RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FILIP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034898

Ensembl transcript IDs: ENSMUST00000093811.11, ENSMUST00000172973.2, ENSMUST00000239133.2

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTaGCTGGGGCCACATGCTAGAAGTAAAACTGAACTGGAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: LSHEDTEGFITRELH*LGPHARSKTELEAR
Trigger: TCTGGCCTCCAGTTCAGTTTTACTTCTAGCATGTGGCCCCAGCCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CCA 90 bp TTACAATTAGAAGAACTGGGAGCCAGTCTTTGGAAGCATGGAACGTaGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACT +
Preference number: 1 (lower is better)
Translates to: LQLEELGASLWKHGT*SPNLSHEDTEGFIT
Trigger: AGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCCAAAGACTGGCTCCCAGTTCTTCTAATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CCA 90 bp TCTATTAAACTTGGCTTACAATTAGAAGAACTGGGAGCCAGTCTTTaGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACT +
Preference number: 1 (lower is better)
Translates to: SIKLGLQLEELGASL*KHGTWSPNLSHEDT
Trigger: AGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCCAAAGACTGGCTCCCAGTTCTTCTAATTGTAAGCCAAGTTTAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CCA 72 bp GAAGAACTGGGAGCCAGTCTTTGGAAGCATGGAACGTaGTCCCCAAATCTCTCTCATGAAGATACTGAGGGC +
Preference number: 3 (lower is better)
Translates to: EELGASLWKHGT*SPNLSHEDTEG
Trigger: GCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCCAAAGACTGGCTCCCAGTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CCA 72 bp GAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTaGCTGGGGCCACATGCTAGAAGTAAAACTGAACTG +
Preference number: 3 (lower is better)
Translates to: EDTEGFITRELH*LGPHARSKTEL
Trigger: CAGTTCAGTTTTACTTCTAGCATGTGGCCCCAGCCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CCA 72 bp CTTGGCTTACAATTAGAAGAACTGGGAGCCAGTCTTTaGAAGCATGGAACGTGGTCCCCAAATCTCTCTCAT +
Preference number: 3 (lower is better)
Translates to: LGLQLEELGASL*KHGTWSPNLSH
Trigger: ATGAGAGAGATTTGGGGACCACGTTCCATGCTTCCAAAGACTGGCTCCCAGTTCTTCTAATTGTAAGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCCGACTTGCTGCGGCTaGAGGCCTCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAPTCCG*RPPPAS
Trigger: AGAAGCTGGAGGAGGCCTTCAGCCGCAGCAAGTCGG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCACCAGCTCGCCAGGGTaGCCTGTACCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATATSSPG*PVPWFG
Trigger: GCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGGT...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTAGGGCTGGCCCTGCTTaGGTGCTAGGACCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCARAGPA*VLGPAR
Trigger: GCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCCGACTTGCTGCGGCTaGAGGCCTCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCPTCCG*RPPPAS
Trigger: AGAAGCTGGAGGAGGCCTTCAGCCGCAGCAAGTCGG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCATTTCCACTCGGCCTaGGAGCTCGGCTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAHFHSA*ELGCSA
Trigger: AGCGCTACAGCCGAGCTCTCAGGCCGAGTGGAAATG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGGATGCAGGCCTGTCTaGAAACGCGCCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCGCRPV*KRAPST
Trigger: GGTGGAAGGGGCGCGTTTGCAGACAGGCCTGCATCC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCTGGGCCCTTTCTCCTaGGGAGCTGAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATALGPFS*GAEGPF
Trigger: AAACGGACCCTCAGCTCCCCAGGAGAAAGGGCCCAG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTAGGTCCTGGACTTTCTaGCTCTGCAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCRSWTF*LCRPSC
Trigger: GCAGCTGGGCCTGCAGAGTCAGAAAGTCCAGGACCT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTGTCTTCCGGGCAGGTaGACTCAGACCCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATACLPGR*TQTPCT
Trigger: TGTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCAGATGTGGGGCTTGTaGTCTCCAGGGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAQMWGL*SPGWQC
Trigger: GCACTGCCACCCTGGAGATCACAAGCCCCACATCTG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCCCATAGGCACTTCCTaGGAGTCAGGAGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAPIGTS*ESGETA
Trigger: CGCTGTCTCTCCTGACTCTCAGGAAGTGCCTATGGG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCTCTGCAGGCCCAGCTaGTCGATGTGCATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALCRPS*SMCICL
Trigger: GAGGCAGATGCACATCGAGCAGCTGGGCCTGCAGAG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCTGGGCCCTTTCTCCTaGGGAGCTGAGGGTCCGTTT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCLGPFS*GAEGPF
Trigger: AAACGGACCCTCAGCTCCCCAGGAGAAAGGGCCCAG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTACCCTGGTTTGGCCTaGGCCCTTTCTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAYPGLA*ALSPGE
Trigger: CTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCCTATGGACTTCTCCTaGGCAAGGATGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAPMDFS*ARMASR
Trigger: CCGCGATGCCATCCTTGCTCAGGAGAAGTCCATAGG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTACACGGTGCGCCTGTaGCACTTCTCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCYTVRL*HFSANS
Trigger: GCTGTTGGCTGAGAAGTGTCACAGGCGCACCGTGTA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAAGGTCCTGGACTTTCTaGCTCTGCAGGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIRSWTF*LCRPSC
Trigger: GCAGCTGGGCCTGCAGAGTCAGAAAGTCCAGGACCT...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTACAGCCTGCCTCGGTTaGTTTCCCTCTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCATACLG*FPSPPP
Trigger: AGGAGGTGGAGAGGGAAATCAACCGAGGCAGGCTGT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTGTCTTCCGGGCAGGTaGACTCAGACCCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCCLPGR*TQTPCT
Trigger: TGTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCTTTGGTCAGGTTaGGGACCTCCCTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCALWSG*GPPSPC
Trigger: ACATGGGGAGGGAGGTCCTCAACCTGACCAAAGAGC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGGAAGGATTTGCGGATaGACACAGCCGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAGRICG*TQPGSP
Trigger: AGGAGACCCCGGCTGTGTTCATCCGCAAATCCTTCC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCAGCAGTGCTGTTCTCGTaGTCAGGTGTCACACGGATG +
Preference number: 4 (lower is better)
Translates to: GSMERGPQISLMKILRASAVLFS*SGVTRM
Trigger: CATCCGTGTGACACCTGATCACGAGAACAGCACTGC...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGGTTCCTCGTGTGGATaGCGTTGTGACCGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAGSSCG*RCDRGY
Trigger: ATAACCCCGGTCACAACGTCATCCACACGAGGAACC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGTGGGTGTAGGCCGCTaGGATGACCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAVGVGR*DDPSCP
Trigger: AGGACAAGATGGGTCATCTCAGCGGCCTACACCCAC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCCCAGCTGCTCGATGTaGATCTGCCTCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCPSCSM*ICLSST
Trigger: GGTGGATGAGAGGCAGATGCACATCGAGCAGCTGGG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAACCAGCTCGCCAGGGTaGCCTGTACCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLTSSPG*PVPWFG
Trigger: GCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGGT...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGGATGCAGGCCTGTCTaGAAACGCGCCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWGCRPV*KRAPST
Trigger: GGTGGAAGGGGCGCGTTTGCAGACAGGCCTGCATCC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTCTCCTGAGCAAGGATaGCATCGCGGTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCSPEQG*HRGAGL
Trigger: GAGTCCTGCACCGCGATGCCATCCTTGCTCAGGAGA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCGCAGCTCGGCTTCCTaGCTCACAGCCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWRSSAS*LTASPF
Trigger: GAAAGGGGAGGCTGTGAGCCAGGAAGCCGAGCTGCG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACGCAGCTCGGCTTCCTaGCTCACAGCCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLRSSAS*LTASPF
Trigger: GAAAGGGGAGGCTGTGAGCCAGGAAGCCGAGCTGCG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGGACATGGCTCGTTCTaGGCCGAGAGTAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAGHGSF*AESRIC
Trigger: GCAGATCCTACTCTCGGCCCAGAACGAGCCATGTCC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCAAGAGAGGTGGTTCCTaGGAGAGCGAAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAKRGGS*ESEGLC
Trigger: GCACAGTCCTTCGCTCTCCCAGGAACCACCTCTCTT...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATTATCTCTCAGCTCCTaGAGCTCTTCCTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GSMERGPQISLMKILRASLSLSS*SSSSAF
Trigger: GAAGGCCGAGGAAGAGCTTCAGGAGCTGAGAGATAA...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACAGCCTGCCTCGGTTaGTTTCCCTCTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFITACLG*FPSPPP
Trigger: AGGAGGTGGAGAGGGAAATCAACCGAGGCAGGCTGT...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGCTCTTTGGTCAGGTTaGGGACCTCCCTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIALWSG*GPPSPC
Trigger: ACATGGGGAGGGAGGTCCTCAACCTGACCAAAGAGC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACATTTCCACTCGGCCTaGGAGCTCGGCTGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLHFHSA*ELGCSA
Trigger: AGCGCTACAGCCGAGCTCTCAGGCCGAGTGGAAATG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGGAAGGATTTGCGGATaGACACAGCCGGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIGRICG*TQPGSP
Trigger: AGGAGACCCCGGCTGTGTTCATCCGCAAATCCTTCC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGCAGTGCTGTTCTCGTaGTCAGGTGTCACACGGATG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAAVLFS*SGVTRM
Trigger: CATCCGTGTGACACCTGATCACGAGAACAGCACTGC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCAGATGTGGGGCTTGTaGTCTCCAGGGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWQMWGL*SPGWQC
Trigger: GCACTGCCACCCTGGAGATCACAAGCCCCACATCTG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGGTTCCTCGTGTGGATaGCGTTGTGACCGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCGSSCG*RCDRGY
Trigger: ATAACCCCGGTCACAACGTCATCCACACGAGGAACC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTGCTTTCATACCTTTTaGCATGGGGATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATACFHTF*HGDAGG
Trigger: CCCACCCGCATCCCCATGTCAAAAGGTATGAAAGCA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTAACCTCTCTCGCTCCTaGTCCAGCAGGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCANLSRS*SSRLVK
Trigger: CTTCACCAACCTGCTGGAGCAGGAGCGAGAGAGGTT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTGCTCGATGTGCATCTaGCTCTCATCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATACSMCI*LSSTSM
Trigger: CATGCTGGTGGATGAGAGGCAGATGCACATCGAGCA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCTCTGCAGGCCCAGCTaGTCGATGTGCATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWLCRPS*SMCICL
Trigger: GAGGCAGATGCACATCGAGCAGCTGGGCCTGCAGAG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTCTCCAGGGTGGCAGTaGTGTTCTCGTGATCAGGTG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASPGWQ*CSRDQV
Trigger: CACCTGATCACGAGAACAGCACTGCCACCCTGGAGA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTATCTGGATGGGGGATaGAGGCCTGTCTGCAAACGC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAYLDGG*RPVCKR
Trigger: GCGTTTGCAGACAGGCCTGCATCCCCCATCCAGATA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTTTGGTCAGATTTCCTaGTCCTGGGGCTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAFGQIS*SWGCHY
Trigger: GTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATCTCCTGAGCAAGGATaGCATCGCGGTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFISPEQG*HRGAGL
Trigger: GAGTCCTGCACCGCGATGCCATCCTTGCTCAGGAGA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACCCTGTACCCTGGTTTaGCCTGGGCCCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLPCTLV*PGPFLL
Trigger: CAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGGACATGGCTCGTTCTaGGCCGAGAGTAGGATCTGC +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIGHGSF*AESRIC
Trigger: GCAGATCCTACTCTCGGCCCAGAACGAGCCATGTCC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTAAGAGAGGTGGTTCCTaGGAGAGCGAAGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCKRGGS*ESEGLC
Trigger: GCACAGTCCTTCGCTCTCCCAGGAACCACCTCTCTT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCCTATGGACTTCTCCTaGGCAAGGATGGCATCGCGG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWPMDFS*ARMASR
Trigger: CCGCGATGCCATCCTTGCTCAGGAGAAGTCCATAGG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACCCATAGGCACTTCCTaGGAGTCAGGAGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLPIGTS*ESGETA
Trigger: CGCTGTCTCTCCTGACTCTCAGGAAGTGCCTATGGG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTACATCTTCTCGAGCCTaGAGCTCCCCTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCTSSRA*SSPSMM
Trigger: CATCATGGAAGGGGAGCTGCAGGCTCGAGAAGATGT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCCAGCTCGTACACGGTaGGCCTGTGACACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWPARTR*ACDTSQ
Trigger: CTGAGAAGTGTCACAGGCGCACCGTGTACGAGCTGG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACCAGCTCGTACACGGTaGGCCTGTGACACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLPARTR*ACDTSQ
Trigger: CTGAGAAGTGTCACAGGCGCACCGTGTACGAGCTGG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCGTTCATCTCTTCGTaGTCCTGGGAAAACCTCGAG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCAFISS*SWENLE
Trigger: CTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCAGGCAGTGCTGCTGGCTaGAGATTTCTTCAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: GSMERGPQISLMKILRASGSAAG*RFLQLY
Trigger: ATAGAGCTGAAGAAATCTGCAGCCAGCAGCACTGCC...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCAAGAGAGGCAGTGCTaGTGGCTGCAGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAQERQC*WLQISS
Trigger: TGAAGAAATCTGCAGCCAGCAGCACTGCCTCTCTTG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCATGATGCTCAGGAGCTaGATGAGGTCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAMMLRS*MRSSLD
Trigger: ATCCAAGGAGGACCTCATCCAGCTCCTGAGCATCAT...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTATCTCTTCGTGCTCCTaGGAAAACCTCGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAISSCS*ENLEAL
Trigger: CAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGAT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTTCTCACTCTCTCCTaGTGGCTTGAGGTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAFLTLS*WLEVAF
Trigger: AAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLAPAGW*SRRSCS
Trigger: TGAACAAGAGCGACGACTTCACCAACCTGCTGGAGC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCTCTCAGTTTCTGAGTaGGGTCCTGGACTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALSVSE*GPGLSD
Trigger: GTCAGAAAGTCCAGGACCTCACTCAGAAACTGAGAG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGATGACGCTTTCTTTTaGCATGGGGATGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLDDAFF*HGDAGG
Trigger: CCCACCCGCATCCCCATGTCAAAAGAAAGCGTCATC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATCTCCACCTCCTCTATaGCATCAAGCCGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GSMERGPQISLMKILRASSPPPL*HQAASL
Trigger: TAAAGAAGCGGCTTGATGGCATAGAGGAGGTGGAGA...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCTGGGAGAGGAAATTTaGCTTATCCTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATALGEEI*LILLGS
Trigger: AGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATACTCCAAGAGAGGCAGTaGTGCTGGCTGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFILQERQ*CWLQIS
Trigger: AGAAATCTGCAGCCAGCAGCACTGCCTCTCTTGGAG...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTATGATGCTCAGGAGCTaGATGAGGTCCTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAMMLRS*MRSSLD
Trigger: ATCCAAGGAGGACCTCATCCAGCTCCTGAGCATCAT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTCCGTCTTCAGCATGTaGATGACATCTTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASVFSM*MTSSRA
Trigger: GGCTCGAGAAGATGTCATCCACATGCTGAAGACGGA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTAGGGCTGGCCCTGCTTaGGTGCTAGGACCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFRAGPA*VLGPAR
Trigger: GCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCT...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCCGTCATTATCTGGATaGGGGATGCAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWPSLSG*GMQACL
Trigger: CAGACAGGCCTGCATCCCCCATCCAGATAATGACGG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACCGTCATTATCTGGATaGGGGATGCAGGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLPSLSG*GMQACL
Trigger: CAGACAGGCCTGCATCCCCCATCCAGATAATGACGG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGACACCGTCATTATCTaGATGGGGGATGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWDTVII*MGDAGL
Trigger: CAGGCCTGCATCCCCCATCCAGATAATGACGGTGTC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGACACCGTCATTATCTaGATGGGGGATGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLDTVII*MGDAGL
Trigger: CAGGCCTGCATCCCCCATCCAGATAATGACGGTGTC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATTATCTCTCAGCTCCTaGAGCTCTTCCTCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLLSLSS*SSSSAF
Trigger: GAAGGCCGAGGAAGAGCTTCAGGAGCTGAGAGATAA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCGACATGACATTGGGTaGTGGAATTATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCRHDIG*WNYGDP
Trigger: CGGATCACCATAATTCCATCACCCAATGTCATGTCG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATGCTCGATGTGCATCTaGCTCTCATCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLCSMCI*LSSTSM
Trigger: CATGCTGGTGGATGAGAGGCAGATGCACATCGAGCA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTCTCCACCTCCTCTATaGCATCAAGCCGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASPPPL*HQAASL
Trigger: TAAAGAAGCGGCTTGATGGCATAGAGGAGGTGGAGA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCTGGGAGAGGAAATTTaGCTTATCCTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCLGEEI*LILLGS
Trigger: AGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGCACTTTTGGGCTTTTaGGACATGACATTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAALLGF*DMTLGD
Trigger: ATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTAACTTGAGCAGTTTCTaGCGGTCTTCCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCNLSSF*RSSLDL
Trigger: CAAGTCCAAGGAAGACCGCCAGAAACTGCTCAAGTT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGATCTCTTCGTGCTCCTaGGAAAACCTCGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWISSCS*ENLEAL
Trigger: CAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGAT...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCATTTCCTCGAGCTGCTaGGAGAGGAAATTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAISSSC*ERKFAL
Trigger: TAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAAT...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCCTCCCCTTTCTCTATaGCTTTGTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAPPLSL*LCSWPF
Trigger: AAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGTGATCCGTGGTTTCTaGTTGCCTAAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCVIRGF*LPKVGM
Trigger: CATTCCTACCTTAGGCAACCAGAAACCACGGATCAC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCATTGTACTTCCGCATaGGGGTTGGAACAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATAHCTSA*GLEQFV
Trigger: AACAAACTGTTCCAACCCCCATGCGGAAGTACAATG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGTTTCTCACTCTCTCCTaGTGGCTTGAGGTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWFLTLS*WLEVAF
Trigger: AAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAA...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCTCTCAGTTTCTGAGTaGGGTCCTGGACTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWLSVSE*GPGLSD
Trigger: GTCAGAAAGTCCAGGACCTCACTCAGAAACTGAGAG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATTTCCACTTCCGCCATaGGACTGGAGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIFPLPP*DWSFHI
Trigger: AATGTGGAAACTCCAGTCTCATGGCGGAAGTGGAAA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTCCCCTGCTCCACCTTaGAGTTTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCSPAPP*SFYSTH
Trigger: ATGGGTTGAATAAAAACTTCAAGGTGGAGCAGGGGA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCGGTATGTCTCCTTCTaGTTTTCCTCCAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWRYVSF*FSSSLS
Trigger: GGACAGACTGGAGGAAAAGCAGAAGGAGACATACCG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTAGTTCCTCGATCCTTTaGGATAAGCCAACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCSSSIL*DKPTSL
Trigger: CAAACTGGTTGGCTTATCGCAAAGGATCGAGGAACT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTCGGTTCTGAATTTCTaGTCCAACTGGTCGTATTCG +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASVLNF*SNWSYS
Trigger: CGAATACGACCAGTTGGAGCAGAAATTCAGAACCGA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTAATTTCCTCGAGCTaGTGGGAGAGGAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALISSS*WERKFA
Trigger: GGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTCTCTTTAAGAGCCTaGACCTCAGCCTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAFSLRA*TSACKS
Trigger: TGACTTACAGGCTGAGGTGCAGGCTCTTAAAGAGAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCACTTTTGGGCTTTTaGGACATGACATTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCALLGF*DMTLGD
Trigger: ATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTCCTGCTCCTGGGGCTaGCACTACTGGCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVSCSWG*HYWLSC
Trigger: GCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTCGAAGCACTTTCTCTaGTTCTGCAGATCCATAATG +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATASKHFL*FCRSIM
Trigger: CATTATGGATCTGCAGAACCAGAGAAAGTGCTTCGA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTGTCCAGCTCTGAGATaGGTTTCTCATAGACATCTT +
Preference number: 4 (lower is better)
Translates to: FVSTAAVASLQHTPLATACPALR*VSHRHL
Trigger: AAGATGTCTATGAGAAACCCATCTCAGAGCTGGACA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATGGTGTTCTTCCTCTTaGAGCTTCTTCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIWCSSS*SFFFSS
Trigger: GGAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATTCTCCAGGTTCAAATaGAGCTGGGTGCATTCCGAC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLFSRFK*SWVHSD
Trigger: GTCGGAATGCACCCAGCTCCATTTGAACCTGGAGAA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTATTTCCTCGAGCTGCTaGGAGAGGAAATTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCISSSC*ERKFAL
Trigger: TAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAAT...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTCCTCCCCTTTCTCTATaGCTTTGTTCTTGGCCATTT +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCPPLSL*LCSWPF
Trigger: AAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGG...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTACCCTGGTTTGGCCTaGGCCCTTTCTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVYPGLA*ALSPGE
Trigger: CTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCCCCTGTACCCTGGTTTaGCCTGGGCCCTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVPCTLV*PGPFLL
Trigger: CAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGG...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATGTCCTGACACTGATTaGGTTCCTCGTGTGGATGAC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLCPDTD*VPRVDD
Trigger: GTCATCCACACGAGGAACCCAATCAGTGTCAGGACA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
3UTR CAA 72 bp ACTTGGCTTACAATTAGAAGAACTGGGAGCCAGTCTTaGGAAGCATGGAACGTGGTCCCCAAATCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: TWLTIRRTGSQS*EAWNVVPKSLS
Trigger: TGAGAGAGATTTGGGGACCACGTTCCATGCTTCCAAAGACTGGCTCCCAGTTCTTCTAATTGTAAGCCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTACACGGTGCGCCTGTaGCACTTCTCAGCCAACAGC +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVYTVRL*HFSANS
Trigger: GCTGTTGGCTGAGAAGTGTCACAGGCGCACCGTGTA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATTTCCACTTCCGCCATaGGACTGGAGTTTCCACATT +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLFPLPP*DWSFHI
Trigger: AATGTGGAAACTCCAGTCTCATGGCGGAAGTGGAAA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATCCCCTGCTCCACCTTaGAGTTTTTATTCAACCCAT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFISPAPP*SFYSTH
Trigger: ATGGGTTGAATAAAAACTTCAAGGTGGAGCAGGGGA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCGACATGACATTGGGTaGTGGAATTATGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWRHDIG*WNYGDP
Trigger: CGGATCACCATAATTCCATCACCCAATGTCATGTCG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCGTGGGTGTAGGCCGCTaGGATGACCCATCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVVGVGR*DDPSCP
Trigger: AGGACAAGATGGGTCATCTCAGCGGCCTACACCCAC...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCACTTTCTCTGGTTCTaGAGATCCATAATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWHFLWF*RSIMRL
Trigger: GAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACACTTTCTCTGGTTCTaGAGATCCATAATGCGCCTC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLHFLWF*RSIMRL
Trigger: GAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCCCCAGCTGCTCGATGTaGATCTGCCTCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVPSCSM*ICLSST
Trigger: GGTGGATGAGAGGCAGATGCACATCGAGCAGCTGGG...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAAGTTCCTCGATCCTTTaGGATAAGCCAACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFISSSIL*DKPTSL
Trigger: CAAACTGGTTGGCTTATCGCAAAGGATCGAGGAACT...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATTAATTTCCTCGAGCTaGTGGGAGAGGAAATTTGCC +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFILISSS*WERKFA
Trigger: GGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATGGTGTTCTTCCTCTTaGAGCTTCTTCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLWCSSS*SFFFSS
Trigger: GGAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTGTTCATCAGCTCGTaGATCTTCTCTTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALFISS*IFSLRA
Trigger: GGCTCTTAAAGAGAAGATCCACGAGCTGATGAACAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGTGATCCGTGGTTTCTaGTTGCCTAAGGTAGGAATG +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWVIRGF*LPKVGM
Trigger: CATTCCTACCTTAGGCAACCAGAAACCACGGATCAC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFAPAGW*SRRSCS
Trigger: TGAACAAGAGCGACGACTTCACCAACCTGCTGGAGC...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGTCGAAGATTACTCATaGTGTGATTTTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCVEDYS*CDFLPG
Trigger: TCCAGGAAGAAAATCACATCATGAGTAATCTTCGAC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCAACCTCTCTCGCTCCTaGTCCAGCAGGTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVNLSRS*SSRLVK
Trigger: CTTCACCAACCTGCTGGAGCAGGAGCGAGAGAGGTT...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTCTCCAGGGTGGCAGTaGTGTTCTCGTGATCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVSPGWQ*CSRDQV
Trigger: CACCTGATCACGAGAACAGCACTGCCACCCTGGAGA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTATCTGGATGGGGGATaGAGGCCTGTCTGCAAACGC +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFYLDGG*RPVCKR
Trigger: GCGTTTGCAGACAGGCCTGCATCCCCCATCCAGATA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTACATTGTACTTCCGCATaGGGGTTGGAACAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLHCTSA*GLEQFV
Trigger: AACAAACTGTTCCAACCCCCATGCGGAAGTACAATG...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGACATGCCCATTAGATaGACTTTCTCCACCTTGATT +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWDMPIR*TFSTLI
Trigger: AATCAAGGTGGAGAAAGTTCATCTAATGGGCATGTC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGACATGCCCATTAGATaGACTTTCTCCACCTTGATT +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLDMPIR*TFSTLI
Trigger: AATCAAGGTGGAGAAAGTTCATCTAATGGGCATGTC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCACATCTTCTCGAGCCTaGAGCTCCCCTTCCATGATG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVTSSRA*SSPSMM
Trigger: CATCATGGAAGGGGAGCTGCAGGCTCGAGAAGATGT...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTGCGTTCATCTCTTCGTaGTCCTGGGAAAACCTCGAG +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFAFISS*SWENLE
Trigger: CTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGC...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATGTCCAGCTCTGAGATaGGTTTCTCATAGACATCTT +
Preference number: 4 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLCPALR*VSHRHL
Trigger: AAGATGTCTATGAGAAACCCATCTCAGAGCTGGACA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCGAGAGGCAGTGCTGCTaGCTGCAGATTTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVERQCC*LQISSA
Trigger: AGCTGAAGAAATCTGCAGCCAGCAGCACTGCCTCTC...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTCTTCAGCATGTGGATaGCATCTTCTCGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSSACG*HLLEPA
Trigger: TGCAGGCTCGAGAAGATGTCATCCACATGCTGAAGA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGTCGAAGATTACTCATaGTGTGATTTTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PNLSHEDTEGFITRELHWVEDYS*CDFLPG
Trigger: TCCAGGAAGAAAATCACATCATGAGTAATCTTCGAC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGTTTTAAAAGCTTCTTaGTTTCCTCGATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAVLKAS*FPRLAS
Trigger: AGAAGCTAATCGAGGAAAGCAAGAAGCTTTTAAAAC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTCCGTCTTCAGCATGTaGATGACATCTTCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSVFSM*MTSSRA
Trigger: GGCTCGAGAAGATGTCATCCACATGCTGAAGACGGA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTTCTCCAGGTTCAAATaGAGCTGGGTGCATTCCGAC +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVFSRFK*SWVHSD
Trigger: GTCGGAATGCACCCAGCTCCATTTGAACCTGGAGAA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTGTCCTGACACTGATTaGGTTCCTCGTGTGGATGAC +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVCPDTD*VPRVDD
Trigger: GTCATCCACACGAGGAACCCAATCAGTGTCAGGACA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTCTCGAGGCTGGAATTTaGTCAGATTTCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFLEAGI*SDFLLL
Trigger: CAGGAGCAGGAAATCTGACCAAATTCCAGCCTCGAG...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR TCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSIFID*VSARGW
Trigger: CCAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGTTTTAAAAGCTTCTTaGTTTCCTCGATTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIVLKAS*FPRLAS
Trigger: AGAAGCTAATCGAGGAAAGCAAGAAGCTTTTAAAAC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCAACTTGAGCAGTTTCTaGCGGTCTTCCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVNLSSF*RSSLDL
Trigger: CAAGTCCAAGGAAGACCGCCAGAAACTGCTCAAGTT...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTCGGTTCTGAATTTCTaGTCCAACTGGTCGTATTCG +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVSVLNF*SNWSYS
Trigger: CGAATACGACCAGTTGGAGCAGAAATTCAGAACCGA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR GCA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTTCTCTTTAAGAGCCTaGACCTCAGCCTGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVFSLRA*TSACKS
Trigger: TGACTTACAGGCTGAGGTGCAGGCTCTTAAAGAGAA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CCA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTTGTTCATCAGCTCGTaGATCTTCTCTTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: ETNAQNREESRKAIRWLFLFISS*IFSLRA
Trigger: GGCTCTTAAAGAGAAGATCCACGAGCTGATGAACAA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
3UTR CAA 72 bp TTCCACAGTTCATTTCCACTTTATTGCATGTTCAAATaGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FHSSFPLYCMFK*FPEVILGAFVF
Trigger: AAAGACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGGAAATGAACTGTGGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS GCA 90 bp TGCAAGGGCTGGCCCTGCTTGGGTGCTAGGACCAGCTCGCCAGGGTaGCCTGTACCCTGGTTTGGCCTGGGCCCTTTCTCCTGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: CKGWPCLGARTSSPG*PVPWFGLGPFSWGA
Trigger: AGCTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp CCCTGCTTGGGTGCTAGGACCAGCTCGCCAGGGTGCCCTGTACCCTaGTTTGGCCTGGGCCCTTTCTCCTGGGGAGCTGAGGGTCCGTTT +
Preference number: 5 (lower is better)
Translates to: PCLGARTSSPGCPVP*FGLGPFSWGAEGPF
Trigger: AAACGGACCCTCAGCTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp TCTCGTGATCAGGTGTCACACGGATGTGCAAGGGCTGGCCCTGCTTaGGTGCTAGGACCAGCTCGCCAGGGTGCCCTGTACCCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SRDQVSHGCARAGPA*VLGPARQGALYPGL
Trigger: CAAACCAGGGTACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCTTGCACATCCGTGTGACACCTGATCACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp AGGCCACGGGTACGTCCACCATCCTTCGGCCATTTCCACTCGGCCTaGGAGCTCGGCTGTAGCGCTTGGAAAGCTCCAGCTCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: RPRVRPPSFGHFHSA*ELGCSAWKAPALWS
Trigger: TGACCAAAGAGCTGGAGCTTTCCAAGCGCTACAGCCGAGCTCTCAGGCCGAGTGGAAATGGCCGAAGGATGGTGGACGTACCCGTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp TCAGATGTGGGGCTTGTGATCTCCAGGGTGGCAGTGCTGTTCTCGTaGTCAGGTGTCACACGGATGTGCAAGGGCTGGCCCTGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SDVGLVISRVAVLFS*SGVTRMCKGWPCLG
Trigger: ACCCAAGCAGGGCCAGCCCTTGCACATCCGTGTGACACCTGATCACGAGAACAGCACTGCCACCCTGGAGATCACAAGCCCCACATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp GTTGACAGGCCGGACCGTGATAACTGGACTCACGCCTTCCGCTGCTaGAGGCCCGGGAGATCGCTTAAACTGAGAACCCAGGTGAATGTG +
Preference number: 5 (lower is better)
Translates to: VDRPDRDNWTHAFRC*RPGRSLKLRTQVNV
Trigger: CACATTCACCTGGGTTCTCAGTTTAAGCGATCTCCCGGGCCTGCAGCAGCGGAAGGCGTGAGTCCAGTTATCACGGTCCGGCCTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp TACGTTGACAGGCCGGACCGTGATAACTGGACTCACGCCTTCCGCTaGTGCAGGCCCGGGAGATCGCTTAAACTGAGAACCCAGGTGAAT +
Preference number: 5 (lower is better)
Translates to: YVDRPDRDNWTHAFR*CRPGRSLKLRTQVN
Trigger: ATTCACCTGGGTTCTCAGTTTAAGCGATCTCCCGGGCCTGCAGCAGCGGAAGGCGTGAGTCCAGTTATCACGGTCCGGCCTGTCAACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp TCGTCCTCGGTCTTCATCAAGTCCCCCTCCACCACCTCCAGCTGCTaGAGCCGCTTCTTCAGTCTCTCGATTTCAAGCGTCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSSVFIKSPSTTSSC*SRFFSLSISSVSSL
Trigger: CAGGGAACTGACGCTTGAAATCGAGAGACTGAAGAAGCGGCTCCAGCAGCTGGAGGTGGTGGAGGGGGACTTGATGAAGACCGAGGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp CTGAGAGTCAGGAGAGACAGCGATTTCAGGGGGCGCTGCAGACGTTaGCACCGTCATTATCTGGATGGGGGATGCAGGCCTGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LRVRRDSDFRGRCRR*HRHYLDGGCRPVCK
Trigger: TTTGCAGACAGGCCTGCATCCCCCATCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCCCTGAAATCGCTGTCTCTCCTGACTCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp CTGAGCAAGGATGGCATCGCGGTGCAGGACTCGAAGCACTTTCTCTaGTTCTGCAGATCCATAATGCGCCTCCAGAACCTCGGGCTTGGT +
Preference number: 5 (lower is better)
Translates to: LSKDGIAVQDSKHFL*FCRSIMRLQNLGLG
Trigger: ACCAAGCCCGAGGTTCTGGAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTGCTTCGAGTCCTGCACCGCGATGCCATCCTTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS GCA 90 bp AAGGATGGCATCGCGGTGCAGGACTCGAAGCACTTTCTCTGGTTCTaGAGATCCATAATGCGCCTCCAGAACCTCGGGCTTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KDGIAVQDSKHFLWF*RSIMRLQNLGLGLL
Trigger: GAGAAGACCAAGCCCGAGGTTCTGGAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTGCTTCGAGTCCTGCACCGCGATGCCATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS GCA 90 bp TATTCGTCCTCGGTCTTCATCAAGTCCCCCTCCACCACCTCCAGCTaGTGGAGCCGCTTCTTCAGTCTCTCGATTTCAAGCGTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: YSSSVFIKSPSTTSS*WSRFFSLSISSVSS
Trigger: GGAACTGACGCTTGAAATCGAGAGACTGAAGAAGCGGCTCCAGCAGCTGGAGGTGGTGGAGGGGGACTTGATGAAGACCGAGGACGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp CTTTTAGCCTCCTCCATCCGGAACCTGTGTCGCAGCTCGGCTTCCTaGCTCACAGCCTCCCCTTTCTCTATGGCTTTGTTCTTGGCCATT +
Preference number: 5 (lower is better)
Translates to: LLASSIRNLCRSSAS*LTASPFSMALFLAI
Trigger: AATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGCTGTGAGCCAGGAAGCCGAGCTGCGACACAGGTTCCGGATGGAGGAGGCTAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp GCTTTCATACCTTTTGACATGGGGATGCGGGTGGGTGTAGGCCGCTaGGATGACCCATCTTGTCCTGACACTGATTGGGTTCCTCGTGTG +
Preference number: 5 (lower is better)
Translates to: AFIPFDMGMRVGVGR*DDPSCPDTDWVPRV
Trigger: CACACGAGGAACCCAATCAGTGTCAGGACAAGATGGGTCATCTCAGCGGCCTACACCCACCCGCATCCCCATGTCAAAAGGTATGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS TCA 90 bp ATGACGCTTTCTTTTGACATGGGGATGCGGGTGGGTGTAGGCCGCTaGGATGACCCATCTTGTCCTGACACTGATTGGGTTCCTCGTGTG +
Preference number: 5 (lower is better)
Translates to: MTLSFDMGMRVGVGR*DDPSCPDTDWVPRV
Trigger: CACACGAGGAACCCAATCAGTGTCAGGACAAGATGGGTCATCTCAGCGGCCTACACCCACCCGCATCCCCATGTCAAAAGAAAGCGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS CCA 90 bp CTGTGGTGTTCTTCCTCTTGGAGCTTCTTCTTCAGCTCCCGGCACTaGGCCTCGGTCTTAGTGATCTCTTCATCCTTGCCCTCCATCTCA +
Preference number: 5 (lower is better)
Translates to: LWCSSSWSFFFSSRH*ASVLVISSSLPSIS
Trigger: TGAGATGGAGGGCAAGGATGAAGAGATCACTAAGACCGAGGCCCAGTGCCGGGAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCACTGATGATGGAGGGCTaGGGGCAGGAGACATGCCCA +
Preference number: 5 (lower is better)
Translates to: GSMERGPQISLMKILRASLMMEG*GQETCP
Trigger: TGGGCATGTCTCCTGCCCCAAGCCCTCCATCATCAG...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS TCA 90 bp CGGGGTTATGGTTATAGTGCTGGTCACTTTGTTAGCACCAGGTCTTaGAGAGAGGTGGTTCCTGGGAGAGCGAAGGACTGTGCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: RGYGYSAGHFVSTRS*REVVPGRAKDCARR
Trigger: TCTACGGGCACAGTCCTTCGCTCTCCCAGGAACCACCTCTCTTCAAGACCTGGTGCTAACAAAGTGACCAGCACTATAACCATAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp GCCCAGCTGCTCGATGTGCATCTGCCTCTCATCCACCAGCATGAGTaGGAAGGACTTGAGTTTCACAAGCTCATCCCGAAGTTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: AQLLDVHLPLIHQHE*EGLEFHKLIPKFVE
Trigger: CTCAACAAACTTCGGGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCATGCTGGTGGATGAGAGGCAGATGCACATCGAGCAGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCTGATGATGGAGGGCTaGGGGCAGGAGACATGCCCA +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALMMEG*GQETCP
Trigger: TGGGCATGTCTCCTGCCCCAAGCCCTCCATCATCAG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATCCAGAACCTCGGGCTaGGTCTTCTCCGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GSMERGPQISLMKILRASSRTSG*VFSVFS
Trigger: GCTGAAGACGGAGAAGACCAAGCCCGAGGTTCTGGA...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGGGGCGCTGCAGACGTaGACACCGTCATTATCTGGA +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAGALQT*TPSLSG
Trigger: TCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS CCA 90 bp AGAGGCTTCTTAGTCTTTTTCTCACTCTCTCCTGATGGCTTGAGGTaGCGTTTGACGGTTCCGGAAGCCATGACATCATCCTCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: RGFLVFFSLSPDGLR*RLTVPEAMTSSSPF
Trigger: GAAGGGGGAGGATGATGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAAGAAGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CCA 90 bp GTTATAGTGCTGGTCACTTTGTTAGCACCAGGTCTTGAAGAGAGGTaGTTCCTGGGAGAGCGAAGGACTGTGCCCGTAGAAACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VIVLVTLLAPGLEER*FLGERRTVPVETSF
Trigger: GAAGGAGGTTTCTACGGGCACAGTCCTTCGCTCTCCCAGGAACCACCTCTCTTCAAGACCTGGTGCTAACAAAGTGACCAGCACTATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTCCAGAACCTCGGGCTaGGTCTTCTCCGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCSRTSG*VFSVFS
Trigger: GCTGAAGACGGAGAAGACCAAGCCCGAGGTTCTGGA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGAAAGCTCCAGCTCTTaGGTCAGGTTGAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAESSSS*VRLRTS
Trigger: GGAGGTCCTCAACCTGACCAAAGAGCTGGAGCTTTC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGGCCCTGTACCCTGGTTaGGCCTGGGCCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PNLSHEDTEGFITRELHWALYPG*AWALSP
Trigger: AGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGC...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCCCTGTACCCTGGTTaGGCCTGGGCCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLALYPG*AWALSP
Trigger: AGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGGGGCGCTGCAGACGTaGACACCGTCATTATCTGGA +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCGALQT*TPSLSG
Trigger: TCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS TCA 90 bp CCTCGAGCTGCTGGGAGAGGAAATTTGCCTTATCCTGCTCGGTTCTaGATTTCTGCTCCAACTGGTCGTATTCGTCCTCGGTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: PRAAGRGNLPYPARF*ISAPTGRIRPRSSS
Trigger: TGATGAAGACCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp TGCTGGGAGAGGAAATTTGCCTTATCCTGCTCGGTTCTGAATTTCTaGTCCAACTGGTCGTATTCGTCCTCGGTCTTCATCAAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: CWERKFALSCSVLNF*SNWSYSSSVFIKSP
Trigger: GGGGGACTTGATGAAGACCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp CATAGACTGAGTCTCAGCTCGAGGCTGGAATTTGGTCAGATTTCCTaGTCCTGGGGCTGCCACTACTGGCTTTCCTGCTTTCATACCTTT +
Preference number: 5 (lower is better)
Translates to: HRLSLSSRLEFGQIS*SWGCHYWLSCFHTF
Trigger: AAAGGTATGAAAGCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAATTCCAGCCTCGAGCTGAGACTCAGTCTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS CCA 90 bp AGGAAATTTGCCTTATCCTGCTCGGTTCTGAATTTCTGCTCCAACTaGTCGTATTCGTCCTCGGTCTTCATCAAGTCCCCCTCCACCACC +
Preference number: 5 (lower is better)
Translates to: RKFALSCSVLNFCSN*SYSSSVFIKSPSTT
Trigger: GGTGGTGGAGGGGGACTTGATGAAGACCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTGGATGAGGTCCTCCTaGGATAACTCCAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAWMRSS*DNSRGF
Trigger: GAAGCCTCTGGAGTTATCCAAGGAGGACCTCATCCA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGTGATCTCTTCATCCTaGCCCTCCATCTCAAGCACG +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAVISSS*PSISST
Trigger: CGTGCTTGAGATGGAGGGCAAGGATGAAGAGATCAC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCCTGCTTTCATACCTTTaGACATGGGGATGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATALLSYL*TWGCGW
Trigger: CCACCCGCATCCCCATGTCAAAAGGTATGAAAGCAG...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGCTCGAGGCTGGAATTaGGTCAGATTTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAARGWN*VRFPAP
Trigger: AGGAGCAGGAAATCTGACCAAATTCCAGCCTCGAGC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS GCA 90 bp CCACCTCCTCTATGCCATCAAGCCGCTTCTTTAGCAAGTCAACGCTaGAGCTCAGTTCACAGGACCTTTCTTCTTCGCTTCTCAGTTTAC +
Preference number: 5 (lower is better)
Translates to: PPPLCHQAASLASQR*SSVHRTFLLRFSVY
Trigger: GTAAACTGAGAAGCGAAGAAGAAAGGTCCTGTGAACTGAGCTGCAGCGTTGACTTGCTAAAGAAGCGGCTTGATGGCATAGAGGAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATCCTGCTCCAGCAGGTaGGTGAAGTCGTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSCSSR*VKSSLL
Trigger: CAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGAAAACCTCGAGGCCTaGTGTTCGAAGTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCENLEA*CSKSTS
Trigger: GGAAGTGGACTTCGAACACAAGGCCTCGAGGTTTTC...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGCTGGGAGAGGAAATTaGCCTTATCCTGCTCGGTTC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAAGRGN*PYPARF
Trigger: GAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAAGCTCTTTGGTCAGGTaGAGGACCTCCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSSLVR*RTSLPM
Trigger: CATGGGGAGGGAGGTCCTCAACCTGACCAAAGAGCT...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GGAAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCAATCCGTGGTTTCTGGTaGCCTAAGGTAGGAATGACG +
Preference number: 5 (lower is better)
Translates to: GSMERGPQISLMKILRASIRGFW*PKVGMT
Trigger: CGTCATTCCTACCTTAGGCAACCAGAAACCACGGAT...TGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS TCA 90 bp ATCCTTTGCGATAAGCCAACCAGTTTGAGTCTAAGCTGCCTGTTGTaGGACTCTTGGTTAGCCAACTTGGCGTTCATCTCTTCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ILCDKPTSLSLSCLL*DSWLANLAFISSCS
Trigger: GGAGCACGAAGAGATGAACGCCAAGTTGGCTAACCAAGAGTCTCACAACAGGCAGCTTAGACTCAAACTGGTTGGCTTATCGCAAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp TCCATGGGTTTCTTCAGGCCTACCTGTCGAAGATTACTCATGATGTaGTTTTCTTCCTGGAAGGATTTGCGGATGAACACAGCCGGGGTC +
Preference number: 5 (lower is better)
Translates to: SMGFFRPTCRRLLMM*FSSWKDLRMNTAGV
Trigger: GACCCCGGCTGTGTTCATCCGCAAATCCTTCCAGGAAGAAAATCACATCATGAGTAATCTTCGACAGGTAGGCCTGAAGAAACCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 90 bp GCAGTGCTGCTGGCTGCAGATTTCTTCAGCTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTGGAATTTGGTCAGATTTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: AVLLAADFFSSIFID*VSARGWNLVRFPAP
Trigger: AGGAGCAGGAAATCTGACCAAATTCCAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGAGCTGAAGAAATCTGCAGCCAGCAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS GCA 90 bp GGCCATTTGGTGCTTAATTTCCTCGAGCTGCTGGGAGAGGAAATTTaGCTTATCCTGCTCGGTTCTGAATTTCTGCTCCAACTGGTCGTA +
Preference number: 5 (lower is better)
Translates to: GHLVLNFLELLGEEI*LILLGSEFLLQLVV
Trigger: TACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 90 bp CTCACAGCCTCCCCTTTCTCTATGGCTTTGTTCTTGGCCATTTGGTaGTTAATTTCCTCGAGCTGCTGGGAGAGGAAATTTGCCTTATCC +
Preference number: 5 (lower is better)
Translates to: LTASPFSMALFLAIW*LISSSCWERKFALS
Trigger: GGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp CTCTCAGCTCCTGAAGCTCTTCCTCGGCCTTCTGAAGACTTTTATTaGTCTCTTCCAGTTCCTCGATCCTTTGCGATAAGCCAACCAGTT +
Preference number: 5 (lower is better)
Translates to: LSAPEALPRPSEDFY*SLPVPRSFAISQPV
Trigger: AACTGGTTGGCTTATCGCAAAGGATCGAGGAACTGGAAGAGACCAATAAAAGTCTTCAGAAGGCCGAGGAAGAGCTTCAGGAGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp TGGCTCACAGCCTCCCCTTTCTCTATGGCTTTGTTCTTGGCCATTTaGTGCTTAATTTCCTCGAGCTGCTGGGAGAGGAAATTTGCCTTA +
Preference number: 5 (lower is better)
Translates to: WLTASPFSMALFLAI*CLISSSCWERKFAL
Trigger: TAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGCTGTGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTAAGTCCACTTCCAACTaGAGCAGTTTCTGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAKSTSN*SSFWRS
Trigger: AGACCGCCAGAAACTGCTCAAGTTGGAAGTGGACTT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCCTGTTGTGAGACTCTaGGTTAGCCAACTTGGCGTT +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAPVVRL*VSQLGV
Trigger: AACGCCAAGTTGGCTAACCAAGAGTCTCACAACAGG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGTGGTGTTCTTCCTCTaGGAGCTTCTTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAVVFFL*ELLLQL
Trigger: GAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCAC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCAGTTCCCTGATTTTATaGTCTTCCGGGCAGGTGAAC +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATASSLIL*SSGQVN
Trigger: GTTCACCTGCCCGGAAGACAATAAAATCAGGGAACT...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGAAAGCTCCAGCTCTTaGGTCAGGTTGAGGACCTCC +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLESSSS*VRLRTS
Trigger: GGAGGTCCTCAACCTGACCAAAGAGCTGGAGCTTTC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATCTTCCTGGAAGGATTaGCGGATGAACACAGCCGGG +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSSWKD*RMNTAG
Trigger: CCCGGCTGTGTTCATCCGCAAATCCTTCCAGGAAGA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTATCCGTGGTTTCTGGTaGCCTAAGGTAGGAATGACG +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAIRGFW*PKVGMT
Trigger: CGTCATTCCTACCTTAGGCAACCAGAAACCACGGAT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCGTAGGATCTGCACTTTaGGGCTTTTGCGACATGACA +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATAVGSAL*GFCDMT
Trigger: TGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTAC...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTACTTCCGCATGGGGGTaGGAACAGTTTGTTTTTCCG +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCATSAWG*EQFVFP
Trigger: CGGAAAAACAAACTGTTCCAACCCCCATGCGGAAGT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCTTTTCTTTGCGGGCTaGGTAAGCCTTTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALFFAG*VSLFLL
Trigger: GAGCAAGAAAAGGCTTACCAAGCCCGCAAAGAAAAG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTATGAGTGCGAAGGACTaGAGTTTCACAAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAMSAKD*SFTSSS
Trigger: GGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCAT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTGATAAGCCAACCAGTTaGAGTCTAAGCTGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCADKPTS*SLSCLL
Trigger: CAACAGGCAGCTTAGACTCAAACTGGTTGGCTTATC...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGTGATCTCTTCATCCTaGCCCTCCATCTCAAGCACG +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLVISSS*PSISST
Trigger: CGTGCTTGAGATGGAGGGCAAGGATGAAGAGATCAC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGTGGTGTTCTTCCTCTaGGAGCTTCTTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIVVFFL*ELLLQL
Trigger: GAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCAC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGTCTTTAACCCGACTCTaGACCACCTCCAGCTCGTTC +
Preference number: 5 (lower is better)
Translates to: PNLSHEDTEGFITRELHWSLTRL*TTSSSF
Trigger: GAACGAGCTGGAGGTGGTCAAGAGTCGGGTTAAAGA...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATCTTTAACCCGACTCTaGACCACCTCCAGCTCGTTC +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSLTRL*TTSSSF
Trigger: GAACGAGCTGGAGGTGGTCAAGAGTCGGGTTAAAGA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTAGCTCATCCCTCTCCTaGGTCAGACTATACACCTTT +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASSSLS*VRLYTF
Trigger: AAAGGTGTATAGTCTGACCAAGGAGAGGGATGAGCT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTCCCTCCCCATGTTCTaGTTCTTAGTTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATASLPMF*FLVSSS
Trigger: GGAAGAAGAAACTAAGAACAAGAACATGGGGAGGGA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS CCA 90 bp ATGGCTTTGTTCTTGGCCATTTGGTGCTTAATTTCCTCGAGCTGCTaGGAGAGGAAATTTGCCTTATCCTGCTCGGTTCTGAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: MALFLAIWCLISSSC*ERKFALSCSVLNFC
Trigger: GCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 90 bp TGCGACATGACATTGGGTGATGGAATTATGGTGATCCGTGGTTTCTaGTTGCCTAAGGTAGGAATGACGGTGGTACTCGAGAAAAACTCT +
Preference number: 5 (lower is better)
Translates to: CDMTLGDGIMVIRGF*LPKVGMTVVLEKNS
Trigger: AGAGTTTTTCTCGAGTACCACCGTCATTCCTACCTTAGGCAACCAGAAACCACGGATCACCATAATTCCATCACCCAATGTCATGTCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTGCCTTGTTCTTTTTaGCATCTTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCALPCSF*HLLRVP
Trigger: AGGGACCCTCAGAAGATGCAAAAAAGAACAAGGCAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATACTTTTCTTTGCGGGCTaGGTAAGCCTTTTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFILFFAG*VSLFLL
Trigger: GAGCAAGAAAAGGCTTACCAAGCCCGCAAAGAAAAG...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATCTTGGTTAGCCAACTaGGCGTTCATCTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSWLAN*AFISSC
Trigger: GCACGAAGAGATGAACGCCAAGTTGGCTAACCAAGA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAGATAAGCCAACCAGTTaGAGTCTAAGCTGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIDKPTS*SLSCLL
Trigger: CAACAGGCAGCTTAGACTCAAACTGGTTGGCTTATC...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTTCCCCTGCTCCACCTaGAAGTTTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCFPCST*KFLFNP
Trigger: TGGGTTGAATAAAAACTTCAAGGTGGAGCAGGGGAA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTCCCTCCCCATGTTCTaGTTCTTAGTTTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCASLPMF*FLVSSS
Trigger: GGAAGAAGAAACTAAGAACAAGAACATGGGGAGGGA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTATAGTGCTGGTCACTTaGTTAGCACCAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAIVLVT*LAPGLE
Trigger: TTCAAGACCTGGTGCTAACAAAGTGACCAGCACTAT...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTCCTGCTCCAGCAGGTaGGTGAAGTCGTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSCSSR*VKSSLL
Trigger: CAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAAGTTTGTTGAGCCGCTaGGCGTTTTCCTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFISLLSR*AFSFSL
Trigger: CAAAGAAAAGGAAAACGCCAAGCGGCTCAACAAACT...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGAGCTCATCCCTCTCCTaGGTCAGACTATACACCTTT +
Preference number: 5 (lower is better)
Translates to: PNLSHEDTEGFITRELHWSSSLS*VRLYTF
Trigger: AAAGGTGTATAGTCTGACCAAGGAGAGGGATGAGCT...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAAGTTCCCTGATTTTATaGTCTTCCGGGCAGGTGAAC +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSSLIL*SSGQVN
Trigger: GTTCACCTGCCCGGAAGACAATAAAATCAGGGAACT...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTTTGTTCTTGGCCATTaGGTGCTTAATTTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCFVLGH*VLNFLE
Trigger: CTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTGTTTCCACAGCAGCAGTAGCATCCTTACAACATACCCCCTTAGCCACTGCCTCTATGGCTTTGTTCTaGGCCATTTGGTGCTTAATT +
Preference number: 5 (lower is better)
Translates to: FVSTAAVASLQHTPLATASMALF*AIWCLI
Trigger: AATTAAGCACCAAATGGCCAAGAACAAAGCCATAGA...GGCAGTGGCTAAGGGGGTATGTTGTAAGGATGCTACTGCTGCTGTGGAAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTTTCTTCCATAAACCTTaGCTGAAGGACCGAATAGTC +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAFFHKP*LKDRIV
Trigger: GACTATTCGGTCCTTCAGCAAAGGTTTATGGAAGAA...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTAGCTCTTTGGTCAGGTaGAGGACCTCCCTCCCCATG +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSSLVR*RTSLPM
Trigger: CATGGGGAGGGAGGTCCTCAACCTGACCAAAGAGCT...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGTAGGATCTGCACTTTaGGGCTTTTGCGACATGACA +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLVGSAL*GFCDMT
Trigger: TGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTAC...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAAGTTTGTTGAGCCGCTaGGCGTTTTCCTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSLLSR*AFSFSL
Trigger: CAAAGAAAAGGAAAACGCCAAGCGGCTCAACAAACT...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp ATCACTGGAGGTCCTAAGGTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTATCTAGTCTAAGTTCCTaGCTGTGGTGTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ITGGPKVFPVNISSMVTLSSLSS*LWCSSS
Trigger: AGAGGAAGAACACCACAGCAAGGAACTTAGACTAGA...TAAAGTCACCATGCTACTGATGTTGACTGGAAACACCTTAGGACCTCCAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp TTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTGCTCACCTTCCTCTCTTCTaGCTTTATTTTCTCCATCAT +
Preference number: 5 (lower is better)
Translates to: FPVNISSMVTLAMTVGCAHLPLF*LYFLHH
Trigger: ATGATGGAGAAAATAAAGCAAGAAGAGAGGAAGGTG...AGCACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp GTGTTTCCAGTCAACATCAGTAGCATGGTGACTTTAGCGATGACTGTGGGCTGTTCTATGGCTTTGTTCTaGGCCATTTGGTGCTTAATT +
Preference number: 5 (lower is better)
Translates to: VFPVNISSMVTLAMTVGCSMALF*AIWCLI
Trigger: AATTAAGCACCAAATGGCCAAGAACAAAGCCATAGA...ACAGCCCACAGTCATCGCTAAAGTCACCATGCTACTGATGTTGACTGGAAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239133.2
CDS-3UTR CAA 90 bp AAGCATGGAACGTGGTCCCCAAATCTCTCTCATGAAGATACTGAGGGCTTCATATTCTTCCATAAACCTTaGCTGAAGGACCGAATAGTC +
Preference number: 5 (lower is better)
Translates to: KHGTWSPNLSHEDTEGFIFFHKP*LKDRIV
Trigger: GACTATTCGGTCCTTCAGCAAAGGTTTATGGAAGAA...TATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGGGGACCACGTTCCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTCTTCCTGGAAGGATTaGCGGATGAACACAGCCGGG +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFSSWKD*RMNTAG
Trigger: CCCGGCTGTGTTCATCCGCAAATCCTTCCAGGAAGA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTGAAAACCTCGAGGCCTaGTGTTCGAAGTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFENLEA*CSKSTS
Trigger: GGAAGTGGACTTCGAACACAAGGCCTCGAGGTTTTC...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCGCTGGGAGAGGAAATTaGCCTTATCCTGCTCGGTTC +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVAGRGN*PYPARF
Trigger: GAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGC...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGTTTGTTCTTGGCCATTaGGTGCTTAATTTCCTCGAG +
Preference number: 5 (lower is better)
Translates to: PNLSHEDTEGFITRELHWFVLGH*VLNFLE
Trigger: CTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAA...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTAAGTCCACTTCCAACTaGAGCAGTTTCTGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFKSTSN*SSFWRS
Trigger: AGACCGCCAGAAACTGCTCAAGTTGGAAGTGGACTT...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTCTTGGTTAGCCAACTaGGCGTTCATCTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVSWLAN*AFISSC
Trigger: GCACGAAGAGATGAACGCCAAGTTGGCTAACCAAGA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCCCTGTTGTGAGACTCTaGGTTAGCCAACTTGGCGTT +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVPVVRL*VSQLGV
Trigger: AACGCCAAGTTGGCTAACCAAGAGTCTCACAACAGG...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCAAATCTCTCTCATGAAGATACTGAGGGCTTCATAACTCGTGAGCTACATTGGCACCTTCCTCTCTTCTaGCTTTATTTTCTCCATCAT +
Preference number: 5 (lower is better)
Translates to: PNLSHEDTEGFITRELHWHLPLF*LYFLHH
Trigger: ATGATGGAGAAAATAAAGCAAGAAGAGAGGAAGGTG...CCAATGTAGCTCACGAGTTATGAAGCCCTCAGTATCTTCATGAGAGAGATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTACTTCCGCATGGGGGTaGGAACAGTTTGTTTTTCCG +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFTSAWG*EQFVFP
Trigger: CGGAAAAACAAACTGTTCCAACCCCCATGCGGAAGT...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCATGAGTGCGAAGGACTaGAGTTTCACAAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVMSAKD*SFTSSS
Trigger: GGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCAT...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTTGCCTTGTTCTTTTTaGCATCTTCTGAGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVLPCSF*HLLRVP
Trigger: AGGGACCCTCAGAAGATGCAAAAAAGAACAAGGCAA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp CCACTTTATTGCATGTTCAAATTGTTTCCTGAAGTCATATTAGGGGCTTTTGTCTCTAGTCTAAGTTCCTaGCTGTGGTGTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLYCMFKLFPEVILGAFVSSLSS*LWCSSS
Trigger: AGAGGAAGAACACCACAGCAAGGAACTTAGACTAGA...GACAAAAGCCCCTAATATGACTTCAGGAAACAATTTGAACATGCAATAAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTTTCCCCTGCTCCACCTaGAAGTTTTTATTCAACCCA +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFFPCST*KFLFNP
Trigger: TGGGTTGAATAAAAACTTCAAGGTGGAGCAGGGGAA...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS-3UTR CAA 90 bp GAAACAAATGCACAAAATAGAGAGGAAAGCCGCAAGGCTATTAGATGGTTATTTATAGTGCTGGTCACTTaGTTAGCACCAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: ETNAQNREESRKAIRWLFIVLVT*LAPGLE
Trigger: TTCAAGACCTGGTGCTAACAAAGTGACCAGCACTAT...AAATAACCATCTAATAGCCTTGCGGCTTTCCTCTCTATTTTGTGCATTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS CCA 72 bp CCAGCTCGCCAGGGTGCCCTGTACCCTGGTTTGGCCTaGGCCCTTTCTCCTGGGGAGCTGAGGGTCCGTTTT +
Preference number: 6 (lower is better)
Translates to: PARQGALYPGLA*ALSPGELRVRF
Trigger: AAAACGGACCCTCAGCTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp CAGGTGTCACACGGATGTGCAAGGGCTGGCCCTGCTTaGGTGCTAGGACCAGCTCGCCAGGGTGCCCTGTAC +
Preference number: 6 (lower is better)
Translates to: QVSHGCARAGPA*VLGPARQGALY
Trigger: GTACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCTTGCACATCCGTGTGACACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GCTTGGGTGCTAGGACCAGCTCGCCAGGGTGCCCTGTACCCTGGTTaGGCCTGGGCCCTTTCTCCTGGGGAGCTGAGGGTCCGTTTTCTC +
Preference number: 6 (lower is better)
Translates to: AWVLGPARQGALYPG*AWALSPGELRVRFL
Trigger: GAGAAAACGGACCCTCAGCTCCCCAGGAGAAAGGGCCCAGGCCAAACCAGGGTACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp TCAGGTGTCACACGGATGTGCAAGGGCTGGCCCTGCTaGGGTGCTAGGACCAGCTCGCCAGGGTGCCCTGTA +
Preference number: 6 (lower is better)
Translates to: SGVTRMCKGWPC*GARTSSPGCPV
Trigger: TACAGGGCACCCTGGCGAGCTGGTCCTAGCACCCAAGCAGGGCCAGCCCTTGCACATCCGTGTGACACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp TCAGGGGGCGCTGCAGACGTTGACACCGTCATTATCTaGATGGGGGATGCAGGCCTGTCTGCAAACGCGCCC +
Preference number: 6 (lower is better)
Translates to: SGGAADVDTVII*MGDAGLSANAP
Trigger: GGGCGCGTTTGCAGACAGGCCTGCATCCCCCATCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GGGCTTGTGATCTCCAGGGTGGCAGTGCTGTTCTCGTaGTCAGGTGTCACACGGATGTGCAAGGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: GLVISRVAVLFS*SGVTRMCKGWP
Trigger: GGGCCAGCCCTTGCACATCCGTGTGACACCTGATCACGAGAACAGCACTGCCACCCTGGAGATCACAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp CCGGACCGTGATAACTGGACTCACGCCTTCCGCTGCTaGAGGCCCGGGAGATCGCTTAAACTGAGAACCCAG +
Preference number: 6 (lower is better)
Translates to: PDRDNWTHAFRC*RPGRSLKLRTQ
Trigger: CTGGGTTCTCAGTTTAAGCGATCTCCCGGGCCTGCAGCAGCGGAAGGCGTGAGTCCAGTTATCACGGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp AGGCCGGACCGTGATAACTGGACTCACGCCTTCCGCTaGTGCAGGCCCGGGAGATCGCTTAAACTGAGAACC +
Preference number: 6 (lower is better)
Translates to: RPDRDNWTHAFR*CRPGRSLKLRT
Trigger: GGTTCTCAGTTTAAGCGATCTCCCGGGCCTGCAGCAGCGGAAGGCGTGAGTCCAGTTATCACGGTCCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GTACGTCCACCATCCTTCGGCCATTTCCACTCGGCCTaGGAGCTCGGCTGTAGCGCTTGGAAAGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: VRPPSFGHFHSA*ELGCSAWKAPA
Trigger: AGCTGGAGCTTTCCAAGCGCTACAGCCGAGCTCTCAGGCCGAGTGGAAATGGCCGAAGGATGGTGGACGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp CACCGTCATTATCTGGATGGGGGATGCAGGCCTGTCTaGAAACGCGCCCCTTCCACCTTCTGGGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: HRHYLDGGCRPV*KRAPSTFWALL
Trigger: GAGAAGAGCCCAGAAGGTGGAAGGGGCGCGTTTGCAGACAGGCCTGCATCCCCCATCCAGATAATGACGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp CAGGAGAGACAGCGATTTCAGGGGGCGCTGCAGACGTaGACACCGTCATTATCTGGATGGGGGATGCAGGCC +
Preference number: 6 (lower is better)
Translates to: QERQRFQGALQT*TPSLSGWGMQA
Trigger: GGCCTGCATCCCCCATCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCCCTGAAATCGCTGTCTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GAGCGAAGGACTGTGCCCGTAGAAACCTCCTTCTCGGCTGTTACGTaGACAGGCCGGACCGTGATAACTGGACTCACGCCTTCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: ERRTVPVETSFSAVT*TGRTVITGLTPSAA
Trigger: AGCAGCGGAAGGCGTGAGTCCAGTTATCACGGTCCGGCCTGTCAACGTAACAGCCGAGAAGGAGGTTTCTACGGGCACAGTCCTTCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp CCTGAGAGTCAGGAGAGACAGCGATTTCAGGGGGCGCTGCAGACGTaGACACCGTCATTATCTGGATGGGGGATGCAGGCCTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: PESQERQRFQGALQT*TPSLSGWGMQACLQ
Trigger: TTGCAGACAGGCCTGCATCCCCCATCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCCCTGAAATCGCTGTCTCTCCTGACTCTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp AGGAGAGACAGCGATTTCAGGGGGCGCTGCAGACGTTaGCACCGTCATTATCTGGATGGGGGATGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: RRDSDFRGRCRR*HRHYLDGGCRP
Trigger: AGGCCTGCATCCCCCATCCAGATAATGACGGTGTCAACGTCTGCAGCGCCCCCTGAAATCGCTGTCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TCGGTCTTCATCAAGTCCCCCTCCACCACCTCCAGCTaGTGGAGCCGCTTCTTCAGTCTCTCGATTTCAAGC +
Preference number: 6 (lower is better)
Translates to: SVFIKSPSTTSS*WSRFFSLSISS
Trigger: GCTTGAAATCGAGAGACTGAAGAAGCGGCTCCAGCAGCTGGAGGTGGTGGAGGGGGACTTGATGAAGACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp CAGGTGAACTCAGACCCCTTGCACAGCCTGCCTCGGTaGATTTCCCTCTCCACCTCCTCTATGCCATCAAGC +
Preference number: 6 (lower is better)
Translates to: QVNSDPLHSLPR*ISLSTSSMPSS
Trigger: GCTTGATGGCATAGAGGAGGTGGAGAGGGAAATCAACCGAGGCAGGCTGTGCAAGGGGTCTGAGTTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp ACTGTGCCCGTAGAAACCTCCTTCTCGGCTGTTACGTaGACAGGCCGGACCGTGATAACTGGACTCACGCCT +
Preference number: 6 (lower is better)
Translates to: TVPVETSFSAVT*TGRTVITGLTP
Trigger: AGGCGTGAGTCCAGTTATCACGGTCCGGCCTGTCAACGTAACAGCCGAGAAGGAGGTTTCTACGGGCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp CGCAGCTCGGCTTCCTGGCTCACAGCCTCCCCTTTCTCTATGGCTTaGTTCTTGGCCATTTGGTGCTTAATTTCCTCGAGCTGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RSSASWLTASPFSMA*FLAIWCLISSSCWE
Trigger: CTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGCTGTGAGCCAGGAAGCCGAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp ATCGCGGTGCAGGACTCGAAGCACTTTCTCTGGTTCTaGAGATCCATAATGCGCCTCCAGAACCTCGGGCTT +
Preference number: 6 (lower is better)
Translates to: IAVQDSKHFLWF*RSIMRLQNLGL
Trigger: AAGCCCGAGGTTCTGGAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTGCTTCGAGTCCTGCACCGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS GCA 72 bp TGTGCTTGTGCTTCTCGTTTTCCAGCTCGTACACGGTaGGCCTGTGACACTTCTCAGCCAACAGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: CACASRFPARTR*ACDTSQPTAAA
Trigger: AGCAGCTGCTGTTGGCTGAGAAGTGTCACAGGCGCACCGTGTACGAGCTGGAAAACGAGAAGCACAAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CCA 72 bp GATGGCATCGCGGTGCAGGACTCGAAGCACTTTCTCTaGTTCTGCAGATCCATAATGCGCCTCCAGAACCTC +
Preference number: 6 (lower is better)
Translates to: DGIAVQDSKHFL*FCRSIMRLQNL
Trigger: GAGGTTCTGGAGGCGCATTATGGATCTGCAGAACCAGAGAAAGTGCTTCGAGTCCTGCACCGCGATGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CCA 72 bp GTTAGGTTCTTCTCCTTCTCCAGGTTCAAATGGAGCTaGGTGCATTCCGACTTGCTGCGGCTGAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: VRFFSFSRFKWS*VHSDLLRLKAS
Trigger: GGAGGCCTTCAGCCGCAGCAAGTCGGAATGCACCCAGCTCCATTTGAACCTGGAGAAGGAGAAGAACCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp CTGGGGGATACCTGTCGAGGACCGAGGACCGTTCCATaGGTTTCTTCAGGCCTACCTGTCGAAGATTACTCA +
Preference number: 6 (lower is better)
Translates to: LGDTCRGPRTVP*VSSGLPVEDYS
Trigger: TGAGTAATCTTCGACAGGTAGGCCTGAAGAAACCCATGGAACGGTCCTCGGTCCTCGACAGGTATCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp AATCCAAGACTTCCTCATGGTGAGTTCATTGGCGGCTaGGGGATACCTGTCGAGGACCGAGGACCGTTCCAT +
Preference number: 6 (lower is better)
Translates to: NPRLPHGEFIGG*GIPVEDRGPFH
Trigger: ATGGAACGGTCCTCGGTCCTCGACAGGTATCCCCCAGCCGCCAATGAACTCACCATGAGGAAGTCTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp TTTTTCTCACTCTCTCCTGATGGCTTGAGGTGGCGTTaGACGGTTCCGGAAGCCATGACATCATCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: FFSLSPDGLRWR*TVPEAMTSSSP
Trigger: GGGGGAGGATGATGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 72 bp CTGCTCTCCGAGCACTCGAGTTCTTTAACCCGACTCTaGACCACCTCCAGCTCGTTCAGCAGGTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: LLSEHSSSLTRL*TTSSSFSRSLV
Trigger: AACCAAAGACCTGCTGAACGAGCTGGAGGTGGTCAAGAGTCGGGTTAAAGAACTCGAGTGCTCGGAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp ATTTTATTGTCTTCCGGGCAGGTGAACTCAGACCCCTaGCACAGCCTGCCTCGGTTGATTTCCCTCTCCACC +
Preference number: 6 (lower is better)
Translates to: ILLSSGQVNSDP*HSLPRLISLST
Trigger: GGTGGAGAGGGAAATCAACCGAGGCAGGCTGTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACAATAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp TCGATGTGCATCTGCCTCTCATCCACCAGCATGAGTGCGAAGGACTaGAGTTTCACAAGCTCATCCCGAAGTTTGTTGAGCCGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: SMCICLSSTSMSAKD*SFTSSSRSLLSRLA
Trigger: CGCCAAGCGGCTCAACAAACTTCGGGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCATGCTGGTGGATGAGAGGCAGATGCACATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp AGTTCCCTGATTTTATTGTCTTCCGGGCAGGTGAACTCAGACCCCTaGCACAGCCTGCCTCGGTTGATTTCCCTCTCCACCTCCTCTATG +
Preference number: 6 (lower is better)
Translates to: SSLILLSSGQVNSDP*HSLPRLISLSTSSM
Trigger: CATAGAGGAGGTGGAGAGGGAAATCAACCGAGGCAGGCTGTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACAATAAAATCAGGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp CTCCAGAGGCTTCTTAGTCTTTTTCTCACTCTCTCCTaGTGGCTTGAGGTGGCGTTTGACGGTTCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: LQRLLSLFLTLS*WLEVAFDGSGS
Trigger: GCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAAGAAGCCTCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS TCA 72 bp TTTTCAACCTCTCTCGCTCCTGCTCCAGCAGGTTGGTaGAGTCGTCGCTCTTGTTCATGTAGTCGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: FSTSLAPAPAGW*SRRSCSCSRCA
Trigger: AGCACACCGACTACATGAACAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGAGCGAGAGAGGTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS TCA 72 bp CAAGCACGCGCTTGCGCAGACTTTCCACTTCCGCCATaGGACTGGAGTTTCCACATTCCCCTTTGGCAATTT +
Preference number: 6 (lower is better)
Translates to: QARACADFPLPP*DWSFHIPLWQF
Trigger: AAATTGCCAAAGGGGAATGTGGAAACTCCAGTCTCATGGCGGAAGTGGAAAGTCTGCGCAAGCGCGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GTAACTTTGAGGATAGTCCTTCCCATAGGCACTTCCTaGGAGTCAGGAGAGACAGCGATTTCAGGGGGCGCT +
Preference number: 6 (lower is better)
Translates to: VTLRIVLPIGTS*ESGETAISGGA
Trigger: AGCGCCCCCTGAAATCGCTGTCTCTCCTGACTCTCAGGAAGTGCCTATGGGAAGGACTATCCTCAAAGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TCTTGCTCAAGGAGCTTTTTCAACCTCTCTCGCTCCTaGTCCAGCAGGTTGGTGAAGTCGTCGCTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: SCSRSFFNLSRS*SSRLVKSSLLF
Trigger: GAACAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGAGCGAGAGAGGTTGAAAAAGCTCCTTGAGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS GCA 72 bp CTCGATGTGCATCTGCCTCTCATCCACCAGCATGAGTaGGAAGGACTTGAGTTTCACAAGCTCATCCCGAAG +
Preference number: 6 (lower is better)
Translates to: LDVHLPLIHQHE*EGLEFHKLIPK
Trigger: CTTCGGGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCATGCTGGTGGATGAGAGGCAGATGCACATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp GACTCTTGGTTAGCCAACTTGGCGTTCATCTCTTCGTaGTCCTGGGAAAACCTCGAGGCCTTGTGTTCGAAG +
Preference number: 6 (lower is better)
Translates to: DSWLANLAFISS*SWENLEALCSK
Trigger: CTTCGAACACAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGCCAAGTTGGCTAACCAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp TGGTTAGCCAACTTGGCGTTCATCTCTTCGTGCTCCTaGGAAAACCTCGAGGCCTTGTGTTCGAAGTCCACT +
Preference number: 6 (lower is better)
Translates to: WLANLAFISSCS*ENLEALCSKST
Trigger: AGTGGACTTCGAACACAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGCCAAGTTGGCTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp GCCTTATCCTGCTCGGTTCTGAATTTCTGCTCCAACTaGTCGTATTCGTCCTCGGTCTTCATCAAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: ALSCSVLNFCSN*SYSSSVFIKSP
Trigger: GGGGGACTTGATGAAGACCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp AACTTGGCGTTCATCTCTTCGTGCTCCTGGGAAAACCTCGAGGCCTaGTGTTCGAAGTCCACTTCCAACTTGAGCAGTTTCTGGCGGTCT +
Preference number: 6 (lower is better)
Translates to: NLAFISSCSWENLEA*CSKSTSNLSSFWRS
Trigger: AGACCGCCAGAAACTGCTCAAGTTGGAAGTGGACTTCGAACACAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGCCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GTCTTAGTGATCTCTTCATCCTTGCCCTCCATCTCAAGCACGCGCTaGCGCAGACTTTCCACTTCCGCCATGAGACTGGAGTTTCCACAT +
Preference number: 6 (lower is better)
Translates to: VLVISSSLPSISSTR*RRLSTSAMRLEFPH
Trigger: ATGTGGAAACTCCAGTCTCATGGCGGAAGTGGAAAGTCTGCGCAAGCGCGTGCTTGAGATGGAGGGCAAGGATGAAGAGATCACTAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp TTCTCCAGTCTGCTCTCCGAGCACTCGAGTTCTTTAACCCGACTCTaGACCACCTCCAGCTCGTTCAGCAGGTCTTTGGTTAGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: FSSLLSEHSSSLTRL*TTSSSFSRSLVRFF
Trigger: GAAGAACCTAACCAAAGACCTGCTGAACGAGCTGGAGGTGGTCAAGAGTCGGGTTAAAGAACTCGAGTGCTCGGAGAGCAGACTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp CGCTTCTTCAGTCTCTCGATTTCAAGCGTCAGTTCCCTGATTTTATaGTCTTCCGGGCAGGTGAACTCAGACCCCTTGCACAGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: RFFSLSISSVSSLIL*SSGQVNSDPLHSLP
Trigger: AGGCAGGCTGTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACAATAAAATCAGGGAACTGACGCTTGAAATCGAGAGACTGAAGAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp TCGGCTTCCTGGCTCACAGCCTCCCCTTTCTCTATGGCTTTGTTCTaGGCCATTTGGTGCTTAATTTCCTCGAGCTGCTGGGAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: SASWLTASPFSMALF*AIWCLISSSCWERK
Trigger: TTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGCTGTGAGCCAGGAAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GTGGATGACGTTGTGACCGGGGTTATGGTTATAGTGCTGGTCACTTaGTTAGCACCAGGTCTTGAAGAGAGGTGGTTCCTGGGAGAGCGA +
Preference number: 6 (lower is better)
Translates to: VDDVVTGVMVIVLVT*LAPGLEERWFLGER
Trigger: TCGCTCTCCCAGGAACCACCTCTCTTCAAGACCTGGTGCTAACAAAGTGACCAGCACTATAACCATAACCCCGGTCACAACGTCATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp AACTCCAGAGGCTTCTTAGTCTTTTTCTCACTCTCTCCTGATGGCTaGAGGTGGCGTTTGACGGTTCCGGAAGCCATGACATCATCCTCC +
Preference number: 6 (lower is better)
Translates to: NSRGFLVFFSLSPDG*RWRLTVPEAMTSSS
Trigger: GGAGGATGATGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAAGAAGCCTCTGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 90 bp TGCAGCTCCCCTTCCATGATGCTCAGGAGCTGGATGAGGTCCTCCTaGGATAACTCCAGAGGCTTCTTAGTCTTTTTCTCACTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: CSSPSMMLRSWMRSS*DNSRGFLVFFSLSP
Trigger: AGGAGAGAGTGAGAAAAAGACTAAGAAGCCTCTGGAGTTATCCAAGGAGGACCTCATCCAGCTCCTGAGCATCATGGAAGGGGAGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 90 bp TCTTTAACCCGACTCTTGACCACCTCCAGCTCGTTCAGCAGGTCTTaGGTTAGGTTCTTCTCCTTCTCCAGGTTCAAATGGAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: SLTRLLTTSSSFSRS*VRFFSFSRFKWSWV
Trigger: CACCCAGCTCCATTTGAACCTGGAGAAGGAGAAGAACCTAACCAAAGACCTGCTGAACGAGCTGGAGGTGGTCAAGAGTCGGGTTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp ACAGGGGACATGGCTCGTTCTGGGCCGAGAGTAGGATCTGCACTTTaGGGCTTTTGCGACATGACATTGGGTGATGGAATTATGGTGATC +
Preference number: 6 (lower is better)
Translates to: TGDMARSGPRVGSAL*GFCDMTLGDGIMVI
Trigger: GATCACCATAATTCCATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTACTCTCGGCCCAGAACGAGCCATGTCCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp ACCTCGAGGCCTTGTGTTCGAAGTCCACTTCCAACTTaGGCAGTTTCTGGCGGTCTTCCTTGGACTTGTAAG +
Preference number: 6 (lower is better)
Translates to: TSRPCVRSPLPT*AVSGGLPWTCK
Trigger: CTTACAAGTCCAAGGAAGACCGCCAGAAACTGCTCAAGTTGGAAGTGGACTTCGAACACAAGGCCTCGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GCTGGGAGAGGAAATTTGCCTTATCCTGCTCGGTTCTaGATTTCTGCTCCAACTGGTCGTATTCGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: AGRGNLPYPARF*ISAPTGRIRPR
Trigger: CCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GGTTATAGTGCTGGTCACTTTGTTAGCACCAGGTCTTaGAGAGAGGTGGTTCCTGGGAGAGCGAAGGACTGT +
Preference number: 6 (lower is better)
Translates to: GYSAGHFVSTRS*REVVPGRAKDC
Trigger: ACAGTCCTTCGCTCTCCCAGGAACCACCTCTCTTCAAGACCTGGTGCTAACAAAGTGACCAGCACTATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp GCTCTGAGATGGGTTTCTCATAGACATCTTCTCCTATaGACTTCTCCTGAGCAAGGATGGCATCGCGGTGCA +
Preference number: 6 (lower is better)
Translates to: ALRWVSHRHLLL*TSPEQGWHRGA
Trigger: TGCACCGCGATGCCATCCTTGCTCAGGAGAAGTCCATAGGAGAAGATGTCTATGAGAAACCCATCTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 72 bp GGCTTCTTAGTCTTTTTCTCACTCTCTCCTGATGGCTaGAGGTGGCGTTTGACGGTTCCGGAAGCCATGACA +
Preference number: 6 (lower is better)
Translates to: GFLVFFSLSPDG*RWRLTVPEAMT
Trigger: TGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAAGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 90 bp TTCTTAGTCTTTTTCTCACTCTCTCCTGATGGCTTGAGGTGGCGTTaGACGGTTCCGGAAGCCATGACATCATCCTCCCCCTTCCGATTT +
Preference number: 6 (lower is better)
Translates to: FLVFFSLSPDGLRWR*TVPEAMTSSSPFRF
Trigger: AAATCGGAAGGGGGAGGATGATGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 90 bp TCAGACATCCTCTTCTGCAGCTTCTCCACTTCTAGTCTAAGTTCCTaGCTGTGGTGTTCTTCCTCTTGGAGCTTCTTCTTCAGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SDILFCSFSTSSLSS*LWCSSSWSFFFSSR
Trigger: CCGGGAGCTGAAGAAGAAGCTCCAAGAGGAAGAACACCACAGCAAGGAACTTAGACTAGAAGTGGAGAAGCTGCAGAAGAGGATGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GGGCCGAGAGTAGGATCTGCACTTTTGGGCTTTTGCGACATGACATaGGGTGATGGAATTATGGTGATCCGTGGTTTCTGGTTGCCTAAG +
Preference number: 6 (lower is better)
Translates to: GPRVGSALLGFCDMT*GDGIMVIRGFWLPK
Trigger: CTTAGGCAACCAGAAACCACGGATCACCATAATTCCATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTACTCTCGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp TTTTTCTCATCCAAGGAATCCAAGACTTCCTCATGGTaGGTTCATTGGCGGCTGGGGGATACCTGTCGAGGA +
Preference number: 6 (lower is better)
Translates to: FFSSKESKTSSW*VHWRLGDTCRG
Trigger: TCCTCGACAGGTATCCCCCAGCCGCCAATGAACTCACCATGAGGAAGTCTTGGATTCCTTGGATGAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp CTATGCCATCAAGCCGCTTCTTTAGCAAGTCAACGCTaGAGCTCAGTTCACAGGACCTTTCTTCTTCGCTTC +
Preference number: 6 (lower is better)
Translates to: LCHQAASLASQR*SSVHRTFLLRF
Trigger: GAAGCGAAGAAGAAAGGTCCTGTGAACTGAGCTGCAGCGTTGACTTGCTAAAGAAGCGGCTTGATGGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TCCTCGAGCTGCTGGGAGAGGAAATTTGCCTTATCCTaGTCGGTTCTGAATTTCTGCTCCAACTGGTCGTAT +
Preference number: 6 (lower is better)
Translates to: SSSCWERKFALS*SVLNFCSNWSY
Trigger: ATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp TTAGTCTTTTTCTCACTCTCTCCTGATGGCTTGAGGTaGCGTTTGACGGTTCCGGAAGCCATGACATCATCC +
Preference number: 6 (lower is better)
Translates to: LVFFSLSPDGLR*RLTVPEAMTSS
Trigger: GGATGATGTCATGGCTTCCGGAACCGTCAAACGCCACCTCAAGCCATCAGGAGAGAGTGAGAAAAAGACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CCA 72 bp GCCTCCCCTTTCTCTATGGCTTTGTTCTTGGCCATTTaGTGCTTAATTTCCTCGAGCTGCTGGGAGAGGAAA +
Preference number: 6 (lower is better)
Translates to: ASPFSMALFLAI*CLISSSCWERK
Trigger: TTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp GCGAAGGACTTGAGTTTCACAAGCTCATCCCGAAGTTaGTTGAGCCGCTTGGCGTTTTCCTTTTCTTTGCGG +
Preference number: 6 (lower is better)
Translates to: AKDLSFTSSSRS*LSRLAFSFSLR
Trigger: CCGCAAAGAAAAGGAAAACGCCAAGCGGCTCAACAAACTTCGGGATGAGCTTGTGAAACTCAAGTCCTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp ATCTGCCTCTCATCCACCAGCATGAGTGCGAAGGACTaGAGTTTCACAAGCTCATCCCGAAGTTTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: ICLSSTSMSAKD*SFTSSSRSLLS
Trigger: GCTCAACAAACTTCGGGATGAGCTTGTGAAACTCAAGTCCTTCGCACTCATGCTGGTGGATGAGAGGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp AGTCTCTCGATTTCAAGCGTCAGTTCCCTGATTTTATaGTCTTCCGGGCAGGTGAACTCAGACCCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: SLSISSVSSLIL*SSGQVNSDPLH
Trigger: GTGCAAGGGGTCTGAGTTCACCTGCCCGGAAGACAATAAAATCAGGGAACTGACGCTTGAAATCGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp ATGGCTCGTTCTGGGCCGAGAGTAGGATCTGCACTTTaGGGCTTTTGCGACATGACATTGGGTGATGGAATT +
Preference number: 6 (lower is better)
Translates to: MARSGPRVGSAL*GFCDMTLGDGI
Trigger: AATTCCATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTACTCTCGGCCCAGAACGAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TCGATTAGCTTCTCCGTCACATCCATCACCTTCCCCTaGTCCACCTTGAAGTTTTTATTCAACCCATCCACC +
Preference number: 6 (lower is better)
Translates to: SISFSVTSITFP*STLKFLFNPST
Trigger: GGTGGATGGGTTGAATAAAAACTTCAAGGTGGAGCAGGGGAAGGTGATGGATGTGACGGAGAAGCTAATCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TTGTTCATCAGCTCGTGGATCTTCTCTTTAAGAGCCTaGACCTCAGCCTGTAAGTCACGACTTTTAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LFISSWIFSLRA*TSACKSRLLAS
Trigger: GGAGGCTAAAAGTCGTGACTTACAGGCTGAGGTGCAGGCTCTTAAAGAGAAGATCCACGAGCTGATGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp TTCTTGGCCATTTGGTGCTTAATTTCCTCGAGCTGCTaGGAGAGGAAATTTGCCTTATCCTGCTCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: FLAIWCLISSSC*ERKFALSCSVL
Trigger: CAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CCA 72 bp ACATTGGGTGATGGAATTATGGTGATCCGTGGTTTCTaGTTGCCTAAGGTAGGAATGACGGTGGTACTCGAG +
Preference number: 6 (lower is better)
Translates to: TLGDGIMVIRGF*LPKVGMTVVLE
Trigger: CTCGAGTACCACCGTCATTCCTACCTTAGGCAACCAGAAACCACGGATCACCATAATTCCATCACCCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp CCTTCCATGATGCTCAGGAGCTGGATGAGGTCCTCCTaGGATAACTCCAGAGGCTTCTTAGTCTTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: PSMMLRSWMRSS*DNSRGFLVFFS
Trigger: TGAGAAAAAGACTAAGAAGCCTCTGGAGTTATCCAAGGAGGACCTCATCCAGCTCCTGAGCATCATGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093811.11
ENSMUST00000172973.2
ENSMUST00000239133.2
CDS CAA 72 bp AAGGACTTGAGTTTCACAAGCTCATCCCGAAGTTTGTaGAGCCGCTTGGCGTTTTCCTTTTCTTTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: KDLSFTSSSRSL*SRLAFSFSLRA
Trigger: AGCCCGCAAAGAAAAGGAAAACGCCAAGCGGCTCAACAAACTTCGGGATGAGCTTGTGAAACTCAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp AACCAGTTTGAGTCTAAGCTGCCTGTTGTGAGACTCTaGGTTAGCCAACTTGGCGTTCATCTCTTCGTGCTC +
Preference number: 6 (lower is better)
Translates to: NQFESKLPVVRL*VSQLGVHLFVL
Trigger: GAGCACGAAGAGATGAACGCCAAGTTGGCTAACCAAGAGTCTCACAACAGGCAGCTTAGACTCAAACTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp GATAAGCCAACCAGTTTGAGTCTAAGCTGCCTGTTGTaGGACTCTTGGTTAGCCAACTTGGCGTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: DKPTSLSLSCLL*DSWLANLAFIS
Trigger: AGAGATGAACGCCAAGTTGGCTAACCAAGAGTCTCACAACAGGCAGCTTAGACTCAAACTGGTTGGCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp AGGAAATTTGCCTTATCCTGCTCGGTTCTGAATTTCTaGTCCAACTGGTCGTATTCGTCCTCGGTCTTCATC +
Preference number: 6 (lower is better)
Translates to: RKFALSCSVLNF*SNWSYSSSVFI
Trigger: GATGAAGACCGAGGACGAATACGACCAGTTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp GTGCTTAATTTCCTCGAGCTGCTGGGAGAGGAAATTTaGCTTATCCTGCTCGGTTCTGAATTTCTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: VLNFLELLGEEI*LILLGSEFLLQ
Trigger: TTGGAGCAGAAATTCAGAACCGAGCAGGATAAGGCAAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp TTGGGTGATGGAATTATGGTGATCCGTGGTTTCTGGTaGCCTAAGGTAGGAATGACGGTGGTACTCGAGAAA +
Preference number: 6 (lower is better)
Translates to: LGDGIMVIRGFW*PKVGMTVVLEK
Trigger: TTTCTCGAGTACCACCGTCATTCCTACCTTAGGCAACCAGAAACCACGGATCACCATAATTCCATCACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp GTAGGATCTGCACTTTTGGGCTTTTGCGACATGACATaGGGTGATGGAATTATGGTGATCCGTGGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: VGSALLGFCDMT*GDGIMVIRGFW
Trigger: CCAGAAACCACGGATCACCATAATTCCATCACCCAATGTCATGTCGCAAAAGCCCAAAAGTGCAGATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 90 bp GACATGACATTGGGTGATGGAATTATGGTGATCCGTGGTTTCTGGTaGCCTAAGGTAGGAATGACGGTGGTACTCGAGAAAAACTCTTCA +
Preference number: 6 (lower is better)
Translates to: DMTLGDGIMVIRGFW*PKVGMTVVLEKNSS
Trigger: TGAAGAGTTTTTCTCGAGTACCACCGTCATTCCTACCTTAGGCAACCAGAAACCACGGATCACCATAATTCCATCACCCAATGTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp AGACTTTTATTGGTCTCTTCCAGTTCCTCGATCCTTTaGGATAAGCCAACCAGTTTGAGTCTAAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: RLLLVSSSSSIL*DKPTSLSLSCL
Trigger: CAGGCAGCTTAGACTCAAACTGGTTGGCTTATCGCAAAGGATCGAGGAACTGGAAGAGACCAATAAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS GCA 72 bp TCCCCTTTCTCTATGGCTTTGTTCTTGGCCATTTGGTaGTTAATTTCCTCGAGCTGCTGGGAGAGGAAATTT +
Preference number: 6 (lower is better)
Translates to: SPFSMALFLAIW*LISSSCWERKF
Trigger: AAATTTCCTCTCCCAGCAGCTCGAGGAAATTAAGCACCAAATGGCCAAGAACAAAGCCATAGAGAAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS TCA 72 bp CTGGCTGCAGATTTCTTCAGCTCTATTTTCATAGACTaGGTCTCAGCTCGAGGCTGGAATTTGGTCAGATTT +
Preference number: 6 (lower is better)
Translates to: LAADFFSSIFID*VSARGWNLVRF
Trigger: AAATCTGACCAAATTCCAGCCTCGAGCTGAGACTCAGTCTATGAAAATAGAGCTGAAGAAATCTGCAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093811.11
CDS CAA 90 bp CTTTCTTCTTCGCTTCTCAGTTTACCCATCAGCTCATCCCTCTCCTaGGTCAGACTATACACCTTTTCCTCCATTTCAGACTTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: LSSSLLSLPISSSLS*VRLYTFSSISDLSF
Trigger: AAAACTCAAGTCTGAAATGGAGGAAAAGGTGTATAGTCTGACCAAGGAGAGGGATGAGCTGATGGGTAAACTGAGAAGCGAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2
CDS CAA 72 bp TTATTGTCTTCCGTGGTGATGATATTCGCATTGGCATaGTACTTCCGCATGGGGGTTGGAACAGTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: LLSSVVMIFALA*YFRMGVGTVCF
Trigger: AAAACAAACTGTTCCAACCCCCATGCGGAAGTACAATGCCAATGCGAATATCATCACCACGGAAGACAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093811.11
ENSMUST00000239133.2