Pregenerated sensors for FIS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019054Ensembl transcript IDs: ENSMUST00000019198.7, ENSMUST00000111094.8, ENSMUST00000111097.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGTAGACTACAGGGGTaGAGGAGAAAAGGGAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: PILFTLIAKHDRVKRQVQGRLQG*RRKGKA Trigger: CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGGGCGTTCCAGCTCCTTaGCCTGGTTGTTCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRGVPAP*PGCSGA Trigger: AGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCC...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | GACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCATGGAGACTGTTGGCCTGGTTGTTCTaGGGCTCAGTCTGCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: DRVKRQVQGLRGWGSWRLLAWLF*GSVCNS Trigger: GCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAA...CAGTCTCCATGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCATCCAGCTCCTTGGCCTaGTTGTTCTGGGGCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSSSSLA*LFWGSV Trigger: GACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGA...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGTCCAGCTCCTTGGCCTaGTTGTTCTGGGGCTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRSSSLA*LFWGSV Trigger: GACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGA...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | ATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGGGCGTTCCAGCTCCTTaGCCTGGTTGTTCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IAKHDRVKRQVQGLRGWGGVPAP*PGCSGA Trigger: AGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCC...CCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAAT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGCCCGCTGTTCCTCTTTaGTCCCTTTGGGCAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRPAVPL*SLWATA Trigger: AGCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGG...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR GCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGTTCTGGGGCTCAGTCTaGAACAGCCCTCGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRFWGSV*NSPRTY Trigger: GTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAA...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCATTCTGGGGCTCAGTCTaGAACAGCCCTCGCACATAC | + |
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Preference number: 4 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSFWGSV*NSPRTY Trigger: GTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAA...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCACCTCTTTGCTCCCTTTaGGCAACAGCTCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSPLCSL*ATAPPA Trigger: TGCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGG...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | ATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCCAGCTCCTTGGCCTaGTTGTTCTGGGGCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IAKHDRVKRQVQGLRGWGSSSLA*LFWGSV Trigger: GACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGA...CCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGAGGCGTTCCAGCTCCTTaGCCTGGTTGTTCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRGVPAP*PGCSGA Trigger: AGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCC...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGCCTCTTTGCTCCCTTTaGGCAACAGCTCCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRPLCSL*ATAPCS Trigger: GCTGCAAGGAGCTGTTGCCCAAAGGGAGCAAAGAGG...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111097.8 |
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| CDS-3UTR GCA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGTTCTGGGGCTCAGTCTaGAACAGCCCTCGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRFWGSV*NSPRTY Trigger: GTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAA...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | GGTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGCCATGCCACCAACGATaGCCATGCCTACCAGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GHGDCRGRLQGCRRKGKAPCHQR*PCLPVH Trigger: ATGGACTGGTAGGCATGGCCATCGTTGGTGGCATGG...CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGCCATGCCACCAACGATaGCCATGCCTACCAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRPCHQR*PCLPVH Trigger: ATGGACTGGTAGGCATGGCCATCGTTGGTGGCATGG...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR GCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGGCAACAGCTCCTTaGAGCTTCGTCTCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRWATAP*SFVSGH Trigger: ATGCCCAGAGACGAAGCTGCAAGGAGCTGTTGCCCA...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111097.8 |
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| CDS-3UTR CCA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGCAAATTGCGTGCTCTTaGACACAGAACCAGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRQIACS*TQNQLP Trigger: AGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTG...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGGCAGCACGATGCCTCTaGGGATGTCCTCATTGTATT | + |
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Preference number: 4 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRAARCL*GCPHCI Trigger: AATACAATGAGGACATCCGCAGAGGCATCGTGCTGC...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GGTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGGGACACAGAACCAGCTaGCTGCTCAGACTGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GHGDCRGRLQGCRRKGKAGHRTS*LLRLKF Trigger: AAATTTCAGTCTGAGCAGGCAGCTGGTTCTGTGTCC...CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCATGGAGACTGCAGGCATATTCAAATTaGGTGCTCTTGGACACAGAA | + |
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Preference number: 4 (lower is better) Translates to: DRVKRQVQGLRGWGSWRLQAYSN*VLLDTE Trigger: TTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTG...CAGTCTCCATGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGAGCAGCACGATGCCTCTaGGGATGTCCTCATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRAARCL*GCPHCI Trigger: AATACAATGAGGACATCCGCAGAGGCATCGTGCTGC...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCACCTTTCAAAATTCCTTaGAGCTTCGTCTCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSPFKIP*SFVSGH Trigger: ATGCCCAGAGACGAAGCTGCAAGGAATTTTGAAAGG...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGACAAATTGCGTGCTCTTaGACACAGAACCAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRQIACS*TQNQLP Trigger: AGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTG...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGAGGACACAGAACCAGCTaGCTGCTCAGACTGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRGHRTS*LLRLKF Trigger: AAATTTCAGTCTGAGCAGGCAGCTGGTTCTGTGTCC...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR TCA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGGCTGCCTGCTCAGACTaGAATTTCCTTTCAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRAACSD*NFLSKF Trigger: GAATTTTGAAAGGAAATTTCAGTCTGAGCAGGCAGC...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR TCA 90 bp | GTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGAGCTGCCTGCTCAGACTaGAATTTCCTTTCAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: VMETVEVDYRGAGEKGRRAACSD*NFLSKF Trigger: GAATTTTGAAAGGAAATTTCAGTCTGAGCAGGCAGC...TCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGCCTCCAGCAGCACGATaGCTCTGCGGATGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PILFTLIAKHDRVKRQVQPPAAR*LCGCPH Trigger: ATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGG...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CCA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGCCTCTTTGCTCCCTTTaGGCAACAGCTCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PILFTLIAKHDRVKRQVQPLCSL*ATAPPA Trigger: TGCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGG...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGTGTCCTCATTGTATTTaGTTCGAACCAGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: PILFTLIAKHDRVKRQVQCPHCI*FEPGTR Trigger: CCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACA...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR GCA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGCAGGCATATTCAAATTaGGTGCTCTTGGACACAGAA | + |
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Preference number: 4 (lower is better) Translates to: PILFTLIAKHDRVKRQVQQAYSN*VLLDTE Trigger: TTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTG...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 90 bp | GGATTTGGACTTGGAGACAGCCAGTCCAATGAGTCCAGCCAGGCCTaGCACGCCCAGGGCCATGCCACCAACGATGGCCATGCCTACCAG | + |
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Preference number: 5 (lower is better) Translates to: GFGLGDSQSNESSQA*HAQGHATNDGHAYQ Trigger: CTGGTAGGCATGGCCATCGTTGGTGGCATGGCCCTGGGCGTGGCAGGCCTGGCTGGACTCATTGGACTGGCTGTCTCCAAGTCCAAATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGAGGCGTTCCAGCTCCTaGGCCTGGTTGTTCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRRRSSS*AWLFWG Trigger: GCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCT...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS GCA 90 bp | AGTTGCCCACGGCCAGGTAGAAGACATAGTCCCGCTGTTCCTCTTTaGTCCCTTTGGGCAACAGCTCCTCCAGCAGCACGATGCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SCPRPGRRHSPAVPL*SLWATAPPAARCLC Trigger: GCAGAGGCATCGTGCTGCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGACTATGTCTTCTACCTGGCCGTGGGCAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GGTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGAGGCGTTCCAGCTCCTaGGCCTGGTTGTTCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GHGDCRGRLQGCRRKGKARRSSS*AWLFWG Trigger: GCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCT...CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGTCCTCTTTGCTCCCTTaGGGCAACAGCTCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRSSLLP*GNSSSS Trigger: GCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGA...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCATCCCGCTGTTCCTCTTaGCTCCCTTTGGGCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSSRCSS*LPLGNS Trigger: GCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGA...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 90 bp | AGTTGCCCACGGCCAGGTAGAAGACATAGTCCCGCTGTTCCTCTTTaGTCCCTTTGGGCAACAGCTCCTTGCAGCTTCGTCTCTGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SCPRPGRRHSPAVPL*SLWATAPCSFVSGH Trigger: ATGCCCAGAGACGAAGCTGCAAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGACTATGTCTTCTACCTGGCCGTGGGCAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | GGTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGTCCTCTTTGCTCCCTTaGGGCAACAGCTCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GHGDCRGRLQGCRRKGKASSLLP*GNSSSS Trigger: GCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGA...CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | ATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCCCGCTGTTCCTCTTaGCTCCCTTTGGGCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: IAKHDRVKRQVQGLRGWGSRCSS*LPLGNS Trigger: GCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGA...CCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGTCCCGCTGTTCCTCTTaGCTCCCTTTGGGCAACAGC | + |
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Preference number: 5 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRSRCSS*LPLGNS Trigger: GCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGA...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | GGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGATGGACAGGTCCTCTTTGCTCCCTTaGGGCAACAGCTCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GRLQGCRRKGKAMVRMDRSSLLP*GNSSLQ Trigger: CTGCAAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGA...CCTGTCCATCCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111097.8 |
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| CDS GCA 90 bp | CTTTGCTCCCTTTGGGCAACAGCTCCTCCAGCAGCACGATGCCTCTaGGGATGTCCTCATTGTATTTGCTTCGAACCAGGCACCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LCSLWATAPPAARCL*GCPHCICFEPGTRH Trigger: ATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 90 bp | GTCCATCTTTCTTCATGGCCTTATCAATCAGGCGTTCCAGCTCCTTaGCCTGGTTGTTCTGGGGCTCAGTCTGCAACAGCCCTCGCACAT | + |
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Preference number: 5 (lower is better) Translates to: VHLSSWPYQSGVPAP*PGCSGAQSATALAH Trigger: ATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGATTGATAAGGCCATGAAGAAAGATGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | ATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCAAATTGCGTGCTCTaGGACACAGAACCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: IAKHDRVKRQVQGLRGWGSNCVL*DTEPAA Trigger: GGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGA...CCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCACTGCGGATGTCCTCATaGTATTTGCTTCGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSLRMSS*YLLRTR Trigger: CCTGGTTCGAAGCAAATACAATGAGGACATCCGCAG...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 90 bp | GCTCCTCCAGCAGCACGATGCCTCTGCGGATGTCCTCATTGTATTTaGTTCGAACCAGGCACCAGGCATATTCAAATTGCGTGCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: APPAARCLCGCPHCI*FEPGTRHIQIACSW Trigger: CCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 90 bp | ATGGCCTTATCAATCAGGCGTTCCAGCTCCTTGGCCTGGTTGTTCTaGGGCTCAGTCTGCAACAGCCCTCGCACATACTTTAGAGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: MALSIRRSSSLAWLF*GSVCNSPRTYFRAF Trigger: AAAGGCTCTAAAGTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGATTGATAAGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGTCAATGTCCTCATTGTATTaGCTTCGAACCAGGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: AKHDRVKRQVQGLRGWGSMSSLY*LRTRHQ Trigger: CTGGTGCCTGGTTCGAAGCAAATACAATGAGGACAT...TGACCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGGTGAGGCTGCGGATGTCCTCATaGTATTTGCTTCGAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: DCRGRLQGCRRKGKAMVRLRMSS*YLLRTR Trigger: CCTGGTTCGAAGCAAATACAATGAGGACATCCGCAG...CCTCACCATCGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS TCA 90 bp | TCTGCAACAGCCCTCGCACATACTTTAGAGCCTTTTCATATTCCTTaGGCCGGTAGTTGCCCACGGCCAGGTAGAAGACATAGTCCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SATALAHTLEPFHIP*AGSCPRPGRRHSPA Trigger: AGCGGGACTATGTCTTCTACCTGGCCGTGGGCAACTACCGGCTCAAGGAATATGAAAAGGCTCTAAAGTATGTGCGAGGGCTGTTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS GCA 90 bp | ATCAGGCGTTCCAGCTCCTTGGCCTGGTTGTTCTGGGGCTCAGTCTaGAACAGCCCTCGCACATACTTTAGAGCCTTTTCATATTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: IRRSSSLAWLFWGSV*NSPRTYFRAFSYSL Trigger: CAAGGAATATGAAAAGGCTCTAAAGTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS-3UTR CAA 90 bp | ATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGGGGCTAAGAGGCTGGGGGCCAGGCATATTCAAATaGCGTGCTCTTGGACACAGA | + |
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Preference number: 5 (lower is better) Translates to: IAKHDRVKRQVQGLRGWGPGIFK*RALGHR Trigger: TCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGG...CCCCCAGCCTCTTAGCCCCTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | GGTCATGGAGACTGTAGAGGTAGACTACAGGGGTGCAGGAGAAAAGGGAAGGCGATGTCCTCATTGTATTaGCTTCGAACCAGGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: GHGDCRGRLQGCRRKGKAMSSLY*LRTRHQ Trigger: CTGGTGCCTGGTTCGAAGCAAATACAATGAGGACAT...CGCCTTCCCTTTTCTCCTGCACCCCTGTAGTCTACCTCTACAGTCTCCATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 90 bp | CATTGTATTTGCTTCGAACCAGGCACCAGGCATATTCAAATTGCGTaGTCTTGGACACAGAACCAGCTGCCTGCTCAGACTGAAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: HCICFEPGTRHIQIA*SWTQNQLPAQTEIS Trigger: GGAAATTTCAGTCTGAGCAGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 90 bp | ATTTGCTTCGAACCAGGCACCAGGCATATTCAAATTGCGTGCTCTTaGACACAGAACCAGCTGCCTGCTCAGACTGAAATTTCCTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: ICFEPGTRHIQIACS*TQNQLPAQTEISFQ Trigger: TTGAAAGGAAATTTCAGTCTGAGCAGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS-3UTR CAA 90 bp | CCAATTTTATTTACACTCATTGCAAAGCATGACAGGGTTAAACGACAGGTGCAGCCAGGCATATTCAAATaGCGTGCTCTTGGACACAGA | + |
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Preference number: 5 (lower is better) Translates to: PILFTLIAKHDRVKRQVQPGIFK*RALGHR Trigger: TCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGG...CTGCACCTGTCGTTTAACCCTGTCATGCTTTGCAATGAGTGTAAATAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 72 bp | CCAGGCCTGCCACGCCCAGGGCCATGCCACCAACGATaGCCATGCCTACCAGTCCATCTTTCTTCATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGLPRPGPCHQR*PCLPVHLSSWP Trigger: AGGCCATGAAGAAAGATGGACTGGTAGGCATGGCCATCGTTGGTGGCATGGCCCTGGGCGTGGCAGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS GCA 72 bp | CGGCCAGGTAGAAGACATAGTCCCGCTGTTCCTCTTTaGTCCCTTTGGGCAACAGCTCCTCCAGCAGCACGA | + |
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Preference number: 6 (lower is better) Translates to: RPGRRHSPAVPL*SLWATAPPAAR Trigger: TCGTGCTGCTGGAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGACTATGTCTTCTACCTGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 72 bp | CGGCCAGGTAGAAGACATAGTCCCGCTGTTCCTCTTTaGTCCCTTTGGGCAACAGCTCCTTGCAGCTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: RPGRRHSPAVPL*SLWATAPCSFV Trigger: GACGAAGCTGCAAGGAGCTGTTGCCCAAAGGGAGCAAAGAGGAACAGCGGGACTATGTCTTCTACCTGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111097.8 |
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| CDS GCA 72 bp | CTTTGGGCAACAGCTCCTCCAGCAGCACGATGCCTCTaGGGATGTCCTCATTGTATTTGCTTCGAACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWATAPPAARCL*GCPHCICFEPG Trigger: GCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGCTGTTGCCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 72 bp | TCAATCAGGCGTTCCAGCTCCTTGGCCTGGTTGTTCTaGGGCTCAGTCTGCAACAGCCCTCGCACATACTTT | + |
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Preference number: 6 (lower is better) Translates to: SIRRSSSLAWLF*GSVCNSPRTYF Trigger: AAAGTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS CAA 90 bp | AGTCCATCTTTCTTCATGGCCTTATCAATCAGGCGTTCCAGCTCCTaGGCCTGGTTGTTCTGGGGCTCAGTCTGCAACAGCCCTCGCACA | + |
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Preference number: 6 (lower is better) Translates to: SPSFFMALSIRRSSS*AWLFWGSVCNSPRT Trigger: TGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGATTGATAAGGCCATGAAGAAAGATGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS GCA 72 bp | TGCTCCCTTTGGGCAACAGCTCCTCCAGCAGCACGATaGCTCTGCGGATGTCCTCATTGTATTTGCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: CSLWATAPPAAR*LCGCPHCICFE Trigger: TTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGCTGTTGCCCAAAGGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 72 bp | TCCAGCTCCTTGGCCTGGTTGTTCTGGGGCTCAGTCTaGAACAGCCCTCGCACATACTTTAGAGCCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSLAWLFWGSV*NSPRTYFRAFS Trigger: TGAAAAGGCTCTAAAGTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS CAA 90 bp | GGCAACAGCTCCTCCAGCAGCACGATGCCTCTGCGGATGTCCTCATaGTATTTGCTTCGAACCAGGCACCAGGCATATTCAAATTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GNSSSSSTMPLRMSS*YLLRTRHQAYSNCV Trigger: CACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGCTGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 72 bp | TGCTTCGAACCAGGCACCAGGCATATTCAAATTGCGTaGTCTTGGACACAGAACCAGCTGCCTGCTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: CFEPGTRHIQIA*SWTQNQLPAQT Trigger: AGTCTGAGCAGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CAA 90 bp | AGCTCCTCCAGCAGCACGATGCCTCTGCGGATGTCCTCATTGTATTaGCTTCGAACCAGGCACCAGGCATATTCAAATTGCGTGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSSTMPLRMSSLY*LRTRHQAYSNCVLL Trigger: CAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCTGGAGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CAA 90 bp | TTCTTCATGGCCTTATCAATCAGGCGTTCCAGCTCCTTGGCCTGGTaGTTCTGGGGCTCAGTCTGCAACAGCCCTCGCACATACTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: FFMALSIRRSSSLAW*FWGSVCNSPRTYFR Trigger: TCTAAAGTATGTGCGAGGGCTGTTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGATTGATAAGGCCATGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS TCA 72 bp | GCCCTCGCACATACTTTAGAGCCTTTTCATATTCCTTaGGCCGGTAGTTGCCCACGGCCAGGTAGAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: ALAHTLEPFHIP*AGSCPRPGRRH Trigger: ATGTCTTCTACCTGGCCGTGGGCAACTACCGGCTCAAGGAATATGAAAAGGCTCTAAAGTATGTGCGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 ENSMUST00000111097.8 |
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| CDS GCA 72 bp | GCAGCACGATGCCTCTGCGGATGTCCTCATTGTATTTaGTTCGAACCAGGCACCAGGCATATTCAAATTGCG | + |
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Preference number: 6 (lower is better) Translates to: AARCLCGCPHCI*FEPGTRHIQIA Trigger: CGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS GCA 72 bp | TATTTGCTTCGAACCAGGCACCAGGCATATTCAAATTaGGTGCTCTTGGACACAGAACCAGCTGCCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: YLLRTRHQAYSN*VLLDTEPAACS Trigger: TGAGCAGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CCA 72 bp | GAACCAGGCACCAGGCATATTCAAATTGCGTGCTCTTaGACACAGAACCAGCTGCCTGCTCAGACTGAAATT | + |
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Preference number: 6 (lower is better) Translates to: EPGTRHIQIACS*TQNQLPAQTEI Trigger: AATTTCAGTCTGAGCAGGCAGCTGGTTCTGTGTCCAAGAGCACGCAATTTGAATATGCCTGGTGCCTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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| CDS CAA 72 bp | AGCAGCACGATGCCTCTGCGGATGTCCTCATTGTATTaGCTTCGAACCAGGCACCAGGCATATTCAAATTGC | + |
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Preference number: 6 (lower is better) Translates to: SSTMPLRMSSLY*LRTRHQAYSNC Trigger: GCAATTTGAATATGCCTGGTGCCTGGTTCGAAGCAAATACAATGAGGACATCCGCAGAGGCATCGTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019198.7 ENSMUST00000111094.8 |
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