Pregenerated sensors for FICD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053334Ensembl transcript IDs: ENSMUST00000065698.7
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGAGCCTCCCATGAGACTTGGTGTGCAGAGAAGAGCCAGGAGCTaGGGGCCGCGTCCTGCAGAGCTGTTGACGGTGCTGCACGCACAC | + |
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Preference number: 1 (lower is better) Translates to: SEPPMRLGVQRRARS*GPRPAELLTVLHAH Trigger: GTGTGCGTGCAGCACCGTCAACAGCTCTGCAGGACGCGGCCCCCAGCTCCTGGCTCTTCTCTGCACACCAAGTCTCATGGGAGGCTCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR TCA 90 bp | GTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACTaGGTGGGAGGTGAAGGCAGACCTGCTCTGTGGAGTGAGGGGGTA | + |
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Preference number: 1 (lower is better) Translates to: VVFSRQASPPVSSED*VGGEGRPALWSEGV Trigger: TACCCCCTCACTCCACAGAGCAGGTCTGCCTTCACCTCCCACTCAGTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 90 bp | TGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTaGCACAGCCTCTCAGGAATAAAACCCCACCTTAGCACAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CNLLLAKGWAASRSC*HSLSGIKPHLSTGQ Trigger: CTGCCCTGTGCTAAGGTGGGGTTTTATTCCTGAGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 90 bp | ATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTaGTGCCACAGCCTCTCAGGAATAAAACCCCACCTTAGCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: ICNLLLAKGWAASRS*CHSLSGIKPHLSTG Trigger: CCCTGTGCTAAGGTGGGGTTTTATTCCTGAGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 90 bp | CAAGTTAATAGCTCAGAGGGTCTTCGGAAATCTGCAACCTCCTACTaGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: QVNSSEGLRKSATSY*QRAGLPVEAAATAS Trigger: AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCCTCTGAGCTATTAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 90 bp | TCTCAGATACACCCTTTTGTAATGTTAGGGCAGGTGCCTTGTGTGTaGTGCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGT | + |
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Preference number: 1 (lower is better) Translates to: SQIHPFVMLGQVPCV*CMLGSILPPSVTSR Trigger: ACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGCACCACACACAAGGCACCTGCCCTAACATTACAAAAGGGTGTATCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 90 bp | GGTGGCTGGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTaGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: GGWYEFPIQTKSAVR*DTVGCLRTKSSDVA Trigger: GGCTACGTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATACCAGCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 90 bp | CTGTCAGAGTATCTTTCTAAACGCTGGATACCATCGTTTGGTGGCTaGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LSEYLSKRWIPSFGG*YEFPIQTKSAVRWD Trigger: GTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATACCAGCCACCAAACGATGGTATCCAGCGTTTAGAAAGATACTCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTAAGGTTGCAGCCTTCTaGGGTCTCAGGACCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TSYWQRAGLPVEAAATASKVAAF*GLRTSK Trigger: CTTGGAGGTCCTGAGACCTCAGAAGGCTGCAACCTT...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTGGTTCTGCCCAAGGTTaGAGCCTTCTGAGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TSYWQRAGLPVEAAATASGSAQG*SLLRSQ Trigger: CTGAGACCTCAGAAGGCTGCAACCTTGGGCAGAACC...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR GCA 90 bp | GCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACTGCCTCTGCCCTTCGTaGAAAGTCTGTCTAGACACC | + |
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Preference number: 2 (lower is better) Translates to: ACWVVFSRQASPPVSSEDCLCPS*KVCLDT Trigger: GGTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCA...GTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR GCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGATTAGAAAAGCACTGCTaGCCTACTGGGTTCCGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSSEICNLLLAKGWAASRLEKHC*PTGFRD Trigger: ATCCCGGAACCCAGTAGGGCAGCAGTGCTTTTCTAA...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGTGCAGTGCGCTGGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACCCTCAGAAGACTGAGTaGGAGGTGAAGGCAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: KSAVRWDTVGCLRTKSSDPQKTE*EVKADL Trigger: CAGGTCTGCCTTCACCTCCCACTCAGTCTTCTGAGG...GTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR TCA 90 bp | TGGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTGGGACACTGTAGGCAGACTGAGTGGGAGGTaGAGGCAGACCTGCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: WYEFPIQTKSAVRWDTVGRLSGR*RQTCSV Trigger: CACAGAGCAGGTCTGCCTTCACCTCCCACTCAGTCT...GCCTACAGTGTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGTGCAGTGCGCTGGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACAGATCTCTCTGCCTCTaGCCTTCGTGCAAAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: KSAVRWDTVGCLRTKSSDRSLCL*PSCKVC Trigger: ACAGACTTTGCACGAAGGGCAGAGGCAGAGAGATCT...GTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR TCA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATCTGCTTATTTGGGGTTaGTGCGGTTTCTCAGATACA | + |
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Preference number: 2 (lower is better) Translates to: SDVAIMTLNSSSQIGISHLLIWG*CGFSDT Trigger: TGTATCTGAGAAACCGCATCAACCCCAAATAAGCAG...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CAA 90 bp | TCAGAAAACTGTCAGAGTATCTTTCTAAACGCTGGATACCATCGTTaGGTGGCTGGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SENCQSIFLNAGYHR*VAGMSFQFKQKVQC Trigger: GCACTGCACTTTTTGTTTGAATTGGAAACTCATACCAGCCACCAAACGATGGTATCCAGCGTTTAGAAAGATACTCTGACAGTTTTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | CTGCCCTACTGGGTTCCGGGATCACCACAGGTGTTGTaGTCGCAGCACCACTCGGTCGCTGCTAGCTCACCA | + |
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Preference number: 3 (lower is better) Translates to: LPYWVPGSPQVL*SQHHSVAASSP Trigger: TGGTGAGCTAGCAGCGACCGAGTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | GCCAAGCGTCACCTCCCGTGTCCTCAGAAGACTGAGTaGGAGGTGAAGGCAGACCTGCTCTGTGGAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: AKRHLPCPQKTE*EVKADLLCGVR Trigger: CCTCACTCCACAGAGCAGGTCTGCCTTCACCTCCCACTCAGTCTTCTGAGGACACGGGAGGTGACGCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | AAGCCCTTCTGCCTGCCCTCCACCCTTAGAACAGTCTaGGCAGGGAAGCGCTATCCCCTGCCACTCAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: KPFCLPSTLRTV*AGKRYPLPLRL Trigger: TAACCTGAGTGGCAGGGGATAGCGCTTCCCTGCCCAGACTGTTCTAAGGGTGGAGGGCAGGCAGAAGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | AGCTCAGAGGGTCTTCGGAAATCTGCAACCTCCTACTaGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SSEGLRKSATSY*QRAGLPVEAAA Trigger: GGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCCTCTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 72 bp | CTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTaGCACAGCCTCTCAGGAATAAAACCCCACCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: LLAKGWAASRSC*HSLSGIKPHLS Trigger: GCTAAGGTGGGGTTTTATTCCTGAGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 72 bp | CTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTaGTGCCACAGCCTCTCAGGAATAAAACCCCACCTT | + |
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Preference number: 3 (lower is better) Translates to: LLLAKGWAASRS*CHSLSGIKPHL Trigger: AAGGTGGGGTTTTATTCCTGAGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | CAGGCTCAGGACATTAGAAAAGCACTGCTGCCCTACTaGGTTCCGGGATCACCACAGGTGTTGTGGTCGCAG | + |
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Preference number: 3 (lower is better) Translates to: QAQDIRKALLPY*VPGSPQVLWSQ Trigger: CTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAGTGCTTTTCTAATGTCCTGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | TCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTaGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTCA | + |
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Preference number: 3 (lower is better) Translates to: SSEICNLLLAKG*AASRSCCHSLS Trigger: TGAGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR TCA 72 bp | TGCAGGTTCTCACTACAGGACAAAGTGAGCCTCCCATaGGACTTGGTGTGCAGAGAAGAGCCAGGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: CRFSLQDKVSLP*DLVCREEPGAG Trigger: CCCAGCTCCTGGCTCTTCTCTGCACACCAAGTCTCATGGGAGGCTCACTTTGTCCTGTAGTGAGAACCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR TCA 72 bp | AAGGCCACTCCAAGGCAGTGGGGACACTGGACCCTGTaGTGGCATCAGATGGGAAGAGGGTTTCAAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: KATPRQWGHWTL*WHQMGRGFQSI Trigger: TATGCTTTGAAACCCTCTTCCCATCTGATGCCATCACAGGGTCCAGTGTCCCCACTGCCTTGGAGTGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 72 bp | GTTCCGTCTCACAGATCTCTCTGCCTCTGCCCTTCGTaGAAAGTCTGTCTAGACACCCAGGCTCAGGACATT | + |
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Preference number: 3 (lower is better) Translates to: VPSHRSLCLCPS*KVCLDTQAQDI Trigger: AATGTCCTGAGCCTGGGTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCAGAGAGATCTGTGAGACGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 72 bp | CCTTTTGTAATGTTAGGGCAGGTGCCTTGTGTGTGGTaGATGCTGGGTAGTATTCTCCCGCCAAGCGTCACC | + |
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Preference number: 3 (lower is better) Translates to: PFVMLGQVPCVW*MLGSILPPSVT Trigger: GGTGACGCTTGGCGGGAGAATACTACCCAGCATGCACCACACACAAGGCACCTGCCCTAACATTACAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | CACCCTTTTGTAATGTTAGGGCAGGTGCCTTGTGTGTaGTGCATGCTGGGTAGTATTCTCCCGCCAAGCGTC | + |
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Preference number: 3 (lower is better) Translates to: HPFVMLGQVPCV*CMLGSILPPSV Trigger: GACGCTTGGCGGGAGAATACTACCCAGCATGCACCACACACAAGGCACCTGCCCTAACATTACAAAAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR CAA 90 bp | GCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACTTTAAGGGTTTCCTTTaGCTACCAGGGGAGAACTGT | + |
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Preference number: 3 (lower is better) Translates to: ACWVVFSRQASPPVSSEDFKGFL*LPGENC Trigger: ACAGTTCTCCCCTGGTAGCAAAAGGAAACCCTTAAA...GTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | AGAGGGTTTCAAAGCATAAGACAAAGGGGGAAAGGCTaGGTCGTGGTCACAGGTGTTTGCCCGTTTTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: RGFQSIRQRGKG*VVVTGVCPFSV Trigger: GACTGAAAACGGGCAAACACCTGTGACCACGACCCAGCCTTTCCCCCTTTGTCTTATGCTTTGAAACCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR GCA 72 bp | ACATCTGGAGGTAAAGAATGTTTAAGGGTTTCCTTTTaGTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: TSGGKECLRVSF*YQGRTVSRKAF Trigger: GAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGAAACCCTTAAACATTCTTTACCTCCAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | TATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTaGGACACTGTAGGCTGTCTCAGAACAAAATCCAGT | + |
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Preference number: 3 (lower is better) Translates to: YEFPIQTKSAVR*DTVGCLRTKSS Trigger: ACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | TCTGTCAGAAAACTGTCAGAGTATCTTTCTAAACGCTaGATACCATCGTTTGGTGGCTGGTATGAGTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SVRKLSEYLSKR*IPSFGGWYEFP Trigger: TGGAAACTCATACCAGCCACCAAACGATGGTATCCAGCGTTTAGAAAGATACTCTGACAGTTTTCTGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR-3UTR CAA 90 bp | GTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATAAATATCGTGGTCACAGGTGTTaGCCCGTTTTCAGTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: VAIMTLNSSSQIGISHKYRGHRC*PVFSLL Trigger: TAAAAGACTGAAAACGGGCAAACACCTGTGACCACG...ATATTTATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CCA 72 bp | TATCTTTCTAAACGCTGGATACCATCGTTTGGTGGCTaGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: YLSKRWIPSFGG*YEFPIQTKSAV Trigger: CACTGCACTTTTTGTTTGAATTGGAAACTCATACCAGCCACCAAACGATGGTATCCAGCGTTTAGAAAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | TGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCATCCCGGGGGTGGGGTaGGATGTGGTGGCCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: CNLLLAKGWAASRSCCHSIPGVG*DVVAHQ Trigger: CTGGTGGGCCACCACATCCCACCCCACCCCCGGGAT...GCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | TGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCGCTCCTTGCGGATGGTaGTGGGCGGGTATCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: CNLLLAKGWAASRSCCHSAPCGW*WAGIPP Trigger: AGGCGGGATACCCGCCCATCACCATCCGCAAGGAGC...GCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCGGCCGCGAACTCGACTaGGTGCAGGTTCATGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: RSQDLQGTRVITVALSSVGRELD*VQVHGV Trigger: GACGCCATGAACCTGCACCCAGTCGAGTTCGCGGCC...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCGGGGACCACAGGCTGTaGCCTGTCCAGTTTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSQDLQGTRVITVALSSVGDHRL*PVQFAP Trigger: AGGAGCAAACTGGACAGGGCACAGCCTGTGGTCCCC...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| 3UTR CAA 72 bp | CTGCTGCCCTACTGGGTTCCGGGATCACCACAGGTGTaGTGGTCGCAGCACCACTCGGTCGCTGCTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLPYWVPGSPQV*WSQHHSVAASS Trigger: TGAGCTAGCAGCGACCGAGTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | CTGCTGCCCTACTGGGTTCCGGGATCACCACAGGTGTTGTGGTCGCAGCACCACCAGGGAGCGTCTCCTTaGACCCAGAATGGTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLPYWVPGSPQVLWSQHHQGASP*TQNGWA Trigger: AGCCCAACCATTCTGGGTTCAAGGAGACGCTCCCTG...GTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCCTGTGCATAGGCTGGTaGACTTGGGGACCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RSQDLQGTRVITVALSSVLCIGW*TWGPQA Trigger: AGCCTGTGGTCCCCAAGTGCACCAGCCTATGCACAG...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | CTGCTGCCCTACTGGGTTCCGGGATCACCACAGGTGTTGTGGTCGCAGCACCACGCGAACTCGACTGGGTaGAGGTTCATGGCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LLPYWVPGSPQVLWSQHHANSTG*RFMASS Trigger: AGAGGACGCCATGAACCTGCACCCAGTCGAGTTCGC...GTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | CTGCTGCCCTACTGGGTTCCGGGATCACCACAGGTGTTGTGGTCGCAGCACCACCCACCGAGTACTCGGTaGTGGCAAGGAGCAACGTGT | + |
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Preference number: 4 (lower is better) Translates to: LLPYWVPGSPQVLWSQHHPPSTR*WQGATC Trigger: ACACGTTGCTCCTTGCCACCACCGAGTACTCGGTGG...GTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTCCAGAATGGTTGGGCTaGGCTTCTGGCAGTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: TSYWQRAGLPVEAAATASPEWLG*ASGSAT Trigger: GGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGG...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | TGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCGCAGGTGGAAACCTCTaGGCACAGCCAGGCAATGCT | + |
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Preference number: 4 (lower is better) Translates to: CNLLLAKGWAASRSCCHSAGGNL*AQPGNA Trigger: AGCATTGCCTGGCTGTGCTCAGAGGTTTCCACCTGC...GCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAGCGACCCCAGAGCCATaGTCAGCAGCGCCATCCACA | + |
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Preference number: 4 (lower is better) Translates to: GSSEICNLLLAKGWAASRATPEP*SAAPST Trigger: TGTGGATGGCGCTGCTGAGCATGGCTCTGGGGTCGC...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTTCATGGCCGCGTGCATaGCGATCACCTCGTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSYWQRAGLPVEAAATASSWPRA*RSPRSA Trigger: AGCAGAACGAGGTGATCGGCATGCACGCGGCCATGA...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGATTCCAGGCTCTTCCCTaGCACGGCGTAGCGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSEICNLLLAKGWAASRFQALP*HGVAGL Trigger: GAGACCCGCTACGCCGTGCCAGGGAAGAGCCTGGAA...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTTCCCGTTGCCGTCGATaGAAGGGTGGATGTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: TSYWQRAGLPVEAAATASSRCRR*KGGCTP Trigger: TGGTGTACATCCACCCTTTCATCGACGGCAACGGGA...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCGGGCTTTCCCTCTCTTaGCTTGACGCTTCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQDLQGTRVITVALSSVGLSLS*LDASSP Trigger: TGGAGATGAAGCGTCAAGGCAAGAGAGGGAAAGCCC...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAGTTGGGCTGGGCTTCTaGCAGTGCCACCGAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSEICNLLLAKGWAASRVGLGF*QCHRVL Trigger: GAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAAC...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTTCCTTGAACCCAGAATaGTTGGGCTGGGCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSYWQRAGLPVEAAATASSLNPE*LGWASG Trigger: GCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAGGA...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCAGTAGTCAGCCTGGATaGTGTCCTTGTCTTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQDLQGTRVITVALSSVSSQPG*CPCLLR Trigger: CCGAAGAAGACAAGGACATCATCCAGGCTGACTACT...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGACGGAGACCCATTTaGGTTCGGCCACTGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSEICNLLLAKGWAASRRRRPI*VRPLPP Trigger: TGGTGGCAGTGGCCGAACCCAAATGGGTCTCCGTCT...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | ATGTTAGGGCAGGTGCCTTGTGTGTGGTGCATGCTGGGTAGTATTCTCCCGCCAATAGGCTGGTGCACTTaGGGACCACAGGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MLGQVPCVWCMLGSILPPIGWCT*GPQAVP Trigger: GGGCACAGCCTGTGGTCCCCAAGTGCACCAGCCTAT...TGGCGGGAGAATACTACCCAGCATGCACCACACACAAGGCACCTGCCCTAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | GGGTCTTCGGAAATCTGCAACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAGGGTGTTGCCCTCGATaGCCACCGTGTGGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSEICNLLLAKGWAASRGCCPR*PPCGRC Trigger: ACATCTACCACACGGTGGCCATCGAGGGCAACACCC...TCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGTTGCAGATTTCCGAAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | TCCGTCTCACAGATCTCTCTGCCTCTGCCCTTCGTGCAAAGTCTGTCTAGACACCGGGTCTCCAGGATGTaGCTGATCTCCGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSQISLPLPFVQSLSRHRVSRM*LISERV Trigger: CACCCTCTCGGAGATCAGGCACATCCTGGAGACCCG...GTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCAGAGAGATCTGTGAGACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAATCCACATCCCGGGGGTaGGGTGGGATGTGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQSTSRG*GGMWWP Trigger: GGGCCACCACATCCCACCCCACCCCCGGGATGTGGA...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | ATGTTAGGGCAGGTGCCTTGTGTGTGGTGCATGCTGGGTAGTATTCTCCCGCCAGCAACGTGTCCAGTGTaGCCTCCGTACACTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MLGQVPCVWCMLGSILPPATCPV*PPYTWL Trigger: TAGCCAAGTGTACGGAGGTCACACTGGACACGTTGC...TGGCGGGAGAATACTACCCAGCATGCACCACACACAAGGCACCTGCCCTAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | TCCGTCTCACAGATCTCTCTGCCTCTGCCCTTCGTGCAAAGTCTGTCTAGACACAGACCAGGGTGGTGTTaGTGTACTTCATGGCCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSQISLPLPFVQSLSRHRPGWC*CTSWPR Trigger: ACGCGGCCATGAAGTACATCAACACCACCCTGGTCT...GTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCAGAGAGATCTGTGAGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | TGCCTCTGCCCTTCGTGCAAAGTCTGTCTAGACACCCAGGCTCAGGACATTAGAGCCGAACTCATTCAGTaGGTCTACAAAGCCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCPSCKVCLDTQAQDIRAELIQ*VYKAGV Trigger: GACCCCGGCTTTGTAGACGCACTGAATGAGTTCGGC...TCTAATGTCCTGAGCCTGGGTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | TCCGTCTCACAGATCTCTCTGCCTCTGCCCTTCGTGCAAAGTCTGTCTAGACACTACTTCATGGCCGCGTaGATGCCGATCACCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVSQISLPLPFVQSLSRHYFMAA*MPITSF Trigger: GAACGAGGTGATCGGCATGCACGCGGCCATGAAGTA...GTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCAGAGAGATCTGTGAGACGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AAAAGTGCAGTGCGCTGGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACCTGGGCTTCTGGCAGTaGCACCGAGTACTCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSAVRWDTVGCLRTKSSDLGFWQ*HRVLGG Trigger: ACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAG...GTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAACCCTGGAGGAGACACTaGGCTCTGTGCATAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQPWRRH*ALCIGW Trigger: CCAGCCTATGCACAGAGCTCAGTGTCTCCTCCAGGG...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AAAAGTGCAGTGCGCTGGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACGTGAACTCCTGCATCTaGTTCTCCACATCCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSAVRWDTVGCLRTKSSDVNSCI*FSTSRG Trigger: CCCCCGGGATGTGGAGAAGCAGATGCAGGAGTTCAC...GTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATGACCCTGCGCAGCGCTaGGCTCCCCTTTGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDVAIMTLNSSSQIGISHDPAQR*APLWDG Trigger: TCCATCCCAAAGGGGAGCTCAGCGCTGCGCAGGGTC...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAAGACTGTCAGCAGCCCTaGATCCCTGGAGGAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQDCQQP*IPGGDT Trigger: AGTGTCTCCTCCAGGGATGCAGGGCTGCTGACAGTC...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | TGGGTCGTGGTCACAGGTGTTTGCCCGTTTTCAGTCTTTTATCAGAACTGCTTACCTGCCCGCCTCCACTaGATCCACATACCCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WVVVTGVCPFSVFYQNCLPARLH*IHIPQY Trigger: GTACTGGGGTATGTGGATCCAGTGGAGGCGGGCAGG...TAAGCAGTTCTGATAAAAGACTGAAAACGGGCAAACACCTGTGACCACGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATAGCCGGGGTCCATCTTaGGGGCGTGCAGGAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVAIMTLNSSSQIGISHSRGPS*GRAGRA Trigger: AGCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCT...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAATTCATCTCCAGGGCTTaGTTTAGGGCGGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQFISRA*FRAALA Trigger: AGCCAAGGCCGCCCTAAACCAAGCCCTGGAGATGAA...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | CCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAAGTGCAGGAAGAGCTTGTaGGCTTTCCCTCTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFATRGELFLERPSLDAKCRKSL*AFPLLP Trigger: AGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCA...CTTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | TGGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTGGGACACTGTAGGCCCCAGTACCCTCCTGTaGATCTCCAGCATGTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WYEFPIQTKSAVRWDTVGPSTLL*ISSMSS Trigger: GGACGACATGCTGGAGATCCACAGGAGGGTACTGGG...GCCTACAGTGTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | TGGTATGAGTTTCCAATTCAAACAAAAAGTGCAGTGCGCTGGGACACTGTAGGCAGCACAGCCAGGCAATaGTCTTCCACAACTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WYEFPIQTKSAVRWDTVGSTARQ*SSTTPS Trigger: GCTGGGAGTTGTGGAAGAGCATTGCCTGGCTGTGCT...GCCTACAGTGTCCCAGCGCACTGCACTTTTTGTTTGAATTGGAAACTCATACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CCA 90 bp | GTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATAAATATTGGCCCACCAGGACCTaGGTCCTCCGGAACCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VAIMTLNSSSQIGISHKYWPTRT*VLRNLP Trigger: GGGCAGGTTCCGGAGGACCCAGGTCCTGGTGGGCCA...ATATTTATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATCCGATCACCTCGTTCTaGTCTTCCAGGCTCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDVAIMTLNSSSQIGISHPITSF*SSRLFP Trigger: AGGGAAGAGCCTGGAAGAGCAGAACGAGGTGATCGG...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR GCA 90 bp | GTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATAAATATTCCATCTTGAGGGCGTaGAGGAAGAGCTTGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAIMTLNSSSQIGISHKYSILRA*RKSLWA Trigger: AGCCCACAAGCTCTTCCTGCACGCCCTCAAGATGGA...ATATTTATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR TCA 90 bp | GTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATAAATATCCTTTGGGATGGACATaGCCTTCTTCACTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAIMTLNSSSQIGISHKYPLGWT*PSSLCC Trigger: ACAGCAAAGTGAAGAAGGTCATGTCCATCCCAAAGG...ATATTTATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | CTGCTGCCCTACTGGGTTCCGGGATCACCACAGGTGTTGTGGTCGCAGCACCACTCGGACCTCTGCTCCTaGCGGATGGTGATGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPYWVPGSPQVLWSQHHSDLCS*RMVMGG Trigger: CCCGCCCATCACCATCCGCAAGGAGCAGAGGTCCGA...GTGGTGCTGCGACCACAACACCTGTGGTGATCCCGGAACCCAGTAGGGCAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | ACCTCTGGTCGATTTCCTCCACGAGGGGCAGTGTCCGATCCCGGTTaGCCAGGGCTTTCTCGTGGAAGGGCGAGATGGTCAGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSGRFPPRGAVSDPG*PGLSRGRARWSGPW Trigger: CCAGGGCCCTGACCATCTCGCCCTTCCACGAGAAAGCCCTGGTCAACCGGGATCGGACACTGCCCCTCGTGGAGGAAATCGACCAGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 90 bp | CGCGTGCATGCCGATCACCTCGTTCTGCTCTTCCAGGCTCTTCCCTaGCACGGCGTAGCGGGTCTCCAGGATGTGCCTGATCTCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVHADHLVLLFQALP*HGVAGLQDVPDLRE Trigger: CTCTCGGAGATCAGGCACATCCTGGAGACCCGCTACGCCGTGCCAGGGAAGAGCCTGGAAGAGCAGAACGAGGTGATCGGCATGCACGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | AGGTCTCAGGACCTCCAAGGCACCCGAGTGATCACCGTGGCCCTGAGTTCCGTCCATAGGCTGGTGCACTaGGGGACCACAGGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSQDLQGTRVITVALSSVHRLVH*GTTGCA Trigger: GGCACAGCCTGTGGTCCCCAAGTGCACCAGCCTATG...GACGGAACTCAGGGCCACGGTGATCACTCGGGTGCCTTGGAGGTCCTGAGACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | CCGATGCGGGAGACCAGGGTGGTGTTGATGTACTTCATGGCCGCGTaGATGCCGATCACCTCGTTCTGCTCTTCCAGGCTCTTCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PMRETRVVLMYFMAA*MPITSFCSSRLFPG Trigger: GCCAGGGAAGAGCCTGGAAGAGCAGAACGAGGTGATCGGCATGCACGCGGCCATGAAGTACATCAACACCACCCTGGTCTCCCGCATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 90 bp | AACCTGCCCGCCTCCACTGGATCCACATACCCCAGTACCCTCCTGTaGATCTCCAGCATGTCGTCCATGGTGACAGACCCGATGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLPASTGSTYPSTLL*ISSMSSMVTDPMRE Trigger: CTCCCGCATCGGGTCTGTCACCATGGACGACATGCTGGAGATCCACAGGAGGGTACTGGGGTATGTGGATCCAGTGGAGGCGGGCAGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 90 bp | CACAGGGAGCGTCTCCTTGAACCCAGAATGGTTGGGCTGGGCTTCTaGCAGTGCCACCGAGTACTCGGTGGTGGCAAGGAGCAACGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HRERLLEPRMVGLGF*QCHRVLGGGKEQRV Trigger: GACACGTTGCTCCTTGCCACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAGGAGACGCTCCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | GCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACAAGCCGGGGTCCATCTaGAGGGCGTGCAGGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACWVVFSRQASPPVSSEDKPGSI*RACRKS Trigger: GCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTT...GTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | AGTTTGCTCCTGAGCAGGTGGAAACCTCTGAGCACAGCCAGGCAATaGTCTTCCACAACTCCCAGCGGCAGCAGCAGAGCCAGCAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSRWKPLSTARQ*SSTTPSGSSRASSD Trigger: GTCGCTGCTGGCTCTGCTGCTGCCGCTGGGAGTTGTGGAAGAGCATTGCCTGGCTGTGCTCAGAGGTTTCCACCTGCTCAGGAGCAAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | TCGGACCTCTGCTCCTTGCGGATGGTGATGGGCGGGTATCCCGCCTaGATCAAAATCAGGTTCATCAGCAGACGGGAGGTCCTCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLCSLRMVMGGYPA*IKIRFISRREVLPL Trigger: CAACGGGAGGACCTCCCGTCTGCTGATGAACCTGATTTTGATGCAGGCGGGATACCCGCCCATCACCATCCGCAAGGAGCAGAGGTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | GAGCGTCTCCTTGAACCCAGAATGGTTGGGCTGGGCTTCTGGCAGTaGCACCGAGTACTCGGTGGTGGCAAGGAGCAACGTGTCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERLLEPRMVGLGFWQ*HRVLGGGKEQRVQC Trigger: ACACTGGACACGTTGCTCCTTGCCACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAGGAGACGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | TTGAGGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCTCTCTTGCCTTaGCGCTTCATCTCCAGGGCTTGGTTTAGGGCGGCCTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRACRKSLWAFPLLP*RFISRAWFRAALAS Trigger: GGAAGCCAAGGCCGCCCTAAACCAAGCCCTGGAGATGAAGCGTCAAGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCACGCCCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | GGCCAGGGCCGCGAACTCGACTGGGTGCAGGTTCATGGCGTCCTCTaGATTGAGCCACTGTGTGAACTCCTGCATCTGCTTCTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: GQGRELDWVQVHGVL*IEPLCELLHLLLHI Trigger: GATGTGGAGAAGCAGATGCAGGAGTTCACACAGTGGCTCAATTCAGAGGACGCCATGAACCTGCACCCAGTCGAGTTCGCGGCCCTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | TGCAGGTTCATGGCGTCCTCTGAATTGAGCCACTGTGTGAACTCCTaGATCTGCTTCTCCACATCCCGGGGGTGGGGTGGGATGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CRFMASSELSHCVNS*ICFSTSRGWGGMWW Trigger: CCACCACATCCCACCCCACCCCCGGGATGTGGAGAAGCAGATGCAGGAGTTCACACAGTGGCTCAATTCAGAGGACGCCATGAACCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | GCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACGAGACCAGGGTGGTGTaGATGTACTTCATGGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ACWVVFSRQASPPVSSEDETRVV*MYFMAA Trigger: CGCGGCCATGAAGTACATCAACACCACCCTGGTCTC...GTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | ACCTCCTACTGGCAAAGGGCTGGGCTGCCAGTAGAAGCTGCTGCCACAGCCTCTATGGCGTCCTCTGAATaGAGCCACTGTGTGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: TSYWQRAGLPVEAAATASMASSE*SHCVNS Trigger: GGAGTTCACACAGTGGCTCAATTCAGAGGACGCCAT...AGAGGCTGTGGCAGCAGCTTCTACTGGCAGCCCAGCCCTTTGCCAGTAGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | AAATCAGGTTCATCAGCAGACGGGAGGTCCTCCCGTTGCCGTCGATaGAAGGGTGGATGTACACCAGTTTGTAATGGGCCAGGGCCGCGA | + |
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Preference number: 5 (lower is better) Translates to: KSGSSADGRSSRCRR*KGGCTPVCNGPGPR Trigger: TCGCGGCCCTGGCCCATTACAAACTGGTGTACATCCACCCTTTCATCGACGGCAACGGGAGGACCTCCCGTCTGCTGATGAACCTGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | AAAAGTGCAGTGCGCTGGGACACTGTAGGCTGTCTCAGAACAAAATCCAGTGACCGGGAGGTCCTCCCGTaGCCGTCGATGAAAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: KSAVRWDTVGCLRTKSSDREVLP*PSMKGW Trigger: CCACCCTTTCATCGACGGCAACGGGAGGACCTCCCG...GTCACTGGATTTTGTTCTGAGACAGCCTACAGTGTCCCAGCGCACTGCACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | AGATGCCGAACTCATTCAGTGCGTCTACAAAGCCGGGGTCCATCTTaGGGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCTCTCTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: RCRTHSVRLQSRGPS*GRAGRACGLSLSCL Trigger: AAGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGTTCGGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 90 bp | GTAGATGTGGTGGTAGTAGGTCTCCTCCATGACCCTGCGCAGCGCTaGGCTCCCCTTTGGGATGGACATGACCTTCTTCACTTTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VDVVVVGLLHDPAQR*APLWDGHDLLHFAV Trigger: GACAGCAAAGTGAAGAAGGTCATGTCCATCCCAAAGGGGAGCTCAGCGCTGCGCAGGGTCATGGAGGAGACCTACTACCACCACATCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 90 bp | GACATGACCTTCTTCACTTTGCTGTCGATGACGCTGAAGTACCTCTaGTCGATTTCCTCCACGAGGGGCAGTGTCCGATCCCGGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: DMTFFTLLSMTLKYL*SISSTRGSVRSRLT Trigger: GGTCAACCGGGATCGGACACTGCCCCTCGTGGAGGAAATCGACCAGAGGTACTTCAGCGTCATCGACAGCAAAGTGAAGAAGGTCATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | GCATGCTGGGTAGTATTCTCCCGCCAAGCGTCACCTCCCGTGTCCTCAGAAGACGCCTGGATGATGTCCTaGTCTTCTTCGGAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ACWVVFSRQASPPVSSEDAWMMS*SSSEKM Trigger: CATCTTCTCCGAAGAAGACAAGGACATCATCCAGGC...GTCTTCTGAGGACACGGGAGGTGACGCTTGGCGGGAGAATACTACCCAGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAACAGACGGAGACCCATTaGGGTTCGGCCACTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQQTETH*GSATAT Trigger: GGTGGCAGTGGCCGAACCCAAATGGGTCTCCGTCTG...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 90 bp | GATGATGTCCTTGTCTTCTTCGGAGAAGATGCCGAACTCATTCAGTaGGTCTACAAAGCCGGGGTCCATCTTGAGGGCGTGCAGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: DDVLVFFGEDAELIQ*VYKAGVHLEGVQEE Trigger: CTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGTTCGGCATCTTCTCCGAAGAAGACAAGGACATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | TCCTTTTGCTACCAGGGGAGAACTGTTTCTAGAAAGGCCTTCTCTGGATGCCAATGGTTTAGGGCGGCCTaGGCTTCCAGCTTCCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SFCYQGRTVSRKAFSGCQWFRAA*ASSFPA Trigger: AGCAGGGAAGCTGGAAGCCAAGGCCGCCCTAAACCA...TTGGCATCCAGAGAAGGCCTTTCTAGAAACAGTTCTCCCCTGGTAGCAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | TGGGTCGTGGTCACAGGTGTTTGCCCGTTTTCAGTCTTTTATCAGAACTGCTTAAGTGTCCGATCCCGGTaGACCAGGGCTTTCTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: WVVVTGVCPFSVFYQNCLSVRSR*TRAFSW Trigger: CCACGAGAAAGCCCTGGTCAACCGGGATCGGACACT...TAAGCAGTTCTGATAAAAGACTGAAAACGGGCAAACACCTGTGACCACGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | TGCCTCTGCCCTTCGTGCAAAGTCTGTCTAGACACCCAGGCTCAGGACATTAGAATGACCTTCTTCACTTaGCTGTCGATGACGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CLCPSCKVCLDTQAQDIRMTFFT*LSMTLK Trigger: CTTCAGCGTCATCGACAGCAAAGTGAAGAAGGTCAT...TCTAATGTCCTGAGCCTGGGTGTCTAGACAGACTTTGCACGAAGGGCAGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATTGTGCCCTGTCCAGTTaGCTCCTGAGCAGGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SDVAIMTLNSSSQIGISHCALSS*LLSRWK Trigger: TTTCCACCTGCTCAGGAGCAAACTGGACAGGGCACA...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS-3UTR CAA 90 bp | AGTGACGTAGCCATTATGACTCTAAATAGCAGCAGTCAAATCGGCATTAGCCATTTTCCCTCTCTTGCCTaGACGCTTCATCTCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SDVAIMTLNSSSQIGISHFPSLA*TLHLQG Trigger: GCCCTGGAGATGAAGCGTCAAGGCAAGAGAGGGAAA...ATGGCTAATGCCGATTTGACTGCTGCTATTTAGAGTCATAATGGCTACGTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | GTGAACTCCTGCATCTGCTTCTCCACATCCCGGGGGTaGGGTGGGATGTGGTGGCCCACCAGGACCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VNSCICFSTSRG*GGMWWPTRTWV Trigger: GACCCAGGTCCTGGTGGGCCACCACATCCCACCCCACCCCCGGGATGTGGAGAAGCAGATGCAGGAGTTCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | GCCATCCACAGGAAACGGCCCCAGACGGAGACCCATTaGGGTTCGGCCACTGCCACCACCGACGCCATTGGC | + |
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Preference number: 6 (lower is better) Translates to: AIHRKRPQTETH*GSATATTDAIG Trigger: GCCAATGGCGTCGGTGGTGGCAGTGGCCGAACCCAAATGGGTCTCCGTCTGGGGCCGTTTCCTGTGGATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | CCATCCACAGGAAACGGCCCCAGACGGAGACCCATTTaGGTTCGGCCACTGCCACCACCGACGCCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSTGNGPRRRPI*VRPLPPPTPLA Trigger: TGCCAATGGCGTCGGTGGTGGCAGTGGCCGAACCCAAATGGGTCTCCGTCTGGGGCCGTTTCCTGTGGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 90 bp | TACCTCTGGTCGATTTCCTCCACGAGGGGCAGTGTCCGATCCCGGTaGACCAGGGCTTTCTCGTGGAAGGGCGAGATGGTCAGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: YLWSISSTRGSVRSR*TRAFSWKGEMVRAL Trigger: CAGGGCCCTGACCATCTCGCCCTTCCACGAGAAAGCCCTGGTCAACCGGGATCGGACACTGCCCCTCGTGGAGGAAATCGACCAGAGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | GCCGATCACCTCGTTCTGCTCTTCCAGGCTCTTCCCTaGCACGGCGTAGCGGGTCTCCAGGATGTGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ADHLVLLFQALP*HGVAGLQDVPD Trigger: ATCAGGCACATCCTGGAGACCCGCTACGCCGTGCCAGGGAAGAGCCTGGAAGAGCAGAACGAGGTGATCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | CGATTTCCTCCACGAGGGGCAGTGTCCGATCCCGGTTaGCCAGGGCTTTCTCGTGGAAGGGCGAGATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RFPPRGAVSDPG*PGLSRGRARWS Trigger: TGACCATCTCGCCCTTCCACGAGAAAGCCCTGGTCAACCGGGATCGGACACTGCCCCTCGTGGAGGAAATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | CGTCTCCTTGAACCCAGAATGGTTGGGCTGGGCTTCTaGCAGTGCCACCGAGTACTCGGTGGTGGCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RLLEPRMVGLGF*QCHRVLGGGKE Trigger: CTCCTTGCCACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAGGAGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | ACAGGGAGCGTCTCCTTGAACCCAGAATGGTTGGGCTaGGCTTCTGGCAGTGCCACCGAGTACTCGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TGSVSLNPEWLG*ASGSATEYSVV Trigger: CACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAGGAGACGCTCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | TCGATTTCCTCCACGAGGGGCAGTGTCCGATCCCGGTaGACCAGGGCTTTCTCGTGGAAGGGCGAGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SISSTRGSVRSR*TRAFSWKGEMV Trigger: GACCATCTCGCCCTTCCACGAGAAAGCCCTGGTCAACCGGGATCGGACACTGCCCCTCGTGGAGGAAATCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 72 bp | CTTGAACCCAGAATGGTTGGGCTGGGCTTCTGGCAGTaGCACCGAGTACTCGGTGGTGGCAAGGAGCAACGT | + |
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Preference number: 6 (lower is better) Translates to: LEPRMVGLGFWQ*HRVLGGGKEQR Trigger: ACGTTGCTCCTTGCCACCACCGAGTACTCGGTGGCACTGCCAGAAGCCCAGCCCAACCATTCTGGGTTCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | ATGGTGACAGACCCGATGCGGGAGACCAGGGTGGTGTaGATGTACTTCATGGCCGCGTGCATGCCGATCACC | + |
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Preference number: 6 (lower is better) Translates to: MVTDPMRETRVV*MYFMAACMPIT Trigger: GGTGATCGGCATGCACGCGGCCATGAAGTACATCAACACCACCCTGGTCTCCCGCATCGGGTCTGTCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 90 bp | ATGTCGTCCATGGTGACAGACCCGATGCGGGAGACCAGGGTGGTGTaGATGTACTTCATGGCCGCGTGCATGCCGATCACCTCGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: MSSMVTDPMRETRVV*MYFMAACMPITSFC Trigger: GCAGAACGAGGTGATCGGCATGCACGCGGCCATGAAGTACATCAACACCACCCTGGTCTCCCGCATCGGGTCTGTCACCATGGACGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | TGCAGGAAGAGCTTGTGGGCTTTCCCTCTCTTGCCTTaGCGCTTCATCTCCAGGGCTTGGTTTAGGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: CRKSLWAFPLLP*RFISRAWFRAA Trigger: GGCCGCCCTAAACCAAGCCCTGGAGATGAAGCGTCAAGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | GTGGTAGTAGGTCTCCTCCATGACCCTGCGCAGCGCTaGGCTCCCCTTTGGGATGGACATGACCTTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: VVVGLLHDPAQR*APLWDGHDLLH Trigger: GTGAAGAAGGTCATGTCCATCCCAAAGGGGAGCTCAGCGCTGCGCAGGGTCATGGAGGAGACCTACTACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 72 bp | GGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCTCTCTTaGCTTGACGCTTCATCTCCAGGGCTTGGTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRAGRACGLSLS*LDASSPGLGLG Trigger: CCCTAAACCAAGCCCTGGAGATGAAGCGTCAAGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCACGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 72 bp | GAGACCAGGGTGGTGTTGATGTACTTCATGGCCGCGTaGATGCCGATCACCTCGTTCTGCTCTTCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ETRVVLMYFMAA*MPITSFCSSRL Trigger: GAGCCTGGAAGAGCAGAACGAGGTGATCGGCATGCACGCGGCCATGAAGTACATCAACACCACCCTGGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 72 bp | TGCTCCTTGCGGATGGTGATGGGCGGGTATCCCGCCTaGATCAAAATCAGGTTCATCAGCAGACGGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CSLRMVMGGYPA*IKIRFISRREV Trigger: GACCTCCCGTCTGCTGATGAACCTGATTTTGATGCAGGCGGGATACCCGCCCATCACCATCCGCAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | ACTCATTCAGTGCGTCTACAAAGCCGGGGTCCATCTTaGGGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: THSVRLQSRGPS*GRAGRACGLSL Trigger: GAGGGAAAGCCCACAAGCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | CATGGTAGTACTCGGACCTCTGCTCCTTGCGGATGGTaGTGGGCGGGTATCCCGCCTGCATCAAAATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HGSTRTSAPCGW*WAGIPPASKSG Trigger: ACCTGATTTTGATGCAGGCGGGATACCCGCCCATCACCATCCGCAAGGAGCAGAGGTCCGAGTACTACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 90 bp | AAGATGCCGAACTCATTCAGTGCGTCTACAAAGCCGGGGTCCATCTaGAGGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCTCTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KMPNSFSASTKPGSI*RACRKSLWAFPLLP Trigger: AGGCAAGAGAGGGAAAGCCCACAAGCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGTTCGGCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 90 bp | CGCAGCGCTGAGCTCCCCTTTGGGATGGACATGACCTTCTTCACTTaGCTGTCGATGACGCTGAAGTACCTCTGGTCGATTTCCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: RSAELPFGMDMTFFT*LSMTLKYLWSISST Trigger: CGTGGAGGAAATCGACCAGAGGTACTTCAGCGTCATCGACAGCAAAGTGAAGAAGGTCATGTCCATCCCAAAGGGGAGCTCAGCGCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | CGCGAACTCGACTGGGTGCAGGTTCATGGCGTCCTCTaGATTGAGCCACTGTGTGAACTCCTGCATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RELDWVQVHGVL*IEPLCELLHLL Trigger: AAGCAGATGCAGGAGTTCACACAGTGGCTCAATTCAGAGGACGCCATGAACCTGCACCCAGTCGAGTTCGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS TCA 72 bp | TCATCAGCAGACGGGAGGTCCTCCCGTTGCCGTCGATaGAAGGGTGGATGTACACCAGTTTGTAATGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSADGRSSRCRR*KGGCTPVCNGP Trigger: TGGCCCATTACAAACTGGTGTACATCCACCCTTTCATCGACGGCAACGGGAGGACCTCCCGTCTGCTGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | AACTCATTCAGTGCGTCTACAAAGCCGGGGTCCATCTaGAGGGCGTGCAGGAAGAGCTTGTGGGCTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NSFSASTKPGSI*RACRKSLWAFP Trigger: AGGGAAAGCCCACAAGCTCTTCCTGCACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS GCA 72 bp | CTTGTCTTCTTCGGAGAAGATGCCGAACTCATTCAGTaGGTCTACAAAGCCGGGGTCCATCTTGAGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LVFFGEDAELIQ*VYKAGVHLEGV Trigger: CACGCCCTCAAGATGGACCCCGGCTTTGTAGACGCACTGAATGAGTTCGGCATCTTCTCCGAAGAAGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CCA 72 bp | TTCTTCACTTTGCTGTCGATGACGCTGAAGTACCTCTaGTCGATTTCCTCCACGAGGGGCAGTGTCCGATCC | + |
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Preference number: 6 (lower is better) Translates to: FFTLLSMTLKYL*SISSTRGSVRS Trigger: GGATCGGACACTGCCCCTCGTGGAGGAAATCGACCAGAGGTACTTCAGCGTCATCGACAGCAAAGTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | AAAATCAGGTTCATCAGCAGACGGGAGGTCCTCCCGTaGCCGTCGATGAAAGGGTGGATGTACACCAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KIRFISRREVLP*PSMKGWMYTSL Trigger: CAAACTGGTGTACATCCACCCTTTCATCGACGGCAACGGGAGGACCTCCCGTCTGCTGATGAACCTGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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| CDS CAA 72 bp | GAGCTCCCCTTTGGGATGGACATGACCTTCTTCACTTaGCTGTCGATGACGCTGAAGTACCTCTGGTCGATT | + |
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Preference number: 6 (lower is better) Translates to: ELPFGMDMTFFT*LSMTLKYLWSI Trigger: AATCGACCAGAGGTACTTCAGCGTCATCGACAGCAAAGTGAAGAAGGTCATGTCCATCCCAAAGGGGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065698.7 |
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