Pregenerated sensors for FHL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032643Ensembl transcript IDs: ENSMUST00000038684.6, ENSMUST00000106199.10, ENSMUST00000145942.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTaGCTCCACCGAGTCCTGCGCCCTCGCCGCCGCCGCTCCCACCTG | + |
|
Preference number: 1 (lower is better) Translates to: KSSCGANVGLRRTHT*LHRVLRPRRRRSHL Trigger: CAGGTGGGAGCGGCGGCGGCGAGGGCGCAGGACTCGGTGGAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR GCA 90 bp | GGCCACACAGTAAGGATCATCATCCCGAGATGTGAACTGCTGCCCTaGAAGGGGCGTCTTGCACCCAGTGCAGACCAGGCACTCTCGGTG | + |
|
Preference number: 1 (lower is better) Translates to: GHTVRIIIPRCELLP*KGRLAPSADQALSV Trigger: CACCGAGAGTGCCTGGTCTGCACTGGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR CCA 90 bp | GAACTTGATCTCCGTCTGGTACAAAGCCTTGGCCCACCAGGGAGGTaGAGCAGCGGGCACAGGAAAAGCAGCTGTGGTGCCAATGTCGGT | + |
|
Preference number: 1 (lower is better) Translates to: ELDLRLVQSLGPPGR*SSGHRKSSCGANVG Trigger: ACCGACATTGGCACCACAGCTGCTTTTCCTGTGCCCGCTGCTCCACCTCCCTGGTGGGCCAAGGCTTTGTACCAGACGGAGATCAAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR TCA 90 bp | GTTCTCCAAAGCAGGCCACACAGTAAGGATCATCATCCCGAGATGTaGACTGCTGCCCTGCAAGGGGCGTCTTGCACCCAGTGCAGACCA | + |
|
Preference number: 1 (lower is better) Translates to: VLQSRPHSKDHHPEM*TAALQGASCTQCRP Trigger: TGGTCTGCACTGGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTGGCCTGCTTTGGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR CCA 90 bp | CTTGACTTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTaGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LDLKRPRPQSSGLEG*GVRALMWGTFLESR Trigger: TCTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAAGTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CCA 90 bp | CCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTaGGGAACATTTCTGGAATCCAGACTTGGAGAAAGGCTTAAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: PQSSGLEGWGVRALM*GTFLESRLGERLKS Trigger: TGACTTAAGCCTTTCTCCAAGTCTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CAA 90 bp | AGTCCTGCGCCCTCGCCGCCGCCGCTCCCACCTGTGATGGGGCGCTaGCAGCTGCTGCACTTGGGTGCAAAGAGTTCTCCAAAGCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SPAPSPPPLPPVMGR*QLLHLGAKSSPKQA Trigger: GGCCTGCTTTGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCGGCGGCGAGGGCGCAGGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTGCAGCCCTGGCATAGAACTTGATCTCCGTCTGGTACAAAGCCTTGGCCCACGCCGCTCCCACCTGTaGTGGGGCGCTTGCAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GCSPGIELDLRLVQSLGPRRSHL*WGACSC Trigger: GCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCG...TGGGCCAAGGCTTTGTACCAGACGGAGATCAAGTTCTATGCCAGGGCTGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCACAACAGCCCAGATTTaGGGGCCTGGGTCGGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SGNRASNLPASCCRATWSTTAQI*GPGSGS Trigger: ACTCCCCGACCCAGGCCCCCAAATCTGGGCTGTTGT...GCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTGTGATGGGGCGCTTGCAGCTGCTGCACTTGGGTGCAAAGAGTTCTCCAAAGCATCATCCCGAGATGTaGACTGCTGCCCTGCAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PVMGRLQLLHLGAKSSPKHHPEM*TAALQG Trigger: CCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATG...CTTTGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGATCCTGAAGTCCCAATaGGTGGGGAGCGGGGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: NLWKQGEQPSCFLLQGNMILKSQ*VGSGGW Trigger: CCAACCCCCGCTCCCCACTCATTGGGACTTCAGGAT...CATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCTGCTCAGAGAGAGCAGTaGGATGGGGGTGAGGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LETGRATFLLPVAGQHGAAQREQ*DGGEVK Trigger: TTTGACCTCACCCCCATCCCACTGCTCTCTCTGAGC...AGCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCGTTGGGCCCCAGAAGTaGTTCAGAAAAGGCGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LKRPRPQSSGLEGWGVRAVGPQK*FRKGAK Trigger: TTTGGCGCCTTTTCTGAACCACTTCTGGGGCCCAAC...GGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR GCA 90 bp | CTCAGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTTGCTATACATACAGCTaGAGCTCAGAGAGAGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LRGWTAPCTLQPSNQGAPCYTYS*SSERAV Trigger: CACTGCTCTCTCTGAGCTGCAGCTGTATGTATAGCA...AGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CAA 90 bp | CCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTaGATGTGGGGAACATTTCTGGAATCCAGACTTGGAGAAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PRPQSSGLEGWGVRA*MWGTFLESRLGERL Trigger: AAGCCTTTCTCCAAGTCTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCAAGGCGCCAAAGTCTTaGACTCTTGGTTTGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LKRPRPQSSGLEGWGVRAKAPKS*TLGLGK Trigger: CTTTCCCAAACCAAGAGTTCAAGACTTTGGCGCCTT...GGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTGCCTCCACGGCGCTTGCAGCTGCTaGACTTGGGTGCAAAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KSSCGANVGLRRTHTCLHGACSC*TWVQRV Trigger: AACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCC...GTGGAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCCTTGAACTCTTGGTTTaGGAAAGAGGAGAGTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LKRPRPQSSGLEGWGVRALELLV*ERGESG Trigger: TCCTGACTCTCCTCTTTCCCAAACCAAGAGTTCAAG...GGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGCGGGCACAGGAAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACACTTGAACTCTTGGTTTaGGAAAGAGGAGAGTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QRAQEKQLWCQCRSSKDTLELLV*ERGESG Trigger: TCCTGACTCTCCTCTTTCCCAAACCAAGAGTTCAAG...TGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTTCCTGTGCCCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTGCTATACATACAGTGGGTGACTGAATCCTaGAGTCCCAATGAGTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PCTLQPSNQGAPNLLYIQWVTES*SPNEWG Trigger: TCCCCACTCATTGGGACTTCAGGATTCAGTCACCCA...CTGTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR TCA 90 bp | TCAGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTATGTGTTAAAATTGGGTaGCTGAATCCTGAAGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SEAGQHPVPYNPLTREPLCVKIG*LNPEVP Trigger: TGGGACTTCAGGATTCAGTCACCCAATTTTAACACA...TAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | CAATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGTCAGAGCCTTGATGTaGGGAACATTTCTGGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: QSLETGRATFLLPVAGQHVRALM*GTFLES Trigger: GGATTCCAGAAATGTTCCCCACATCAAGGCTCTGAC...ATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | GGTGAGGTCAAACCGGGTGTACAATCTATTTTTGAAGACTTCTTAGGCACCTGCCTCAGAGTTCAGGTTTaGAGGGCTGGGGTGTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GEVKPGVQSIFEDFLGTCLRVQV*RAGVSE Trigger: CTCTGACACCCCAGCCCTCCAAACCTGAACTCTGAG...GCAGGTGCCTAAGAAGTCTTCAAAAATAGATTGTACACCCGGTTTGACCTCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTGCTATACATACAGCTGTGTACAATCTATTTTTaGAGACTTCTTAGGCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: CTLQPSNQGAPNLLYIQLCTIYF*RLLRHL Trigger: CAGGTGCCTAAGAAGTCTTCAAAAATAGATTGTACA...CAGCTGTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CCA 90 bp | CCGGGTGTACAATCTATTTTTGAAGACTTCTTAGGCACCTGCAGAAAAACTAAATGTGGGGAACATTTCTaGAATCCAGACTTGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PGVQSIFEDFLGTCRKTKCGEHF*NPDLEK Trigger: TTTCTCCAAGTCTGGATTCCAGAAATGTTCCCCACA...TTTAGTTTTTCTGCAGGTGCCTAAGAAGTCTTCAAAAATAGATTGTACACCCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR TCA 72 bp | CGAGTCCTGCGCCCTCGCCGCCGCCGCTCCCACCTGTaGTGGGGCGCTTGCAGCTGCTGCACTTGGGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVLRPRRRRSHL*WGACSCCTWVQ Trigger: TTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCGGCGGCGAGGGCGCAGGACTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCGTTCTAGGGAGGGGTaGGGCCCCAGAAGTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWKQGEQPSCFLLQGNMERSREG*GPRSGS Trigger: TGAACCACTTCTGGGGCCCAACCCCTCCCTAGAACG...CTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATCACAACAGCCCAGATTaGGGGGCCTGGGTCGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSLETGRATFLLPVAGQHHNSPD*GAWVGE Trigger: CTCCCCGACCCAGGCCCCCAAATCTGGGCTGTTGTG...ATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAGTCAGGATCCTCCACTCAGGGGCCTGCTTGGCTGCAGCCCTGGCATAGATTGCAGCTGCTGCACTaGGGTGCAAAGAGTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GESGSSTQGPAWLQPWHRLQLLH*GAKSSP Trigger: TGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAA...TCTATGCCAGGGCTGCAGCCAAGCAGGCCCCTGAGTGGAGGATCCTGACTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR TCA 72 bp | AGCAGGCCACACAGTAAGGATCATCATCCCGAGATGTaGACTGCTGCCCTGCAAGGGGCGTCTTGCACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SRPHSKDHHPEM*TAALQGASCTQ Trigger: CTGGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTGGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR GCA 72 bp | GTAAGGATCATCATCCCGAGATGTGAACTGCTGCCCTaGAAGGGGCGTCTTGCACCCAGTGCAGACCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VRIIIPRCELLP*KGRLAPSADQA Trigger: TGCCTGGTCTGCACTGGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR GCA 72 bp | ACCTGTGATGGGGCGCTTGCAGCTGCTGCACTTGGGTaGAAAGAGTTCTCCAAAGCAGGCCACACAGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TCDGALAAAALG*KEFSKAGHTVR Trigger: CCTTACTGTGTGGCCTGCTTTGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGTGGGGTGTCAGAGCCTaGATGTGGGGAACATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISGNRASNLPASCCRATWWGVRA*MWGTFL Trigger: CAGAAATGTTCCCCACATCAAGGCTCTGACACCCCA...CCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CCA 72 bp | TCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTaGGGAACATTTCTGGAATCCAGACTTGGAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLEGWGVRALM*GTFLESRLGER Trigger: CCTTTCTCCAAGTCTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CCA 72 bp | TCTGCTATACATACAGCTGCAGCTCAGAGAGAGCAGTaGGATGGGGGTGAGGTCAAACCGGGTGTACAATCT | + |
|
Preference number: 3 (lower is better) Translates to: SAIHTAAAQREQ*DGGEVKPGVQS Trigger: AGATTGTACACCCGGTTTGACCTCACCCCCATCCCACTGCTCTCTCTGAGCTGCAGCTGTATGTATAGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCTCAAAGTCTTGAACTCTaGGTTTGGGAAAGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LETGRATFLLPVAGQHGAQSLEL*VWERGE Trigger: CTCTCCTCTTTCCCAAACCAAGAGTTCAAGACTTTG...AGCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR GCA 72 bp | GTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTaGTATACATACAGCTGCAGCTCAGAGAGAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPYNPLTREPLI*YTYSCSSERAV Trigger: CACTGCTCTCTCTGAGCTGCAGCTGTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CCA 72 bp | TTTCTGGAATCCAGACTTGGAGAAAGGCTTAAGTCATaGGTGTTCCACAACAGCCCAGATTTGGGGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLESRLGERLKS*VFHNSPDLGAW Trigger: CCAGGCCCCCAAATCTGGGCTGTTGTGGAACACCCATGACTTAAGCCTTTCTCCAAGTCTGGATTCCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CCA 72 bp | AAGTGGTTCAGAAAAGGCGCCAAAGTCTTGAACTCTTaGTTTGGGAAAGAGGAGAGTCAGGATCCTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KWFRKGAKVLNS*FGKEESQDPPL Trigger: GAGTGGAGGATCCTGACTCTCCTCTTTCCCAAACCAAGAGTTCAAGACTTTGGCGCCTTTTCTGAACCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCAAAGCAGGCCACACAGTAAGGATCATCATCCCGAGATGTGAACTGCTGAAAGGCGCCAAAGTCTaGAACTCTTGGTTTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSKAGHTVRIIIPRCELLKGAKV*NSWFGK Trigger: TTTCCCAAACCAAGAGTTCAAGACTTTGGCGCCTTT...CAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTGGCCTGCTTTGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTGCTATACATACAGCTGAAAGGCGCCAAAGTCTaGAACTCTTGGTTTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CTLQPSNQGAPNLLYIQLKGAKV*NSWFGK Trigger: TTTCCCAAACCAAGAGTTCAAGACTTTGGCGCCTTT...CAGCTGTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CAA 72 bp | CCCTCGCCGCCGCCGCTCCCACCTGTGATGGGGCGCTaGCAGCTGCTGCACTTGGGTGCAAAGAGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPPPLPPVMGR*QLLHLGAKSSP Trigger: TGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCGGCGGCGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGCGCCGCTCCCACCTGTaGTGGGGCGCTTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGGLGCQSLDVGNISGIQRRSHL*WGACSC Trigger: GCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCG...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTACACTGTCCTGACAGGTaGAGGGCTCATCGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEAGQHPVPYNPLTREPLHCPDR*RAHRQG Trigger: CCCTTGCCGATGAGCCCTTCACCTGTCAGGACAGTG...TAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTCATCATCCCGAGATGTaGACTGCTGCCCTGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGWTAPCTLQPSNQGAPHHPEM*TAALQG Trigger: CCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATG...AGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | CAATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATCGGGAGCCCAGCGGCTaGTCACAGCCACTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLETGRATFLLPVAGQHREPSG*SQPLHR Trigger: TCTGTGCAGTGGCTGTGAGCAGCCGCTGGGCTCCCG...ATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGTCGGCAAGGGAGCGCTaGCATCGGCAGCAGCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FGGLGCQSLDVGNISGIQSARER*HRQQRK Trigger: CTTCCGCTGCTGCCGATGCCAGCGCTCCCTTGCCGA...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCGAAGGACACATACTTaGCTCCACCGAGTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWTAPCTLQPSNQGAPNRRTHT*LHRVLR Trigger: GCGCAGGACTCGGTGGAGGCAAGTATGTGTCCTTCG...ATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCTATGTCACTCCACCCTaGGTCAGCGTCTTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASNLPASCCRATWSYVTPP*VSVLLQ Trigger: CTGCAGCAAGACGCTGACCCAGGGTGGAGTGACATA...GCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | GGCATAGAACTTGATCTCCGTCTGGTACAAAGCCTTGGCCCACCAGGGAGGTGGTTGAATCATGCCCAATaGGCTGCTGGCACTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIELDLRLVQSLGPPGRWLNHAQ*AAGTQH Trigger: GTGCTGAGTGCCAGCAGCTCATTGGGCATGATTCAA...CCACCTCCCTGGTGGGCCAAGGCTTTGTACCAGACGGAGATCAAGTTCTATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGCAAAGAGTTCTCCAAAGCAGGCCACACAGTAAGGATCATCATCCCGAGCACTGTCCTGACAGGTaGAGGGCTCATCGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVQRVLQSRPHSKDHHPEHCPDR*RAHRQG Trigger: CCCTTGCCGATGAGCCCTTCACCTGTCAGGACAGTG...CTCGGGATGATGATCCTTACTGTGTGGCCTGCTTTGGAGAACTCTTTGCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCTCATGCCCAATGAGCTaGTGGCACTCAGCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLEGWGVRALMWGTFLESSCPMS*WHSAQV Trigger: CACCTGTGCTGAGTGCCAGCAGCTCATTGGGCATGA...GGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | CAATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATTGGGGCGCTTGCAGCTaGTGCACTTGGGTGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLETGRATFLLPVAGQHWGACS*CTWVQR Trigger: TCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCA...ATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGAGGGGCCTGCTTGGCTaGAGCCCTGGCATAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FGGLGCQSLDVGNISGIQRGLLG*SPGIEL Trigger: AAGTTCTATGCCAGGGCTGCAGCCAAGCAGGCCCCT...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGCCACACAGTAAGGATCATCATCCCGAGATGTGAACTGCTGCCCTGCAAGTGCCCAATGAGCTGCTaGCACTCAGCACAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGHTVRIIIPRCELLPCKCPMSC*HSAQVL Trigger: CAACACCTGTGCTGAGTGCCAGCAGCTCATTGGGCA...CTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTGGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR TCA 90 bp | AATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGAGAAGCTCACTGTCCTaGCAGGTGAAGGGCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: NLWKQGEQPSCFLLQGNMRSSLS*QVKGSS Trigger: CGATGAGCCCTTCACCTGTCAGGACAGTGAGCTTCT...CATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | AATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGTCTCGGTGCCAGGGCTaGTCACGATATGTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLWKQGEQPSCFLLQGNMSRCQG*SRYVTP Trigger: TGGAGTGACATATCGTGATCAGCCCTGGCACCGAGA...CATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | CGAGATGTGAACTGCTGCCCTGCAAGGGGCGTCTTGCACCCAGTGCAGACCAGGCGTACAAGGACTCGTTaGATTTTGCACAGTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RDVNCCPARGVLHPVQTRRTRTR*ILHSQM Trigger: CATTTGACTGTGCAAAATGCAACGAGTCCTTGTACG...CCTGGTCTGCACTGGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACATCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCAGAAAGCAGTGTTCATaGCACGTCTGGCCTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SGNRASNLPASCCRATWSRKQCS*HVWPPY Trigger: GTATGGAGGCCAGACGTGGCATGAACACTGCTTTCT...GCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | CAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTGGCGCTTGCAGCTGCTaGACTTGGGTGCAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGLEGWGVRALMWGTFGACSC*TWVQRV Trigger: AACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCC...AAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTTTGAATCATGCCCAATaGGCTGCTGGCACTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSGLEGWGVRALMWGTFLNHAQ*AAGTQH Trigger: GTGCTGAGTGCCAGCAGCTCATTGGGCATGATTCAA...AAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCCCTGGCATAGAACTTaGTCTCCGTCTGGTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGWTAPCTLQPSNQGAPNPWHRT*SPSGTK Trigger: CTTTGTACCAGACGGAGATCAAGTTCTATGCCAGGG...ATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | AGGAAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTGCCTCTCATGCCCAATGAGCTaGTGGCACTCAGCACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSSCGANVGLRRTHTCLSCPMS*WHSAQV Trigger: CACCTGTGCTGAGTGCCAGCAGCTCATTGGGCATGA...GAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR GCA 90 bp | CTTGACTTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGTTCCCTTGAATCATaGCCAATGAGCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDLKRPRPQSSGLEGWGVSSLES*PMSCWH Trigger: GTGCCAGCAGCTCATTGGGCATGATTCAAGGGAACT...GACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAAGTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | CACACAGTAAGGATCATCATCCCGAGATGTGAACTGCTGCCCTGCAAGGGGCGTAGTTCCCTTGAATCATaGCCAATGAGCTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTVRIIIPRCELLPCKGRSSLES*PMSCWH Trigger: GTGCCAGCAGCTCATTGGGCATGATTCAAGGGAACT...ACGCCCCTTGCAGGGCAGCAGTTCACATCTCGGGATGATGATCCTTACTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR GCA 90 bp | CTTGACTTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCGAAAAGCAGCTGTGGTaGCAATGTCGGTCTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDLKRPRPQSSGLEGWGVEKQLW*QCRSSK Trigger: CTTCGAAGACCGACATTGGCACCACAGCTGCTTTTC...GACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAAGTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTGGACAGCACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATACTCAGCACAGGTGTTaGCGAAGGTGTTGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWTAPCTLQPSNQGAPNTQHRC*RRCCHS Trigger: GCTATGACAACACCTTCGCCAACACCTGTGCTGAGT...ATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTGCTGTCCAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGCAGGAAAAGCAGCTGTaGTGCCAATGTCGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FGGLGCQSLDVGNISGIQQEKQL*CQCRSS Trigger: CGAAGACCGACATTGGCACCACAGCTGCTTTTCCTG...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTGCCTCTATGTCACTCCACCCTaGGTCAGCGTCAGGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSSCGANVGLRRTHTCLYVTPP*VSVRHD Trigger: GTCATGCCTGACGCTGACCCAGGGTGGAGTGACATA...GAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| 3UTR CAA 72 bp | CAGAGTTCAGGTTTGGAGGGCTGGGGTGTCAGAGCCTaGATGTGGGGAACATTTCTGGAATCCAGACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSGLEGWGVRA*MWGTFLESRLG Trigger: TCCAAGTCTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACCTGAACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCGGACTCGTTGCATTTTaGACAGTCAAATGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEGWGVRALMWGTFLESGLVAF*TVKCLA Trigger: AGCGAGGCATTTGACTGTGCAAAATGCAACGAGTCC...GGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | AATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGCTGTCTGGATGTATTTaGGGCCGTACAAGGACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NLWKQGEQPSCFLLQGNMLSGCI*GRTRTR Trigger: ACGAGTCCTTGTACGGCCGCAAATACATCCAGACAG...CATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CCA 90 bp | TACCCTAGAAGTCTTGACTTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGTCTGGTACAAAGCCTTaGCCCACCAGGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPRSLDLKRPRPQSSGLESGTKP*PTREVE Trigger: CTCCACCTCCCTGGTGGGCCAAGGCTTTGTACCAGA...CTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAAGTCAAGACTTCTAGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTGCCTCCGGACTCGTTGCATTTTaGACAGTCAAATGCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKAAVVPMSVFEGHILASGLVAF*TVKCLA Trigger: AGCGAGGCATTTGACTGTGCAAAATGCAACGAGTCC...GGAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAAGCAGCTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTTGCCTCACTCAGCACAGGTGTTaGCGAAGGTGTTGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSSCGANVGLRRTHTCLTQHRC*RRCCHS Trigger: GCTATGACAACACCTTCGCCAACACCTGTGCTGAGT...GAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAGCTGCTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR GCA 90 bp | CACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTGCTATACATACGCTGCTCACAGCCACTaGACAGAAAGCAGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HPVPYNPLTREPLICYTYAAHSH*TESSVH Trigger: ATGAACACTGCTTTCTGTGCAGTGGCTGTGAGCAGC...GTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | AATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGCGTACAAGGACTCGTTaGATTTTGCACAGTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLWKQGEQPSCFLLQGNMRTRTR*ILHSQM Trigger: CATTTGACTGTGCAAAATGCAACGAGTCCTTGTACG...CATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR GCA 90 bp | GTCAAACCGGGTGTACAATCTATTTTTGAAGACTTCTTAGGCACCTGCAGAAAATGTGAACTGCTGCCCTaGAAGGGGCGTCTTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: VKPGVQSIFEDFLGTCRKCELLP*KGRLAP Trigger: GGGTGCAAGACGCCCCTTGCAGGGCAGCAGTTCACA...TTTTCTGCAGGTGCCTAAGAAGTCTTCAAAAATAGATTGTACACCCGGTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| 3UTR CAA 72 bp | GAAGTGGTTCAGAAAAGGCGCCAAAGTCTTGAACTCTaGGTTTGGGAAAGAGGAGAGTCAGGATCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EVVQKRRQSLEL*VWERGESGSST Trigger: AGTGGAGGATCCTGACTCTCCTCTTTCCCAAACCAAGAGTTCAAGACTTTGGCGCCTTTTCTGAACCACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAACCGGGTGTACAATCTATTTTTGAAGACTTCTTAGGCACCTGCAGAAAATGCCCAATGAGCTGCTaGCACTCAGCACAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKPGVQSIFEDFLGTCRKCPMSC*HSAQVL Trigger: CAACACCTGTGCTGAGTGCCAGCAGCTCATTGGGCA...TTTTCTGCAGGTGCCTAAGAAGTCTTCAAAAATAGATTGTACACCCGGTTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS TCA 90 bp | CATGCCACGTCTGGCCTCCATACTCCAGCTTCCGGGACCCAGGCATaGCAGTCTCCCCGCAGGCAGAACACTGGGACGAGAAGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HATSGLHTPASGTQA*QSPRRQNTGTRRLC Trigger: GCACAGCCTTCTCGTCCCAGTGTTCTGCCTGCGGGGAGACTGTCATGCCTGGGTCCCGGAAGCTGGAGTATGGAGGCCAGACGTGGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 |
||
| CDS TCA 90 bp | GGCGTCTTGCACCCAGTGCAGACCAGGCACTCTCGGTGCCAGGGCTaGTCACGATATGTCACTCCACCCTGGGTCAGCGTCTTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLHPVQTRHSRCQG*SRYVTPPWVSVLLQ Trigger: CTGCAGCAAGACGCTGACCCAGGGTGGAGTGACATATCGTGATCAGCCCTGGCACCGAGAGTGCCTGGTCTGCACTGGGTGCAAGACGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 |
||
| CDS-3UTR CAA 90 bp | TCCTGCGCCCTCGCCGCCGCCGCTCCCACCTGTGATGGGGCGCTTGCAGCTGCTCCGTACAAGGACTCGTaGCATTTTGCACAGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCALAAAAPTCDGALAAAPYKDS*HFAQSN Trigger: ATTTGACTGTGCAAAATGCAACGAGTCCTTGTACGG...AGCAGCTGCAAGCGCCCCATCACAGGTGGGAGCGGCGGCGGCGAGGGCGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS GCA 90 bp | TGTCAGGCACGAAGGAGCGGGAGCCCAGCGGCTGCTCACAGCCACTaGACAGAAAGCAGTGTTCATGCCACGTCTGGCCTCCATACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQARRSGSPAAAHSH*TESSVHATSGLHTP Trigger: TGGAGTATGGAGGCCAGACGTGGCATGAACACTGCTTTCTGTGCAGTGGCTGTGAGCAGCCGCTGGGCTCCCGCTCCTTCGTGCCTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGCCCTGGGTCAGCGTCTaGCTGCAGCGGGCACACCGA | + |
|
Preference number: 5 (lower is better) Translates to: ISGNRASNLPASCCRATWPWVSV*LQRAHR Trigger: TCGGTGTGCCCGCTGCAGCAAGACGCTGACCCAGGG...CCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS TCA 90 bp | CTGTGCAGTAACACTCATTACACAGAAGCTCACTGTCCTGACAGGTaGAGGGCTCATCGGCAAGGGAGCGCTGGCATCGGCAGCAGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCSNTHYTEAHCPDR*RAHRQGSAGIGSSG Trigger: TCCGCTGCTGCCGATGCCAGCGCTCCCTTGCCGATGAGCCCTTCACCTGTCAGGACAGTGAGCTTCTGTGTAATGAGTGTTACTGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGCCTGTGATGGGGCGCTaGCAGCTGCTGCACTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FGGLGCQSLDVGNISGIQPVMGR*QLLHLG Trigger: ACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGG...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGGTCTGGTACAAAGCCTaGGCCCACCAGGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGGLGCQSLDVGNISGIQVWYKA*AHQGGG Trigger: TCCACCTCCCTGGTGGGCCAAGGCTTTGTACCAGAC...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGCTTTGCAGCTGCTGCACTaGGGTGCAAAGAGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LETGRATFLLPVAGQHGALQLLH*GAKSSP Trigger: TGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAA...AGCTCCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGGCTGGGGTGTCAGAGCCTTGATGTGGGGAACATTTCTGGAATCCAGTCGAAGGACACATACTaGCCTCCACCGAGTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FGGLGCQSLDVGNISGIQSKDTY*PPPSPA Trigger: CGCAGGACTCGGTGGAGGCAAGTATGTGTCCTTCGA...CTGGATTCCAGAAATGTTCCCCACATCAAGGCTCTGACACCCCAGCCCTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CAA 90 bp | GCGCTTGCAGCTGCTGCACTTGGGTGCAAAGAGTTCTCCAAAGCAGGCCACACAAGGACTCGTTGCATTTaGCACAGTCAAATGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALAAAALGCKEFSKAGHTRTRCI*HSQMPR Trigger: GCGAGGCATTTGACTGTGCAAAATGCAACGAGTCCT...TGTGTGGCCTGCTTTGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS-3UTR CAA 90 bp | CTTGACTTAAAGAGGCCTAGGCCTCAGAGTTCAGGTTTGGAGGGCTGGGGTGTCTCTGTCTGGATGTATTaGCGGCCGTACAAGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LDLKRPRPQSSGLEGWGVSVWMY*RPYKDS Trigger: CGAGTCCTTGTACGGCCGCAAATACATCCAGACAGA...GACACCCCAGCCCTCCAAACCTGAACTCTGAGGCCTAGGCCTCTTTAAGTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS-3UTR CAA 90 bp | ATCTCTGGAAACAGGGCGAGCAACCTTCCTGCTTCCTGTTGCAGGGCAACATGGAGGACTCGTTGCATTTaGCACAGTCAAATGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ISGNRASNLPASCCRATWRTRCI*HSQMPR Trigger: GCGAGGCATTTGACTGTGCAAAATGCAACGAGTCCT...CCATGTTGCCCTGCAACAGGAAGCAGGAAGGTTGCTCGCCCTGTTTCCAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS GCA 90 bp | CATAGCACGGAACGCAGTAGGGGCCACTGTCTGTCTGGATGTATTTaGGGCCGTACAAGGACTCGTTGCATTTTGCACAGTCAAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSTERSRGHCLSGCI*GRTRTRCILHSQMP Trigger: AGGCATTTGACTGTGCAAAATGCAACGAGTCCTTGTACGGCCGCAAATACATCCAGACAGACAGTGGCCCCTACTGCGTTCCGTGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||
| CDS-3UTR CAA 90 bp | CACCCTGTACCTTACAACCCTCTAACCAGGGAGCCCCTAATCTGCTATACATACCCGTACAAGGACTCGTaGCATTTTGCACAGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: HPVPYNPLTREPLICYTYPYKDS*HFAQSN Trigger: ATTTGACTGTGCAAAATGCAACGAGTCCTTGTACGG...GTATGTATAGCAGATTAGGGGCTCCCTGGTTAGAGGGTTGTAAGGTACAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038684.6 |
||
| CDS TCA 72 bp | TCTGGCCTCCATACTCCAGCTTCCGGGACCCAGGCATaGCAGTCTCCCCGCAGGCAGAACACTGGGACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGLHTPASGTQA*QSPRRQNTGTR Trigger: TCTCGTCCCAGTGTTCTGCCTGCGGGGAGACTGTCATGCCTGGGTCCCGGAAGCTGGAGTATGGAGGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 |
||
| CDS TCA 72 bp | ACGATATGTCACTCCACCCTGGGTCAGCGTCAGGCATaGCAGTCTCCCCGCAGGCAGAACACTGGGACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TICHSTLGQRQA*QSPRRQNTGTR Trigger: TCTCGTCCCAGTGTTCTGCCTGCGGGGAGACTGTCATGCCTGACGCTGACCCAGGGTGGAGTGACATATCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145942.8 |
||
| CDS GCA 72 bp | GGCTGCTCACAGCCACTGCACAGAAAGCAGTGTTCATaGCACGTCTGGCCTCCATACTCCAGCTTCCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GCSQPLHRKQCS*HVWPPYSSFRD Trigger: GTCCCGGAAGCTGGAGTATGGAGGCCAGACGTGGCATGAACACTGCTTTCTGTGCAGTGGCTGTGAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 |
||
| CDS CAA 72 bp | CTGTGGTGCCAATGTCGGTCTTCGAAGGACACATACTaGCCTCCACCGAGTCCTGTGATGGGGCGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LWCQCRSSKDTY*PPPSPVMGRLQ Trigger: CTGCAAGCGCCCCATCACAGGACTCGGTGGAGGCAAGTATGTGTCCTTCGAAGACCGACATTGGCACCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106199.10 |
||
| CDS TCA 72 bp | AACACTCATTACACAGAAGCTCACTGTCCTGACAGGTaGAGGGCTCATCGGCAAGGGAGCGCTGGCATCGGC | + |
|
Preference number: 6 (lower is better) Translates to: NTHYTEAHCPDR*RAHRQGSAGIG Trigger: GCCGATGCCAGCGCTCCCTTGCCGATGAGCCCTTCACCTGTCAGGACAGTGAGCTTCTGTGTAATGAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||
| CDS GCA 72 bp | TCCTGTGATGGGGCGCTTGCAGCTGCTGCACTTGGGTaGAAAGAGTTCTCCAAAGCAGGCCACACAGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCDGALAAAALG*KEFSKAGHTVR Trigger: CCTTACTGTGTGGCCTGCTTTGGAGAACTCTTTGCACCCAAGTGCAGCAGCTGCAAGCGCCCCATCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106199.10 |
||
| CDS TCA 72 bp | GGTCCTCATAGAACAGTTCCCTTGAATCATGCCCAATaGGCTGCTGGCACTCAGCACAGGTGTTGGCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPHRTVPLNHAQ*AAGTQHRCWRR Trigger: CCTTCGCCAACACCTGTGCTGAGTGCCAGCAGCTCATTGGGCATGATTCAAGGGAACTGTTCTATGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||
| CDS GCA 72 bp | TCTCCCCGCAGGCAGAACACTGGGACGAGAAGGCTGTaGAGTAACACTCATTACACAGAAGCTCACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRRQNTGTRRL*SNTHYTEAHCP Trigger: AGGACAGTGAGCTTCTGTGTAATGAGTGTTACTGCACAGCCTTCTCGTCCCAGTGTTCTGCCTGCGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||
| CDS GCA 72 bp | GAACGCAGTAGGGGCCACTGTCTGTCTGGATGTATTTaGGGCCGTACAAGGACTCGTTGCATTTTGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: ERSRGHCLSGCI*GRTRTRCILHS Trigger: ACTGTGCAAAATGCAACGAGTCCTTGTACGGCCGCAAATACATCCAGACAGACAGTGGCCCCTACTGCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038684.6 ENSMUST00000106199.10 ENSMUST00000145942.8 |
||