Pregenerated sensors for FIG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038417Ensembl transcript IDs: ENSMUST00000043814.5
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACAACACTGGATCCTTTACCAATGAGCTaGATCTCAGGATCTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TGTYLSIGAYKIWKTTLDPLPMS*ISGSGA Trigger: TGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGG...ATCCAGTGTTGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGCATTTCTTTATTACCTGCAATTAGTCATTTGCATGGTACAAAGAGGTAATCACCGAAGGCTGTaGTACAGGTGCTGGGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: EAAFLYYLQLVICMVQRGNHRRL*YRCWGV Trigger: GACTCCCCAGCACCTGTATCACAGCCTTCGGTGATT...ACCTCTTTGTACCATGCAAATGACTAATTGCAGGTAATAAAGAAATGCTGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGCATTTCTTTATTACCTGCAATTAGTCATTTGCATGGTACAAAGAGGTGGAGTCCTTTACCAATaGGCTGCATCTCAGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: EAAFLYYLQLVICMVQRGGVLYQ*AASQDL Trigger: CAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCC...ACCTCTTTGTACCATGCAAATGACTAATTGCAGGTAATAAAGAAATGCTGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| 3UTR CCA 72 bp | GGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTaGGGCACGCCTTCTCACAGAGGACACTGTCCTCGA | + |
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Preference number: 3 (lower is better) Translates to: GESFTNELHLRI*GTPSHRGHCPR Trigger: TCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| 3UTR GCA 72 bp | GAGGCAGCATTTCTTTATTACCTGCAATTAGTCATTTaGATGGTACAAAGAGGTGAAAAGTTTCAGATACAT | + |
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Preference number: 3 (lower is better) Translates to: EAAFLYYLQLVI*MVQRGEKFQIH Trigger: ATGTATCTGAAACTTTTCACCTCTTTGTACCATGCAAATGACTAATTGCAGGTAATAAAGAAATGCTGCCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGGGTGGCGGGGCGCTaGCTGCCGTCTTCCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ELHLRIWGTPSHRGHCPRGVAGR*LPSSAA Trigger: TGCAGCGGAAGACGGCAGCCAGCGCCCCGCCACCCC...TCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | CTGGAATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGGCGGGGCGCTGGCTaGCGTCTTCCGCTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LESPKAVIQVLGSPLPMSWRGAG*RLPLQD Trigger: GTCCTGCAGCGGAAGACGGCAGCCAGCGCCCCGCCA...GCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGATTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | GAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGACATCTTCCCGGTCGGTaGCAGAGTCATCCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ELHLRIWGTPSHRGHCPRHLPGR*QSHPQS Trigger: GCTCTGAGGATGACTCTGGCACCGACCGGGAAGATG...TCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | CAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGCACGCGGAGTGATCCTCCTCTaGCAGGCTACTGGAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: QVLGSPLPMSCISGSGARGVILL*QATGET Trigger: AGTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCC...GCGTGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | GAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGATTGCCCACCATGAACTaGGCAGTGTTGGTGCGATCC | + |
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Preference number: 4 (lower is better) Translates to: ELHLRIWGTPSHRGHCPRLPTMN*AVLVRS Trigger: GGATCGCACCAACACTGCGCAGTTCATGGTGGGCAA...TCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | ATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGCCGTCCTGGCCGTAAAATGCTaGAGTAAGAATCAGGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: ISGSGARLLTEDTVLEAVLAVKC*SKNQGG Trigger: ACCGCCCTGATTCTTACTGCAGCATTTTACGGCCAG...GACGGCCTCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | CCAATGAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCAGTTGGTTCGAAGGATaGCAGTCTGGAGCCGACCAG | + |
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Preference number: 4 (lower is better) Translates to: PMSCISGSGARLLTEDTVSWFEG*QSGADQ Trigger: CTGGTCGGCTCCAGACTGGCATCCTTCGAACCAACT...GACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | CTGGAATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCGGGAGTTCCCAGAGATaGGGTTTCCCTTCTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LESPKAVIQVLGSPLPMSGSSQR*GFPSVG Trigger: CCCCACAGAAGGGAAACCTCATCTCTGGGAACTCCC...GCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGATTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTCATCCTCAGAGCTGCTaGACACAGCCTCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: AVIQVLGSPLPMSCISGSHPQSC*TQPPRS Trigger: CGAGCGAGGAGGCTGTGTCCAGCAGCTCTGAGGATG...AGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | ATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGCCGTCAGCCTTCTAAGAACCTaGCAAAACCTACGACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ISGSGARLLTEDTVLEAVSLLRT*QNLRLQ Trigger: TTGGAGTCGTAGGTTTTGTCAGGTTCTTAGAAGGCT...GACGGCCTCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | ATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATGGGACAGAGTCTGCATaGTGTCCTTGGAGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ITEGCDTGAGESFTNELHGTESA*CPWSAG Trigger: CCCAGCACTCCAAGGACATCATGCAGACTCTGTCCC...ATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | CCAATGAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCGGAGGTAAAAGTCTGTaGGGAGTTCCCAGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: PMSCISGSGARLLTEDTVGGKSL*GVPRDE Trigger: CTCATCTCTGGGAACTCCCCACAGACTTTTACCTCC...GACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTCATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | CAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGCACGCTTTCGGCATCATAGTTaGGATGTCTTGGGACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLGSPLPMSCISGSGARFRHHS*DVLGPE Trigger: TTCTGGTCCCAAGACATCTCAACTATGATGCCGAAA...GCGTGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | CCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAACTGCGCAGTGTTGGTaGGATCCAAACAGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: PKAVIQVLGSPLPMSCISTAQCW*DPNSPH Trigger: GTGTGGACTGTTTGGATCGCACCAACACTGCGCAGT...TGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGCCGTCATAGTTGAGATGTCTTaGGACCAGAATAAGGGAACG | + |
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Preference number: 4 (lower is better) Translates to: ISGSGARLLTEDTVLEAVIVEMS*DQNKGT Trigger: CGTTCCCTTATTCTGGTCCCAAGACATCTCAACTAT...GACGGCCTCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | CCAATGAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCAACAGTCCACACAGTTaGTTCGAAGGATGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PMSCISGSGARLLTEDTVNSPHS*FEGCQS Trigger: AGACTGGCATCCTTCGAACCAACTGTGTGGACTGTT...GACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTCATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGGCTGCATGATACCTTaGCTAGCTTGGATATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VIQVLGSPLPMSCISGSGGCMIP*LAWIWA Trigger: GGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCC...CCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | GTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGGCTACTGGAGAGACTaGCTCCATACACTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VIQVLGSPLPMSCISGSGGYWRD*LHTLPS Trigger: TGAAGGAAGTGTATGGAGTCAGTCTCTCCAGTAGCC...CCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | ACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCTCTTTGCCAAGGGGCTaGATGATACCTTGGCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TEGCDTGAGESFTNELHLSLPRG*MIPWLA Trigger: AGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGA...GAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGATGTCCTTGGAGTGCTaGGTCCACGGTGCTATCTTT | + |
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Preference number: 4 (lower is better) Translates to: VIQVLGSPLPMSCISGSGMSLEC*VHGAIF Trigger: AAAGATAGCACCGTGGACCCAGCACTCCAAGGACAT...CCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | ACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCATGACCTCCAATGTCTaGCATCTTCCTCCGCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: TEGCDTGAGESFTNELHLMTSNV*HLPPLS Trigger: ACTAAGCGGAGGAAGATGGCAGACATTGGAGGTCAT...GAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | CCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGAGGTTTCCCTTCTGTaGGGTGGAAAACACCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PKAVIQVLGSPLPMSCISEVSLL*GGKHPK Trigger: TTTTGGGTGTTTTCCACCCCACAGAAGGGAAACCTC...TGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATACTTCCTTCATGGGCTaGACCACATTCTCAGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: ITEGCDTGAGESFTNELHTSFMG*TTFSVA Trigger: AGCGACTGAGAATGTGGTCCAGCCCATGAAGGAAGT...ATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCATACCTTGGCTAGCTTaGATATGGGCCTGGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: TEGCDTGAGESFTNELHLIPWLA*IWAWKI Trigger: GATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTAT...GAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | GCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTCATCTGGCCGTAAAATaGTGCAGTAAGAATCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AVIQVLGSPLPMSCISGSHLAVK*CSKNQG Trigger: GCCCTGATTCTTACTGCAGCATTTTACGGCCAGATG...AGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | TGTGCACACACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACAAGGGGATGTAGACAATaGTGTGCTCCGGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CAHTGTYLSIGAYKIWKTRGCRQ*CAPVAG Trigger: TCCTGCCACCGGAGCACACCATTGTCTACATCCCCT...TGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGTGTGTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCATACACTTCCTTCATaGGCTGGACCACATTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ITEGCDTGAGESFTNELHHTLPS*AGPHSQ Trigger: CTGAGAATGTGGTCCAGCCCATGAAGGAAGTGTATG...ATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCGCTTGGATATGGGCCTaGAAGATCTCTGTAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: TEGCDTGAGESFTNELHLAWIWA*KISVDF Trigger: AAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGC...GAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | GTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGTACTTCGTTTCTGCATaGTTGCTCCCAACTAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VIQVLGSPLPMSCISGSGYFVSA*LLPTRK Trigger: CTTTCTAGTTGGGAGCAATCATGCAGAAACGAAGTA...CCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTACAAAATCTGGAAGACAACACTGGATTCCTGGTAGCTGGAATCACCGAGCCGATCGAGAACGTTaGACAGCTTACTCTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPTKSGRQHWIPGSWNHRADRER*TAYSWC Trigger: ACACCAAGAGTAAGCTGTGCAACGTTCTCGATCGGC...TCGGTGATTCCAGCTACCAGGAATCCAGTGTTGTCTTCCAGATTTTGTAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | CTGGAATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTTTTCGCACGGTAAATaGACTTGGATCAATGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LESPKAVIQVLGSPLPMSFSHGK*TWINAN Trigger: GTTGGCATTGATCCAAGTCCATTTACCGTGCGAAAA...GCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGATTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GTAGCTGGAATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATCAAACCTGGCATAAATaGAGTGATCCTCCTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: VAGITEGCDTGAGESFTNQTWHK*SDPPLT Trigger: TGTCAGAGGAGGATCACTCCATTTATGCCAGGTTTG...ATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGATTCCAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | TGTGCACACACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACACCAGTGGGAATCACATaGCCTCCTAGTTCATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CAHTGTYLSIGAYKIWKTPVGIT*PPSSFH Trigger: GTGGAATGAACTAGGAGGTCATGTGATTCCCACTGG...TGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGTGTGTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | ACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCTCGTTTCTGCATGATTaGTCCCAACTAGAAAGTATC | + |
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Preference number: 4 (lower is better) Translates to: TEGCDTGAGESFTNELHLSFLHD*SQLESI Trigger: GATACTTTCTAGTTGGGAGCAATCATGCAGAAACGA...GAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR GCA 90 bp | TGTGCACACACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACAGGTCTCCACCTCATTTaGAACGTCACCCTCACAGTT | + |
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Preference number: 4 (lower is better) Translates to: CAHTGTYLSIGAYKIWKTGLHLI*NVTLTV Trigger: AACTGTGAGGGTGACGTTGCAAATGAGGTGGAGACC...TGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGTGTGTGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTACAAAATCTGGAAGACAACACTGGATTCCTGGTAGCTGGAATCACCGACATAGATCAAAAGCTTaGACTGCCCGCAGAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: VPTKSGRQHWIPGSWNHRHRSKA*TARRTH Trigger: ATGGGTTCTGCGGGCAGTCCAAGCTTTTGATCTATG...TCGGTGATTCCAGCTACCAGGAATCCAGTGTTGTCTTCCAGATTTTGTAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | CCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCACTTTCTGTCTACTCTTaGAGGCTGAACTTCATAAAT | + |
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Preference number: 4 (lower is better) Translates to: PKAVIQVLGSPLPMSCISLSVYS*RLNFIN Trigger: ATTTATGAAGTTCAGCCTCCAAGAGTAGACAGAAAG...TGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | GAGGCAGCATTTCTTTATTACCTGCAATTAGTCATTTGCATGGTACAAAGAGGTTACAGCACCAGCTTCTaGACCGAGCTGATGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: EAAFLYYLQLVICMVQRGYSTSF*TELMMG Trigger: CCCCATCATCAGCTCGGTCCAGAAGCTGGTGCTGTA...ACCTCTTTGTACCATGCAAATGACTAATTGCAGGTAATAAAGAAATGCTGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | TGTGCACACACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACACACCCAAAAACAGGTTaGTGGAATCTTGTCTATCAG | + |
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Preference number: 4 (lower is better) Translates to: CAHTGTYLSIGAYKIWKTHPKTG*WNLVYQ Trigger: CTGATAGACAAGATTCCATCAACCTGTTTTTGGGTG...TGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGTGTGTGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | ACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACAACACTGGATACCTACTGGATCTCCTaGCTATTAGGGTCACATACA | + |
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Preference number: 4 (lower is better) Translates to: TGTYLSIGAYKIWKTTLDTYWIS*LLGSHT Trigger: TGTATGTGACCCTAATAGCCAGGAGATCCAGTAGGT...ATCCAGTGTTGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR TCA 90 bp | TTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCAAGCATCTGGTCAAAGTaGAGAGCAGCCACGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIIFTVCVHTCVCMHSCASIWSK*RAATCA Trigger: TGCACACGTGGCTGCTCTTCACTTTGACCAGATGCT...TGCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CCA 90 bp | TTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCATGGCTAGCTTGGATATaGGCCTGGAAGATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFTVCVHTCVCMHSCAWLAWI*AWKISV Trigger: TACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCA...TGCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR TCA 90 bp | TTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCACATAAAATCACGTGCTaGACTTGTCATGGCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIIFTVCVHTCVCMHSCAHKITC*TCHGQA Trigger: TGCTTGGCCATGACAAGTTCAGCACGTGATTTTATG...TGCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTCGCAGAACCCATGAATaGTATACAATAGCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFIIFTVCVHTCVCMHSCRRTHE*YTIASH Trigger: GTGACTGGCTATTGTATATCATTCATGGGTTCTGCG...ACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CCA 90 bp | ACTTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTTCTCCTGGCACGCCTTaGATGTTTCTGACTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TFIIFTVCVHTCVCMHSCSPGTP*MFLTLT Trigger: TGTTAAAGTCAGAAACATCCAAGGCGTGCCAGGAGA...ACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGCATTTCTTTATTACCTGCAATTAGTCATTTGCATGGTACAAAGAGGTTTTTCCAGTTTCATCTaGTTTTCGCACGGTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAFLYYLQLVICMVQRGFSSFI*FSHGKW Trigger: CCATTTACCGTGCGAAAACCAGATGAAACTGGAAAA...ACCTCTTTGTACCATGCAAATGACTAATTGCAGGTAATAAAGAAATGCTGCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR GCA 90 bp | ACTTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTAGAAGAGTAACTGCCTaGGGTAAAAGACATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFIIFTVCVHTCVCMHSCRRVTA*GKRHHR Trigger: TCTGTGATGTCTTTTACCGCAGGCAGTTACTCTTCT...ACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CCA 90 bp | TTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCCACGGTAAATGGACTTaGATCAATGCCAACAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FYYFYCVCAYMCVYALLCHGKWT*INANSF Trigger: AAAACTGTTGGCATTGATCCAAGTCCATTTACCGTG...GCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR TCA 90 bp | ACTTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTCGGAAGAACTCATTGTaGATATCAATCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFIIFTVCVHTCVCMHSCRKNSL*ISISSS Trigger: GGAAGAAGAGATTGATATTCACAATGAGTTCTTCCG...ACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR GCA 90 bp | TTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCATTCAATCTTATAAATTaGATGACCTCCAATGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIFTVCVHTCVCMHSCAFNLIN*MTSNVC Trigger: GCAGACATTGGAGGTCATGCAATTTATAAGATTGAA...TGCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | TGGAGCCTTCATCTTCCCGGTCGGTGCCAGAGTCATCCTCAGAGCTaGTGGACACAGCCTCCTCGCTCGGGGGTGGCGGGGCGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLHLPGRCQSHPQS*WTQPPRSGVAGRWL Trigger: CAGCCAGCGCCCCGCCACCCCCGAGCGAGGAGGCTGTGTCCAGCAGCTCTGAGGATGACTCTGGCACCGACCGGGAAGATGAAGGCTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | GTACTTGGCCATGTCCCAGGGGATGTAGACAATGGTGTGCTCCGGTaGCAGGAACTGGTTCAGGTAAGTGACCGCAGCCACCAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGHVPGDVDNGVLR*QELVQVSDRSHQLF Trigger: GAAGAGCTGGTGGCTGCGGTCACTTACCTGAACCAGTTCCTGCCACCGGAGCACACCATTGTCTACATCCCCTGGGACATGGCCAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | CAGTCGCTTTGGCACTGTCTCCCGTGTCAGTCATCTTCACAGGAGTaGATCGCTGAGAGATGGAGCCTTCATCTTCCCGGTCGGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSLWHCLPCQSSSQE*IAERWSLHLPGRCQ Trigger: CTGGCACCGACCGGGAAGATGAAGGCTCCATCTCTCAGCGATCCACTCCTGTGAAGATGACTGACACGGGAGACAGTGCCAAAGCGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGCACGCCGGTCTCCACCTCATTaGCAACGTCACCCTCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QVLGSPLPMSCISGSGARRSPPH*QRHPHS Trigger: ACTGTGAGGGTGACGTTGCAAATGAGGTGGAGACCG...GCGTGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | ATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGCCGTCTTACTCTTGGTGTACTaGGCCATGTCCCAGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISGSGARLLTEDTVLEAVLLLVY*AMSQGM Trigger: CATCCCCTGGGACATGGCCAAGTACACCAAGAGTAA...GACGGCCTCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTGGGGCACGCGGGCTGCATGATACCTaGGCTAGCTTGGATATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVLGSPLPMSCISGSGARGLHDT*ASLDMG Trigger: GCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCC...GCGTGCCCCAGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | TTGGCACTGTCTCCCGTGTCAGTCATCTTCACAGGAGTGGATCGCTaGGAGATGGAGCCTTCATCTTCCCGGTCGGTGCCAGAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LALSPVSVIFTGVDR*EMEPSSSRSVPESS Trigger: GGATGACTCTGGCACCGACCGGGAAGATGAAGGCTCCATCTCTCAGCGATCCACTCCTGTGAAGATGACTGACACGGGAGACAGTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | GCCGAACCTCTGGAGCATCTGGTCAAAGTGAAGAGCAGCCACGTGTaGAAAGGGATCCGCCTGGTCCAGTGTAATGGGTGGTTTCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AEPLEHLVKVKSSHV*KGIRLVQCNGWFRH Trigger: ATGCCGAAACCACCCATTACACTGGACCAGGCGGATCCCTTTGCACACGTGGCTGCTCTTCACTTTGACCAGATGCTCCAGAGGTTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | TGTCTCCCGTGTCAGTCATCTTCACAGGAGTGGATCGCTGAGAGATaGAGCCTTCATCTTCCCGGTCGGTGCCAGAGTCATCCTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLPCQSSSQEWIAER*SLHLPGRCQSHPQS Trigger: GCTCTGAGGATGACTCTGGCACCGACCGGGAAGATGAAGGCTCCATCTCTCAGCGATCCACTCCTGTGAAGATGACTGACACGGGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | AAGATGATGATGGGGGAGCCGAACCTCTGGAGCATCTGGTCAAAGTaGAGAGCAGCCACGTGTGCAAAGGGATCCGCCTGGTCCAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KMMMGEPNLWSIWSK*RAATCAKGSAWSSV Trigger: TACACTGGACCAGGCGGATCCCTTTGCACACGTGGCTGCTCTTCACTTTGACCAGATGCTCCAGAGGTTCGGCTCCCCCATCATCATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | GCCCTAAGGAATACAGCTGGTAAGCCAGGGCACACTTGCCCACCATaGACTGCGCAGTGTTGGTGCGATCCAAACAGTCCACACAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALRNTAGKPGHTCPP*TAQCWCDPNSPHSW Trigger: CCAACTGTGTGGACTGTTTGGATCGCACCAACACTGCGCAGTTCATGGTGGGCAAGTGTGCCCTGGCTTACCAGCTGTATTCCTTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | CAGCATCCGAGAAGGCGTTGCTGTAGTACCGGGACAGAGTCTGCATaGTGTCCTTGGAGTGCTGGGTCCACGGTGCTATCTTTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QHPRRRCCSTGTESA*CPWSAGSTVLSFCR Trigger: CCTACAGAAAGATAGCACCGTGGACCCAGCACTCCAAGGACATCATGCAGACTCTGTCCCGGTACTACAGCAACGCCTTCTCGGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | CCGGGACAGAGTCTGCATGATGTCCTTGGAGTGCTGGGTCCACGGTaGTATCTTTCTGTAGGTCTTTACCCGATGAACCAGCTGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGQSLHDVLGVLGPR*YLSVGLYPMNQLRA Trigger: GGCTCTCAGCTGGTTCATCGGGTAAAGACCTACAGAAAGATAGCACCGTGGACCCAGCACTCCAAGGACATCATGCAGACTCTGTCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | TGTAGACAATGGTGTGCTCCGGTGGCAGGAACTGGTTCAGGTAAGTaGCCGCAGCCACCAGCTCTTCACTCAGGATCCTTTCGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRQWCAPVAGTGSGK*PQPPALHSGSFRAF Trigger: GAAAGCACGAAAGGATCCTGAGTGAAGAGCTGGTGGCTGCGGTCACTTACCTGAACCAGTTCCTGCCACCGGAGCACACCATTGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | CATTCAGCCGATCGAGAACGTTGCACAGCTTACTCTTGGTGTACTTaGCCATGTCCCAGGGGATGTAGACAATGGTGTGCTCCGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSADRERCTAYSWCT*PCPRGCRQWCAPVA Trigger: TGCCACCGGAGCACACCATTGTCTACATCCCCTGGGACATGGCCAAGTACACCAAGAGTAAGCTGTGCAACGTTCTCGATCGGCTGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | CTGATGTACTCCCGGTACATGGCAGTGTCCTCTTTGCCAAGGGGCTaGATGATACCTTGGCTAGCTTGGATATGGGCCTGGAAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMYSRYMAVSSLPRG*MIPWLAWIWAWKIS Trigger: AGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGCCATGTACCGGGAGTACATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CAA 90 bp | GAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGACTGTTTATGTTGACTTaGCCCCAGCTGAACAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: ELHLRIWGTPSHRGHCPRLFMLT*PQLNKP Trigger: AGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAG...TCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 90 bp | ACTCCAAAAGCTGAGACGGCTCGAAACAACCCGGAGGATCCTTTCTaGCTCATCTTTGTTCTGTTTCCCAGATCCAGGCGGCCAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPKAETARNNPEDPF*LIFVLFPRSRRPRS Trigger: ACTTCTTGGCCGCCTGGATCTGGGAAACAGAACAAAGATGAGCCAGAAAGGATCCTCCGGGTTGTTTCGAGCCGTCTCAGCTTTTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CAA 90 bp | ATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCCTCGAGGCCGTCACACCCAAAAACAGGTaGATGGAATCTTGTCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISGSGARLLTEDTVLEAVTPKNR*MESCLS Trigger: TGATAGACAAGATTCCATCAACCTGTTTTTGGGTGT...GACGGCCTCGAGGACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | TGGCATAAATGGAGTGATCCTCCTCTGACAGGCTACTGGAGAGACTaGCTCCATACACTTCCTTCATGGGCTGGACCACATTCTCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WHKWSDPPLTGYWRD*LHTLPSWAGPHSQS Trigger: CGACTGAGAATGTGGTCCAGCCCATGAAGGAAGTGTATGGAGTCAGTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCCATTTATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | TTGCCCCAGCTGAACAAACCTGGCATAAATGGAGTGATCCTCCTCTaGCAGGCTACTGGAGAGACTGACTCCATACACTTCCTTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPQLNKPGINGVILL*QATGETDSIHFLHG Trigger: CCCATGAAGGAAGTGTATGGAGTCAGTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | TCCTCTTTGCCAAGGGGCTGCATGATACCTTGGCTAGCTTGGATATaGGCCTGGAAGATCTCTGTAGACTTTCTGTCTACTCTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLPRGCMIPWLAWI*AWKISVDFLSTLGG Trigger: GCCTCCAAGAGTAGACAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | GCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTTCGGTCCTGTTTATGTaGACTTTGCCCCAGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AVIQVLGSPLPMSCISGSSVLFM*TLPQLN Trigger: GTTCAGCTGGGGCAAAGTCAACATAAACAGGACCGA...AGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | TTGGTTCGAAGGATGCCAGTCTGGAGCCGACCAGTGGGAATCACATaGCCTCCTAGTTCATTCCACTTTTCATCTGGCCGTAAAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVRRMPVWSRPVGIT*PPSSFHFSSGRKML Trigger: CAGCATTTTACGGCCAGATGAAAAGTGGAATGAACTAGGAGGTCATGTGATTCCCACTGGTCGGCTCCAGACTGGCATCCTTCGAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | TACCTCGGTCCTGTTTATGTTGACTTTGCCCCAGCTGAACAAACCTaGCATAAATGGAGTGATCCTCCTCTGACAGGCTACTGGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLGPVYVDFAPAEQT*HKWSDPPLTGYWRD Trigger: GTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAGGACCGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | GCAGTGTCCTCTTTGCCAAGGGGCTGCATGATACCTTGGCTAGCTTaGATATGGGCCTGGAAGATCTCTGTAGACTTTCTGTCTACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVSSLPRGCMIPWLA*IWAWKISVDFLSTL Trigger: AAGAGTAGACAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | ATCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATAAGTTCCCTCACTTCTaGTTGTGTGTACACGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITEGCDTGAGESFTNELHKFPHF*LCVHVP Trigger: AGGCACGTGTACACACAACAAGAAGTGAGGGAACTT...ATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | CCAATGAGCTGCATCTCAGGATCTGGGGCACGCCTTCTCACAGAGGACACTGTCAACGGATCCTCTAACTaGTACGTAAGAAGAGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PMSCISGSGARLLTEDTVNGSSN*YVRRVT Trigger: AGTTACTCTTCTTACGTACAAGTTAGAGGATCCGTT...GACAGTGTCCTCTGTGAGAAGGCGTGCCCCAGATCCTGAGATGCAGCTCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | GCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCTCAGGATCTCTTTCTGGCTCATCTTaGTTCTGTTTCCCAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVIQVLGSPLPMSCISGSLSGSS*FCFPDP Trigger: TGGATCTGGGAAACAGAACAAAGATGAGCCAGAAAG...AGATCCTGAGATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | TCACCGAAGGCTGTGATACAGGTGCTGGGGAGTCCTTTACCAATGAGCTGCATCACTTTCTGTCTACTCTaGGAGGCTGAACTTCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKAVIQVLGSPLPMSCITFCLL*EAELHK Trigger: TTTATGAAGTTCAGCCTCCAAGAGTAGACAGAAAGT...GATGCAGCTCATTGGTAAAGGACTCCCCAGCACCTGTATCACAGCCTTCGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | ACAGGCACCTACTTGAGTATAGGTGCCTACAAAATCTGGAAGACAACACTGGATAAACAGTCCACACAGTaGGTTCGAAGGATGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TGTYLSIGAYKIWKTTLDKQSTQ*VRRMPV Trigger: GACTGGCATCCTTCGAACCAACTGTGTGGACTGTTT...ATCCAGTGTTGTCTTCCAGATTTTGTAGGCACCTATACTCAAGTAGGTGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 90 bp | CCCTGTGTAATTAATCCTTCATCTTCAAAGATGTCGAAGCTCTCCTaGCACGCCTTGGATGTTTCTGACTTTAACATCTCCAGGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PCVINPSSSKMSKLS*HALDVSDFNISRGI Trigger: AATGCCCCTGGAGATGTTAAAGTCAGAAACATCCAAGGCGTGCCAGGAGAGCTTCGACATCTTTGAAGATGAAGGATTAATTACACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 90 bp | GGTTCTGTTCTATCAATTTTCAGGACACGGTACTTCGTTTCTGCATaGTTGCTCCCAACTAGAAAGTATCTAGCTCTGGTCTCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVLSIFRTRYFVSA*LLPTRKYLALVSYS Trigger: GCTGTATGAGACCAGAGCTAGATACTTTCTAGTTGGGAGCAATCATGCAGAAACGAAGTACCGTGTCCTGAAAATTGATAGAACAGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | TCACATGACCTCCTAGTTCATTCCACTTTTCATCTGGCCGTAAAATaGTGCAGTAAGAATCAGGGCGGTTTACAAAGAATCCTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SHDLLVHSTFHLAVK*CSKNQGGLQRILSS Trigger: AGAAGACAGGATTCTTTGTAAACCGCCCTGATTCTTACTGCAGCATTTTACGGCCAGATGAAAAGTGGAATGAACTAGGAGGTCATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 90 bp | CATGACCTCCTAGTTCATTCCACTTTTCATCTGGCCGTAAAATGCTaGAGTAAGAATCAGGGCGGTTTACAAAGAATCCTGTCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HDLLVHSTFHLAVKC*SKNQGGLQRILSSL Trigger: TAAAGAAGACAGGATTCTTTGTAAACCGCCCTGATTCTTACTGCAGCATTTTACGGCCAGATGAAAAGTGGAATGAACTAGGAGGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | TTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCGATACCTTGGCTAGCTaGGATATGGGCCTGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FYYFYCVCAYMCVYALLCDTLAS*DMGLED Trigger: ATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATC...GCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS-3UTR CAA 90 bp | TTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCATAATCACGTGCTGAACTaGTCATGGCCAAGCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFLLCVCIHVCVCTPVHNHVLN*SWPSKR Trigger: CCTTTTGCTTGGCCATGACAAGTTCAGCACGTGATT...ATGCACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS-3UTR CAA 90 bp | CTTTTATTATTTTTACTGTGTGTGTGCATACATGTGTGTGTATGCACTCCTGTGCTTCAATCTTATAAATaGCATGACCTCCAATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFLLCVCIHVCVCTPVLQSYK*HDLQCL Trigger: CAGACATTGGAGGTCATGCAATTTATAAGATTGAAG...CACAGGAGTGCATACACACACATGTATGCACACACACAGTAAAAATAATAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CTCAGAGCTGCTGGACACAGCCTCCTCGCTCGGGGGTaGCGGGGCGCTGGCTGCCGTCTTCCGCTGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRAAGHSLLARG*RGAGCRLPLQD Trigger: GTCCTGCAGCGGAAGACGGCAGCCAGCGCCCCGCCACCCCCGAGCGAGGAGGCTGTGTCCAGCAGCTCTGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | CACAGCCTCCTCGCTCGGGGGTGGCGGGGCGCTGGCTaGCGTCTTCCGCTGCAGGACAGCTTCCTCTCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSLLARGWRGAG*RLPLQDSFLSS Trigger: ACTAGAGAGGAAGCTGTCCTGCAGCGGAAGACGGCAGCCAGCGCCCCGCCACCCCCGAGCGAGGAGGCTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | ATGGGGGAGCCGAACCTCTGGAGCATCTGGTCAAAGTaGAGAGCAGCCACGTGTGCAAAGGGATCCGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MGEPNLWSIWSK*RAATCAKGSAW Trigger: CCAGGCGGATCCCTTTGCACACGTGGCTGCTCTTCACTTTGACCAGATGCTCCAGAGGTTCGGCTCCCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | AAGTATCTAGCTCTGGTCTCATACAGCACCAGCTTCTaGACCGAGCTGATGATGGGGGCAGCGGCCGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KYLALVSYSTSF*TELMMGAAAVG Trigger: GCCCACGGCCGCTGCCCCCATCATCAGCTCGGTCCAGAAGCTGGTGCTGTATGAGACCAGAGCTAGATACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CATGTCCCAGGGGATGTAGACAATGGTGTGCTCCGGTaGCAGGAACTGGTTCAGGTAAGTGACCGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVPGDVDNGVLR*QELVQVSDRSH Trigger: GTGGCTGCGGTCACTTACCTGAACCAGTTCCTGCCACCGGAGCACACCATTGTCTACATCCCCTGGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | TGGTGTGCTCCGGTGGCAGGAACTGGTTCAGGTAAGTaGCCGCAGCCACCAGCTCTTCACTCAGGATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WCAPVAGTGSGK*PQPPALHSGSF Trigger: AAAGGATCCTGAGTGAAGAGCTGGTGGCTGCGGTCACTTACCTGAACCAGTTCCTGCCACCGGAGCACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | TGCGCAGTGTTGGTGCGATCCAAACAGTCCACACAGTaGGTTCGAAGGATGCCAGTCTGGAGCCGACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CAVLVRSKQSTQ*VRRMPVWSRPV Trigger: CACTGGTCGGCTCCAGACTGGCATCCTTCGAACCAACTGTGTGGACTGTTTGGATCGCACCAACACTGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | GCCAGGGCACACTTGCCCACCATGAACTGCGCAGTGTaGGTGCGATCCAAACAGTCCACACAGTTGGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARAHLPTMNCAV*VRSKQSTQLVR Trigger: TCGAACCAACTGTGTGGACTGTTTGGATCGCACCAACACTGCGCAGTTCATGGTGGGCAAGTGTGCCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | AGAAGGCGTTGCTGTAGTACCGGGACAGAGTCTGCATaGTGTCCTTGGAGTGCTGGGTCCACGGTGCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRCCSTGTESA*CPWSAGSTVLS Trigger: AGATAGCACCGTGGACCCAGCACTCCAAGGACATCATGCAGACTCTGTCCCGGTACTACAGCAACGCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | TGGTGTACTTGGCCATGTCCCAGGGGATGTAGACAATaGTGTGCTCCGGTGGCAGGAACTGGTTCAGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: WCTWPCPRGCRQ*CAPVAGTGSGK Trigger: CTTACCTGAACCAGTTCCTGCCACCGGAGCACACCATTGTCTACATCCCCTGGGACATGGCCAAGTACACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | TGGCACTGTCTCCCGTGTCAGTCATCTTCACAGGAGTaGATCGCTGAGAGATGGAGCCTTCATCTTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WHCLPCQSSSQE*IAERWSLHLPG Trigger: ACCGGGAAGATGAAGGCTCCATCTCTCAGCGATCCACTCCTGTGAAGATGACTGACACGGGAGACAGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 90 bp | ACCATGAACTGCGCAGTGTTGGTGCGATCCAAACAGTCCACACAGTaGGTTCGAAGGATGCCAGTCTGGAGCCGACCAGTGGGAATCACA | + |
|
Preference number: 6 (lower is better) Translates to: TMNCAVLVRSKQSTQ*VRRMPVWSRPVGIT Trigger: TGTGATTCCCACTGGTCGGCTCCAGACTGGCATCCTTCGAACCAACTGTGTGGACTGTTTGGATCGCACCAACACTGCGCAGTTCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | CATTTGCAACGTCACCCTCACAGTTTGCGCCTCTCTTaGGAAAGCGCGTCCCAGCAAACCTACTGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLQRHPHSLRLS*ESASQQTYWIS Trigger: GGAGATCCAGTAGGTTTGCTGGGACGCGCTTTCTCAAGAGAGGCGCAAACTGTGAGGGTGACGTTGCAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | AATACAGCTGGTAAGCCAGGGCACACTTGCCCACCATaGACTGCGCAGTGTTGGTGCGATCCAAACAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NTAGKPGHTCPP*TAQCWCDPNSP Trigger: TGGACTGTTTGGATCGCACCAACACTGCGCAGTTCATGGTGGGCAAGTGTGCCCTGGCTTACCAGCTGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | AGCATCACAGAGGATCTGCTCGGTCTCCACCTCATTTaGAACGTCACCCTCACAGTTTGCGCCTCTCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SITEDLLGLHLI*NVTLTVCASLE Trigger: CTCAAGAGAGGCGCAAACTGTGAGGGTGACGTTGCAAATGAGGTGGAGACCGAGCAGATCCTCTGTGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | TGCGATCCAAACAGTCCACACAGTTGGTTCGAAGGATaGCAGTCTGGAGCCGACCAGTGGGAATCACATGAC | + |
|
Preference number: 6 (lower is better) Translates to: CDPNSPHSWFEG*QSGADQWESHD Trigger: GTCATGTGATTCCCACTGGTCGGCTCCAGACTGGCATCCTTCGAACCAACTGTGTGGACTGTTTGGATCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | TGTCAGTCATCTTCACAGGAGTGGATCGCTGAGAGATaGAGCCTTCATCTTCCCGGTCGGTGCCAGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CQSSSQEWIAER*SLHLPGRCQSH Trigger: ATGACTCTGGCACCGACCGGGAAGATGAAGGCTCCATCTCTCAGCGATCCACTCCTGTGAAGATGACTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CTTCCTTCATGGGCTGGACCACATTCTCAGTCGCTTTaGCACTGTCTCCCGTGTCAGTCATCTTCACAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSWAGPHSQSL*HCLPCQSSSQE Trigger: CTCCTGTGAAGATGACTGACACGGGAGACAGTGCCAAAGCGACTGAGAATGTGGTCCAGCCCATGAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CTGGAGAGACTGACTCCATACACTTCCTTCATGGGCTaGACCACATTCTCAGTCGCTTTGGCACTGTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LERLTPYTSFMG*TTFSVALALSP Trigger: GGGAGACAGTGCCAAAGCGACTGAGAATGTGGTCCAGCCCATGAAGGAAGTGTATGGAGTCAGTCTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | TCCCAGATCCAGGCGGCCAAGAAGTTCCCTCACTTCTaGTTGTGTGTACACGTGCCTGTCGTCGATTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQIQAAKKFPHF*LCVHVPVVDYH Trigger: GTGGTAATCGACGACAGGCACGTGTACACACAACAAGAAGTGAGGGAACTTCTTGGCCGCCTGGATCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | GGCAGTGTCCTCTTTGCCAAGGGGCTGCATGATACCTaGGCTAGCTTGGATATGGGCCTGGAAGATCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSVLFAKGLHDT*ASLDMGLEDLC Trigger: ACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 90 bp | TCTGTTTCCCAGATCCAGGCGGCCAAGAAGTTCCCTCACTTCTTGTaGTGTGTACACGTGCCTGTCGTCGATTACCACCAAGTCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SVSQIQAAKKFPHFL*CVHVPVVDYHQVLR Trigger: CCGAAGGACTTGGTGGTAATCGACGACAGGCACGTGTACACACAACAAGAAGTGAGGGAACTTCTTGGCCGCCTGGATCTGGGAAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | AGGATGCCAGTCTGGAGCCGACCAGTGGGAATCACATaGCCTCCTAGTTCATTCCACTTTTCATCTGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RMPVWSRPVGIT*PPSSFHFSSGR Trigger: ACGGCCAGATGAAAAGTGGAATGAACTAGGAGGTCATGTGATTCCCACTGGTCGGCTCCAGACTGGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | TGGAGTGATCCTCCTCTGACAGGCTACTGGAGAGACTaGCTCCATACACTTCCTTCATGGGCTGGACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: WSDPPLTGYWRD*LHTLPSWAGPH Trigger: ATGTGGTCCAGCCCATGAAGGAAGTGTATGGAGTCAGTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | CGCTTTCCGCAATCACATTCAGCCGATCGAGAACGTTaGACAGCTTACTCTTGGTGTACTTGGCCATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RFPQSHSADRER*TAYSWCTWPCP Trigger: GGGACATGGCCAAGTACACCAAGAGTAAGCTGTGCAACGTTCTCGATCGGCTGAATGTGATTGCGGAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | GCAGTGTCCTCTTTGCCAAGGGGCTGCATGATACCTTaGCTAGCTTGGATATGGGCCTGGAAGATCTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AVSSLPRGCMIP*LAWIWAWKISV Trigger: TACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | CAGATCCAGGCGGCCAAGAAGTTCCCTCACTTCTTGTaGTGTGTACACGTGCCTGTCGTCGATTACCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: QIQAAKKFPHFL*CVHVPVVDYHQ Trigger: TTGGTGGTAATCGACGACAGGCACGTGTACACACAACAAGAAGTGAGGGAACTTCTTGGCCGCCTGGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | TCATTTGCAACGTCACCCTCACAGTTTGCGCCTCTCTaGAGAAAGCGCGTCCCAGCAAACCTACTGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFATSPSQFAPL*RKRVPANLLDL Trigger: GAGATCCAGTAGGTTTGCTGGGACGCGCTTTCTCAAGAGAGGCGCAAACTGTGAGGGTGACGTTGCAAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | ACTTCCTTCATGGGCTGGACCACATTCTCAGTCGCTTaGGCACTGTCTCCCGTGTCAGTCATCTTCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSFMGWTTFSVA*ALSPVSVIFTG Trigger: TCCTGTGAAGATGACTGACACGGGAGACAGTGCCAAAGCGACTGAGAATGTGGTCCAGCCCATGAAGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | TTTCTGATGTACTCCCGGTACATGGCAGTGTCCTCTTaGCCAAGGGGCTGCATGATACCTTGGCTAGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLMYSRYMAVSS*PRGCMIPWLAW Trigger: CCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGCCATGTACCGGGAGTACATCAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 90 bp | TGTTCTGTTTCCCAGATCCAGGCGGCCAAGAAGTTCCCTCACTTCTaGTTGTGTGTACACGTGCCTGTCGTCGATTACCACCAAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSVSQIQAAKKFPHF*LCVHVPVVDYHQVL Trigger: AAGGACTTGGTGGTAATCGACGACAGGCACGTGTACACACAACAAGAAGTGAGGGAACTTCTTGGCCGCCTGGATCTGGGAAACAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 90 bp | ACGGGAACACAGCTGCTGGTTACCTCGGTCCTGTTTATGTTGACTTaGCCCCAGCTGAACAAACCTGGCATAAATGGAGTGATCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGTQLLVTSVLFMLT*PQLNKPGINGVILL Trigger: GAGGAGGATCACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAGGACCGAGGTAACCAGCAGCTGTGTTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 90 bp | GGCAGTGTCCTCTTTGCCAAGGGGCTGCATGATACCTTGGCTAGCTaGGATATGGGCCTGGAAGATCTCTGTAGACTTTCTGTCTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVLFAKGLHDTLAS*DMGLEDLCRLSVYS Trigger: AGAGTAGACAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAGGACACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | GCGGTAAAAGACATCACAGAAGCATCACAGAGGATCTaGTCGGTCTCCACCTCATTTGCAACGTCACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVKDITEASQRI*SVSTSFATSPS Trigger: TGAGGGTGACGTTGCAAATGAGGTGGAGACCGAGCAGATCCTCTGTGATGCTTCTGTGATGTCTTTTACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CATTCAGCCGATCGAGAACGTTGCACAGCTTACTCTTaGTGTACTTGGCCATGTCCCAGGGGATGTAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: HSADRERCTAYS*CTWPCPRGCRQ Trigger: TTGTCTACATCCCCTGGGACATGGCCAAGTACACCAAGAGTAAGCTGTGCAACGTTCTCGATCGGCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | GTTGACTTTGCCCCAGCTGAACAAACCTGGCATAAATaGAGTGATCCTCCTCTGACAGGCTACTGGAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VDFAPAEQTWHK*SDPPLTGYWRD Trigger: GTCTCTCCAGTAGCCTGTCAGAGGAGGATCACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | ACGCTTTCCGCAATCACATTCAGCCGATCGAGAACGTaGCACAGCTTACTCTTGGTGTACTTGGCCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLSAITFSRSRT*HSLLLVYLAMS Trigger: GGACATGGCCAAGTACACCAAGAGTAAGCTGTGCAACGTTCTCGATCGGCTGAATGTGATTGCGGAAAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | CCAAGAAGTTCCCTCACTTCTTGTTGTGTGTACACGTaGCTGTCGTCGATTACCACCAAGTCCTTCGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRSSLTSCCVYT*LSSITTKSFGS Trigger: AGAACCGAAGGACTTGGTGGTAATCGACGACAGGCACGTGTACACACAACAAGAAGTGAGGGAACTTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | AGTTGGTTCGAAGGATGCCAGTCTGGAGCCGACCAGTaGGAATCACATGACCTCCTAGTTCATTCCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SWFEGCQSGADQ*ESHDLLVHSTF Trigger: AAAAGTGGAATGAACTAGGAGGTCATGTGATTCCCACTGGTCGGCTCCAGACTGGCATCCTTCGAACCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | GGCTCATGGTGTTTTTGTGATGGAGGTAAAAGTCTGTaGGGAGTTCCCAGAGATGAGGTTTCCCTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSWCFCDGGKSL*GVPRDEVSLLW Trigger: CCACAGAAGGGAAACCTCATCTCTGGGAACTCCCCACAGACTTTTACCTCCATCACAAAAACACCATGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | CCAAGGGGCTGCATGATACCTTGGCTAGCTTGGATATaGGCCTGGAAGATCTCTGTAGACTTTCTGTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: PRGCMIPWLAWI*AWKISVDFLST Trigger: AGTAGACAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | TCTTTGCCAAGGGGCTGCATGATACCTTGGCTAGCTTaGATATGGGCCTGGAAGATCTCTGTAGACTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPRGCMIPWLA*IWAWKISVDFL Trigger: CAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | CAGCTGCTGGTTACCTCGGTCCTGTTTATGTTGACTTaGCCCCAGCTGAACAAACCTGGCATAAATGGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLVTSVLFMLT*PQLNKPGINGV Trigger: CACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAGGACCGAGGTAACCAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CAA 72 bp | CTCTTTGCCAAGGGGCTGCATGATACCTTGGCTAGCTaGGATATGGGCCTGGAAGATCTCTGTAGACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFAKGLHDTLAS*DMGLEDLCRLS Trigger: AGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCCCCTTGGCAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | AGTTCCTCAAACAACCTCACTGCATCCGTGTCGAACTaGAGGTTAGGCTTGTCAATCAGCCCTAAGGAATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSNNLTASVSN*RLGLSISPKEY Trigger: GTATTCCTTAGGGCTGATTGACAAGCCTAACCTGCAGTTCGACACGGATGCAGTGAGGTTGTTTGAGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 72 bp | CCTGTTTATGTTGACTTTGCCCCAGCTGAACAAACCTaGCATAAATGGAGTGATCCTCCTCTGACAGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: PVYVDFAPAEQT*HKWSDPPLTGY Trigger: GTAGCCTGTCAGAGGAGGATCACTCCATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CCA 72 bp | GGCTGCATGATACCTTGGCTAGCTTGGATATGGGCCTaGAAGATCTCTGTAGACTTTCTGTCTACTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCMIPWLAWIWA*KISVDFLSTLG Trigger: TCCAAGAGTAGACAGAAAGTCTACAGAGATCTTCCAGGCCCATATCCAAGCTAGCCAAGGTATCATGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS CAA 72 bp | GGAACACAGCTGCTGGTTACCTCGGTCCTGTTTATGTaGACTTTGCCCCAGCTGAACAAACCTGGCATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTQLLVTSVLFM*TLPQLNKPGIN Trigger: ATTTATGCCAGGTTTGTTCAGCTGGGGCAAAGTCAACATAAACAGGACCGAGGTAACCAGCAGCTGTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS GCA 72 bp | TCCATGGTCTTCATAGAGTTCCTCAAACAACCTCACTaGATCCGTGTCGAACTGCAGGTTAGGCTTGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SMVFIEFLKQPH*IRVELQVRLVN Trigger: ATTGACAAGCCTAACCTGCAGTTCGACACGGATGCAGTGAGGTTGTTTGAGGAACTCTATGAAGACCATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
||
| CDS TCA 72 bp | AGATCAAAAGCTTGGACTGCCCGCAGAACCCATGAATaGTATACAATAGCCAGTCACGATGCACAGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSKAWTARRTHE*YTIASHDAQCF Trigger: AAAACACTGTGCATCGTGACTGGCTATTGTATATCATTCATGGGTTCTGCGGGCAGTCCAAGCTTTTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | GGATCCTCTAACTTGTACGTAAGAAGAGTAACTGCCTaGGGTAAAAGACATCACAGAAGCATCACAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: GSSNLYVRRVTA*GKRHHRSITED Trigger: ATCCTCTGTGATGCTTCTGTGATGTCTTTTACCGCAGGCAGTTACTCTTCTTACGTACAAGTTAGAGGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | GGCCTGGAAGATCTCTGTAGACTTTCTGTCTACTCTTaGAGGCTGAACTTCATAAATGTTGTCTTGCGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLEDLCRLSVYS*RLNFINVVLRE Trigger: TTCTCGCAAGACAACATTTATGAAGTTCAGCCTCCAAGAGTAGACAGAAAGTCTACAGAGATCTTCCAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS TCA 72 bp | CTATCAATTTTCAGGACACGGTACTTCGTTTCTGCATaGTTGCTCCCAACTAGAAAGTATCTAGCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSIFRTRYFVSA*LLPTRKYLALV Trigger: GACCAGAGCTAGATACTTTCTAGTTGGGAGCAATCATGCAGAAACGAAGTACCGTGTCCTGAAAATTGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS GCA 72 bp | CTCCTAGTTCATTCCACTTTTCATCTGGCCGTAAAATaGTGCAGTAAGAATCAGGGCGGTTTACAAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: LLVHSTFHLAVK*CSKNQGGLQRI Trigger: GATTCTTTGTAAACCGCCCTGATTCTTACTGCAGCATTTTACGGCCAGATGAAAAGTGGAATGAACTAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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| CDS CCA 72 bp | ATTAATCCTTCATCTTCAAAGATGTCGAAGCTCTCCTaGCACGCCTTGGATGTTTCTGACTTTAACATCTCC | + |
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Preference number: 6 (lower is better) Translates to: INPSSSKMSKLS*HALDVSDFNIS Trigger: GGAGATGTTAAAGTCAGAAACATCCAAGGCGTGCCAGGAGAGCTTCGACATCTTTGAAGATGAAGGATTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043814.5 |
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