Pregenerated sensors for FITM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048486Ensembl transcript IDs: ENSMUST00000109418.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTaGGAAGGTGAGGGCTCTGAGGAACTTGGGGTGTGGCTCAGAACC | + |
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Preference number: 1 (lower is better) Translates to: LTHATPPHTAGEACS*EGEGSEELGVWLRT Trigger: GGTTCTGAGCCACACCCCAAGTTCCTCAGAGCCCTCACCTTCTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | TTCACACCTGCACCTCATGGCAGCCCAAGCCCAAACACTCACCCATaGCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: FTPAPHGSPSPNTHP*HASSHGRRGMLLRR Trigger: CCTTCTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTTGGGCTTGGGCTGCCATGAGGTGCAGGTGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | CAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTaGCTCTGCCTTCCCGGTGCTGGGATTAGAGGCGTGCAGCACCGT | + |
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Preference number: 1 (lower is better) Translates to: QCGPGKVTSTSQRSA*LCLPGAGIRGVQHR Trigger: ACGGTGCTGCACGCCTCTAATCCCAGCACCGGGAAGGCAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | CGGGGGAGGACAGGGCCCTTCTCATCAGACTGGAAGCCTGCCGCATaGGACGTGGGTGACAAGACTTCTTACCCTAACAGTCACGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: RGRTGPFSSDWKPAA*DVGDKTSYPNSHGE Trigger: TTCACCGTGACTGTTAGGGTAAGAAGTCTTGTCACCCACGTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGGGCCCTGTCCTCCCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | CTTAAGGAGATCACCCGGGGGAGGACAGGGCCCTTCTCATCAGACTaGAAGCCTGCCGCATGGGACGTGGGTGACAAGACTTCTTACCCT | + |
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Preference number: 1 (lower is better) Translates to: LKEITRGRTGPFSSD*KPAAWDVGDKTSYP Trigger: AGGGTAAGAAGTCTTGTCACCCACGTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGGGCCCTGTCCTCCCCCGGGTGATCTCCTTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | GGACAGGGCCCTTCTCATCAGACTGGAAGCCTGCCGCATGGGACGTaGGTGACAAGACTTCTTACCCTAACAGTCACGGTGAACACCATG | + |
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Preference number: 1 (lower is better) Translates to: GQGPSHQTGSLPHGT*VTRLLTLTVTVNTM Trigger: CATGGTGTTCACCGTGACTGTTAGGGTAAGAAGTCTTGTCACCCACGTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGGGCCCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR TCA 90 bp | AACTCTAAAGAGAAGCAGAGCCGGGGAGGCCACAGCAGAGAATCCTaGAGCCCTGATTCTCTCTTGACCCACACGATGAGGCAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NSKEKQSRGGHSRES*SPDSLLTHTMRQAA Trigger: AGCAGCCTGCCTCATCGTGTGGGTCAAGAGAGAATCAGGGCTTCAGGATTCTCTGCTGTGGCCTCCCCGGCTCTGCTTCTCTTTAGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | GCAATCTGGTACCCAGACAGTGACGGATGCACGTGGAAGCTCAGATaGTCCCAAAGCCTGGGGTTTACCACCAAGGGACAACAGACGCTT | + |
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Preference number: 1 (lower is better) Translates to: AIWYPDSDGCTWKLR*SQSLGFTTKGQQTL Trigger: AAGCGTCTGTTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGCATCTGAGCTTCCACGTGCATCCGTCACTGTCTGGGTACCAGATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | TCCATTTTACTGACAAGGCCAACAAGGGCTTGCACGCTGGTCAGGTaGTTTGGGAGGGATGCCAACGTTCACACCTGCACCTCATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SILLTRPTRACTLVR*FGRDANVHTCTSWQ Trigger: CTGCCATGAGGTGCAGGTGTGAACGTTGGCATCCCTCCCAAACCACCTGACCAGCGTGCAAGCCCTTGTTGGCCTTGTCAGTAAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR TCA 90 bp | ACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCCTTCTGTTGTaGACATGCAGCTTGAGAGTCTTTACCTGGGGACCAGCCCTACCA | + |
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Preference number: 1 (lower is better) Translates to: TNEPLATSCVCPLLL*TCSLRVFTWGPALP Trigger: TGGTAGGGCTGGTCCCCAGGTAAAGACTCTCAAGCTGCATGTTCACAACAGAAGGGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | GCTCAAAGAATCGCCTCCATTTTACTGACAAGGCCAACAAGGGCTTaGACGCTGGTCAGGTGGTTTGGGAGGGATGCCAACGTTCACACC | + |
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Preference number: 1 (lower is better) Translates to: AQRIASILLTRPTRA*TLVRWFGRDANVHT Trigger: GGTGTGAACGTTGGCATCCCTCCCAAACCACCTGACCAGCGTGCAAGCCCTTGTTGGCCTTGTCAGTAAAATGGAGGCGATTCTTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | CTCAGAGTTGGCCATGGGGAAGCTGTTAGAAGAACAGCATTACTGTaGCCTCTAAACTCTAAAGAGAAGCAGAGCCGGGGAGGCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LRVGHGEAVRRTALL*PLNSKEKQSRGGHS Trigger: GCTGTGGCCTCCCCGGCTCTGCTTCTCTTTAGAGTTTAGAGGCCACAGTAATGCTGTTCTTCTAACAGCTTCCCCATGGCCAACTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | TCCTTCCTTCTTTCTTCTTCCAGTCAGGAGCTCACAATGTGGCCCTaGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SFLLSSSSQELTMWP*QGNLNLTEICLPLP Trigger: AGGCAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGTGAGCTCCTGACTGGAAGAAGAAAGAAGGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | CTGTGTGTAGGTAACAGTGGCACGAACTATTCTCTGACTGCAATCTaGTACCCAGACAGTGACGGATGCACGTGGAAGCTCAGATGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LCVGNSGTNYSLTAI*YPDSDGCTWKLRCS Trigger: GGAGCATCTGAGCTTCCACGTGCATCCGTCACTGTCTGGGTACCAGATTGCAGTCAGAGAATAGTTCGTGCCACTGTTACCTACACACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR TCA 90 bp | CCCCACCCAGAGCAGAGAGGGAGGAGTGTCAAGTATAAGCATGTGTaGTTTCATCCATCTGATATGCAGAGAACAATGAGCAACTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: PHPEQRGRSVKYKHV*FHPSDMQRTMSNCE Trigger: TTCACAGTTGCTCATTGTTCTCTGCATATCAGATGGATGAAATCACACATGCTTATACTTGACACTCCTCCCTCTCTGCTCTGGGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | TGTGGAGCACACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTaGTCAAAGAATCGCCTCCATTTTACTGACAAGGCCAACAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CGAHMLSILCMISFQ*SKNRLHFTDKANKG Trigger: GCCCTTGTTGGCCTTGTCAGTAAAATGGAGGCGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTGTGCTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 90 bp | AAGTCAAATATCCTTTCAGTCCACTGTCAACAGAGCAAAACATCATaGGGACCCCTTTCTGCCTGCCTTTCTTCACCTTTGGTGACAACA | + |
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Preference number: 1 (lower is better) Translates to: KSNILSVHCQQSKTS*GPLSACLSSPLVTT Trigger: TGTTGTCACCAAAGGTGAAGAAAGGCAGGCAGAAAGGGGTCCCCATGATGTTTTGCTCTGTTGACAGTGGACTGAAAGGATATTTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 90 bp | GTGGTTGTATGTAATACAGGCGGCTTTGCGTGCTGGCTGGCTTCCTaGATCAGAGGGAAACATTTGCTCTCACTTCTATATTATCATAAT | + |
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Preference number: 1 (lower is better) Translates to: VVVCNTGGFACWLAS*IRGKHLLSLLYYHN Trigger: ATTATGATAATATAGAAGTGAGAGCAAATGTTTCCCTCTGATGCAGGAAGCCAGCCAGCACGCAAAGCCGCCTGTATTACATACAACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR TCA 90 bp | GCCTCCCGGCCTCCAGTTATATTTCTAAGAGAGGGAACATTCCTATaGGGTGCAATTTCATATGACAAGCCAAGAATTTGGTTTATACAA | + |
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Preference number: 1 (lower is better) Translates to: ASRPPVIFLREGTFL*GAISYDKPRIWFIQ Trigger: TTGTATAAACCAAATTCTTGGCTTGTCATATGAAATTGCACCTCATAGGAATGTTCCCTCTCTTAGAAATATAACTGGAGGCCGGGAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CAA 90 bp | CGGCAGGAGAGGCATGCTCCTGAGAAGGTGAGGGCTCTGAGGAACTaGGGGTGTGGCTCAGAACCCTGGGCACCACCCCACCCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RQERHAPEKVRALRN*GCGSEPWAPPHPEQ Trigger: CTGCTCTGGGTGGGGTGGTGCCCAGGGTTCTGAGCCACACCCCAAGTTCCTCAGAGCCCTCACCTTCTCAGGAGCATGCCTCTCCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCGCCAGAGAGTGTCCTTaGGGCATTGGGGTATTTAAC | + |
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Preference number: 2 (lower is better) Translates to: ARSPSVTNEPLATSCVCPARECP*GIGVFN Trigger: GTTAAATACCCCAATGCCTCAAGGACACTCTCTGGC...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCGGGTTGTTCTGTCTGTaGGCTGAAGAAAAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ARSPSVTNEPLATSCVCPGLFCL*AEEKRQ Trigger: CTGCCTCTTTTCTTCAGCTCACAGACAGAACAACCC...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCATGGGGACCCCTTTCTaGCTGCCTTTCTTCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: ARSPSVTNEPLATSCVCPMGTPF*LPFFTF Trigger: AAAGGTGAAGAAAGGCAGGCAGAAAGGGGTCCCCAT...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGCAGGAGCTCACAATGTaGCCCTGGCAAGGTAACCTC | + |
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Preference number: 2 (lower is better) Translates to: KHSPMPRLLTRQERHAPEQELTM*PWQGNL Trigger: GAGGTTACCTTGCCAGGGCCACATTGTGAGCTCCTG...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCAAATCCCTTAGGCTGTaGCACTTGTCCTGTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ARSPSVTNEPLATSCVCPKSLRL*HLSCGP Trigger: AGGACCACAGGACAAGTGCCACAGCCTAAGGGATTT...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGGTTCTGTCTGTGAGCTaGAGAAAAGAGGCAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KHSPMPRLLTRQERHAPEVLSVS*RKEAGP Trigger: TGGCCCTGCCTCTTTTCTTCAGCTCACAGACAGAAC...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGGCCTGGTCTACAGAGTaGGTTCCAGAACACGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TMWPWQGNLNLTEICLPLAWSTE*VPEHAG Trigger: CCCTGCGTGTTCTGGAACTCACTCTGTAGACCAGGC...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGTGTGAACATGCAGCTTaGGAGTCTTTACCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: KHSPMPRLLTRQERHAPECEHAA*ESLPGD Trigger: GTCCCCAGGTAAAGACTCTCAAGCTGCATGTTCACA...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGATGCTCCCAAAGCCTGGGGTTTACCACCAAGGGACAACAGACGCTTGCCCTTCTCATCAGACTaGAAGCCTGCCGCATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSDAPKAWGLPPRDNRRLPFSSD*KPAAWD Trigger: GTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGGG...CAAGCGTCTGTTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGCATCTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR GCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGACCGCCAGCAGAGTCTaGCAACTAAGCTTGTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TMWPWQGNLNLTEICLPLTASRV*QLSLFP Trigger: GGGGAACAAGCTTAGTTGGCAGACTCTGCTGGCGGT...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGATCACAGAGATCTGCCTaGCTCTGCCTTCCCGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SPNPIVSLSPASGQESLRSQRSA*LCLPGA Trigger: AGCACCGGGAAGGCAGAGGCAGGCAGATCTCTGTGA...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CAA 90 bp | CCACAGAGGACGCGGATGCTACAGCCAGAGAGTGTCCTTGAGGCATaGGGGTATTTAACAAAGAGCCTGCCAGAGACAAAGGCTTATCTC | + |
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Preference number: 2 (lower is better) Translates to: PQRTRMLQPESVLEA*GYLTKSLPETKAYL Trigger: GAGATAAGCCTTTGTCTCTGGCAGGCTCTTTGTTAAATACCCCAATGCCTCAAGGACACTCTCTGGCTGTAGCATCCGCGTCCTCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGACACAGCAGAGAATCCTaGAGCCCTGATTCTCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPNPIVSLSPASGQESLRHSRES*SPDSLL Trigger: CAAGAGAGAATCAGGGCTTCAGGATTCTCTGCTGTG...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGATGGCTGATTTGGCATaGTGGTTGTATGTAATACAG | + |
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Preference number: 2 (lower is better) Translates to: KHSPMPRLLTRQERHAPEMADLA*WLYVIQ Trigger: CTGTATTACATACAACCACCATGCCAAATCAGCCAT...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGACCCTGTTGGGAATCATaGCCAGGTGAAATGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: SPNPIVSLSPASGQESLRPCWES*PGEMST Trigger: TGTTGACATTTCACCTGGCCATGATTCCCAACAGGG...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGATGCTCCCAAAGCCTGGGGTTTACCACCAAGGGACAACAGACGCTTGGTGATTTCATCCATCTaGTATGCAGAGAACAATGAG | + |
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Preference number: 2 (lower is better) Translates to: SSDAPKAWGLPPRDNRRLVISSI*YAENNE Trigger: CTCATTGTTCTCTGCATATCAGATGGATGAAATCAC...CAAGCGTCTGTTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGCATCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGAGGTGCAATTTCATATaGCAAGCCAAGAATTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: TMWPWQGNLNLTEICLPLRCNFI*QAKNLV Trigger: AACCAAATTCTTGGCTTGTCATATGAAATTGCACCT...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTGCTCAAAGAATCGTCACATGCCAAGGTGTaGGTGACACTGGAGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: STHAQHLMYDFLSVLKESSHAKV*VTLELC Trigger: GCAAAGCTCCAGTGTCACCCACACCTTGGCATGTGA...CGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACACTGGAGCTTTGCCAACAGAGAACAAATAGAGTAGTAATGATTAAAACCCCTCAGCTCTCCCTCTaGGGACAGATTAAGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: VTLELCQQRTNRVVMIKTPQLSL*GQIKVT Trigger: TGTGACCTTAATCTGTCCCCAGAGGGAGAGCTGAGG...GGTTTTAATCATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTGCTCAAAGAATCGATATGCAGAGAACAATaGGCAACTGTGAATTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: STHAQHLMYDFLSVLKESICREQ*ATVNSH Trigger: GTGGGAATTCACAGTTGCTCATTGTTCTCTGCATAT...CGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR TCA 72 bp | GCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTaGGAAGGTGAGGGCTCTGAGGAACTTGGGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ATPPHTAGEACS*EGEGSEELGVW Trigger: CCACACCCCAAGTTCCTCAGAGCCCTCACCTTCTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 72 bp | GCACCTCATGGCAGCCCAAGCCCAAACACTCACCCATaGCACGCCTCCTCACACGGCAGGAGAGGCATGCTC | + |
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Preference number: 3 (lower is better) Translates to: APHGSPSPNTHP*HASSHGRRGML Trigger: GAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTTGGGCTTGGGCTGCCATGAGGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 72 bp | AGGGCTCTGAGGAACTTGGGGTGTGGCTCAGAACCCTaGGCACCACCCCACCCAGAGCAGAGAGGGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: RALRNLGCGSEP*APPHPEQRGRS Trigger: ACTCCTCCCTCTCTGCTCTGGGTGGGGTGGTGCCCAGGGTTCTGAGCCACACCCCAAGTTCCTCAGAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 72 bp | CCTGCCTCTGCCTTCCCGGTGCTGGGATTAGAGGCGTaGAGCACCGTGCCTCCCGGCCTCCAGTTATATTTC | + |
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Preference number: 3 (lower is better) Translates to: PASAFPVLGLEA*STVPPGLQLYF Trigger: GAAATATAACTGGAGGCCGGGAGGCACGGTGCTGCACGCCTCTAATCCCAGCACCGGGAAGGCAGAGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 72 bp | ATCACCCGGGGGAGGACAGGGCCCTTCTCATCAGACTaGAAGCCTGCCGCATGGGACGTGGGTGACAAGACT | + |
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Preference number: 3 (lower is better) Translates to: ITRGRTGPFSSD*KPAAWDVGDKT Trigger: AGTCTTGTCACCCACGTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGGGCCCTGTCCTCCCCCGGGTGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 72 bp | CCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTaGCTCTGCCTTCCCGGTGCTGGGATTAGAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: PGKVTSTSQRSA*LCLPGAGIRGV Trigger: CACGCCTCTAATCCCAGCACCGGGAAGGCAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR GCA 72 bp | GTCAGGTGGTTTGGGAGGGATGCCAACGTTCACACCTaGACCTCATGGCAGCCCAAGCCCAAACACTCACCC | + |
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Preference number: 3 (lower is better) Translates to: VRWFGRDANVHT*TSWQPKPKHSP Trigger: GGGTGAGTGTTTGGGCTTGGGCTGCCATGAGGTGCAGGTGTGAACGTTGGCATCCCTCCCAAACCACCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| 3UTR CCA 72 bp | TTTGGGAGGGATGCCAACGTTCACACCTGCACCTCATaGCAGCCCAAGCCCAAACACTCACCCATGCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: FGRDANVHTCTS*QPKPKHSPMPR Trigger: GCGTGGCATGGGTGAGTGTTTGGGCTTGGGCTGCCATGAGGTGCAGGTGTGAACGTTGGCATCCCTCCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | CTGACAAGGCCAACAAGGGCTTGCACGCTGGTCAGGTaGTTTGGGAGGGATGCCAACGTTCACACCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LTRPTRACTLVR*FGRDANVHTCT Trigger: GGTGCAGGTGTGAACGTTGGCATCCCTCCCAAACCACCTGACCAGCGTGCAAGCCCTTGTTGGCCTTGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR GCA 72 bp | AAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTaGCTTCCCGGTGCTGGGATTAGAGGCGTGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KVTSTSQRSACL*LPGAGIRGVQH Trigger: GTGCTGCACGCCTCTAATCCCAGCACCGGGAAGGCAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | TCAGATCACGTGAGGAAAATGCCCGGAGCCCCAGTGTaGCAAATGAGCCTCTGGCCACATCCTGTGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SDHVRKMPGAPV*QMSLWPHPVSA Trigger: GGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGCATTTTCCTCACGTGATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | AGGCACTTCGGGGTCATGGGCCCCTGTTGGGAATCATaGCCAGGTGAAATGTCAACATTCCACAGAGGACGC | + |
|
Preference number: 3 (lower is better) Translates to: RHFGVMGPCWES*PGEMSTFHRGR Trigger: GCGTCCTCTGTGGAATGTTGACATTTCACCTGGCCATGATTCCCAACAGGGGCCCATGACCCCGAAGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR GCA 72 bp | TACCCAGACAGTGACGGATGCACGTGGAAGCTCAGATaGTCCCAAAGCCTGGGGTTTACCACCAAGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: YPDSDGCTWKLR*SQSLGFTTKGQ Trigger: TTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGCATCTGAGCTTCCACGTGCATCCGTCACTGTCTGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | CCTTCTCATCAGACTGGAAGCCTGCCGCATGGGACGTaGGTGACAAGACTTCTTACCCTAACAGTCACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSHQTGSLPHGT*VTRLLTLTVTV Trigger: CACCGTGACTGTTAGGGTAAGAAGTCTTGTCACCCACGTCCCATGCGGCAGGCTTCCAGTCTGATGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | CCTGTGTCTGCCCCCTTCTGTTGTGAACATGCAGCTTaGGAGTCTTTACCTGGGGACCAGCCCTACCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: PVSAPFCCEHAA*ESLPGDQPYHH Trigger: ATGATGGTAGGGCTGGTCCCCAGGTAAAGACTCTCAAGCTGCATGTTCACAACAGAAGGGGGCAGACACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR GCA 72 bp | CCAGGTGAAATGTCAACATTCCACAGAGGACGCGGATaGTACAGCCAGAGAGTGTCCTTGAGGCATTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PGEMSTFHRGRG*YSQRVSLRHWG Trigger: ACCCCAATGCCTCAAGGACACTCTCTGGCTGTAGCATCCGCGTCCTCTGTGGAATGTTGACATTTCACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | ACAGAGGACGCGGATGCTACAGCCAGAGAGTGTCCTTaGGGCATTGGGGTATTTAACAAAGAGCCTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEDADATARECP*GIGVFNKEPAR Trigger: TCTGGCAGGCTCTTTGTTAAATACCCCAATGCCTCAAGGACACTCTCTGGCTGTAGCATCCGCGTCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | GCTATTGAACACCCCCTCCTAGGGTTGTTCTGTCTGTaGGCTGAAGAAAAGAGGCAGGGCCAAAGTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AIEHPLLGLFCL*AEEKRQGQSHG Trigger: GCCATGACTTTGGCCCTGCCTCTTTTCTTCAGCTCACAGACAGAACAACCCTAGGAGGGGGTGTTCAATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | AACAACAACAACAACCATCCAGGCACTTCGGGGTCATaGGCCCCTGTTGGGAATCATGGCCAGGTGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: NNNNNHPGTSGS*APVGNHGQVKC Trigger: ACATTTCACCTGGCCATGATTCCCAACAGGGGCCCATGACCCCGAAGTGCCTGGATGGTTGTTGTTGTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | GGTAACAGTGGCACGAACTATTCTCTGACTGCAATCTaGTACCCAGACAGTGACGGATGCACGTGGAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GNSGTNYSLTAI*YPDSDGCTWKL Trigger: GAGCTTCCACGTGCATCCGTCACTGTCTGGGTACCAGATTGCAGTCAGAGAATAGTTCGTGCCACTGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | GGCCATGGGGAAGCTGTTAGAAGAACAGCATTACTGTaGCCTCTAAACTCTAAAGAGAAGCAGAGCCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHGEAVRRTALL*PLNSKEKQSRG Trigger: TCCCCGGCTCTGCTTCTCTTTAGAGTTTAGAGGCCACAGTAATGCTGTTCTTCTAACAGCTTCCCCATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | ATCACCAGCCAGTGGGCAGGAAAGCCTCAGAACAAGTaGGCACTGAGTTGCTCTCTCAGCTTAACATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ITSQWAGKPQNK*ALSCSLSLTFI Trigger: GATGAATGTTAAGCTGAGAGAGCAACTCAGTGCTCACTTGTTCTGAGGCTTTCCTGCCCACTGGCTGGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | TTCCTTCTTTCTTCTTCCAGTCAGGAGCTCACAATGTaGCCCTGGCAAGGTAACCTCAACCTCACAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: FLLSSSSQELTM*PWQGNLNLTEI Trigger: GATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGTGAGCTCCTGACTGGAAGAAGAAAGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | GTCATGGCGCTATGTAATATGGCTGATTTGGCATGGTaGTTGTATGTAATACAGGCGGCTTTGCGTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VMALCNMADLAW*LYVIQAALRAG Trigger: GCCAGCACGCAAAGCCGCCTGTATTACATACAACCACCATGCCAAATCAGCCATATTACATAGCGCCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | ACCATCATCCCCAGACCCATTCCTACCGTGGGGAGATaGATAGACACTCCCAGGAAGTCAAATATCCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TIIPRPIPTVGR*IDTPRKSNILS Trigger: TGAAAGGATATTTGACTTCCTGGGAGTGTCTATCCATCTCCCCACGGTAGGAATGGGTCTGGGGATGATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | ATCCTTTCAGTCCACTGTCAACAGAGCAAAACATCATaGGGACCCCTTTCTGCCTGCCTTTCTTCACCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ILSVHCQQSKTS*GPLSACLSSPL Trigger: CAAAGGTGAAGAAAGGCAGGCAGAAAGGGGTCCCCATGATGTTTTGCTCTGTTGACAGTGGACTGAAAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | AACCCTCAAAACAATTTTCACATGCCAAGGTGTGGGTaGCACTGGAGCTTTGCCAACAGAGAACAAATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NPQNNFHMPRCG*HWSFANREQIE Trigger: CTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCACCCACACCTTGGCATGTGAAAATTGTTTTGAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | GAGCAGAGAGGGAGGAGTGTCAAGTATAAGCATGTGTaGTTTCATCCATCTGATATGCAGAGAACAATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EQRGRSVKYKHV*FHPSDMQRTMS Trigger: GCTCATTGTTCTCTGCATATCAGATGGATGAAATCACACATGCTTATACTTGACACTCCTCCCTCTCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR GCA 72 bp | CACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTaGTCAAAGAATCGCCTCCATTTTACTGACAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HMLSILCMISFQ*SKNRLHFTDKA Trigger: GGCCTTGTCAGTAAAATGGAGGCGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CCA 72 bp | ATACTGTCAGGAGAAAGTTGGAGAGATGATGACCTGTaGAGCACACATGCTCAGCATCTTATGTATGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILSGESWRDDDL*STHAQHLMYDF Trigger: GAAATCATACATAAGATGCTGAGCATGTGTGCTCCACAGGTCATCATCTCTCCAACTTTCTCCTGACAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR TCA 72 bp | CCTCCAGTTATATTTCTAAGAGAGGGAACATTCCTATaGGGTGCAATTTCATATGACAAGCCAAGAATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PPVIFLREGTFL*GAISYDKPRIW Trigger: CCAAATTCTTGGCTTGTCATATGAAATTGCACCTCATAGGAATGTTCCCTCTCTTAGAAATATAACTGGAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCAAGCCCCCTTCCCGGTaGCACTGCTGCTTGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARSPSVTNEPLATSCVCPKPPSR*HCCLLR Trigger: TCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTT...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGTGCCCACGAGGAGGGTaGTCAACCGCCGCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHSPMPRLLTRQERHAPECPRGG*STAAGP Trigger: TGGTCCTGCGGCGGTTGAGCACCCTCCTCGTGGGCA...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | GCCCGGAGCCCCAGTGTGACAAATGAGCCTCTGGCCACATCCTGTGTCTGCCCCTCCCGGTGGCACTGCTaGTTGCTGCGATGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARSPSVTNEPLATSCVCPSRWHC*LLRCSC Trigger: ACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGA...GGGGCAGACACAGGATGTGGCCAGAGGCTCATTTGTCACACTGGGGCTCCGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGGCCGCAGGACCAGGCTaGTCTTGCCCGTCAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TMWPWQGNLNLTEICLPLAAGPG*SCPSGG Trigger: ACCACCTGACGGGCAAGACCAGCCTGGTCCTGCGGC...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGAGTGGTGATGGCGGCATaGAGGTGGTGGCCGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPNPIVSLSPASGQESLRVVMAA*RWWPRS Trigger: GGACCGCGGCCACCACCTCCATGCCGCCATCACCAC...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGACGTTGCGCTTGTTGCTaGGGTAGCTCTCGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPNPIVSLSPASGQESLRRCACC*GSSRAA Trigger: CGCTGCCCGAGAGCTACCTCAGCAACAAGCGCAACG...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGTGCTGCTTGCTGCGATaGTCCTGTCTGATGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TMWPWQGNLNLTEICLPLCCLLR*SCLMPS Trigger: GGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCA...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR TCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGTCTCTTCCACAATCATaGGCGCACAGAAGGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHSPMPRLLTRQERHAPESLPQS*AHRRSR Trigger: TCTTGACCTTCTGTGCGCTCATGATTGTGGAAGAGA...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR TCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGACATCCACACCCAGATaGAGGTCAGGAAACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TMWPWQGNLNLTEICLPLTSTPR*RSGNPG Trigger: CCCTGGGTTTCCTGACCTTCATCTGGGTGTGGATGT...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGAGAGATGTCAAAGCCATaGCAGAAGCCCCCTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNPIVSLSPASGQESLREMSKP*QKPPSR Trigger: CCGGGAAGGGGGCTTCTGGCATGGCTTTGACATCTC...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGACAAACCAAACATGGTaGCGAACACTTTCTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KHSPMPRLLTRQERHAPETNQTW*RTLSGS Trigger: TGACCCAGAAAGTGTTCGGCACCATGTTTGGTTTGT...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | GCGGCTTTGCGTGCTGGCTGGCTTCCTGCATCAGAGGGAAACATTTGCTCTCACGTCAAACTACAACTCTaGGGAGGAAGTCCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AALRAGWLPASEGNICSHVKLQL*GGSPGE Trigger: CTCTCCAGGACTTCCTCCCCAGAGTTGTAGTTTGAC...GTGAGAGCAAATGTTTCCCTCTGATGCAGGAAGCCAGCCAGCACGCAAAGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CAA 72 bp | AATCGCCTCCATTTTACTGACAAGGCCAACAAGGGCTaGCACGCTGGTCAGGTGGTTTGGGAGGGATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NRLHFTDKANKG*HAGQVVWEGCQ Trigger: TTGGCATCCCTCCCAAACCACCTGACCAGCGTGCAAGCCCTTGTTGGCCTTGTCAGTAAAATGGAGGCGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGATGCTCCCAAAGCCTGGGGTTTACCACCAAGGGACAACAGACGCTTGTGGAGAAGAGGGCTGTaGAGATATACCAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSDAPKAWGLPPRDNRRLWRRGL*RYTRWL Trigger: CAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCA...CAAGCGTCTGTTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGCATCTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTAGAAGAACAGCATTACTGTGGCCTCTAAACTCTAAAGAGAAGCAGAGCATGGCGGCATGGAGGTaGTGGCCGCGGTCCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AVRRTALLWPLNSKEKQSMAAWR*WPRSVF Trigger: GAAGACGGACCGCGGCCACCACCTCCATGCCGCCAT...GCTCTGCTTCTCTTTAGAGTTTAGAGGCCACAGTAATGCTGTTCTTCTAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR TCA 90 bp | GTGACACTGGAGCTTTGCCAACAGAGAACAAATAGAGTAGTAATGATTAAAACCGCGGGGACAGCTCCTTaGCGACCGAGCCCGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTLELCQQRTNRVVMIKTAGTAP*RPSPPA Trigger: TGCTGGCGGGCTCGGTCGTCAAGGAGCTGTCCCCGC...GGTTTTAATCATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTTAGAAGAACAGCATTACTGTGGCCTCTAAACTCTAAAGAGAAGCAGAGCCGACAACCAGGGTGGTaGTGGCGGCATGGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVRRTALLWPLNSKEKQSRQPGW*WRHGGG Trigger: ACCACCTCCATGCCGCCATCACCACCCTGGTTGTCG...GCTCTGCTTCTCTTTAGAGTTTAGAGGCCACAGTAATGCTGTTCTTCTAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | ACAATGTGGCCCTGGCAAGGTAACCTCAACCTCACAGAGATCTGCCTGCCTCTGCTGGGGAGGAAGTCCTaGAGAGAAAGACTTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TMWPWQGNLNLTEICLPLLGRKS*RERLQI Trigger: TATCTGAAGTCTTTCTCTCCAGGACTTCCTCCCCAG...CAGAGGCAGGCAGATCTCTGTGAGGTTGAGGTTACCTTGCCAGGGCCACATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CAA 72 bp | ATGGCGCTATGTAATATGGCTGATTTGGCATGGTGGTaGTATGTAATACAGGCGGCTTTGCGTGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MALCNMADLAWW*YVIQAALRAGW Trigger: CCAGCCAGCACGCAAAGCCGCCTGTATTACATACAACCACCATGCCAAATCAGCCATATTACATAGCGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | AGCACACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTGCTCAAAGAATCGTATACCAGATGGCTGTaGCCACGAGGAGGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STHAQHLMYDFLSVLKESYTRWL*PRGGCS Trigger: TGAGCACCCTCCTCGTGGGCACAGCCATCTGGTATA...CGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | GTGACACTGGAGCTTTGCCAACAGAGAACAAATAGAGTAGTAATGATTAAAACCTCCGTCTTCACCTCATaGAGCACGGCCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTLELCQQRTNRVVMIKTSVFTS*STAISS Trigger: GGAAGAGATGGCCGTGCTGCATGAGGTGAAGACGGA...GGTTTTAATCATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | AGCACACATGCTCAGCATCTTATGTATGATTTCCTTTCAGTGCTCAAAGAATCGGGGACTGGTAGCAGCTaGCTGTATAGTGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: STHAQHLMYDFLSVLKESGTGSS*LYSAQC Trigger: ACATTGAGCACTATACAGGCAGCTGCTACCAGTCCC...CGATTCTTTGAGCACTGAAAGGAAATCATACATAAGATGCTGAGCATGTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR GCA 90 bp | CAGATAATTCTGTACTGGACAAAGTACGTGGGAATCCTATTAGCCATTGTCCTCGGAAATAAACGGCTGTaGACAGAAACATCCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QIILYWTKYVGILLAIVLGNKRL*TETSTP Trigger: GGGTGTGGATGTTTCTGTGCACAGCCGTTTATTTCC...GAGGACAATGGCTAATAGGATTCCCACGTACTTTGTCCAGTACAGAATTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| 3UTR CAA 72 bp | TCATGGGGACCCCTTTCTGCCTGCCTTTCTTCACCTTaGGTGACAACATCTTACATCTTAAATAGTAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPLSACLSSP*VTTSYILNSNW Trigger: CCAATTACTATTTAAGATGTAAGATGTTGTCACCAAAGGTGAAGAAAGGCAGGCAGAAAGGGGTCCCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
||
| CDS-3UTR CCA 90 bp | GTGACACTGGAGCTTTGCCAACAGAGAACAAATAGAGTAGTAATGATTAAAACCTATAGTGCTCAATGTTaGAGAAGAGGGCTGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTLELCQQRTNRVVMIKTYSAQC*RRGLCR Trigger: TCTGCACAGCCCTCTTCTCCAACATTGAGCACTATA...GGTTTTAATCATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | ACGACCGAGCCCGCCAGCATGGCGGCCACCAGCGCCCAGGGCAGGTaGCGCCGCACCGTCGCCCTCACCAGCGTCCCGCGGAGAAACCAC | + |
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Preference number: 5 (lower is better) Translates to: TTEPASMAATSAQGR*RRTVALTSVPRRNH Trigger: GTGGTTTCTCCGCGGGACGCTGGTGAGGGCGACGGTGCGGCGCCACCTGCCCTGGGCGCTGGTGGCCGCCATGCTGGCGGGCTCGGTCGT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 90 bp | CCCGAGATGTCAAAGCCATGCCAGAAGCCCCCTTCCCGGTGGCACTaGTGCTTGCTGCGATGCTCCTGTCTGATGCCCTCCAGGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: PEMSKPCQKPPSRWH*CLLRCSCLMPSRAG Trigger: CCCGGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGACATCTCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS TCA 90 bp | AGCCCCCTTCCCGGTGGCACTGCTGCTTGCTGCGATGCTCCTGTCTaGTGCCCTCCAGGGCCGGGGACTGGTAGCAGCTGCCTGTATAGT | + |
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Preference number: 5 (lower is better) Translates to: SPLPGGTAACCDAPV*CPPGPGTGSSCLYS Trigger: ACTATACAGGCAGCTGCTACCAGTCCCCGGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | AGGAAACCCAGGGCGACAACCAGGGTGGTGATGGCGGCATGGAGGTaGTGGCCGCGGTCCGTCTTCACCTCATGCAGCACGGCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: RKPRATTRVVMAAWR*WPRSVFTSCSTAIS Trigger: AGAGATGGCCGTGCTGCATGAGGTGAAGACGGACCGCGGCCACCACCTCCATGCCGCCATCACCACCCTGGTTGTCGCCCTGGGTTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | GAGTGGCCCGAGATGTCAAAGCCATGCCAGAAGCCCCCTTCCCGGTaGCACTGCTGCTTGCTGCGATGCTCCTGTCTGATGCCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: EWPEMSKPCQKPPSR*HCCLLRCSCLMPSR Trigger: CCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGACATCTCGGGCCACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS-3UTR CAA 90 bp | AAACACTCACCCATGCCACGCCTCCTCACACGGCAGGAGAGGCATGCTCCTGAGCGGTGGCACTGCTGCTaGCTGCGATGCTCCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: KHSPMPRLLTRQERHAPERWHCC*LRCSCL Trigger: CAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCG...CTCAGGAGCATGCCTCTCCTGCCGTGTGAGGAGGCGTGGCATGGGTGAGTGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 90 bp | GTGATGGCGGCATGGAGGTGGTGGCCGCGGTCCGTCTTCACCTCATaGAGCACGGCCATCTCTTCCACAATCATGAGCGCACAGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: VMAAWRWWPRSVFTS*STAISSTIMSAQKV Trigger: GACCTTCTGTGCGCTCATGATTGTGGAAGAGATGGCCGTGCTGCATGAGGTGAAGACGGACCGCGGCCACCACCTCCATGCCGCCATCAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS-3UTR CAA 90 bp | TCCCCAAACCCTATTGTGTCTCTATCACCAGCCAGTGGGCAGGAAAGCCTCAGAAGCGGGGACAGCTCCTaGACGACCGAGCCCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SPNPIVSLSPASGQESLRSGDSS*TTEPAS Trigger: GCTGGCGGGCTCGGTCGTCAAGGAGCTGTCCCCGCT...TCTGAGGCTTTCCTGCCCACTGGCTGGTGATAGAGACACAATAGGGTTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 90 bp | GCTCAATGTTGGAGAAGAGGGCTGTGCAGATATACCAGATGGCTGTaGCCACGAGGAGGGTGCTCAACCGCCGCAGGACCAGGCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: AQCWRRGLCRYTRWL*PRGGCSTAAGPGWS Trigger: AGACCAGCCTGGTCCTGCGGCGGTTGAGCACCCTCCTCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | TATAGTGCTCAATGTTGGAGAAGAGGGCTGTGCAGATATACCAGATaGCTGTGCCCACGAGGAGGGTGCTCAACCGCCGCAGGACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: YSAQCWRRGLCRYTR*LCPRGGCSTAAGPG Trigger: GCCTGGTCCTGCGGCGGTTGAGCACCCTCCTCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTGAGCACTATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | CCAGGGCCGGGGACTGGTAGCAGCTGCCTGTATAGTGCTCAATGTTaGAGAAGAGGGCTGTGCAGATATACCAGATGGCTGTGCCCACGA | + |
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Preference number: 5 (lower is better) Translates to: PGPGTGSSCLYSAQC*RRGLCRYTRWLCPR Trigger: TCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTGAGCACTATACAGGCAGCTGCTACCAGTCCCCGGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS TCA 90 bp | GGTCCGTCTTCACCTCATGCAGCACGGCCATCTCTTCCACAATCATaGGCGCACAGAAGGTCAAGAGGAAGGAGTGGCCCGAGATGTCAA | + |
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Preference number: 5 (lower is better) Translates to: GPSSPHAARPSLPQS*AHRRSRGRSGPRCQ Trigger: TTGACATCTCGGGCCACTCCTTCCTCTTGACCTTCTGTGCGCTCATGATTGTGGAAGAGATGGCCGTGCTGCATGAGGTGAAGACGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 90 bp | GGTAGCAGCTGCCTGTATAGTGCTCAATGTTGGAGAAGAGGGCTGTaGAGATATACCAGATGGCTGTGCCCACGAGGAGGGTGCTCAACC | + |
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Preference number: 5 (lower is better) Translates to: GSSCLYSAQCWRRGL*RYTRWLCPRGGCST Trigger: GGTTGAGCACCCTCCTCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTGAGCACTATACAGGCAGCTGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 90 bp | ACCAATACCCATATGTTCCGTACCAGCCCAACAAACCAAACATGGTaGCGAACACTTTCTGGGTCAAGTCGTGGAAATAAACGGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TNTHMFRTSPTNQTW*RTLSGSSRGNKRLC Trigger: GCACAGCCGTTTATTTCCACGACTTGACCCAGAAAGTGTTCGGCACCATGTTTGGTTTGTTGGGCTGGTACGGAACATATGGGTATTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 90 bp | AGTATCTCGCTTCAAAGTCAAACTACAACTCTGGGGAGGAAGTCCTaGAGAGAAAGACTTCAGATACCAATACCCATATGTTCCGTACCA | + |
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Preference number: 5 (lower is better) Translates to: SISLQSQTTTLGRKS*RERLQIPIPICSVP Trigger: TGGTACGGAACATATGGGTATTGGTATCTGAAGTCTTTCTCTCCAGGACTTCCTCCCCAGAGTTGTAGTTTGACTTTGAAGCGAGATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS-3UTR CAA 90 bp | GTGACACTGGAGCTTTGCCAACAGAGAACAAATAGAGTAGTAATGATTAAAACCTTAACAAAATACACGTaGAGGACGTTGCGCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VTLELCQQRTNRVVMIKTLTKYT*RTLRLL Trigger: CAACAAGCGCAACGTCCTCAACGTGTATTTTGTTAA...GGTTTTAATCATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS TCA 72 bp | CCCGGTGGCACTGCTGCTTGCTGCGATGCTCCTGTCTaGTGCCCTCCAGGGCCGGGGACTGGTAGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGGTAACCDAPV*CPPGPGTGSSC Trigger: GCAGCTGCTACCAGTCCCCGGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | AAGCCCCCTTCCCGGTGGCACTGCTGCTTGCTGCGATaGTCCTGTCTGATGCCCTCCAGGGCCGGGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: KPPSRWHCCLLR*SCLMPSRAGDW Trigger: CCAGTCCCCGGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CAA 72 bp | CCATGCCAGAAGCCCCCTTCCCGGTGGCACTGCTGCTaGCTGCGATGCTCCTGTCTGATGCCCTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PCQKPPSRWHCC*LRCSCLMPSRA Trigger: GGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CAA 90 bp | ATGTCAAAGCCATGCCAGAAGCCCCCTTCCCGGTGGCACTGCTGCTaGCTGCGATGCTCCTGTCTGATGCCCTCCAGGGCCGGGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: MSKPCQKPPSRWHCC*LRCSCLMPSRAGDW Trigger: CCAGTCCCCGGCCCTGGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGACAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | TCAAAGCCATGCCAGAAGCCCCCTTCCCGGTGGCACTaGTGCTTGCTGCGATGCTCCTGTCTGATGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SKPCQKPPSRWH*CLLRCSCLMPS Trigger: GGAGGGCATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | GTCAAGAGGAAGGAGTGGCCCGAGATGTCAAAGCCATaGCAGAAGCCCCCTTCCCGGTGGCACTGCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VKRKEWPEMSKP*QKPPSRWHCCL Trigger: CAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGACATCTCGGGCCACTCCTTCCTCTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | GCATGGAGGTGGTGGCCGCGGTCCGTCTTCACCTCATaGAGCACGGCCATCTCTTCCACAATCATGAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: AWRWWPRSVFTS*STAISSTIMSA Trigger: TGCGCTCATGATTGTGGAAGAGATGGCCGTGCTGCATGAGGTGAAGACGGACCGCGGCCACCACCTCCATGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 72 bp | GAGATGTCAAAGCCATGCCAGAAGCCCCCTTCCCGGTaGCACTGCTGCTTGCTGCGATGCTCCTGTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: EMSKPCQKPPSR*HCCLLRCSCLM Trigger: CATCAGACAGGAGCATCGCAGCAAGCAGCAGTGCCACCGGGAAGGGGGCTTCTGGCATGGCTTTGACATCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS CCA 72 bp | CAATGTTGGAGAAGAGGGCTGTGCAGATATACCAGATaGCTGTGCCCACGAGGAGGGTGCTCAACCGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: QCWRRGLCRYTR*LCPRGGCSTAA Trigger: TGCGGCGGTTGAGCACCCTCCTCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | TGCCTGTATAGTGCTCAATGTTGGAGAAGAGGGCTGTaGAGATATACCAGATGGCTGTGCCCACGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CLYSAQCWRRGL*RYTRWLCPRGG Trigger: CCCTCCTCGTGGGCACAGCCATCTGGTATATCTGCACAGCCCTCTTCTCCAACATTGAGCACTATACAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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| CDS GCA 72 bp | CATATGTTCCGTACCAGCCCAACAAACCAAACATGGTaGCGAACACTTTCTGGGTCAAGTCGTGGAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: HMFRTSPTNQTW*RTLSGSSRGNK Trigger: TTTATTTCCACGACTTGACCCAGAAAGTGTTCGGCACCATGTTTGGTTTGTTGGGCTGGTACGGAACATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109418.2 |
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