Pregenerated sensors for FIGLA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030001

Ensembl transcript IDs: ENSMUST00000032070.4

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCGCTCCAACACCAGATGCAGGTCATCCGTGGTGGAGTAGCCGCCTaGGGGCAGGCGCTTGAGCCTACAGATGGCGGCGAGCCGGGGCAG	+
Preference number: 5 (lower is better) Translates to: ALQHQMQVIRGGVAA*GQALEPTDGGEPGQ Trigger: CTGCCCCGGCTCGCCGCCATCTGTAGGCTCAAGCGCCTGCCCTCAGGCGGCTACTCCACCACGGATGACCTGCATCTGGTGTTGGAGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS TCA 90 bp	GTAGGTTGGGTAGCATTTCCCAAGAGCTCTCTAGTCGAGGACACATaGGGGTCAGAGGGTCTGCCACTGTGGGTCTGCTCCTCAGGGCTT	+
Preference number: 5 (lower is better) Translates to: VGWVAFPKSSLVEDT*GSEGLPLWVCSSGL Trigger: AAGCCCTGAGGAGCAGACCCACAGTGGCAGACCCTCTGACCCTCATGTGTCCTCGACTAGAGAGCTCTTGGGAAATGCTACCCAACCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS CCA 90 bp	GTAACTCCTAGTCTCAGGTACTGTGCTCTGATGGTAGCTGTACAATaGCTCACTATGGCCAGCATACGCCCAAGGCCCCTCCTCTTCTTT	+
Preference number: 5 (lower is better) Translates to: VTPSLRYCALMVAVQ*LTMASIRPRPLLFF Trigger: AAAGAAGAGGAGGGGCCTTGGGCGTATGCTGGCCATAGTGAGCCATTGTACAGCTACCATCAGAGCACAGTACCTGAGACTAGGAGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS GCA 72 bp	TTATCCGTTCACGCTCTTTGGCGTTGGCCACACGCCTaGGCTCCAACACCAGATGCAGGTCATCCGTGGTGG	+
Preference number: 6 (lower is better) Translates to: LSVHALWRWPHA*APTPDAGHPWW Trigger: CCACCACGGATGACCTGCATCTGGTGTTGGAGCGCAGGCGTGTGGCCAACGCCAAAGAGCGTGAACGGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS TCA 72 bp	GTAGCATTTCCCAAGAGCTCTCTAGTCGAGGACACATaGGGGTCAGAGGGTCTGCCACTGTGGGTCTGCTCC	+
Preference number: 6 (lower is better) Translates to: VAFPKSSLVEDT*GSEGLPLWVCS Trigger: GGAGCAGACCCACAGTGGCAGACCCTCTGACCCTCATGTGTCCTCGACTAGAGAGCTCTTGGGAAATGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS CCA 72 bp	AGTCTCAGGTACTGTGCTCTGATGGTAGCTGTACAATaGCTCACTATGGCCAGCATACGCCCAAGGCCCCTC	+
Preference number: 6 (lower is better) Translates to: SLRYCALMVAVQ*LTMASIRPRPL Trigger: GAGGGGCCTTGGGCGTATGCTGGCCATAGTGAGCCATTGTACAGCTACCATCAGAGCACAGTACCTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032070.4
CDS TCA 72 bp	GCCACTGTGGGTCTGCTCCTCAGGGCTTTGTTTCTCTaGGACCTTCGCTTCTTCCAGAACACAGCCGAGTAT	+
Preference number: 6 (lower is better) Translates to: ATVGLLLRALFL*DLRFFQNTAEY Trigger: ATACTCGGCTGTGTTCTGGAAGAAGCGAAGGTCTCAGAGAAACAAAGCCCTGAGGAGCAGACCCACAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032070.4

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