GRGRAALCHAAAGDA*GSTRGGRTCHTPGT
Trigger: CGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGCTGCATGGCACAGAGCGGCCCTTCCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp CCCGCAGTCGCACTGGTACAGTGTGTCTTCCGAAGATGCTTCGGCTaGTGCAGCCGGAGCCTGGTCATTCCCAGAGCCCTCGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: PAVALVQCVFRRCFG*CSRSLVIPRALVPR
Trigger: CCGGGGGACGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGCAGCCGAAGCATCTTCGGAAGACACACTGTACCAGTGCGACTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp CTCTCCTGCCACCTCCGGACCCCCACCCGAGGCCCAAACCTGCGTTaGAGGTGCATTGCTCCCCTGCAGGTCATGAGTGAGCTTGTGGCG +
Preference number: 5 (lower is better)
Translates to: LSCHLRTPTRGPNLR*RCIAPLQVMSELVA
Trigger: CGCCACAAGCTCACTCATGACCTGCAGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCTCGGGTGGGGGTCCGGAGGTGGCAGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp TGCCACCTCCGGACCCCCACCCGAGGCCCAAACCTGCGTTGGAGGTaGATTGCTCCCCTGCAGGTCATGAGTGAGCTTGTGGCGTTCCAG +
Preference number: 5 (lower is better)
Translates to: CHLRTPTRGPNLRWR*IAPLQVMSELVAFQ
Trigger: CTGGAACGCCACAAGCTCACTCATGACCTGCAGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCTCGGGTGGGGGTCCGGAGGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp GCAGTCGCACTGGTACAGTGTGTCTTCCGAAGATGCTTCGGCTGCTaGAGCCGGAGCCTGGTCATTCCCAGAGCCCTCGTCCCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: AVALVQCVFRRCFGC*SRSLVIPRALVPRE
Trigger: CTCCCGGGGGACGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGCAGCCGAAGCATCTTCGGAAGACACACTGTACCAGTGCGACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp TTCACATCGGTGTGTGCGGCCCAGTGGGCTGCAAGCTCCCGGCCATaGTCAAAACGCCTGGCACAGGCACCGCATGCAAATGGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: FTSVCAAQWAASSRP*SKRLAQAPHANGGS
Trigger: GCTGCCCCCATTTGCATGCGGTGCCTGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCACACACCGATGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp AGGGCACTTGAATGGCTTCACATCGGTGTGTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTCAAAACGCCTGGCACAGGCACCGCA +
Preference number: 5 (lower is better)
Translates to: RALEWLHIGVCGPVG*KLPAMVKTPGTGTA
Trigger: TGCGGTGCCTGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCACACACCGATGTGAAGCCATTCAAGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp CAGCGAGGGCACTTGAATGGCTTCACATCGGTGTGTGCGGCCCAGTaGGCTGCAAGCTCCCGGCCATGGTCAAAACGCCTGGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: QRGHLNGFTSVCAAQ*AASSRPWSKRLAQA
Trigger: TGCCTGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCACACACCGATGTGAAGCCATTCAAGTGCCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CTGGGGTCACCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTACCAGTCCCCAGCTGGTaGCTCCTGCTCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGSPVAGRCHLRGSWRSLPVPSW*LLLPPG
Trigger: GCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTGG...TAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGGTGACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGCAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGQPKIF*LRLEEP
Trigger: CGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTG...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp CTGGCCAAAGCCGGGGCAGATGCGAAGAAGGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAAGATGCTTCGGCTGCTGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: LAKAGADAKKVPQSH*YSVSSEDASAAAAG
Trigger: TCCGGCTGCAGCAGCCGAAGCATCTTCGGAAGACACACTGTACCAGTGCGACTGCGGGACCTTCTTCGCATCTGCCCCGGCTTTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp ACAGCTTCTCACATTCGGAACAGCCAAAGATCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCCCGCCAGCCGCCTGATTGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: TASHIRNSQRSSCYG*RSRVPARQPPDCPH
Trigger: GTGAGGGCAATCAGGCGGCTGGCGGGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTGTTCCGAATGTGAGAAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 90 bp GAGGCCCAAACCTGCGTTGGAGGTGCATTGCTCCCCTGCAGGTCATaGGTGAGCTTGTGGCGTTCCAGCAGCGCAGGTGCGTTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: EAQTCVGGALLPCRS*VSLWRSSSAGALKS
Trigger: CGACTTCAACGCACCTGCGCTGCTGGAACGCCACAAGCTCACTCATGACCTGCAGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp AACTCTTGCCACATTCGCTACAGTGAAAGGGGACCCGAGGCGCAGTaGCAGATGGTGCTGGTCCTGGAGCAGCGATGGGGGCAGGAACCA +
Preference number: 5 (lower is better)
Translates to: NSCHIRYSERGPEAQ*QMVLVLEQRWGQEP
Trigger: TGGTTCCTGCCCCCATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCCCCTTTCACTGTAGCGAATGTGGCAAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS-3UTR CAA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCCCAGTCCCCAGCTGGTaGCTCCTGCTCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTPVPSW*LLLPPG
Trigger: GCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTGG...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGCCAGTCCCCAGCTGGTaGCTCCTGCTCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLPVPSW*LLLPPG
Trigger: GCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTGG...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGAGCAGCGCAGGTGCGTaGAAGTCGCGCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTSSAGA*KSRSQR
Trigger: TCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCT...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGAGCAGCGCAGGTGCGTaGAAGTCGCGCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: VLGGTIFPGRGLACLTVWSSAGA*KSRSQR
Trigger: TCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCT...CCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCAGCAGCGCAGGTGCGTaGAAGTCGCGCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGSSAGA*KSRSQR
Trigger: TCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCT...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCA +
Preference number: 5 (lower is better)
Translates to: SLWVLGGTIFPGRGLACLGHAWG*RAVCRA
Trigger: TGCTCGACACACGGCTCTCAAGCCCCACGCATGTCC...AAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTGGGCAGGGAGGTGGTTAGCCAAGTaGAAGCTATGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PGRGLACLTVWLWTQWAGRWLAK*KLCLKP
Trigger: GGGCTTCAAGCATAGCTTCAACTTGGCTAACCACCT...CCCTGCCCACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTTCGTGGCGGAAGAACTaGCCACACTCCAGGCACGGG +
Preference number: 5 (lower is better)
Translates to: SLWVLGGTIFPGRGLACLSWRKN*PHSRHG
Trigger: CCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGA...AAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp GTCGAGCAAAGTGGCGCCTCAGGTCTGATCGGTAACGGAAACTCTTaGCACATTCGCTACAGTGAAAGGGGACCCGAGGCGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VEQSGASGLIGNGNS*HIRYSERGPEAQWQ
Trigger: CTGCCACTGCGCCTCGGGTCCCCTTTCACTGTAGCGAATGTGGCAAGAGTTTCCGTTACCGATCAGACCTGAGGCGCCACTTTGCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS-3UTR CAA 90 bp AAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCA +
Preference number: 5 (lower is better)
Translates to: KDVSLWVLGGTIFPGRGLGHAWG*RAVCRA
Trigger: TGCTCGACACACGGCTCTCAAGCCCCACGCATGTCC...CAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCCAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGQPKIF*LRLEEP
Trigger: CGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTG...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 90 bp AGCCAAGTTGAAGCTATGCTTGAAGCCCTTACCGCATCGAGGACATaGGTGGGGCTTGAGAGCCGTGTGTCGAGCAAAGTGGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: SQVEAMLEALTASRT*VGLESRVSSKVAPQ
Trigger: CTGAGGCGCCACTTTGCTCGACACACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGTAAGGGCTTCAAGCATAGCTTCAACTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS-3UTR CAA 90 bp TCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCA +
Preference number: 5 (lower is better)
Translates to: SWTPFAEGCFTVGSGWHHGHAWG*RAVCRA
Trigger: TGCTCGACACACGGCTCTCAAGCCCCACGCATGTCC...ATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTAGGCCCAAACCTGCGTaGGAGGTGCATTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: EGCFTVGSGWHHFSRQGPRPKPA*EVHCSP
Trigger: AGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCT...AGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCTCGTGGCGGAAGAACTaGCCACACTCCAGGCACGGG +
Preference number: 5 (lower is better)
Translates to: SGWQVSFEGFLEESKILPSWRKN*PHSRHG
Trigger: CCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGA...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GCFTVGSGWHHFSRQGPGRCLER*LSVMKP
Trigger: GGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCT...GCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 90 bp GTGGGGCTTGAGAGCCGTGTGTCGAGCAAAGTGGCGCCTCAGGTCTaGTCGGTAACGGAAACTCTTGCCACATTCGCTACAGTGAAAGGG +
Preference number: 5 (lower is better)
Translates to: VGLESRVSSKVAPQV*SVTETLATFATVKG
Trigger: CCCTTTCACTGTAGCGAATGTGGCAAGAGTTTCCGTTACCGATCAGACCTGAGGCGCCACTTTGCTCGACACACGGCTCTCAAGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS GCA 90 bp CACTCCAGGCACGGGAACGGCTTTTCCCCGGTATGGACCAACACATaGCTTTCCAGGTCTCGAGGTGAACGGAACAGCTTCTCACATTCG +
Preference number: 5 (lower is better)
Translates to: HSRHGNGFSPVWTNT*LSRSRGERNSFSHS
Trigger: CGAATGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAAAGGCATGTGTTGGTCCATACCGGGGAAAAGCCGTTCCCGTGCCTGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 90 bp AAGTTGAAGCTATGCTTGAAGCCCTTACCGCATCGAGGACATGCGTaGGGCTTGAGAGCCGTGTGTCGAGCAAAGTGGCGCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: KLKLCLKPLPHRGHA*GLRAVCRAKWRLRS
Trigger: AGACCTGAGGCGCCACTTTGCTCGACACACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGTAAGGGCTTCAAGCATAGCTTCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS-3UTR CAA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGCCAGTCCCCAGCTGGTaGCTCCTGCTCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGPVPSW*LLLPPG
Trigger: GCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTGG...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCAGCAGCGCAGGTGCGTaGAAGTCGCGCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: RQISVILIFWGHQWLAGVSSAGA*KSRSQR
Trigger: TCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCT...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCAGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCAGGCCCAAACCTGCGTaGGAGGTGCATTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PVAGRCHLRGSWRSLRYCRPKPA*EVHCSP
Trigger: AGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCT...GCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGTCTCGTGGCGGAAGAACTaGCCACACTCCAGGCACGGG +
Preference number: 5 (lower is better)
Translates to: RQISVILIFWGHQWLAGVSWRKN*PHSRHG
Trigger: CCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGA...GACACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGAGGTGGTTAGCCAAGTaGAAGCTATGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LWVLGGTIFPGRGLACLTRWLAK*KLCLKP
Trigger: GGGCTTCAAGCATAGCTTCAACTTGGCTAACCACCT...CGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCCCAGTCCCCAGCTGGTaGCTCCTGCTCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLPVPSW*LLLPPG
Trigger: GCCTGGAGGGAGCAGGAGCAACCAGCTGGGGACTGG...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCAGGCAGGAGGCCCAAACCTGCGTaGGAGGTGCATTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LLKDVSLWVLGGTIFPGRRPKPA*EVHCSP
Trigger: AGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCT...CCTGCCTGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGAGGCCCAAACCTGCGTaGGAGGTGCATTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVRPKPA*EVHCSP
Trigger: AGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCT...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCCTGGCCAAGTTCCCATATCCCCTTGGGACATTGGAACAAAGAGTCAAGTTGTTCGTGGCGGAAGAACTaGCCACACTCCAGGCACGGG +
Preference number: 5 (lower is better)
Translates to: PWPSSHIPLGHWNKESSCSWRKN*PHSRHG
Trigger: CCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGA...ACAACTTGACTCTTTGTTCCAATGTCCCAAGGGGATATGGGAACTTGGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
CDS-3UTR CAA 90 bp GCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCCACCAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: AGRCHLRGSWRSLRYCPTRCLER*LSVMKP
Trigger: GGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCT...GGTGGGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCA +
Preference number: 5 (lower is better)
Translates to: QLCSWTPFAEGCFTVGSGGHAWG*RAVCRA
Trigger: TGCTCGACACACGGCTCTCAAGCCCCACGCATGTCC...CCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCATTTTTCCAGGCAGGGGCCTGGCTTGTCTTACGGTCTGGCTCTGGACTCAGTAGGTGGTTAGCCAAGTaGAAGCTATGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PFFQAGAWLVLRSGSGLSRWLAK*KLCLKP
Trigger: GGGCTTCAAGCATAGCTTCAACTTGGCTAACCACCT...ACTGAGTCCAGAGCCAGACCGTAAGACAAGCCAGGCCCCTGCCTGGAAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp CCCCCTTTGCTGAAGGATGTTTCACTGTGGGTTCTGGGTGGCACCATTTTTCCACAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PPLLKDVSLWVLGGTIFPQPKIF*LRLEEP
Trigger: CGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTG...TGGAAAAATGGTGCCACCCAGAACCCACAGTGAAACATCCTTCAGCAAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGTGTTCAGGATGGGGGAAGATCAGTAGGGTCAGACCATTCTGCAGTAAGGGAGCAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SVQDGGRSVGSDHSAVREQPKIF*LRLEEP
Trigger: CGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTG...CTCCCTTACTGCAGAATGGTCTGACCCTACTGATCTTCCCCCATCCTGAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGTGGCTGGCAGGTGTCATTTGAGGGGTTCCTGGAGGAGTCTAAGATATTGCCCAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SGWQVSFEGFLEESKILPRCLER*LSVMKP
Trigger: GGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCT...GGGCAATATCTTAGACTCCTCCAGGAACCCCTCAAATGACACCTGCCAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp AGGCCAGTTGATTTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCA +
Preference number: 5 (lower is better)
Translates to: RPVDLNMPHSRGLKVNSLGHAWG*RAVCRA
Trigger: TGCTCGACACACGGCTCTCAAGCCCCACGCATGTCC...GAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAAATCAACTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGAGCAGCGCAGGTGCGTaGAAGTCGCGCTCACAGCGA +
Preference number: 5 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWSSAGA*KSRSQR
Trigger: TCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCT...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVRCLER*LSVMKP
Trigger: GGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCT...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TTCCCCAACAATTATGTTCTTGGACCCCCTTTGCTGAAGGATGTTTCACTGTGGAGGCCCAAACCTGCGTaGGAGGTGCATTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: FPNNYVLGPPLLKDVSLWRPKPA*EVHCSP
Trigger: AGGGGAGCAATGCACCTCCAACGCAGGTTTGGGCCT...CCACAGTGAAACATCCTTCAGCAAAGGGGGTCCAAGAACATAATTGTTGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGAGAGAAATTCCCCAATCGTGGCGGAAGAACTaGCCACACTCCAGGCACGGG +
Preference number: 5 (lower is better)
Translates to: SRGLKVNSLCRFQREIPQSWRKN*PHSRHG
Trigger: CCCGTGCCTGGAGTGTGGCAAGTTCTTCCGCCACGA...TTGGGGAATTTCTCTCTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp GAAGGCAGATTTCGGTTATACTCATTTTCTGGGGTCACCAGTGGCTGGCAGGTGAGGTGGTTAGCCAAGTaGAAGCTATGCTTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: EGRFRLYSFSGVTSGWQVRWLAK*KLCLKP
Trigger: GGGCTTCAAGCATAGCTTCAACTTGGCTAACCACCT...CACCTGCCAGCCACTGGTGACCCCAGAAAATGAGTATAACCGAAATCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 90 bp CTTTTCCCCGGTATGGACCAACACATGCCTTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACATTCGGAACAGCCAAAGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LFPGMDQHMPFQVSR*TEQLLTFGTAKDLL
Trigger: AAGAAGATCTTTGGCTGTTCCGAATGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAAAGGCATGTGTTGGTCCATACCGGGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TTGAACATGCCACATTCCAGGGGTCTCAAAGTGAATAGTCTCTGTAGGTTTCAGCAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: LNMPHSRGLKVNSLCRFQQPKIF*LRLEEP
Trigger: CGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTG...CTGAAACCTACAGAGACTATTCACTTTGAGACCCCTGGAATGTGGCATGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS-3UTR CAA 90 bp TTTTCATTACTATGTACCCAGTCTTGGAGGCCAGTTGATTTGAACATGCCACATAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCC +
Preference number: 5 (lower is better)
Translates to: FSLLCTQSWRPVDLNMPHRCLER*LSVMKP
Trigger: GGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCT...ATGTGGCATGTTCAAATCAACTGGCCTCCAAGACTGGGTACATAGTAATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 72 bp CGGCTGGAGGAGCCGGGTCCCGGCCCGCCAGCCGCCTaGTTGCCCTCACCATCGGGGGCTGCCTCCCCGCTA +
Preference number: 6 (lower is better)
Translates to: RLEEPGPGPPAA*LPSPSGAASPL
Trigger: TAGCGGGGAGGCAGCCCCCGATGGTGAGGGCAATCAGGCGGCTGGCGGGCCGGGACCCGGCTCCTCCAGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp TGGAGGAGCCGGGTCCCGGCCCGCCAGCCGCCTGATTaGCCTCACCATCGGGGGCTGCCTCCCCGCTACCCT +
Preference number: 6 (lower is better)
Translates to: WRSRVPARQPPD*PHHRGLPPRYP
Trigger: AGGGTAGCGGGGAGGCAGCCCCCGATGGTGAGGGCAATCAGGCGGCTGGCGGGCCGGGACCCGGCTCCTCCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp GTCCCCCGGGAGCAATGCCTCCAGCTTGGGCACGCCTaGCCCGGTAGGGCTCAGGAGCAGCCCGGCGTCCCA +
Preference number: 6 (lower is better)
Translates to: VPREQCLQLGHA*PGRAQEQPGVP
Trigger: TGGGACGCCGGGCTGCTCCTGAGCCCTACCGGGGCAGGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp CCCGCCAGCCGCCTGATTGCCCTCACCATCGGGGGCTaGCTCCCCGCTACCCTCACCATGGCTTGCACGCCG +
Preference number: 6 (lower is better)
Translates to: PASRLIALTIGG*LPATLTMACTP
Trigger: CGGCGTGCAAGCCATGGTGAGGGTAGCGGGGAGGCAGCCCCCGATGGTGAGGGCAATCAGGCGGCTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 90 bp TGGTCATTCCCAGAGCCCTCGTCCCCCGGGAGCAATGCCTCCAGCTaGGGCACGCCTGCCCCGGTAGGGCTCAGGAGCAGCCCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: WSFPEPSSPGSNASS*GTPAPVGLRSSPAS
Trigger: GGACGCCGGGCTGCTCCTGAGCCCTACCGGGGCAGGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGACGAGGGCTCTGGGAATGACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp GCCTCCCCGCTACCCTCACCATGGCTTGCACGCCGATaGTCCTCCAGGGCAGCCAGCGCTGCGTACAGCGCC +
Preference number: 6 (lower is better)
Translates to: ASPLPSPWLARR*SSRAASAAYSA
Trigger: GGCGCTGTACGCAGCGCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCATGGTGAGGGTAGCGGGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp CTGGTCATTCCCAGAGCCCTCGTCCCCCGGGAGCAATaGCTCCAGCTTGGGCACGCCTGCCCCGGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: LVIPRALVPREQ*LQLGHACPGRA
Trigger: AGCCCTACCGGGGCAGGCGTGCCCAAGCTGGAGGCATTGCTCCCGGGGGACGAGGGCTCTGGGAATGACCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 72 bp TCACCATCGGGGGCTGCCTCCCCGCTACCCTCACCATaGCTTGCACGCCGATGCTCCTCCAGGGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPSGAASPLPSP*LARRCSSRAAS
Trigger: GCTGGCTGCCCTGGAGGAGCATCGGCGTGCAAGCCATGGTGAGGGTAGCGGGGAGGCAGCCCCCGATGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 72 bp GTGAAAGGGGACCCGAGGCGCAGTGGCAGATGGTGCTaGTCCTGGAGCAGCGATGGGGGCAGGAACCACAGG +
Preference number: 6 (lower is better)
Translates to: VKGDPRRSGRWC*SWSSDGGRNHR
Trigger: CCTGTGGTTCCTGCCCCCATCGCTGCTCCAGGACCAGCACCATCTGCCACTGCGCCTCGGGTCCCCTTTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207412.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS CCA 72 bp AGTGGGCTGCAAGCTCCCGGCCATGGTCAAAACGCCTaGCACAGGCACCGCATGCAAATGGGGGCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: SGLQAPGHGQNA*HRHRMQMGAAR
Trigger: CCTCGCTGCCCCCATTTGCATGCGGTGCCTGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 72 bp TCTTCCGAAGATGCTTCGGCTGCTGCAGCCGGAGCCTaGTCATTCCCAGAGCCCTCGTCCCCCGGGAGCAAT +
Preference number: 6 (lower is better)
Translates to: SSEDASAAAAGA*SFPEPSSPGSN
Trigger: ATTGCTCCCGGGGGACGAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGCAGCCGAAGCATCTTCGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 72 bp CACATTCGGAACAGCCAAAGATCTTCTTGCTACGGCTaGAGGAGCCGGGTCCCGGCCCGCCAGCCGCCTGAT +
Preference number: 6 (lower is better)
Translates to: HIRNSQRSSCYG*RSRVPARQPPD
Trigger: ATCAGGCGGCTGGCGGGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTGTTCCGAATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 72 bp ACCTGCGTTGGAGGTGCATTGCTCCCCTGCAGGTCATaGGTGAGCTTGTGGCGTTCCAGCAGCGCAGGTGCG +
Preference number: 6 (lower is better)
Translates to: TCVGGALLPCRS*VSLWRSSSAGA
Trigger: CGCACCTGCGCTGCTGGAACGCCACAAGCTCACTCATGACCTGCAGGGGAGCAATGCACCTCCAACGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 72 bp AGGGCCGCTCTGTGCCATGCAGCAGCCGGTGACGCTTaGGGTAGCACTCGTGGCGGAAGAACTTGCCACACT +
Preference number: 6 (lower is better)
Translates to: RAALCHAAAGDA*GSTRGGRTCHT
Trigger: AGTGTGGCAAGTTCTTCCGCCACGAGTGCTACCTCAAGCGTCACCGGCTGCTGCATGGCACAGAGCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp GAATGGCTTCACATCGGTGTGTGCGGCCCAGTGGGCTaGAAGCTCCCGGCCATGGTCAAAACGCCTGGCACA +
Preference number: 6 (lower is better)
Translates to: EWLHIGVCGPVG*KLPAMVKTPGT
Trigger: TGTGCCAGGCGTTTTGACCATGGCCGGGAGCTTGCAGCCCACTGGGCCGCACACACCGATGTGAAGCCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 72 bp GACCCTCCACCTCCACAAACCGAACAGGGACCCACGTaGCAACATACTGAGCAGGGGGAGCTCAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: DPPPPQTEQGPT*QHTEQGELRGG
Trigger: GCCTCCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTGGGTCCCTGTTCGGTTTGTGGAGGTGGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp ACCCTCCACCTCCACAAACCGAACAGGGACCCACGTTaGAACATACTGAGCAGGGGGAGCTCAGGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: TLHLHKPNRDPR*NILSRGSSGEA
Trigger: TGCCTCCCCTGAGCTCCCCCTGCTCAGTATGTTGCAACGTGGGTCCCTGTTCGGTTTGTGGAGGTGGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp GCACTGGTACAGTGTGTCTTCCGAAGATGCTTCGGCTaGTGCAGCCGGAGCCTGGTCATTCCCAGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: ALVQCVFRRCFG*CSRSLVIPRAL
Trigger: GAGGGCTCTGGGAATGACCAGGCTCCGGCTGCAGCAGCCGAAGCATCTTCGGAAGACACACTGTACCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CCA 72 bp GCCGGGGCAGATGCGAAGAAGGTCCCGCAGTCGCACTaGTACAGTGTGTCTTCCGAAGATGCTTCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AGADAKKVPQSH*YSVSSEDASAA
Trigger: AGCAGCCGAAGCATCTTCGGAAGACACACTGTACCAGTGCGACTGCGGGACCTTCTTCGCATCTGCCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 72 bp TTGAAGCCCTTACCGCATCGAGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCAAAGTGGCGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LKPLPHRGHAWG*RAVCRAKWRLR
Trigger: CCTGAGGCGCCACTTTGCTCGACACACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGTAAGGGCTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS GCA 72 bp GTCATGAGTGAGCTTGTGGCGTTCCAGCAGCGCAGGTaGGTTGAAGTCGCGCTCACAGCGAGGGCACTTGAA +
Preference number: 6 (lower is better)
Translates to: VMSELVAFQQRR*VEVALTARALE
Trigger: TTCAAGTGCCCTCGCTGTGAGCGCGACTTCAACGCACCTGCGCTGCTGGAACGCCACAAGCTCACTCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 72 bp AACAGCTTCTCACATTCGGAACAGCCAAAGATCTTCTaGCTACGGCTGGAGGAGCCGGGTCCCGGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: NSFSHSEQPKIF*LRLEEPGPGPP
Trigger: TGGCGGGCCGGGACCCGGCTCCTCCAGCCGTAGCAAGAAGATCTTTGGCTGTTCCGAATGTGAGAAGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 90 bp AAGCTATGCTTGAAGCCCTTACCGCATCGAGGACATGCGTGGGGCTaGAGAGCCGTGTGTCGAGCAAAGTGGCGCCTCAGGTCTGATCGG +
Preference number: 6 (lower is better)
Translates to: KLCLKPLPHRGHAWG*RAVCRAKWRLRSDR
Trigger: CCGATCAGACCTGAGGCGCCACTTTGCTCGACACACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGTAAGGGCTTCAAGCATAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS GCA 72 bp AGTGGCGCCTCAGGTCTGATCGGTAACGGAAACTCTTaGCACATTCGCTACAGTGAAAGGGGACCCGAGGCG +
Preference number: 6 (lower is better)
Translates to: SGASGLIGNGNS*HIRYSERGPEA
Trigger: CGCCTCGGGTCCCCTTTCACTGTAGCGAATGTGGCAAGAGTTTCCGTTACCGATCAGACCTGAGGCGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS CCA 72 bp CCACACTCCAGGCACGGGAACGGCTTTTCCCCGGTATaGACCAACACATGCCTTTCCAGGTCTCGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: PHSRHGNGFSPV*TNTCLSRSRGE
Trigger: TTCACCTCGAGACCTGGAAAGGCATGTGTTGGTCCATACCGGGGAAAAGCCGTTCCCGTGCCTGGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS GCA 72 bp GAAGCTATGCTTGAAGCCCTTACCGCATCGAGGACATaGGTGGGGCTTGAGAGCCGTGTGTCGAGCAAAGTG +
Preference number: 6 (lower is better)
Translates to: EAMLEALTASRT*VGLESRVSSKV
Trigger: CACTTTGCTCGACACACGGCTCTCAAGCCCCACGCATGTCCTCGATGCGGTAAGGGCTTCAAGCATAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000207946.2
ENSMUST00000208944.2
ENSMUST00000209060.2
CDS GCA 72 bp CACGGGAACGGCTTTTCCCCGGTATGGACCAACACATaGCTTTCCAGGTCTCGAGGTGAACGGAACAGCTTC +
Preference number: 6 (lower is better)
Translates to: HGNGFSPVWTNT*LSRSRGERNSF
Trigger: GAAGCTGTTCCGTTCACCTCGAGACCTGGAAAGGCATGTGTTGGTCCATACCGGGGAAAAGCCGTTCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS CAA 72 bp TCCATGCCCCTGTGTAGCTTCAGATGCCTGGAGAGGTaGCTAAGCGTGATGAAGCCCTTGCCACAGATGTGG +
Preference number: 6 (lower is better)
Translates to: SMPLCSFRCLER*LSVMKPLPQMW
Trigger: CCACATCTGTGGCAAGGGCTTCATCACGCTTAGCAACCTCTCCAGGCATCTGAAGCTACACAGGGGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2
CDS TCA 72 bp GGTATGGACCAACACATGCCTTTCCAGGTCTCGAGGTaGACGGAACAGCTTCTCACATTCGGAACAGCCAAA +
Preference number: 6 (lower is better)
Translates to: GMDQHMPFQVSR*TEQLLTFGTAK
Trigger: TTTGGCTGTTCCGAATGTGAGAAGCTGTTCCGTTCACCTCGAGACCTGGAAAGGCATGTGTTGGTCCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077385.15
ENSMUST00000165320.3
ENSMUST00000167804.9
ENSMUST00000207030.2
ENSMUST00000208944.2