Pregenerated sensors for FITM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022215

Ensembl transcript IDs: ENSMUST00000022826.7

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGACAGTGTAGCCCCTCCACTGGTGGCCGGCTGCCAGGCAACTCTTaGGGTCGGGCAGCTCATGCAGCAATAGGCCCTGGGGCAGAGGCT	+
Preference number: 5 (lower is better) Translates to: RQCSPSTGGRLPGNS*GRAAHAAIGPGAEA Trigger: AGCCTCTGCCCCAGGGCCTATTGCTGCATGAGCTGCCCGACCGCAAGAGTTGCCTGGCAGCCGGCCACCAGTGGAGGGGCTACACTGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CCA 90 bp	GCCAGGCAACTCTTGCGGTCGGGCAGCTCATGCAGCAATAGGCCCTaGGGCAGAGGCTCGAAGCAGGAACCCGTCAGGTCCTCGATGAGT	+
Preference number: 5 (lower is better) Translates to: ARQLLRSGSSCSNRP*GRGSKQEPVRSSMS Trigger: ACTCATCGAGGACCTGACGGGTTCCTGCTTCGAGCCTCTGCCCCAGGGCCTATTGCTGCATGAGCTGCCCGACCGCAAGAGTTGCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 90 bp	TACAGCTGCCCCCACCACCAGTCGGCTCAGGTGCCTGGCAGTCACTaGTACACGTCGTGTAGCCAGGAACACCACCAGCAGCACAAAGCC	+
Preference number: 5 (lower is better) Translates to: YSCPHHQSAQVPGSH*YTSCSQEHHQQHKA Trigger: GGCTTTGTGCTGCTGGTGGTGTTCCTGGCTACACGACGTGTAGCAGTGACTGCCAGGCACCTGAGCCGACTGGTGGTGGGGGCAGCTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CCA 90 bp	TTGAGTAGGAAAACAAGACGCAGTGGGGCGCCAGCTGGTAGCCCATaGGCCAGGTACTTGGCAAACACAGCGGCTTCCTCAGCCATGAGG	+
Preference number: 5 (lower is better) Translates to: LSRKTRRSGAPAGSP*ARYLANTAASSAMR Trigger: CCTCATGGCTGAGGAAGCCGCTGTGTTTGCCAAGTACCTGGCCCATGGGCTACCAGCTGGCGCCCCACTGCGTCTTGTTTTCCTACTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS TCA 90 bp	TTGAAGAAGTTGCCGTGGCTAGCGAAGATCGTCCGAGAGTTAACGTaGAACTGCAGAAGGGGCCCAAAGATGACCACTGCTGCCAACCAA	+
Preference number: 5 (lower is better) Translates to: LKKLPWLAKIVRELT*NCRRGPKMTTAANQ Trigger: TTGGTTGGCAGCAGTGGTCATCTTTGGGCCCCTTCTGCAGTTTCACGTTAACTCTCGGACGATCTTCGCTAGCCACGGCAACTTCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 90 bp	ATGGTACCAGCTGCCATAGGTAAGGTACCAGGCAAACGTGCCTACTaGCGCACCCACCACCTTGTGGGTATATTGATGGAAATAGATGAC	+
Preference number: 5 (lower is better) Translates to: MVPAAIGKVPGKRAY*RTHHLVGILMEIDD Trigger: GTCATCTATTTCCATCAATATACCCACAAGGTGGTGGGTGCGGCAGTAGGCACGTTTGCCTGGTACCTTACCTATGGCAGCTGGTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 72 bp	GGAGGAGACAGTGTAGCCCCTCCACTGGTGGCCGGCTaGCAGGCAACTCTTGCGGTCGGGCAGCTCATGCAG	+
Preference number: 6 (lower is better) Translates to: GGDSVAPPLVAG*QATLAVGQLMQ Trigger: CTGCATGAGCTGCCCGACCGCAAGAGTTGCCTGGCAGCCGGCCACCAGTGGAGGGGCTACACTGTCTCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 72 bp	CGCCATACAGCTGCCCCCACCACCAGTCGGCTCAGGTaGCTGGCAGTCACTGCTACACGTCGTGTAGCCAGG	+
Preference number: 6 (lower is better) Translates to: RHTAAPTTSRLR*LAVTATRRVAR Trigger: CCTGGCTACACGACGTGTAGCAGTGACTGCCAGGCACCTGAGCCGACTGGTGGTGGGGGCAGCTGTATGGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CCA 72 bp	CTCTTGCGGTCGGGCAGCTCATGCAGCAATAGGCCCTaGGGCAGAGGCTCGAAGCAGGAACCCGTCAGGTCC	+
Preference number: 6 (lower is better) Translates to: LLRSGSSCSNRP*GRGSKQEPVRS Trigger: GGACCTGACGGGTTCCTGCTTCGAGCCTCTGCCCCAGGGCCTATTGCTGCATGAGCTGCCCGACCGCAAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 72 bp	CCCCACCACCAGTCGGCTCAGGTGCCTGGCAGTCACTaGTACACGTCGTGTAGCCAGGAACACCACCAGCAG	+
Preference number: 6 (lower is better) Translates to: PHHQSAQVPGSH*YTSCSQEHHQQ Trigger: CTGCTGGTGGTGTTCCTGGCTACACGACGTGTAGCAGTGACTGCCAGGCACCTGAGCCGACTGGTGGTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CAA 90 bp	ACAAGACGCAGTGGGGCGCCAGCTGGTAGCCCATGGGCCAGGTACTaGGCAAACACAGCGGCTTCCTCAGCCATGAGGAGGCAGCAGAAG	+
Preference number: 6 (lower is better) Translates to: TRRSGAPAGSPWARY*ANTAASSAMRRQQK Trigger: CTTCTGCTGCCTCCTCATGGCTGAGGAAGCCGCTGTGTTTGCCAAGTACCTGGCCCATGGGCTACCAGCTGGCGCCCCACTGCGTCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS TCA 72 bp	AGTACAGTAAGGCAGAGGCCACCCAGAGCAGCACCTTaGCCAGGCATCCCAGCAGTGCTCGGACTCGGGTCC	+
Preference number: 6 (lower is better) Translates to: STVRQRPPRAAP*PGIPAVLGLGS Trigger: GGACCCGAGTCCGAGCACTGCTGGGATGCCTGGTCAAGGTGCTGCTCTGGGTGGCCTCTGCCTTACTGTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 72 bp	CCAACCAAGCATGGTAGAGGCGCCGTAAGCAAGGGCTaGCCAGGAGGCGGGCGGCTTGTTCACTTCCAAAGT	+
Preference number: 6 (lower is better) Translates to: PTKHGRGAVSKG*PGGGRLVHFQS Trigger: ACTTTGGAAGTGAACAAGCCGCCCGCCTCCTGGGCAGCCCTTGCTTACGGCGCCTCTACCATGCTTGGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS TCA 72 bp	GCAGCAGGAAGTTCCAGAGGCCCAGCAGCAGCACATTaGGTAGGAAAACAAGACGCAGTGGGGCGCCAGCTG	+
Preference number: 6 (lower is better) Translates to: AAGSSRGPAAAH*VGKQDAVGRQL Trigger: CAGCTGGCGCCCCACTGCGTCTTGTTTTCCTACTCAATGTGCTGCTGCTGGGCCTCTGGAACTTCCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CCA 72 bp	AAAACAAGACGCAGTGGGGCGCCAGCTGGTAGCCCATaGGCCAGGTACTTGGCAAACACAGCGGCTTCCTCA	+
Preference number: 6 (lower is better) Translates to: KTRRSGAPAGSP*ARYLANTAASS Trigger: TGAGGAAGCCGCTGTGTTTGCCAAGTACCTGGCCCATGGGCTACCAGCTGGCGCCCCACTGCGTCTTGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS CAA 90 bp	CCAGGCAAACGTGCCTACTGCCGCACCCACCACCTTGTGGGTATATaGATGGAAATAGATGACCGTGCAGAGCAGCAGGAAGTTCCAGAG	+
Preference number: 6 (lower is better) Translates to: PGKRAYCRTHHLVGI*MEIDDRAEQQEVPE Trigger: CTCTGGAACTTCCTGCTGCTCTGCACGGTCATCTATTTCCATCAATATACCCACAAGGTGGTGGGTGCGGCAGTAGGCACGTTTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS TCA 72 bp	TTGCCGTGGCTAGCGAAGATCGTCCGAGAGTTAACGTaGAACTGCAGAAGGGGCCCAAAGATGACCACTGCT	+
Preference number: 6 (lower is better) Translates to: LPWLAKIVRELT*NCRRGPKMTTA Trigger: AGCAGTGGTCATCTTTGGGCCCCTTCTGCAGTTTCACGTTAACTCTCGGACGATCTTCGCTAGCCACGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022826.7
CDS GCA 72 bp	GCTGCCATAGGTAAGGTACCAGGCAAACGTGCCTACTaGCGCACCCACCACCTTGTGGGTATATTGATGGAA	+
Preference number: 6 (lower is better) Translates to: AAIGKVPGKRAY*RTHHLVGILME Trigger: TTCCATCAATATACCCACAAGGTGGTGGGTGCGGCAGTAGGCACGTTTGCCTGGTACCTTACCTATGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022826.7