Pregenerated sensors for FIBIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074971Ensembl transcript IDs: ENSMUST00000099626.5
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACTTCCTTGTCTGGCAGGCATGCCACACACCTGGGACCTCATCTaGAAATCAGGCATCTCAGCCTTCAGAGACCAAAGAGAAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: ELPCLAGMPHTWDLI*KSGISAFRDQREAC Trigger: GCAGGCTTCTCTTTGGTCTCTGAAGGCTGAGATGCCTGATTTTCAGATGAGGTCCCAGGTGTGTGGCATGCCTGCCAGACAAGGAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR CCA 90 bp | CCTGCTGATGCAAAGGAGCCACGCACCTCGTCCCCCGCCAGGATGTaGAAGTTTAATCAGTCTTTCCACACAAATGCATCCTTTAGATGG | + |
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Preference number: 1 (lower is better) Translates to: PADAKEPRTSSPARM*KFNQSFHTNASFRW Trigger: CCATCTAAAGGATGCATTTGTGTGGAAAGACTGATTAAACTTCCACATCCTGGCGGGGGACGAGGTGCGTGGCTCCTTTGCATCAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 90 bp | CTTGTACAGGCTAGATCCCACTACCCCTTACTAGGATGGTGTATGTaGGCAGACAGGGTAAGATACTCAAAAATACAGCACCTTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LVQARSHYPLLGWCM*ADRVRYSKIQHLLP Trigger: AGGGAGAAGGTGCTGTATTTTTGAGTATCTTACCCTGTCTGCTCACATACACCATCCTAGTAAGGGGTAGTGGGATCTAGCCTGTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 90 bp | CATAGACACTTGAGTGTTAAGCAATCTGTTTCTTTGATGGTGAAGTaGAAGACACATCATGAGTGGGCAACCACCCTAAAGTTTTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: HRHLSVKQSVSLMVK*KTHHEWATTLKFCY Trigger: ATAGCAAAACTTTAGGGTGGTTGCCCACTCATGATGTGTCTTTCACTTCACCATCAAAGAAACAGATTGCTTAACACTCAAGTGTCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 90 bp | AGCATAGAAATAGCTTTCAAATTGTTAGGCATCACTAACACAGAATaGGTGCATAGGAGATATGGACCTTTGTCACACATTTCCAATGGA | + |
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Preference number: 1 (lower is better) Translates to: SIEIAFKLLGITNTE*VHRRYGPLSHISNG Trigger: TCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTATGCACTCATTCTGTGTTAGTGATGCCTAACAATTTGAAAGCTATTTCTATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR GCA 90 bp | ACACAAACCCACAATGGAACTTTGAACATCTTACTGGTGGTGATTTaGATGCAAATTCTCAATAACACTCTTACAACAAAACAGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: TQTHNGTLNILLVVI*MQILNNTLTTKQKQ Trigger: TTGTTTCTGTTTTGTTGTAAGAGTGTTATTGAGAATTTGCATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR-3UTR TCA 90 bp | CTAACACAGAATGAGTGCATAGGAGATATGGACCTTTGTCACACATTTCCAATGCGAAAGGAGAATCAATaGACTTCCTTGTCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LTQNECIGDMDLCHTFPMRKENQ*TSLSGR Trigger: CCTGCCAGACAAGGAAGTTCATTGATTCTCCTTTCG...CATTGGAAATGTGTGACAAAGGTCCATATCTCCTATGCACTCATTCTGTGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR-3UTR TCA 90 bp | CTAACACAGAATGAGTGCATAGGAGATATGGACCTTTGTCACACATTTCCAATGCTAGGATGGTGTATGTaGGCAGACAGGGTAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: LTQNECIGDMDLCHTFPMLGWCM*ADRVRY Trigger: GTATCTTACCCTGTCTGCTCACATACACCATCCTAG...CATTGGAAATGTGTGACAAAGGTCCATATCTCCTATGCACTCATTCTGTGTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR-3UTR CCA 90 bp | AAATGTATAATTCTTGTACAGGCTAGATCCCACTACCCCTTACTAGGATGGTGTTCCCCCGCCAGGATGTaGAAGTTTAATCAGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KCIILVQARSHYPLLGWCSPARM*KFNQSF Trigger: GAAAGACTGATTAAACTTCCACATCCTGGCGGGGGA...ACACCATCCTAGTAAGGGGTAGTGGGATCTAGCCTGTACAAGAATTATACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAGATATGGACCTTTGTCACACATTTCCAATGGAGTCTATGAAAAATGAGTATACTCTGATAAACTaGCTTCAATCCTATCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: IGDMDLCHTFPMESMKNEYTLIN*LQSYLP Trigger: GGGGAGATAGGATTGAAGCCAGTTTATCAGAGTATA...CTCATTTTTCATAGACTCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAGATATGGACCTTTGTCACACATTTCCAATGGAGTCTATGAAAAATGAGTTACTGGTGGTGATTTaGATGCAAATTCTCAATAAC | + |
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Preference number: 2 (lower is better) Translates to: IGDMDLCHTFPMESMKNELLVVI*MQILNN Trigger: GTTATTGAGAATTTGCATGCAAATCACCACCAGTAA...CTCATTTTTCATAGACTCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 72 bp | GGCATCTCAGCCTTCAGAGACCAAAGAGAAGCCTGCTaGTGCAAAGGAGCCACGCACCTCGTCCCCCGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GISAFRDQREAC*CKGATHLVPRQ Trigger: CTGGCGGGGGACGAGGTGCGTGGCTCCTTTGCATCAGCAGGCTTCTCTTTGGTCTCTGAAGGCTGAGATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR CCA 72 bp | GCAAAGGAGCCACGCACCTCGTCCCCCGCCAGGATGTaGAAGTTTAATCAGTCTTTCCACACAAATGCATCC | + |
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Preference number: 3 (lower is better) Translates to: AKEPRTSSPARM*KFNQSFHTNAS Trigger: GGATGCATTTGTGTGGAAAGACTGATTAAACTTCCACATCCTGGCGGGGGACGAGGTGCGTGGCTCCTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 72 bp | TGTCTGGCAGGCATGCCACACACCTGGGACCTCATCTaGAAATCAGGCATCTCAGCCTTCAGAGACCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CLAGMPHTWDLI*KSGISAFRDQR Trigger: TCTTTGGTCTCTGAAGGCTGAGATGCCTGATTTTCAGATGAGGTCCCAGGTGTGTGGCATGCCTGCCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 72 bp | GCTAGATCCCACTACCCCTTACTAGGATGGTGTATGTaGGCAGACAGGGTAAGATACTCAAAAATACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: ARSHYPLLGWCM*ADRVRYSKIQH Trigger: GTGCTGTATTTTTGAGTATCTTACCCTGTCTGCTCACATACACCATCCTAGTAAGGGGTAGTGGGATCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 72 bp | TTGAGTGTTAAGCAATCTGTTTCTTTGATGGTGAAGTaGAAGACACATCATGAGTGGGCAACCACCCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: LSVKQSVSLMVK*KTHHEWATTLK Trigger: CTTTAGGGTGGTTGCCCACTCATGATGTGTCTTTCACTTCACCATCAAAGAAACAGATTGCTTAACACTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR TCA 72 bp | ATAGCTTTCAAATTGTTAGGCATCACTAACACAGAATaGGTGCATAGGAGATATGGACCTTTGTCACACATT | + |
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Preference number: 3 (lower is better) Translates to: IAFKLLGITNTE*VHRRYGPLSHI Trigger: AATGTGTGACAAAGGTCCATATCTCCTATGCACTCATTCTGTGTTAGTGATGCCTAACAATTTGAAAGCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR CCA 72 bp | TTAAATGTTGCATCTTCAACTTACACAAACCCACAATaGAACTTTGAACATCTTACTGGTGGTGATTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LNVASSTYTNPQ*NFEHLTGGDLH Trigger: ATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGTGTAAGTTGAAGATGCAACATTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR GCA 72 bp | CACAATGGAACTTTGAACATCTTACTGGTGGTGATTTaGATGCAAATTCTCAATAACACTCTTACAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: HNGTLNILLVVI*MQILNNTLTTK Trigger: TTTTGTTGTAAGAGTGTTATTGAGAATTTGCATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | GCGAAAGGAGAATCAATGAACTTCCTTGTCTGGCAGGCATGCCACACACCTGGGTGGCCCCCTTCCCCCTaGGAGCAGCGCCTGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: AKGESMNFLVWQACHTPGWPPSP*EQRLRS Trigger: TGATCGCAGGCGCTGCTCCCAGGGGGAAGGGGGCCA...CCCAGGTGTGTGGCATGCCTGCCAGACAAGGAAGTTCATTGATTCTCCTTTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | CTGCTGATGCAAAGGAGCCACGCACCTCGTCCCCCGCCAGGATGTGGAAGTTTAACCCTGAAGAGCAGCTaGCATTTCTCGGGGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LLMQRSHAPRPPPGCGSLTLKSS*HFSGSS Trigger: TGATGACCCCGAGAAATGCCAGCTGCTCTTCAGGGT...TAAACTTCCACATCCTGGCGGGGGACGAGGTGCGTGGCTCCTTTGCATCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | TCTGATAAACTGGCTTCAATCCTATCTCCCCTCTCCTTTGCACTAGTCCCTCTCCCAGCATCCTCCACCTaGCGGCCCAGTACTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SDKLASILSPLSFALVPLPASST*RPSTVN Trigger: GTTCACAGTACTGGGCCGCCAGGTGGAGGATGCTGG...GAGAGGGACTAGTGCAAAGGAGAGGGGAGATAGGATTGAAGCCAGTTTATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR TCA 90 bp | CTGGGACCTCATCTGAAAATCAGGCATCTCAGCCTTCAGAGACCAAAGAGAAGCTGCGATCACTCACCCTaGAGAGCAGCTGGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGPHLKIRHLSLQRPKRSCDHSP*RAAGIS Trigger: AGAAATGCCAGCTGCTCTTCAGGGTGAGTGATCGCA...GCTTCTCTTTGGTCTCTGAAGGCTGAGATGCCTGATTTTCAGATGAGGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR TCA 90 bp | AAAATCAGGCATCTCAGCCTTCAGAGACCAAAGAGAAGCCTGCTGATGCAAAGGGCTCTTGGCCCTGCTTaGACTTGCTTTCCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KIRHLSLQRPKRSLLMQRALGPA*TCFPAQ Trigger: CTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGC...CCTTTGCATCAGCAGGCTTCTCTTTGGTCTCTGAAGGCTGAGATGCCTGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR GCA 90 bp | CTGGGACCTCATCTGAAAATCAGGCATCTCAGCCTTCAGAGACCAAAGAGAAGCTCCTGCTCTTGGCCCTaGTTGAACTTGCTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LGPHLKIRHLSLQRPKRSSCSWP*LNLLSS Trigger: GCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGA...GCTTCTCTTTGGTCTCTGAAGGCTGAGATGCCTGATTTTCAGATGAGGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | CCTCGTCCCCCGCCAGGATGTGGAAGTTTAATCAGTCTTTCCACACAAATGCATCGGCTATCCTGCTCTTaGCCCTGCTTGAACTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PRPPPGCGSLISLSTQMHRLSCS*PCLNLL Trigger: AAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCG...ATGCATTTGTGTGGAAAGACTGATTAAACTTCCACATCCTGGCGGGGGACGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR TCA 90 bp | AATGAGTGCATAGGAGATATGGACCTTTGTCACACATTTCCAATGGAGTCTATGAGGAGATGCTCTTGCTaGTGCCCTCCAGGACGCGTC | + |
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Preference number: 4 (lower is better) Translates to: NECIGDMDLCHTFPMESMRRCSC*CPPGRV Trigger: GACGCGTCCTGGAGGGCATCAGCAAGAGCATCTCCT...CATAGACTCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTATGCACTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | CACACACCTGGGACCTCATCTGAAAATCAGGCATCTCAGCCTTCAGAGACCAAACCCATTAGACATTTCTaGGTACAGGGGGCCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: HTPGTSSENQASQPSETKPIRHF*VQGAIK Trigger: TTTGATGGCCCCCTGTACCCAGAAATGTCTAATGGG...TTTGGTCTCTGAAGGCTGAGATGCCTGATTTTCAGATGAGGTCCCAGGTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | GTTGCATCTTCAACTTACACAAACCCACAATGGAACTTTGAACATCTTACTGGTGGCTCAGCAAGCTACTaGCTTGGCCCCCTTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VASSTYTNPQWNFEHLTGGSASY*LGPLPP Trigger: AGGGGGAAGGGGGCCAAGCCAGTAGCTTGCTGAGCC...ACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGTGTAAGTTGAAGATGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | AATGAGTGCATAGGAGATATGGACCTTTGTCACACATTTCCAATGGAGTCTATGCCTTCAGCAAGGACCTaGTGTGGACCAGCATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: NECIGDMDLCHTFPMESMPSART*CGPASP Trigger: TGGGGATGCTGGTCCACACCAGGTCCTTGCTGAAGG...CATAGACTCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTATGCACTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR TCA 90 bp | ACAAACCCACAATGGAACTTTGAACATCTTACTGGTGGTGATTTGCATGCAAATTGCTTTCCAGCTCAGTaGGGGACTTGTCAGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TNPQWNFEHLTGGDLHANCFPAQ*GTCQSW Trigger: CCAACTCTGACAAGTCCCTCACTGAGCTGGAAAGCA...ATTTGCATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR GCA 90 bp | ATAGGAGATATGGACCTTTGTCACACATTTCCAATGGAGTCTATGAAAAATGAGCCCGCCTCAGGTACTTaGCATAGCTCTCTTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: IGDMDLCHTFPMESMKNEPASGT*HSSLPH Trigger: ATGGGGAAGAGAGCTATGGCAAGTACCTGAGGCGGG...CTCATTTTTCATAGACTCCATTGGAAATGTGTGACAAAGGTCCATATCTCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR GCA 90 bp | AAATGTATAATTCTTGTACAGGCTAGATCCCACTACCCCTTACTAGGATGGTGTGCTCCTGATGGTATGTaGCAGCAGCTCGTATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KCIILVQARSHYPLLGWCAPDGM*QQLVFV Trigger: GACAAATACGAGCTGCTGGCACATACCATCAGGAGC...ACACCATCCTAGTAAGGGGTAGTGGGATCTAGCCTGTACAAGAATTATACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CCA 90 bp | ACAAACCCACAATGGAACTTTGAACATCTTACTGGTGGTGATTTGCATGCAAATGGGACTTGTCAGAGTTaGAGTAGGCATCCCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: TNPQWNFEHLTGGDLHANGTCQS*SRHPRS Trigger: AGATCGGGGATGCCTACTCCAACTCTGACAAGTCCC...ATTTGCATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR TCA 90 bp | CATCCTTTAGATGGAGTCGAAAGAAGAGATTCTGTTAGAGCAATAAAACCCTTTGCTCGTATTTGTCTCTaGGCCCCACAGAGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HPLDGVERRDSVRAIKPFARICL*APQRCP Trigger: TGGACATCTCTGTGGGGCTCAGAGACAAATACGAGC...AAAGGGTTTTATTGCTCTAACAGAATCTCTTCTTTCGACTCCATCTAAAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| 3UTR CAA 72 bp | TTGCATCTTCAACTTACACAAACCCACAATGGAACTTaGAACATCTTACTGGTGGTGATTTGCATGCAAATT | + |
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Preference number: 4 (lower is better) Translates to: LHLQLTQTHNGT*NILLVVICMQI Trigger: AATTTGCATGCAAATCACCACCAGTAAGATGTTCAAAGTTCCATTGTGGGTTTGTGTAAGTTGAAGATGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS TCA 90 bp | TGCCATAGCTCTCTTCCCCATCCAGGTCGTAGGAGATGCTCTTGCTaGTGCCCTCCAGGACGCGTCCAGCATCCTCCACCTGGCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CHSSLPHPGRRRCSC*CPPGRVQHPPPGGP Trigger: TGGGCCGCCAGGTGGAGGATGCTGGACGCGTCCTGGAGGGCATCAGCAAGAGCATCTCCTACGACCTGGATGGGGAAGAGAGCTATGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 90 bp | TGGAGTAGGCATCCCCGATCTGGTGGGACTCCCGCCTCAGGTACTTaGCATAGCTCTCTTCCCCATCCAGGTCGTAGGAGATGCTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: WSRHPRSGGTPASGT*HSSLPHPGRRRCSC Trigger: GCAAGAGCATCTCCTACGACCTGGATGGGGAAGAGAGCTATGGCAAGTACCTGAGGCGGGAGTCCCACCAGATCGGGGATGCCTACTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CAA 90 bp | GCGAAAGGAGAATCAATGAACTTCCTTGTCTGGCAGGCATGCCACACACCTGGGCAGCAAGCTACTGGCTaGGCCCCCTTCCCCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: AKGESMNFLVWQACHTPGQQATG*APFPLG Trigger: TCCCAGGGGGAAGGGGGCCAAGCCAGTAGCTTGCTG...CCCAGGTGTGTGGCATGCCTGCCAGACAAGGAAGTTCATTGATTCTCCTTTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 90 bp | GTGTGGACCAGCATCCCCAGGAAGTCCTCATTGAGTCTGCTTTCCTaGCGGCTATCCTGCTCTTGGCCCTGCTTGAACTTGCTTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VWTSIPRKSSLSLLS*RLSCSWPCLNLLSS Trigger: GCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCTGGTCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CCA 90 bp | AGCCCCACAGAGATGTCCAGTGTCTCCTTCAGCAAGGACCTGGTGTaGACCAGCATCCCCAGGAAGTCCTCATTGAGTCTGCTTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SPTEMSSVSFSKDLV*TSIPRKSSLSLLSC Trigger: GCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCTGGTCCACACCAGGTCCTTGCTGAAGGAGACACTGGACATCTCTGTGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGATGCAAAGGAGCCACGCACCTCGTCCCCCGCCAGGATGTGGAAGTTTATGCTCTTGGCCCTGCTaGAACTTGCTTTCCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LLMQRSHAPRPPPGCGSLCSWPC*NLLSSS Trigger: TGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCA...TAAACTTCCACATCCTGGCGGGGGACGAGGTGCGTGGCTCCTTTGCATCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 90 bp | ATCCCCAGGAAGTCCTCATTGAGTCTGCTTTCCTGCCGGCTATCCTaGTCTTGGCCCTGCTTGAACTTGCTTTCCAGCTCAGTGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: IPRKSSLSLLSCRLS*SWPCLNLLSSSVRD Trigger: GTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 90 bp | TCCTCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGGCCCTaGTTGAACTTGCTTTCCAGCTCAGTGAGGGACTTGTCAGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSLSLLSCRLSCSWP*LNLLSSSVRDLSEL Trigger: CAACTCTGACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CCA 90 bp | AGGAAGTCCTCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTaGCCCTGCTTGAACTTGCTTTCCAGCTCAGTGAGGGACTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RKSSLSLLSCRLSCS*PCLNLLSSSVRDLS Trigger: TGACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CAA 90 bp | CCTCGTCCCCCGCCAGGATGTGGAAGTTTAATCAGTCTTTCCACACAAATGCATGCCAGCAGCTCGTATTaGTCTCTGAGCCCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PRPPPGCGSLISLSTQMHASSSY*SLSPTE Trigger: CTCTGTGGGGCTCAGAGACAAATACGAGCTGCTGGC...ATGCATTTGTGTGGAAAGACTGATTAAACTTCCACATCCTGGCGGGGGACGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CAA 90 bp | AAATGTATAATTCTTGTACAGGCTAGATCCCACTACCCCTTACTAGGATGGTGTTGGCCCTGCTTGAACTaGCTTTCCAGCTCAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: KCIILVQARSHYPLLGWCWPCLN*LSSSVR Trigger: CCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCA...ACACCATCCTAGTAAGGGGTAGTGGGATCTAGCCTGTACAAGAATTATACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS-3UTR CAA 90 bp | CATCCTTTAGATGGAGTCGAAAGAAGAGATTCTGTTAGAGCAATAAAACCCTTTCCGGCTATCCTGCTCTaGGCCCTGCTTGAACTTGCT | + |
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Preference number: 5 (lower is better) Translates to: HPLDGVERRDSVRAIKPFPAILL*ALLELA Trigger: AGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGG...AAAGGGTTTTATTGCTCTAACAGAATCTCTTCTTTCGACTCCATCTAAAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CCA 72 bp | CTGATGCCCTCCAGGACGCGTCCAGCATCCTCCACCTaGCGGCCCAGTACTGTGAACTCCTCTCGAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LMPSRTRPASST*RPSTVNSSRRV Trigger: CACTCTTCGAGAGGAGTTCACAGTACTGGGCCGCCAGGTGGAGGATGCTGGACGCGTCCTGGAGGGCATCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS TCA 72 bp | CTTCCCCCTGGGAGCAGCGCCTGCGATCACTCACCCTaGAGAGCAGCTGGCATTTCTCGGGGTCATCATTCT | + |
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Preference number: 6 (lower is better) Translates to: LPPGSSACDHSP*RAAGISRGHHS Trigger: AGAATGATGACCCCGAGAAATGCCAGCTGCTCTTCAGGGTGAGTGATCGCAGGCGCTGCTCCCAGGGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS TCA 72 bp | TCTCTTCCCCATCCAGGTCGTAGGAGATGCTCTTGCTaGTGCCCTCCAGGACGCGTCCAGCATCCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SLPHPGRRRCSC*CPPGRVQHPPP Trigger: AGGTGGAGGATGCTGGACGCGTCCTGGAGGGCATCAGCAAGAGCATCTCCTACGACCTGGATGGGGAAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 72 bp | CATCCCCGATCTGGTGGGACTCCCGCCTCAGGTACTTaGCATAGCTCTCTTCCCCATCCAGGTCGTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HPRSGGTPASGT*HSSLPHPGRRR Trigger: TCTCCTACGACCTGGATGGGGAAGAGAGCTATGGCAAGTACCTGAGGCGGGAGTCCCACCAGATCGGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 90 bp | TTCAGCAAGGACCTGGTGTGGACCAGCATCCCCAGGAAGTCCTCATaGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGGCCCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSKDLVWTSIPRKSS*SLLSCRLSCSWPCL Trigger: CAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCTGGTCCACACCAGGTCCTTGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS TCA 72 bp | ACCTGGTGTGGACCAGCATCCCCAGGAAGTCCTCATTaGGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: TWCGPASPGSPH*VCFPAGYPALG Trigger: GCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCTGGTCCACACCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 72 bp | GACCTGGTGTGGACCAGCATCCCCAGGAAGTCCTCATaGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: DLVWTSIPRKSS*SLLSCRLSCSW Trigger: CCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCTGGTCCACACCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 72 bp | AGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGGCCCTaGTTGAACTTGCTTTCCAGCTCAGTGAGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: SLLSCRLSCSWP*LNLLSSSVRDL Trigger: CAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 72 bp | AGCATCCCCAGGAAGTCCTCATTGAGTCTGCTTTCCTaGCGGCTATCCTGCTCTTGGCCCTGCTTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SIPRKSSLSLLS*RLSCSWPCLNL Trigger: CAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGGGGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 72 bp | TCCTGCCGGCTATCCTGCTCTTGGCCCTGCTTGAACTaGCTTTCCAGCTCAGTGAGGGACTTGTCAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SCRLSCSWPCLN*LSSSVRDLSEL Trigger: CAACTCTGACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 72 bp | CTGCTTTCCTGCCGGCTATCCTGCTCTTGGCCCTGCTaGAACTTGCTTTCCAGCTCAGTGAGGGACTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LLSCRLSCSWPC*NLLSSSVRDLS Trigger: TGACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 90 bp | CAGGAAGTCCTCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTaGGCCCTGCTTGAACTTGCTTTCCAGCTCAGTGAGGGACTTGTC | + |
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Preference number: 6 (lower is better) Translates to: QEVLIESAFLPAILL*ALLELAFQLSEGLV Trigger: GACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CCA 72 bp | TCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTaGCCCTGCTTGAACTTGCTTTCCAGCTCAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLSLLSCRLSCS*PCLNLLSSSVR Trigger: CCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 72 bp | CTCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTaGGCCCTGCTTGAACTTGCTTTCCAGCTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LIESAFLPAILL*ALLELAFQLSE Trigger: CTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS CAA 90 bp | TCATTGAGTCTGCTTTCCTGCCGGCTATCCTGCTCTTGGCCCTGCTaGAACTTGCTTTCCAGCTCAGTGAGGGACTTGTCAGAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLSLLSCRLSCSWPC*NLLSSSVRDLSELE Trigger: CTCCAACTCTGACAAGTCCCTCACTGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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| CDS GCA 72 bp | AAGTCCTCATTGAGTCTGCTTTCCTGCCGGCTATCCTaGTCTTGGCCCTGCTTGAACTTGCTTTCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KSSLSLLSCRLS*SWPCLNLLSSS Trigger: TGAGCTGGAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099626.5 |
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