Pregenerated sensors for FIGNL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095440Ensembl transcript IDs: ENSMUST00000178140.2, ENSMUST00000213610.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATaGCCCCCAACATTGCTAGGGCTAGACCCGCCCTGCCATCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GRCALPCAPSLDSLV*PPTLLGLDPPCHPA Trigger: GGCAGGATGGCAGGGCGGGTCTAGCCCTAGCAATGTTGGGGGGCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR GCA 90 bp | GGGAAGAATGGTAAGAAGGCAGCAAGCAGCACCCCCTGGAGCCTCTaGCCCATCCTCTTGCTTGCAAGCTGGGCCTGGGGAGAAAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GKNGKKAASSTPWSL*PILLLASWAWGESP Trigger: GGGGCTTTCTCCCCAGGCCCAGCTTGCAAGCAAGAGGATGGGGCAGAGGCTCCAGGGGGTGCTGCTTGCTGCCTTCTTACCATTCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR TCA 90 bp | ACATTGCTAGGGCTAGACCCGCCCTGCCATCCTGCCCCATGCTCGTaGGGTAGGTGCTGCAGCCGGGGGCTGTCTTCTTGTGCAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: TLLGLDPPCHPAPCS*GRCCSRGLSSCAKL Trigger: AAGCTTTGCACAAGAAGACAGCCCCCGGCTGCAGCACCTACCTCACGAGCATGGGGCAGGATGGCAGGGCGGGTCTAGCCCTAGCAATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR GCA 90 bp | GACAAAGGTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTaGCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGC | + |
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Preference number: 1 (lower is better) Translates to: DKGCGEREQEFLRPW*QLMSGMASLPSGDG Trigger: GCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAACCTTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR TCA 90 bp | GCCCCACCGAGGATCATCTGCAGTATCACCCTGGGCCACTTGCTCTaGAGCATCAAGCCCTGTACTTGGTCGGCTGGCTCCAGAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: APPRIICSITLGHLL*SIKPCTWSAGSRER Trigger: CCTCTCTCTGGAGCCAGCCGACCAAGTACAGGGCTTGATGCTTCAGAGCAAGTGGCCCAGGGTGATACTGCAGATGATCCTCGGTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | GAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGTATaGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCCACAATA | + |
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Preference number: 1 (lower is better) Translates to: ESRSSLGPGANSCRV*PVCRAEMANFPSTI Trigger: TATTGTGGACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | AGAGACAAAGGTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTaGTGCCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: RDKGCGEREQEFLRP*CQLMSGMASLPSGD Trigger: ATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAACCTTTGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | CAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTGTaGGGACCCCAGCGGTGGGTCCATGTACTCCTAACCCAGCCCACC | + |
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Preference number: 1 (lower is better) Translates to: QSFQTGNRKSPAKEV*GPQRWVHVLLTQPT Trigger: GGTGGGCTGGGTTAGGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | ACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCAGCTGAATaGACAAGAGCACCCCAACTCTCTGCAAGGTTCACAGACCACCGG | + |
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Preference number: 1 (lower is better) Translates to: TCFQSDGLRTFCPAE*TRAPQLSARFTDHR Trigger: CCGGTGGTCTGTGAACCTTGCAGAGAGTTGGGGTGCTCTTGTCCATTCAGCTGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | AGCACCCAGTTCCCTCCAGGCCCTCAGTTTAGACCCAGAGCTCCATaGGGACAAGTAGACACCCCACACAGAGACACAGAACCCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: STQFPPGPQFRPRAP*GQVDTPHRDTEPFP Trigger: TGGAAAGGGTTCTGTGTCTCTGTGTGGGGTGTCTACTTGTCCCCATGGAGCTCTGGGTCTAAACTGAGGGCCTGGAGGGAACTGGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR TCA 90 bp | CAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCAGCTaGATGGACAAGAGCACCCCAACTCTCTGCAAGGTTCACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: QNLLPVRWPENLLPS*MDKSTPTLCKVHRP Trigger: TGGTCTGTGAACCTTGCAGAGAGTTGGGGTGCTCTTGTCCATTCAGCTGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR GCA 90 bp | AGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGTATGGCCAGTCTaGCGAGCGGAGATGGCGAACTTCCCGTCCACAATAAATAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSLGPGANSCRVWPV*RAEMANFPSTINRK Trigger: TTTCCTATTTATTGTGGACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR GCA 90 bp | CAAGTAGACACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTaGTCTGTCTCGTCACAGGGTGCCTGGCTCCTAGTAGTCAATGTT | + |
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Preference number: 1 (lower is better) Translates to: QVDTPHRDTEPFPGQ*SVSSQGAWLLVVNV Trigger: AACATTGACTACTAGGAGCCAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGTGTCTACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | TACATTCTGCGTCTATCCCAGGGACAGCAGTCTGGGGCTCGGGTCTaGTCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATC | + |
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Preference number: 1 (lower is better) Translates to: YILRLSQGQQSGARV*SFLISPKSLWSGRI Trigger: GATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGACCAGACCCGAGCCCCAGACTGCTGTCCCTGGGATAGACGCAGAATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR CCA 90 bp | CTTATCAAGAGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTaGACTAACGTCACAGGAAAGCACCCAGTTCCCTCCAGGCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LIKRRSRRDVVCREV*TNVTGKHPVPSRPS Trigger: TGAGGGCCTGGAGGGAACTGGGTGCTTTCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCTCTTGATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCGGGCTAGACCCGCCCTaGCATCCTGCCCCATGCTCG | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCGLDPP*HPAPCS Trigger: CGAGCATGGGGCAGGATGGCAGGGCGGGTCTAGCCC...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCCTCTTGCTTGCAAGCTaGGCCTGGGGAGAAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCLLLAS*AWGESP Trigger: GGGGCTTTCTCCCCAGGCCCAGCTTGCAAGCAAGAG...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCTGGGGACCCCAGCGGTaGGTCCATGTACTCCTAACC | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCWGPQR*VHVLLT Trigger: GGTTAGGAGTACATGGACCCACCGCTGGGGTCCCCA...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACAGACCACCGGAAGCTaGGGACTGGGGCCCACGGGG | + |
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Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPQTTGS*GLGPTG Trigger: CCCCGTGGGCCCCAGTCCTCAGCTTCCGGTGGTCTG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCTCACCCTGGGCCACTTaGTCTGAAGCATCAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCSPWAT*SEASSP Trigger: AGGGCTTGATGCTTCAGAGCAAGTGGCCCAGGGTGA...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCTCCAGTCAGATGGCCTaGGAACCTTCTGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSSSQMA*EPSAQL Trigger: CAGCTGGGCAGAAGGTTCTCAGGCCATCTGACTGGA...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCTTGCACCAAAGAGTGTaGAATGGCCTGAGGGGACCA | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCLHQRV*NGLRGP Trigger: TGGTCCCCTCAGGCCATTTCACACTCTTTGGTGCAA...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGACCCCCTGGAGCCTCTaGCCCATCCTCTTGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLTPWSL*PILLLA Trigger: TGCAAGCAAGAGGATGGGGCAGAGGCTCCAGGGGGT...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCCCACCGAGGATCATCTaGAGTATCACCCTGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSPPRII*SITLGH Trigger: GTGGCCCAGGGTGATACTGCAGATGATCCTCGGTGG...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGTCTGCCGAGCGGAGATaGCGAACTTCCCGTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: VAGRESRSSLGPGANSCRSAERR*RTSRPQ Trigger: TTGTGGACGGGAAGTTCGCCATCTCCGCTCGGCAGA...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCCCCCTTCTCAGCCTCTaGGCCAAAAGAACTTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSPLLSL*AKRTSA Trigger: GGCGGAAGTTCTTTTGGCCCAGAGGCTGAGAAGGGG...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCGGAGCAGGAGGGATGTaGTTTGCAGAGAAGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VEGRCALPCAPSLDSLVCGAGGM*FAEKSG Trigger: TCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCC...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGACCCCCTGGAGCCTCTaGCCCATCCTCTTGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQTPWSL*PILLLA Trigger: TGCAAGCAAGAGGATGGGGCAGAGGCTCCAGGGGGT...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGTCTGCCGAGCGGAGATaGCGAACTTCCCGTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLSAERR*RTSRPQ Trigger: TTGTGGACGGGAAGTTCGCCATCTCCGCTCGGCAGA...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCGGAACAGAGACAGCATaGGGAGGGGTCAGTGACACA | + |
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Preference number: 2 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSGTETA*GGVSDT Trigger: TGTGTCACTGACCCCTCCCCATGCTGTCTCTGTTCC...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACCCCATCCTCTTGCTTaGAAGCTGGGCCTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPPHPLA*KLGLGR Trigger: TCTCCCCAGGCCCAGCTTGCAAGCAAGAGGATGGGG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACCAGGGACAGCAGTCTaGGGCTCGGGTCTGGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPPGTAV*GSGLVF Trigger: AAAGACCAGACCCGAGCCCCAGACTGCTGTCCCTGG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACTCTTGCTTGCAAGCTaGGCCTGGGGAGAAAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPLLLAS*AWGESP Trigger: GGGGCTTTCTCCCCAGGCCCAGCTTGCAAGCAAGAG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCATGGGGAGGGGTCAGTaGCACAACCATGAGAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSMGRGQ*HNHEKK Trigger: TTTCTTCTCATGGTTGTGTCACTGACCCCTCCCCAT...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCTGGCATCGATCTGCCTaGCAGAAGCATTTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QLMSGMASLPSGDGELPVWHRSA*QKHFPS Trigger: GGAAGGAAAATGCTTCTGCCAGGCAGATCGATGCCA...GACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGACCTCTGACAGAACCTaGTTCCAGTCAGATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQTSDRT*FQSDGL Trigger: CAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGT...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATCTGCTCCCCAGGGCCCCTTCTCAGCCTCTaGGCCAAAAGAACTTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: SFLISPKSLWSGRICSPGPLLSL*AKRTSA Trigger: GGCGGAAGTTCTTTTGGCCCAGAGGCTGAGAAGGGG...CCCTGGGGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAGTCCAGCCAGACTTGTaGCTAGACCACGTTCACGCC | + |
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Preference number: 2 (lower is better) Translates to: RRSRRDVVCREVWTNVTGVQPDL*LDHVHA Trigger: GGCGTGAACGTGGTCTAGCCACAAGTCTGGCTGGAC...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGGACAAGCACAGAAGGTaGTGGATGGGGACCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AVFLCKASKPGTERAQQRDKHRR*WMGTRR Trigger: CCTTCTGGTCCCCATCCATCACCTTCTGTGCTTGTC...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAACCTTCTGCCCAGCTaGATGGACAAGAGCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: AVFLCKASKPGTERAQQRNLLPS*MDKSTP Trigger: TGGGGTGCTCTTGTCCATTCAGCTGGGCAGAAGGTT...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTCCAGGGACAGCAGTCTaGGGCTCGGGTCTGGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSCAKLPNREQKEPSKGSPGTAV*GSGLVF Trigger: AAAGACCAGACCCGAGCCCCAGACTGCTGTCCCTGG...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTTCCAGTCAGATGGCCTaGGAACCTTCTGCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSCAKLPNREQKEPSKGSSSQMA*EPSAQL Trigger: CAGCTGGGCAGAAGGTTCTCAGGCCATCTGACTGGA...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACATATGGCATCGATCTaGCTGGCAGAAGCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPHMASI*LAEAFS Trigger: GGAAAATGCTTCTGCCAGGCAGATCGATGCCATATG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAAGCCCCAAATCTCTCTaGTCTGGGAGAATCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRSRRDVVCREVWTNVTGSPKSL*SGRICS Trigger: GGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCT...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTCTGCTTCCAGTCAGATaGCCTGAGAACCTTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSCAKLPNREQKEPSKGSLLPVR*PENLLP Trigger: GGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAG...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGAGGTCAGTTTCTTCCTaGGTTGTCAAAATAAAACGA | + |
|
Preference number: 2 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLRSVSS*VVKIKR Trigger: TCGTTTTATTTTGACAACTCAGGAAGAAACTGACCT...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGACATATGGCATCGATCTaGCTGGCAGAAGCATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: RRSRRDVVCREVWTNVTGHMASI*LAEAFS Trigger: GGAAAATGCTTCTGCCAGGCAGATCGATGCCATATG...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCATCAGTGACACAACCATaGGAAGAAAAACTAAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPSVTQP*EEKLSQ Trigger: TTGGCTTAGTTTTTCTTCTCATGGTTGTGTCACTGA...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAACTGAGAAAGTAGAATaGGAAAGGAGGATGTCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RRSRRDVVCREVWTNVTGTEKVE*ERRMSL Trigger: GAGCGACATCCTCCTTTCCCATTCTACTTTCTCAGT...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGGTTTGCAGAGAAGTCTaGACTAACGTCACAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AVFLCKASKPGTERAQQRVCREV*TNVTGK Trigger: CTTTCCTGTGACGTTAGTCCAGACTTCTCTGCAAAC...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTCCAAAGAGTGTGAAATaGCCTGAGGGGACCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSCAKLPNREQKEPSKGSPKSVK*PEGTKE Trigger: CTCTTTGGTCCCCTCAGGCCATTTCACACTCTTTGG...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCAAAACTAAGCCAATACTaGGAAAGTAGAATGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: STSDRTCFQSDGLRTFCPKLSQY*ESRMGK Trigger: CTTTCCCATTCTACTTTCTCAGTATTGGCTTAGTTT...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAAGCAACCTACATTTCTaGGACTTCCCCTCAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: RRSRRDVVCREVWTNVTGSNLHF*DFPSKM Trigger: CATTTTTGAGGGGAAGTCCCAGAAATGTAGGTTGCT...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTTGGCATCGATCTGCCTaGCAGAAGCATTTTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: TGEQPNSNILSEVSFFLSWHRSA*QKHFPS Trigger: GGAAGGAAAATGCTTCTGCCAGGCAGATCGATGCCA...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAACTAAGCCAATACTaGGAAAGTAGAATGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: AVFLCKASKPGTERAQQRKLSQY*ESRMGK Trigger: CTTTCCCATTCTACTTTCTCAGTATTGGCTTAGTTT...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTTCAGTGACACAACCATaGGAAGAAAAACTAAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSCAKLPNREQKEPSKGSSVTQP*EEKLSQ Trigger: TTGGCTTAGTTTTTCTTCTCATGGTTGTGTCACTGA...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTAGCAACCTACATTTCTaGGACTTCCCCTCAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: TGEQPNSNILSEVSFFLSSNLHF*DFPSKM Trigger: CATTTTTGAGGGGAAGTCCCAGAAATGTAGGTTGCT...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCGCCCCATCCTCTTGCTaGCAAGCTGGGCCTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VEGRCALPCAPSLDSLVCAPSSC*QAGPGE Trigger: CTCCCCAGGCCCAGCTTGCAAGCAAGAGGATGGGGC...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | GGTAAGAAGGCAGCAAGCAGCACCCCCTGGAGCCTCTaGCCCATCCTCTTGCTTGCAAGCTGGGCCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKKAASSTPWSL*PILLLASWAWG Trigger: TCCCCAGGCCCAGCTTGCAAGCAAGAGGATGGGGCAGAGGCTCCAGGGGGTGCTGCTTGCTGCCTTCTTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | GCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATaGCCCCCAACATTGCTAGGGCTAGACCCGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPCAPSLDSLV*PPTLLGLDPPC Trigger: GCAGGGCGGGTCTAGCCCTAGCAATGTTGGGGGGCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | TGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTaGCAACTCATGTCGGGTATGGCCAGTCTGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CGEREQEFLRPW*QLMSGMASLPS Trigger: GCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | GGTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTaGTGCCAACTCATGTCGGGTATGGCCAGTCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GCGEREQEFLRP*CQLMSGMASLP Trigger: CGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | GGCCCTGGTGCCAACTCATGTCGGGTATGGCCAGTCTaGCGAGCGGAGATGGCGAACTTCCCGTCCACAATA | + |
|
Preference number: 3 (lower is better) Translates to: GPGANSCRVWPV*RAEMANFPSTI Trigger: TATTGTGGACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | CAACCCAATGTTAGCAGAGGGAGTGGAGGGCCGGTGTaGCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QPNVSRGSGGPV*PPLRSIPGFFG Trigger: ACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCACTCCCTCTGCTAACATTGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | AGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGTATaGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGPGANSCRV*PVCRAEMANFP Trigger: CGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGGCACCAGGGCCTAAGGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | GGGAAGAATGGTAAGAAGGCAGCAAGCAGCACCCCCTaGAGCCTCTGCCCCATCCTCTTGCTTGCAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GKNGKKAASSTP*SLCPILLLASW Trigger: CCAGCTTGCAAGCAAGAGGATGGGGCAGAGGCTCCAGGGGGTGCTGCTTGCTGCCTTCTTACCATTCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCGCTCCAGAGAGAGGCTaGGAGAGAACAAGGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSAPERG*ERTRMK Trigger: CTTCATCCTTGTTCTCTCCAAGCCTCTCTCTGGAGC...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTaGTCTGTCTCGTCACAGGGTGCCTGGCTCCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TPHRDTEPFPGQ*SVSSQGAWLLV Trigger: TACTAGGAGCCAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | CAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTGTaGGGACCCCAGCGGTGGGTCCATGTACTCCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QTGNRKSPAKEV*GPQRWVHVLLT Trigger: GGTTAGGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCACATTCATCACTCCTTaGGCCAAAGACATCACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLMSGMASLPSGDGELPVTFITP*AKDITP Trigger: GGGGGTGATGTCTTTGGCCAAAGGAGTGATGAATGT...GACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCACATTCATCACTCCTTaGGCCAAAGACATCACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSTFITP*AKDITP Trigger: GGGGGTGATGTCTTTGGCCAAAGGAGTGATGAATGT...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | AGGATCATCTGCAGTATCACCCTGGGCCACTTGCTCTaGAGCATCAAGCCCTGTACTTGGTCGGCTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RIICSITLGHLL*SIKPCTWSAGS Trigger: GGAGCCAGCCGACCAAGTACAGGGCTTGATGCTTCAGAGCAAGTGGCCCAGGGTGATACTGCAGATGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | ACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTaGCTGGCTCCTAGTAGTCAATGTTGTGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLSRAVLCLVTG*LAPSSQCCVQP Trigger: TGGCTGGACACAACATTGACTACTAGGAGCCAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | CGTCTATCCCAGGGACAGCAGTCTGGGGCTCGGGTCTaGTCTTTCCTCATTAGCCCCAAATCTCTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLSQGQQSGARV*SFLISPKSLWS Trigger: AGACCAGAGAGATTTGGGGCTAATGAGGAAAGACCAGACCCGAGCCCCAGACTGCTGTCCCTGGGATAGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGCCTCTTAGCCTGTTATaGAGCACCTCTGACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLPLSLL*STSDRT Trigger: GGTTCTGTCAGAGGTGCTCAATAACAGGCTAAGAGG...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | GCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTaGGAACCTTCTGCCCAGCTGAATGGACAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: APLTEPASSQMA*EPSAQLNGQEH Trigger: GTGCTCTTGTCCATTCAGCTGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | TTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTaGCTCCTAGTAGTCAATGTTGTGTCCAGCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: FPGQCSVSSQGA*LLVVNVVSSQT Trigger: AGTCTGGCTGGACACAACATTGACTACTAGGAGCCAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | TTCCCTCCAGGCCCTCAGTTTAGACCCAGAGCTCCATaGGGACAAGTAGACACCCCACACAGAGACACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FPPGPQFRPRAP*GQVDTPHRDTE Trigger: TTCTGTGTCTCTGTGTGGGGTGTCTACTTGTCCCCATGGAGCTCTGGGTCTAAACTGAGGGCCTGGAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTaGACTAACGTCACAGGAAAGCACCCAGTTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRSRRDVVCREV*TNVTGKHPVPS Trigger: GGAGGGAACTGGGTGCTTTCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | GGCTGGCTCCAGAGAGAGGCTTGGAGAGAACAAGGATaGAGGAGACATAGTAGCTCTCCTGTTCACACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GWLQREAWREQG*RRHSSSPVHTP Trigger: AGGAGTGTGAACAGGAGAGCTACTATGTCTCCTTCATCCTTGTTCTCTCCAAGCCTCTCTCTGGAGCCAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | ACGTTCACGCCAGAGGCAATCCTCTTAGCCTGTTATTaGGCACCTCTGACAGAACCTGCTTCCAGTCAGATG | + |
|
Preference number: 3 (lower is better) Translates to: TFTPEAILLACY*APLTEPASSQM Trigger: CATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCTCAATAACAGGCTAAGAGGATTGCCTCTGGCGTGAACGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | GCCATGTCTCTCATGGTATTCTCAGCATCTAGAACATaGAGGGATCTAGGAGCTGTAGGGGCAAGGGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AMSLMVFSASRT*RDLGAVGARGR Trigger: CCTACCCCTTGCCCCTACAGCTCCTAGATCCCTTCATGTTCTAGATGCTGAGAATACCATGAGAGACATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR GCA 72 bp | AGCCTTATCAAGAGAAGGAGCAGGAGGGATGTGGTTTaGAGAGAAGTCTGGACTAACGTCACAGGAAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLIKRRSRRDVV*REVWTNVTGKH Trigger: GTGCTTTCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCTCTTGATAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR TCA 72 bp | GTGTACCTTCTTTGCACCAAAGAGTGTGAAATGGCCTaGGGGGACCAAAGAGCCTTATCAAGAGAAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VYLLCTKECEMA*GDQRALSREGA Trigger: TGCTCCTTCTCTTGATAAGGCTCTTTGGTCCCCTCAGGCCATTTCACACTCTTTGGTGCAAAGAAGGTACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| 3UTR CCA 72 bp | CAAAGAGCCTTATCAAGAGAAGGAGCAGGAGGGATGTaGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QRALSREGAGGM*FAEKSGLTSQE Trigger: TTCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCTCTTGATAAGGCTCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGGGAGCCCAGGACCTTaGGAGGGCCGCCGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAGRESRSSLGPGANSCRGSPGP*EGRRRR Trigger: ACGGCGGCGGCGGCCCTCTCAAGGTCCTGGGCTCCC...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCCTCTAGGGCCGCCTTaGGCGCGCCCTGGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTHVGYGQSAERRWRTSRPLGPP*ARPGPP Trigger: TGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGG...ACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCGCCCGCCTCGGCCGCTaGCTGCTGGCACAACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSARLGR*LLAQLP Trigger: GGGCAGTTGTGCCAGCAGGCAGCGGCCGAGGCGGGC...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | CAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCGCCTTGAGCGCGCCCTaGCCCGCCACATCCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLMSGMASLPSGDGELPVALSAP*PATSAH Trigger: GTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGC...GACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTAGCGCACAGCCCTGCTaGGCCAGCGCCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTHVGYGQSAERRWRTSRSAQPC*ASALCR Trigger: CCTGCAGAGGGCGCTGGCTCAGCAGGGCTGTGCGCT...ACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGGCCCGCCTCGGCCGCTaGCTGCTGGCACAACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLARLGR*LLAQLP Trigger: GGGCAGTTGTGCCAGCAGGCAGCGGCCGAGGCGGGC...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGGCCTTGAGCGCGCCCTaGCCCGCCACATCCGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLALSAP*PATSAH Trigger: GTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGC...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGAGCGCACAGCCCTGCTaGGCCAGCGCCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLSAQPC*ASALCR Trigger: CCTGCAGAGGGCGCTGGCTCAGCAGGGCTGTGCGCT...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGCCACATCCGCCCACTaGACTGGGGGCCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGRESRSSLGPGANSCRATSAH*TGGPQS Trigger: AGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGC...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGGCCGGTGTGCCCTCCCCTGCGCTCCATCCCTGGATTCTTTGGTATGCGCGCTGGCGACCCCCTaGAGGCAACTCCAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEGRCALPCAPSLDSLVCALATP*RQLQLV Trigger: CACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGC...GCATACCAAAGAATCCAGGGATGGAGCGCAGGGGAGGGCACACCGGCCCTCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCGAGCCGGCGACGGAGTaGTGGAGGAGACGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSEPATE*WRRRPG Trigger: ACCTGGACGTCTCCTCCACCACTCCGTCGCCGGCTC...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | CAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCGCGCTGGCGACCCCCTaGAGGCAACTCCAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLMSGMASLPSGDGELPVALATP*RQLQLV Trigger: CACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGC...GACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATCTGCTCCCCAGGGCCGCCGGCCGCGAGGTaGTACCCACCACCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLISPKSLWSGRICSPGPPAAR*YPPPAR Trigger: GCGTGCTGGTGGTGGGTACCACCTCGCGGCCGGCGG...CCCTGGGGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTGGAGGTTGGAGGCTGTaGGGGCGGAAATGTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTHVGYGQSAERRWRTSRGGWRL*GRKCRR Trigger: ACGACGACATTTCCGCCCTCACAGCCTCCAACCTCC...ACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGCCCCCAGAAAAGCCCTaGGTTCCCTGCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQPPEKP*VPCTRA Trigger: CGCCCTGGTGCAGGGAACTCAGGGCTTTTCTGGGGG...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGATCCGCCCACTGCACTaGGGGCCCGCAGTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLIRPLH*GPAVYH Trigger: ATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGAT...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGACCGCCGGCCGCGAGGTaGTACCCACCACCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRDVVCREVWTNVTGPPAAR*YPPPAR Trigger: GCGTGCTGGTGGTGGGTACCACCTCGCGGCCGGCGG...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGCCCGAGAGCCCACCTTaGCTAGAGCAGCCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VAGRESRSSLGPGANSCRPESPP*LEQPPH Trigger: ATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGG...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR TCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTCCTCTAGGGCCGCCTTaGGCGCGCCCTGGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCAKLPNREQKEPSKGSPLGPP*ARPGPP Trigger: TGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGG...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGAGTCTACCATCTTGCTaGTCACCAGCTCCAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAGRESRSSLGPGANSCRSLPSC*SPAPAP Trigger: GGGCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACT...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGACGCGCGCGCCGCAGCTaGCGTCCAGGCAGGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRDVVCREVWTNVTGRARRS*RPGRSV Trigger: TACTGACCTGCCTGGACGGCAGCTGCGGCGCGCGCG...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | CAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGGTGCCTGGAGACGTCCAGGTGCTaGTCTGGCCACTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRHRTLSRAVLCLVTGCLETSRC*SGHWFR Trigger: CCTAAACCAGTGGCCAGAGCAGCACCTGGACGTCTC...CAGGCACCCTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | ATCAGAACAATGAGAGAGGGAGGGTTAAAGCACAGGGTCCAGGAGACAGAGACACGCGCGCGCCGCAGCTaGCGTCCAGGCAGGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRTMREGGLKHRVQETETRARRS*RPGRSV Trigger: TACTGACCTGCCTGGACGGCAGCTGCGGCGCGCGCG...TGTCTCTGTCTCCTGGACCCTGTGCTTTAACCCTCCCTCTCTCATTGTTCTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGACCCCCAGAAAAGCCCTaGGTTCCCTGCACCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRDVVCREVWTNVTGPPEKP*VPCTRA Trigger: CGCCCTGGTGCAGGGAACTCAGGGCTTTTCTGGGGG...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGGAGGAGACGTCCAGGTaGTGCTCTGGCCACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQEETSR*CSGHWF Trigger: AAACCAGTGGCCAGAGCAGCACCTGGACGTCTCCTC...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGAGTCTACCATCTTGCTaGTCACCAGCTCCAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQSLPSC*SPAPAP Trigger: GGGCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACT...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | ACCCCACACAGAGACACAGAACCCTTTCCAGGGCAGTGCTCTGTCTCGTCACAGCGCAGTCTACCATCTTaGTGCTCACCAGCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TPHRDTEPFPGQCSVSSQRSLPS*CSPAPA Trigger: CGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCG...CTGTGACGAGACAGAGCACTGCCCTGGAAAGGGTTCTGTGTCTCTGTGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | ATCAGAACAATGAGAGAGGGAGGGTTAAAGCACAGGGTCCAGGAGACAGAGACAGCCACATCCGCCCACTaGACTGGGGGCCCGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRTMREGGLKHRVQETETATSAH*TGGPQS Trigger: AGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGC...TGTCTCTGTCTCCTGGACCCTGTGCTTTAACCCTCCCTCTCTCATTGTTCTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAGAGCCGGCGACGGAGTaGTGGAGGAGACGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRDVVCREVWTNVTGEPATE*WRRRPG Trigger: ACCTGGACGTCTCCTCCACCACTCCGTCGCCGGCTC...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAACAATGAGAGAGGGAGGGTTAAAGCACAGGGTCCAGGAGACAGAGACATCGGCCGCTGCCTGCTaGCACAACTGCCCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IRTMREGGLKHRVQETETSAAAC*HNCPSS Trigger: CGAGCTGGGGCAGTTGTGCCAGCAGGCAGCGGCCGA...TGTCTCTGTCTCCTGGACCCTGTGCTTTAACCCTCCCTCTCTCATTGTTCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | TCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATCTGCTCCCCAGGGACGAGTCCAGCTCCTTaGAGGGAGCCCGAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLISPKSLWSGRICSPGTSPAP*REPESP Trigger: TGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGT...CCCTGGGGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGGGCAACTCCAACTTGTaGGCCGGCGACGGAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVFLCKASKPGTERAQQRGNSNL*AGDGVV Trigger: CACCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCC...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGAGCAGGAGGGATGTGGTTTGCAGAGAAGTCTGGACTAACGTCACAGGAGGCAACTCCAACTTGTaGGCCGGCGACGGAGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSRRDVVCREVWTNVTGGNSNL*AGDGVV Trigger: CACCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCC...TCCTGTGACGTTAGTCCAGACTTCTCTGCAAACCACATCCCTCCTGCTCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | AGCACCTCTGACAGAACCTGCTTCCAGTCAGATGGCCTGAGAACCTTCTGCCCACGCAGTCTACCATCTTaGTGCTCACCAGCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: STSDRTCFQSDGLRTFCPRSLPS*CSPAPA Trigger: CGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCG...TGGGCAGAAGGTTCTCAGGCCATCTGACTGGAAGCAGGTTCTGTCAGAGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | AAAAACCTGAGTACACCGGTGCATATGGCATCGATCTGCCTGGCAGAAGCATTTTCGGCCGCTGCCTGCTaGCACAACTGCCCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KNLSTPVHMASICLAEAFSAAAC*HNCPSS Trigger: CGAGCTGGGGCAGTTGTGCCAGCAGGCAGCGGCCGA...AAATGCTTCTGCCAGGCAGATCGATGCCATATGCACCGGTGTACTCAGGTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR GCA 90 bp | TCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATCTGCTCCCCAGGGGAGGAGACGTCCAGGTaGTGCTCTGGCCACTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLISPKSLWSGRICSPGEETSR*CSGHWF Trigger: AAACCAGTGGCCAGAGCAGCACCTGGACGTCTCCTC...CCCTGGGGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR TCA 90 bp | AAAAACCTGAGTACACCGGTGCATATGGCATCGATCTGCCTGGCAGAAGCATTTGGAGGTTGGAGGCTGTaGGGGCGGAAATGTCGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLSTPVHMASICLAEAFGGWRL*GRKCRR Trigger: ACGACGACATTTCCGCCCTCACAGCCTCCAACCTCC...AAATGCTTCTGCCAGGCAGATCGATGCCATATGCACCGGTGTACTCAGGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTGAGACGTCCAGGTGCTaGTCTGGCCACTGGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCAKLPNREQKEPSKGSETSRC*SGHWFR Trigger: CCTAAACCAGTGGCCAGAGCAGCACCTGGACGTCTC...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTACGAGTCCAGCTCCTTaGAGGGAGCCCGAGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEQPNSNILSEVSFFLSTSPAP*REPESP Trigger: TGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGT...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CCA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTCCCGAGAGCCCACCTTaGCTAGAGCAGCCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TGEQPNSNILSEVSFFLSPESPP*LEQPPH Trigger: ATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGG...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTGGAAATGTCGTCGTGTaGCCAAGCGTAGTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGEQPNSNILSEVSFFLSGNVVV*PSVVAA Trigger: CGCTGCCACTACGCTTGGGCACACGACGACATTTCC...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | CCAGGCCGGCTCCGCGCAGGCGCAGCAGCGTGGCACCTAGTCGGGTaGCGAGGCAGCGCCCCAGCAGCGCCTTACCGCAGCCGCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRLRAGAAAWHLVG*RGSAPAAPYRSRGA Trigger: GGCCCCGCGGCTGCGGTAAGGCGCTGCTGGGGCGCTGCCTCGCCACCCGACTAGGTGCCACGCTGCTGCGCCTGCGCGGAGCCGGCCTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | AGCCGGACGCCAGGTACCCGCCTCCGTAGCCCGCCGCGTACTCAGTaGCCGCCGACGGTCCCCCGCACGCGTTGCCCGTGTACAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRTPGTRLRSPPRTQ*PPTVPRTRCPCTAA Trigger: AGCCGCTGTACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACGCGGCGGGCTACGGAGGCGGGTACCTGGCGTCCGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS TCA 90 bp | CAAAGGGCTCGAGCTGCGGCGCGTAGGCGGGGGAGCCCAGGACCTTaGGAGGGCCGCCGCCGCCGTACTTGCCGGTCCCATCCTCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QRARAAARRRGSPGP*EGRRRRTCRSHPPS Trigger: CGACGGAGGATGGGACCGGCAAGTACGGCGGCGGCGGCCCTCTCAAGGTCCTGGGCTCCCCCGCCTACGCGCCGCAGCTCGAGCCCTTTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | AGGCGCCGTCGGCCGCGGGGGCCTTGGCCGGCTCGTAAGCGTACTTaGGGTAGCGGGCTTCCGCGCCCTCGTCCACCGCCTTGCGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRRRPRGPWPARKRT*GSGLPRPRPPPCAS Trigger: TGAAGCGCAAGGCGGTGGACGAGGGCGCGGAAGCCCGCTACCGCAAGTACGCTTACGAGCCGGCCAAGGCCCCCGCGGCCGACGGCGCCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | CGGTCCCATCCTCCGTCGCCCCGGGTGGCTTCGAACGGAACCCGTTaGCCCGACACTCGGTGTCGTCCGCGGCGGGGTAGGAGGCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RSHPPSPRVASNGTR*PDTRCRPRRGRRRR Trigger: ACGGCGCCTCCTACCCCGCCGCGGACGACACCGAGTGTCGGGGCAACGGGTTCCGTTCGAAGCCACCCGGGGCGACGGAGGATGGGACCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | GCCGCCGCCGCCGTACTTGCCGGTCCCATCCTCCGTCGCCCCGGGTaGCTTCGAACGGAACCCGTTGCCCCGACACTCGGTGTCGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAVLAGPILRRPG*LRTEPVAPTLGVVR Trigger: GCGGACGACACCGAGTGTCGGGGCAACGGGTTCCGTTCGAAGCCACCCGGGGCGACGGAGGATGGGACCGGCAAGTACGGCGGCGGCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | AAGCGTACTTGCGGTAGCGGGCTTCCGCGCCCTCGTCCACCGCCTTaGGCTTCAGCGACACGCCCTCGGCGGCCGCGGGGAAGCCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRTCGSGLPRPRPPP*ASATRPRRPRGSRR Trigger: CCTACGGCTTCCCCGCGGCCGCCGAGGGCGTGTCGCTGAAGCGCAAGGCGGTGGACGAGGGCGCGGAAGCCCGCTACCGCAAGTACGCTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | CCGCCACATCCGCCCACTGCACTGGGGGCCCGCAGTCTACCATCTTaGTGCTCACCAGCTCCAGCGCCCCCGGGTCCACGCCCTTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPHPPTALGARSLPS*CSPAPAPPGPRPWR Trigger: CCGCCAAGGGCGTGGACCCGGGGGCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | GGCCGCCTTGAGCGCGCCCTGGCCCGCCACATCCGCCCACTGCACTaGGGGCCCGCAGTCTACCATCTTGCTGCTCACCAGCTCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLERALARHIRPLH*GPAVYHLAAHQLQR Trigger: GCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | AGCCCGCCGCGTACTCAGTGGCCGCCGACGGTCCCCCGCACGCGTTaGCCGTGTACAGCGGCTCAGTCAGGTTGCCAGCTACTACCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPRTQWPPTVPRTR*PCTAAQSGCQLLPG Trigger: CCCCGGTAGTAGCTGGCAACCTGACTGAGCCGCTGTACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACGCGGCGGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | CCACATCCGCCCACTGCACTGGGGGCCCGCAGTCTACCATCTTGCTaGTCACCAGCTCCAGCGCCCCCGGGTCCACGCCCTTGGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHPPTALGARSLPSC*SPAPAPPGPRPWRA Trigger: AGCCCGCCAAGGGCGTGGACCCGGGGGCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | AAGGGCCAAAGCAGCTCCTCCTCTAGGGCCGCCTTGAGCGCGCCCTaGCCCGCCACATCCGCCCACTGCACTGGGGGCCCGCAGTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: KGQSSSSSRAALSAP*PATSAHCTGGPQST Trigger: GGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGAGGAGCTGCTTTGGCCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS GCA 90 bp | TCTAGGGCCGCCTTGAGCGCGCCCTGGCCCGCCACATCCGCCCACTaGACTGGGGGCCCGCAGTCTACCATCTTGCTGCTCACCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAALSAPWPATSAH*TGGPQSTILLLTSS Trigger: GGAGCTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 90 bp | GCGCTTGAGGAGGTTGGAGGCTGTGAGGGCGGAAATGTCGTCGTGTaGCCAAGCGTAGTGGCAGCGCTGGCGACCCCCTGGAGGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ALEEVGGCEGGNVVV*PSVVAALATPWRQL Trigger: GAGTTGCCTCCAGGGGGTCGCCAGCGCTGCCACTACGCTTGGGCACACGACGACATTTCCGCCCTCACAGCCTCCAACCTCCTCAAGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | AATGTCGTCGTGTGCCCAAGCGTAGTGGCAGCGCTGGCGACCCCCTaGAGGCAACTCCAACTTGTGAGCCGGCGACGGAGTGGTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NVVVCPSVVAALATP*RQLQLVSRRRSGGG Trigger: TCCTCCACCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGCTGCCACTACGCTTGGGCACACGACGACATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCGGCTCCGGGTCCCCTTaGGCACCGTTGAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSGSGSP*APLRKA Trigger: CGCCTTCCTCAACGGTGCCAAAGGGGACCCGGAGCC...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CAA 90 bp | CCAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTGGCTCCGGGTCCCCTTaGGCACCGTTGAGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTHVGYGQSAERRWRTSRGSGSP*APLRKA Trigger: CGCCTTCCTCAACGGTGCCAAAGGGGACCCGGAGCC...ACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | CAACTCATGTCGGGTATGGCCAGTCTGCCGAGCGGAGATGGCGAACTTCCCGTCTCCCCTTTGGCACCGTaGAGGAAGGCGGCGTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: QLMSGMASLPSGDGELPVSPLAP*RKAASP Trigger: CGGTGACGCCGCCTTCCTCAACGGTGCCAAAGGGGA...GACGGGAAGTTCGCCATCTCCGCTCGGCAGACTGGCCATACCCGACATGAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCCTCATTAGCCCCAAATCTCTCTGGTCTGGGAGAATCTGCTCCCCAGGGTCCTCTAGGGCCGCCTaGAGCGCGCCCTGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLISPKSLWSGRICSPGSSRAA*SAPWPA Trigger: GGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGA...CCCTGGGGAGCAGATTCTCCCAGACCAGAGAGATTTGGGGCTAATGAGGAAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGGCCCGAGAGCCCACCTaGGCTAGAGCAGCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VAGRESRSSLGPGANSCRAREPT*ARAAST Trigger: TGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGC...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCAACGAGTCCAGCTCCTaGGAGGGAGCCCGAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSNESSS*EGAREP Trigger: GGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTT...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAGCCCAGCAAAGGAAGTGTGGGGACCCCAGCGGTGGGTCCATGTACTCCACCCGCTCCGGGAACTaGTCAAAGGGCTCGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERAQQRKCGDPSGGSMYSTRSGN*SKGSSC Trigger: GCAGCTCGAGCCCTTTGACAAGTTCCCGGAGCGGGT...GGAGTACATGGACCCACCGCTGGGGTCCCCACACTTCCTTTGCTGGGCTCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCGGGGAGAGAGAGCAGGAGTTCCTTAGGCCCTGGTGCCAACTCATGTCGGACCCGCTCCGGGAACTaGTCAAAGGGCTCGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VAGRESRSSLGPGANSCRTRSGN*SKGSSC Trigger: GCAGCTCGAGCCCTTTGACAAGTTCCCGGAGCGGGT...CCGACATGAGTTGGCACCAGGGCCTAAGGAACTCCTGCTCTCTCTCCCCGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 90 bp | CAACTAACGAGTCCAGCTCCTTGGAGGGAGCCCGAGAGCCCACCTTaGCTAGAGCAGCCTCCACATCTTTGTAGGAGAGGGGCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLTSPAPWREPESPP*LEQPPHLCRRGASA Trigger: TGCAGAGGCCCCTCTCCTACAAAGATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTTAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGCCCTCGTCCACCGCCTaGCGCTTCAGCGACACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVFLCKASKPGTERAQQRPSSTA*RFSDTP Trigger: GGGCGTGTCGCTGAAGCGCAAGGCGGTGGACGAGGG...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGAAGTTCCTCTAGGGCCGCCTaGAGCGCGCCCTGGCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSCAKLPNREQKEPSKGSSSRAA*SAPWPA Trigger: GGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGA...ACTTCCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 90 bp | CGGAGCCATACATTTTGTCCCACTCAACTAACGAGTCCAGCTCCTTaGAGGGAGCCCGAGAGCCCACCTTGGCTAGAGCAGCCTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RSHTFCPTQLTSPAP*REPESPPWLEQPPH Trigger: ATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTTAGTTGAGTGGGACAAAATGTATGGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS-3UTR CAA 90 bp | GCTGTCTTCTTGTGCAAAGCTTCCAAACCGGGAACAGAAAGAGCCCAGCAAAGGGCCCGAGAGCCCACCTaGGCTAGAGCAGCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AVFLCKASKPGTERAQQRAREPT*ARAAST Trigger: TGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGC...CCTTTGCTGGGCTCTTTCTGTTCCCGGTTTGGAAGCTTTGCACAAGAAGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAACAATGAGAGAGGGAGGGTTAAAGCACAGGGTCCAGGAGACAGAGACAAACGAGTCCAGCTCCTaGGAGGGAGCCCGAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRTMREGGLKHRVQETETNESSS*EGAREP Trigger: GGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTT...TGTCTCTGTCTCCTGGACCCTGTGCTTTAACCCTCCCTCTCTCATTGTTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAGAGCAGCCAAACTCTAACATTCTTTCTGAGGTCAGTTTCTTCCTGAGTTCCCCTTTGGCACCGTaGAGGAAGGCGGCGTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: TGEQPNSNILSEVSFFLSSPLAP*RKAASP Trigger: CGGTGACGCCGCCTTCCTCAACGGTGCCAAAGGGGA...ACTCAGGAAGAAACTGACCTCAGAAAGAATGTTAGAGTTTGGCTGCTCTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CAA 90 bp | CTGCAGCAGCGCGGGCGGGGGCGGCGGGGCGAGCGCGGCGCTCGTTaGCGCGCAGTAGCCGGACGCCAGGTACCCGCCTCCGTAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQQRGRGRRGERGAR*RAVAGRQVPASVAR Trigger: GCGGGCTACGGAGGCGGGTACCTGGCGTCCGGCTACTGCGCGCAAACGAGCGCCGCGCTCGCCCCGCCGCCCCCGCCCGCGCTGCTGCAG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS GCA 72 bp | TGCGGTAGCGGGCTTCCGCGCCCTCGTCCACCGCCTTaGGCTTCAGCGACACGCCCTCGGCGGCCGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGSGLPRPRPPP*ASATRPRRPRG Trigger: TCCCCGCGGCCGCCGAGGGCGTGTCGCTGAAGCGCAAGGCGGTGGACGAGGGCGCGGAAGCCCGCTACCGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS TCA 72 bp | GCCCGGGCCAGGGCTCCGGGTCCCCTTTGGCACCGTTaGGGAAGGCGGCGTCACCGTAGCTGCCCAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARARAPGPLWHR*GRRRHRSCPGP Trigger: CGGGCCTGGGCAGCTACGGTGACGCCGCCTTCCTCAACGGTGCCAAAGGGGACCCGGAGCCCTGGCCCGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS TCA 72 bp | CGAGCTGCGGCGCGTAGGCGGGGGAGCCCAGGACCTTaGGAGGGCCGCCGCCGCCGTACTTGCCGGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RAAARRRGSPGP*EGRRRRTCRSH Trigger: ATGGGACCGGCAAGTACGGCGGCGGCGGCCCTCTCAAGGTCCTGGGCTCCCCCGCCTACGCGCCGCAGCTCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 72 bp | CGGCCGCGGGGGCCTTGGCCGGCTCGTAAGCGTACTTaGGGTAGCGGGCTTCCGCGCCCTCGTCCACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPRGPWPARKRT*GSGLPRPRPPP Trigger: AGGCGGTGGACGAGGGCGCGGAAGCCCGCTACCGCAAGTACGCTTACGAGCCGGCCAAGGCCCCCGCGGCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | CCAGGTACCCGCCTCCGTAGCCCGCCGCGTACTCAGTaGCCGCCGACGGTCCCCCGCACGCGTTGCCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGTRLRSPPRTQ*PPTVPRTRCPC Trigger: ACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACGCGGCGGGCTACGGAGGCGGGTACCTGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | AGCAGCTCCTCCTCTAGGGCCGCCTTGAGCGCGCCCTaGCCCGCCACATCCGCCCACTGCACTGGGGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSRAALSAP*PATSAHCTGGP Trigger: CGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGAGGAGCTGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 72 bp | CTCCGCGCAGGCGCAGCAGCGTGGCACCTAGTCGGGTaGCGAGGCAGCGCCCCAGCAGCGCCTTACCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGAAAWHLVG*RGSAPAAPYRS Trigger: GCTGCGGTAAGGCGCTGCTGGGGCGCTGCCTCGCCACCCGACTAGGTGCCACGCTGCTGCGCCTGCGCGGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS GCA 72 bp | CCTCCGTCGCCCCGGGTGGCTTCGAACGGAACCCGTTaGCCCGACACTCGGTGTCGTCCGCGGCGGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPSPRVASNGTR*PDTRCRPRRGR Trigger: CCTACCCCGCCGCGGACGACACCGAGTGTCGGGGCAACGGGTTCCGTTCGAAGCCACCCGGGGCGACGGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | TTGGCGGGCTCCCCCGACGGCTCCGCGAAGCCTCCGTaGGCGGCCGGGACCCGCTCCGGGAACTTGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LAGSPDGSAKPP*AAGTRSGNLSK Trigger: CTTTGACAAGTTCCCGGAGCGGGTCCCGGCCGCCCACGGAGGCTTCGCGGAGCCGTCGGGGGAGCCCGCCAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CAA 72 bp | GAGCCCAGGACCTTGAGAGGGCCGCCGCCGCCGTACTaGCCGGTCCCATCCTCCGTCGCCCCGGGTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EPRTLRGPPPPY*PVPSSVAPGGF Trigger: GAAGCCACCCGGGGCGACGGAGGATGGGACCGGCAAGTACGGCGGCGGCGGCCCTCTCAAGGTCCTGGGCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CAA 90 bp | GGCGGCCTCAGCAAGGGCCAAAGCAGCTCCTCCTCTAGGGCCGCCTaGAGCGCGCCCTGGCCCGCCACATCCGCCCACTGCACTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGLSKGQSSSSSRAA*SAPWPATSAHCTGG Trigger: GCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGAGGAGCTGCTTTGGCCCTTGCTGAGGCCGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 72 bp | CCGCCCACTGCACTGGGGGCCCGCAGTCTACCATCTTaGTGCTCACCAGCTCCAGCGCCCCCGGGTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: PPTALGARSLPS*CSPAPAPPGPR Trigger: GCGTGGACCCGGGGGCGCTGGAGCTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS TCA 72 bp | GCAAGGGCCAAAGCAGCTCCTCCTCTAGGGCCGCCTTaGGCGCGCCCTGGCCCGCCACATCCGCCCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARAKAAPPLGPP*ARPGPPHPPTA Trigger: TGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGAGGAGCTGCTTTGGCCCTTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 72 bp | GCCTTGAGCGCGCCCTGGCCCGCCACATCCGCCCACTaGACTGGGGGCCCGCAGTCTACCATCTTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALSAPWPATSAH*TGGPQSTILLL Trigger: GAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 72 bp | GAGCGCGCCCTGGCCCGCCACATCCGCCCACTGCACTaGGGGCCCGCAGTCTACCATCTTGCTGCTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERALARHIRPLH*GPAVYHLAAHQ Trigger: CTGGTGAGCAGCAAGATGGTAGACTGCGGGCCCCCAGTGCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CAA 72 bp | AGCAAGGGCCAAAGCAGCTCCTCCTCTAGGGCCGCCTaGAGCGCGCCCTGGCCCGCCACATCCGCCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SKGQSSSSSRAA*SAPWPATSAHC Trigger: GCAGTGGGCGGATGTGGCGGGCCAGGGCGCGCTCAAGGCGGCCCTAGAGGAGGAGCTGCTTTGGCCCTTGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CCA 72 bp | GCCGTACTTGCCGGTCCCATCCTCCGTCGCCCCGGGTaGCTTCGAACGGAACCCGTTGCCCCGACACTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVLAGPILRRPG*LRTEPVAPTLG Trigger: ACCGAGTGTCGGGGCAACGGGTTCCGTTCGAAGCCACCCGGGGCGACGGAGGATGGGACCGGCAAGTACGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS CAA 72 bp | GCGTACTCAGTGGCCGCCGACGGTCCCCCGCACGCGTaGCCCGTGTACAGCGGCTCAGTCAGGTTGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AYSVAADGPPHA*PVYSGSVRLPA Trigger: AGCTGGCAACCTGACTGAGCCGCTGTACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS TCA 72 bp | CAGCGCTGGCGACCCCCTGGAGGCAACTCCAACTTGTaGGCCGGCGACGGAGTGGTGGAGGAGACGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRWRPPGGNSNL*AGDGVVEETSR Trigger: CCTGGACGTCTCCTCCACCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 72 bp | CGTACTCAGTGGCCGCCGACGGTCCCCCGCACGCGTTaGCCGTGTACAGCGGCTCAGTCAGGTTGCCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RTQWPPTVPRTR*PCTAAQSGCQL Trigger: TAGCTGGCAACCTGACTGAGCCGCTGTACACGGGCAACGCGTGCGGGGGACCGTCGGCGGCCACTGAGTACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
||
| CDS GCA 72 bp | GAGGTTGGAGGCTGTGAGGGCGGAAATGTCGTCGTGTaGCCAAGCGTAGTGGCAGCGCTGGCGACCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EVGGCEGGNVVV*PSVVAALATPW Trigger: CCAGGGGGTCGCCAGCGCTGCCACTACGCTTGGGCACACGACGACATTTCCGCCCTCACAGCCTCCAACCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | GTGTGCCCAAGCGTAGTGGCAGCGCTGGCGACCCCCTaGAGGCAACTCCAACTTGTGAGCCGGCGACGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VCPSVVAALATP*RQLQLVSRRRS Trigger: ACTCCGTCGCCGGCTCACAAGTTGGAGTTGCCTCCAGGGGGTCGCCAGCGCTGCCACTACGCTTGGGCACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS GCA 72 bp | CATCTTTGTAGGAGAGGGGCCTCTGCAGTCCAGAGATaGCCGCCTCGGCCGCTGCCTGCTGGCACAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLCRRGASAVQR*PPRPLPAGTTA Trigger: GGCAGTTGTGCCAGCAGGCAGCGGCCGAGGCGGGCATCTCTGGACTGCAGAGGCCCCTCTCCTACAAAGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | CTGGAGGCAACTCCAACTTGTGAGCCGGCGACGGAGTaGTGGAGGAGACGTCCAGGTGCTGCTCTGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: LEATPTCEPATE*WRRRPGAALAT Trigger: AGTGGCCAGAGCAGCACCTGGACGTCTCCTCCACCACTCCGTCGCCGGCTCACAAGTTGGAGTTGCCTCCAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | AGTCCAGCTCCTTGGAGGGAGCCCGAGAGCCCACCTTaGCTAGAGCAGCCTCCACATCTTTGTAGGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPAPWREPESPP*LEQPPHLCRRG Trigger: CCCTCTCCTACAAAGATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CAA 90 bp | CCGGAGCCATACATTTTGTCCCACTCAACTAACGAGTCCAGCTCCTaGGAGGGAGCCCGAGAGCCCACCTTGGCTAGAGCAGCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: PEPYILSHSTNESSS*EGAREPTLARAAST Trigger: TGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTTAGTTGAGTGGGACAAAATGTATGGCTCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CCA 72 bp | ACATTTTGTCCCACTCAACTAACGAGTCCAGCTCCTTaGAGGGAGCCCGAGAGCCCACCTTGGCTAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TFCPTQLTSPAP*REPESPPWLEQ Trigger: CTGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTTAGTTGAGTGGGACAAAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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| CDS CAA 72 bp | TACATTTTGTCCCACTCAACTAACGAGTCCAGCTCCTaGGAGGGAGCCCGAGAGCCCACCTTGGCTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: YILSHSTNESSS*EGAREPTLARA Trigger: TGCTCTAGCCAAGGTGGGCTCTCGGGCTCCCTCCAAGGAGCTGGACTCGTTAGTTGAGTGGGACAAAATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178140.2 ENSMUST00000213610.2 |
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