Pregenerated sensors for FHL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008136Ensembl transcript IDs: ENSMUST00000008280.14, ENSMUST00000185893.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATTaGCTGGTTATGAAAGAAAACATCCGAATCTCTGCGCCACGCGCT | + |
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Preference number: 1 (lower is better) Translates to: QEEASWWLVGIRTQH*LVMKENIRISAPRA Trigger: AGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR TCA 90 bp | CTTGTCCCCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTaGAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LVPTEKKRTKGFQQM*SQGSKRKPRGGWWE Trigger: TTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGGGGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR CCA 90 bp | GTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTaGCTGGTGGGAATCAGAACACAGCATTGCCTGGTTATGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: VSTNVKPGQQEEASW*LVGIRTQHCLVMKE Trigger: TTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR CAA 90 bp | GCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATaGCCTGGTTATGAAAGAAAACATCCGAATCTCTGCGCCACGCGC | + |
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Preference number: 2 (lower is better) Translates to: ARGSLVVAGGNQNTA*PGYERKHPNLCATR Trigger: GCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGACCTCGTGGTGGCTGGTaGGAATCAGAACACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: LRRKELKGFNKCEARAARPRGGW*ESEHSI Trigger: AATGCTGTGTTCTGATTCCCACCAGCCACCACGAGG...TCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTTACATAAAAAGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAAGAGGAAGCCTCGTGGTaGCTGGTGGGAATCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: RFYIKRKSQSCKSQLSLEEEASW*LVGIRT Trigger: TGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTC...TTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCTTTTTATGTAAAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTCTAGGTTTTACATAAAAAGGAAGTCACAAAGCTGCAAATCCCAGCTCGGGTTTCAACAAATGTaGAGCCAGGGCAGCAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSSRFYIKRKSQSCKSQLGFQQM*SQGSKR Trigger: CCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCC...GAGCTGGGATTTGCAGCTTTGTGACTTCCTTTTTATGTAAAACCTAGAGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGATCAGAACACAGCATTaGCTGGTTATGAAAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LKGFNKCEARAARGSLVVIRTQH*LVMKEN Trigger: GTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGAT...CACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR CCA 72 bp | ACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTaGTGGCTGGTGGGAATCAGAACACAGCATTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TNVKPGQQEEAS*WLVGIRTQHCL Trigger: CAGGCAATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR TCA 72 bp | GGCTGGTGGGAATCAGAACACAGCATTGCCTGGTTATaGAAGAAAACATCCGAATCTCTGCGCCACGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: GWWESEHSIAWL*KKTSESLRHAL Trigger: CAGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR GCA 72 bp | GCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATTaGCTGGTTATGAAAGAAAACATCCGAATCTCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: ASWWLVGIRTQH*LVMKENIRISA Trigger: CGCAGAGATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR TCA 72 bp | ACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTaGAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: TEKKRTKGFQQM*SQGSKRKPRGG Trigger: GCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCAATCAGAACACAGCATaGCCTGGTTATGAAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: KELKGFNKCEARAARGSLNQNTA*PGYERK Trigger: TTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATT...GAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCAATCAGAACACAGCATaGCCTGGTTATGAAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: CISIKFQTIFPSGAYGWINQNTA*PGYERK Trigger: TTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATT...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR TCA 90 bp | TATGAAAGAAAACATCCGAATCTCTGCGCCACGCGCTGTGGCTTCTGTGCCGCCGGCAGCGCTGACAGGTaGAGCAGGTCTCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YERKHPNLCATRCGFCAAGSADR*SRSRAS Trigger: GCTGGCACGAGACCTGCTTCACCTGTCAGCGCTGCC...GGCGGCACAGAAGCCACAGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATTGCAGTCGCAGCCGATaGGTGTTCCACACTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHCSRSR*VFHTPH Trigger: GTGAGGAGTGTGGAACACCCATCGGCTGCGACTGCA...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATCCACACCGGGAGCAATaGAAGCAGCCTTCATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHPHREQ*KQPSCQ Trigger: CTGGCATGAAGGCTGCTTCCATTGCTCCCGGTGTGG...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR TCA 90 bp | GAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGGCTGCTGGCAGCGCTaGCAGGTGAAGCAGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: ELKGFNKCEARAARGSLVGCWQR*QVKQVS Trigger: CGAGACCTGCTTCACCTGTCAGCGCTGCCAGCAGCC...CACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | AATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGACGTTGCCCAGATAGCTaGTTCTTGCAGGCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: NVKPGQQEEASWWLVGIRRCPDS*FLQAVH Trigger: GTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACG...TCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR TCA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCGGCAGCGCTGACAGGTaGAGCAGGTCTCGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CISIKFQTIFPSGAYGWIGSADR*SRSRAS Trigger: GCTGGCACGAGACCTGCTTCACCTGTCAGCGCTGCC...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TATGAAAGAAAACATCCGAATCTCTGCGCCACGCGCTGTGGCTTCTGTGCCGCCATAGGCTTTTTGCACTaGACGCACTGCAGGGCATAC | + |
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Preference number: 4 (lower is better) Translates to: YERKHPNLCATRCGFCAAIGFLH*THCRAY Trigger: GTATGCCCTGCAGTGCGTGCAGTGCAAAAAGCCTAT...GGCGGCACAGAAGCCACAGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATAGAGATTCATTGCAGTaGTGGCAGTCAAAGCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHRDSLQ*WQSKRS Trigger: TGAACGCTTTGACTGCCACCACTGCAATGAATCTCT...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATACTCCTCACAGGTATTaGCATAGAGTTCCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHTPHRY*HRVPQS Trigger: GCTTTGAGGAACTCTATGCCAATACCTGTGAGGAGT...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | CTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGTCTCGTGCCAGCTGCTaGCCTTGTATTCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LKGFNKCEARAARGSLVVSRASC*PCIPSC Trigger: GCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGA...CACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATTGCATTCCTGGCACTTaGACGAGTATTCATTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHCIPGT*TSIHWN Trigger: ATTCCAATGAATACTCGTCCAAGTGCCAGGAATGCA...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATGTTTTCTTGCATTCCTaGCACTTGGACGAGTATTCA | + |
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Preference number: 4 (lower is better) Translates to: PGQQEEASWWLVGIRTQHVFLHS*HLDEYS Trigger: TGAATACTCGTCCAAGTGCCAGGAATGCAAGAAAAC...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TATGAAAGAAAACATCCGAATCTCTGCGCCACGCGCTGTGGCTTCTGTGCCGCCTTAAAGCAGTCGTTGTaGCATTGGCGTTCCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: YERKHPNLCATRCGFCAALKQSL*HWRSSK Trigger: TTTCGAGGAACGCCAATGGCACAACGACTGCTTTAA...GGCGGCACAGAAGCCACAGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCGTGAAGCAGGTCTCGTaGCAGCTGCTGCCCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SIKFQTIFPSGAYGWILSVKQVS*QLLPLY Trigger: ATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCAC...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCCGTTGCCCAGATAGCTaGTTCTTGCAGGCTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SIKFQTIFPSGAYGWILSRCPDS*FLQAVH Trigger: GTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACG...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCGTGAAGCAGGTCTCGTaGCAGCTGCTGCCCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: FYKIPNHLPIRGLRMDLVVKQVS*QLLPLY Trigger: ATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCAC...GACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCCGTGCTGTGAAGCGTTaGCCAGATAGCTGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SIKFQTIFPSGAYGWILSRAVKR*PDSCFL Trigger: CAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACG...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCTGGAAACTCATCCCGTaGTGTGAAGCGTTGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SIKFQTIFPSGAYGWILSWKLIP*CEALPR Trigger: TCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCA...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | AAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCTGGAAACTCATCCCGTaGTGTGAAGCGTTGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: KELKGFNKCEARAARGSLWKLIP*CEALPR Trigger: TCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCA...GAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | ATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTGCAGTCGCAGCCGATaGGTGTTCCACACTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ISIKFQTIFPSGAYGWILCSRSR*VFHTPH Trigger: GTGAGGAGTGTGGAACACCCATCGGCTGCGACTGCA...CAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR TCA 90 bp | AAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCTGCGGGTACCTGGCATaGTGGTTTTCTTGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: KELKGFNKCEARAARGSLCGYLA*WFSCIP Trigger: AGGAATGCAAGAAAACCATCATGCCAGGTACCCGCA...GAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTCTCGTGCCAGCTGCTaGCCTTGTATTCCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CISIKFQTIFPSGAYGWISRASC*PCIPSC Trigger: GCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGA...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCAGGTCTCGTGCCAGCTaGTGCCCTTGTATTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: FYKIPNHLPIRGLRMDLVRSRAS*CPCIPS Trigger: AGATGGAATACAAGGGCAGCAGCTGGCACGAGACCT...GACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCGTGCTGTGAAGCGTTaGCCAGATAGCTGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: FYKIPNHLPIRGLRMDLVRAVKR*PDSCFL Trigger: CAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACG...GACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | GAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGTTAAAGCAGTCGTTGTaGCATTGGCGTTCCTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: ELKGFNKCEARAARGSLVLKQSL*HWRSSK Trigger: TTTCGAGGAACGCCAATGGCACAACGACTGCTTTAA...CACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR CCA 90 bp | AAAGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAAAATACATTCAAGTCCACACCGGGAGCAATaGAAGCAGCCTTCATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KGSHKAANPSSPLKIHSSPHREQ*KQPSCQ Trigger: CTGGCATGAAGGCTGCTTCCATTGCTCCCGGTGTGG...ACTTGAATGTATTTTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
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| CDS-3UTR TCA 90 bp | TTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCTGCGGGTACCTGGCATaGTGGTTTTCTTGCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: FYKIPNHLPIRGLRMDLVCGYLA*WFSCIP Trigger: AGGAATGCAAGAAAACCATCATGCCAGGTACCCGCA...GACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCCGTACAGAGATTCATTaGAGTGGTGGCAGTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SIKFQTIFPSGAYGWILSRTEIH*SGGSQS Trigger: GCTTTGACTGCCACCACTGCAATGAATCTCTGTACG...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | AAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCCGTACAGAGATTCATTaGAGTGGTGGCAGTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KELKGFNKCEARAARGSLRTEIH*SGGSQS Trigger: GCTTTGACTGCCACCACTGCAATGAATCTCTGTACG...GAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | GCTGGTGGGAATCAGAACACAGCATTGCCTGGTTATGAAAGAAAACATCCGAATCAGATAGCTGCTTCTTaGAGGCTGTGCACACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: AGGNQNTALPGYERKHPNQIAAS*RLCTQS Trigger: GCTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTG...ATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAAAATACATTCAAGTTCCAGATAGCTGCTTCTTaGAGGCTGTGCACACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSQSCKSQLSLENTFKFQIAAS*RLCTQS Trigger: GCTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTG...GAACTTGAATGTATTTTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
||
| CDS-3UTR CCA 90 bp | CCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAGATTCATTGCAGTGGTaGCAGTCAAAGCGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLRRKELKGFNKCEARAADSLQW*QSKRSV Trigger: GACTGAACGCTTTGACTGCCACCACTGCAATGAATC...TGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGGATTCATTGCAGTGGTaGCAGTCAAAGCGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISIKFQTIFPSGAYGWILDSLQW*QSKRSV Trigger: GACTGAACGCTTTGACTGCCACCACTGCAATGAATC...CAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAAGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAAAATACATTCATAGGCTTTTTGCACTaGACGCACTGCAGGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: IKRKSQSCKSQLSLENTFIGFLH*THCRAY Trigger: GTATGCCCTGCAGTGCGTGCAGTGCAAAAAGCCTAT...GAATGTATTTTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCTTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAAGAGATTCATTGCAGTaGTGGCAGTCAAAGCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRKELKGFNKCEARAARRDSLQ*WQSKRS Trigger: TGAACGCTTTGACTGCCACCACTGCAATGAATCTCT...TCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGATCTTGTCCCCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTTGCATTCCTGGCACTTaGACGAGTATTCATTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWILSPLRRKELKGFNKCCIPGT*TSIHWN Trigger: ATTCCAATGAATACTCGTCCAAGTGCCAGGAATGCA...ACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGGGGACAAGATCCATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATCACACAAAGCATTCCTaGTGCCAGGGCTGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGQQEEASWWLVGIRTQHHTKHS*CQGCSR Trigger: CCGGGAGCAGCCCTGGCACAAGGAATGCTTTGTGTG...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAACACAGCATAGCAGCTGTTCCTCCTaGGCAGCAAAGGGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGQQEEASWWLVGIRTQHSSCSS*AAKGLS Trigger: GGACAAGCCCTTTGCTGCCAAGGAGGAACAGCTGCT...ATGCTGTGTTCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGATTGGCAGCAAAGGGCTaGTCCACCAGCGAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVKPGQQEEASWWLVGIRLAAKG*STSELP Trigger: TGGAAGCTCGCTGGTGGACAAGCCCTTTGCTGCCAA...TCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TATGAAAGAAAACATCCGAATCTCTGCGCCACGCGCTGTGGCTTCTGTGCCGCCTTGGCAGCAAAGGGCTaGTCCACCAGCGAGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YERKHPNLCATRCGFCAALAAKG*STSELP Trigger: TGGAAGCTCGCTGGTGGACAAGCCCTTTGCTGCCAA...GGCGGCACAGAAGCCACAGCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 90 bp | CAGTATGGAAACTCATCCCGTGCTGTGAAGCGTTGCCCAGATAGCTaGTTCTTGCAGGCTGTGCACACAAAGCATTCCTTGTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QYGNSSRAVKRCPDS*FLQAVHTKHSLCQG Trigger: GCCCTGGCACAAGGAATGCTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CCA 90 bp | GCCAGTGCCGATCCTTGTAGGACAAGTCCTTGCAGTCGCAGCCGATaGGTGTTCCACACTCCTCACAGGTATTGGCATAGAGTTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASADPCRTSPCSRSR*VFHTPHRYWHRVPQ Trigger: TTGAGGAACTCTATGCCAATACCTGTGAGGAGTGTGGAACACCCATCGGCTGCGACTGCAAGGACTTGTCCTACAAGGATCGGCACTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGAGGCATGATGGTTTTCTaGCATTCCTGGCACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NVKPGQQEEASWWLVGIRGMMVF*HSWHLD Trigger: GTCCAAGTGCCAGGAATGCAAGAAAACCATCATGCC...TCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCGTGGTGGCTGGTGGGAATCAGATTAGGTATGAAGCTCTaGGTTCCAATGGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NVKPGQQEEASWWLVGIRLGMKL*VPMGCW Trigger: CCAGCAGCCCATTGGAACCAAGAGCTTCATACCTAA...TCTGATTCCCACCAGCCACCACGAGGCTTCCTCTTGCTGCCCTGGCTTCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS TCA 90 bp | AGTCACAGAAGCAGGTCAGGCAGTATGGAAACTCATCCCGTGCTGTaGAGCGTTGCCCAGATAGCTGCTTCTTGCAGGCTGTGCACACAA | + |
|
Preference number: 5 (lower is better) Translates to: SHRSRSGSMETHPVL*SVAQIAASCRLCTQ Trigger: TTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCTGACCTGCTTCTGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 90 bp | AAGCAGGTCAGGCAGTATGGAAACTCATCCCGTGCTGTGAAGCGTTaGCCAGATAGCTGCTTCTTGCAGGCTGTGCACACAAAGCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQVRQYGNSSRAVKR*PDSCFLQAVHTKHS Trigger: GGAATGCTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCTGACCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 90 bp | CCCACCAGAGACAGGGAGCACTTCTTACAGTTAAAGCAGTCGTTGTaGCATTGGCGTTCCTCGAAAGAGATGTACTTTGTGCCACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTRDREHFLQLKQSL*HWRSSKEMYFVPPR Trigger: TCTGGGTGGCACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCCCTGTCTCTGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 90 bp | AGCAGGCCACACAGTGTGGGTTCTCCTCCTTTAGAATGTACTTCTTaGCGTACAGAGATTCATTGCAGTGGTGGCAGTCAAAGCGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRPHSVGSPPLECTS*RTEIHCSGGSQSVQ Trigger: CTGAACGCTTTGACTGCCACCACTGCAATGAATCTCTGTACGGCAAGAAGTACATTCTAAAGGAGGAGAACCCACACTGTGTGGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCTGCCAGCTGCTGCCCTaGTATTCCATCTTGCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SIKFQTIFPSGAYGWILSCQLLP*YSILRV Trigger: TACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCA...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGCACACAAAGCATTCCTaGTGCCAGGGCTGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ISIKFQTIFPSGAYGWILHTKHS*CQGCSR Trigger: CCGGGAGCAGCCCTGGCACAAGGAATGCTTTGTGTG...CAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CCA 90 bp | AGAGACAGGGAGCACTTCTTACAGTTAAAGCAGTCGTTGTGCCATTaGCGTTCCTCGAAAGAGATGTACTTTGTGCCACCCAGACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: RDREHFLQLKQSLCH*RSSKEMYFVPPRPL Trigger: TAGTGGTCTGGGTGGCACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCCCTGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTGCCAGCTGCTGCCCTaGTATTCCATCTTGCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CISIKFQTIFPSGAYGWICQLLP*YSILRV Trigger: TACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCA...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCCCAGATAGCTGCTTCTaGCAGGCTGTGCACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SIKFQTIFPSGAYGWILSPDSCF*QAVHTK Trigger: CTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGG...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGTCCAGACCACTAATGGGGTaGGTGCACCCAGCACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIKFQTIFPSGAYGWILSRPLMG*VHPAHF Trigger: GAAATGTGCTGGGTGCACCAACCCCATTAGTGGTCT...GGACAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGAGGAAGCCTCAGACCACTAATGGGGTaGGTGCACCCAGCACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KELKGFNKCEARAARGSLRPLMG*VHPAHF Trigger: GAAATGTGCTGGGTGCACCAACCCCATTAGTGGTCT...GAGGCTTCCTCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCCCAGATAGCTGCTTCTaGCAGGCTGTGCACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CISIKFQTIFPSGAYGWIPDSCF*QAVHTK Trigger: CTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGG...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAAAATACATTCAAGTTCCCCTTGTATTCCATCTaGCGGGTACCTGGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKSQSCKSQLSLENTFKFPLYSI*RVPGMM Trigger: CATCATGCCAGGTACCCGCAAGATGGAATACAAGGG...GAACTTGAATGTATTTTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
||
| CDS-3UTR CAA 90 bp | ATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGCCGTACAGAGATTCATaGCAGTGGTGGCAGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISIKFQTIFPSGAYGWILPYRDS*QWWQSK Trigger: CTTTGACTGCCACCACTGCAATGAATCTCTGTACGG...CAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTGAAGCCAGGGCAGCAAGACCGTACAGAGATTCATaGCAGTGGTGGCAGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRRKELKGFNKCEARAARPYRDS*QWWQSK Trigger: CTTTGACTGCCACCACTGCAATGAATCTCTGTACGG...TCTTGCTGCCCTGGCTTCACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGGGCATGATGGTTTTCTaGCATTCCTGGCACTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISIKFQTIFPSGAYGWILGMMVF*HSWHLD Trigger: GTCCAAGTGCCAGGAATGCAAGAAAACCATCATGCC...CAAGATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | GGATGGATCTTGTCCCCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTCCCTTGTATTCCATCTaGCGGGTACCTGGCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GWILSPLRRKELKGFNKCPLYSI*RVPGMM Trigger: CATCATGCCAGGTACCCGCAAGATGGAATACAAGGG...ACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGGGGACAAGATCCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTACATAAAAAGGAAGTCACAAAGCTGCAAATCCCAGCTCTCCCTTGAACAGTTAAAGCAGTCGTaGTGCCATTGGCGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFYIKRKSQSCKSQLSLEQLKQS*CHWRSS Trigger: CGAGGAACGCCAATGGCACAACGACTGCTTTAACTG...TTCAAGGGAGAGCTGGGATTTGCAGCTTTGTGACTTCCTTTTTATGTAAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000008280.14 |
||
| CDS-3UTR CAA 90 bp | GGATGGATCTTGTCCCCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTCAGTTAAAGCAGTCGTaGTGCCATTGGCGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GWILSPLRRKELKGFNKCQLKQS*CHWRSS Trigger: CGAGGAACGCCAATGGCACAACGACTGCTTTAACTG...ACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGGGGACAAGATCCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGGGAATCAGAACACAGCATTGCCTGGTTATGAAAGAAAACATCCGAATTTGCATTCCTGGCACTaGGACGAGTATTCATTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGGNQNTALPGYERKHPNLHSWH*DEYSLE Trigger: TTCCAATGAATACTCGTCCAAGTGCCAGGAATGCAA...ATTCGGATGTTTTCTTTCATAACCAGGCAATGCTGTGTTCTGATTCCCACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | TGCATTTCTATAAAATTCCAAACCATCTTCCCATCCGGGGCTTACGGATGGATCTTGCATTCCTGGCACTaGGACGAGTATTCATTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CISIKFQTIFPSGAYGWILHSWH*DEYSLE Trigger: TTCCAATGAATACTCGTCCAAGTGCCAGGAATGCAA...GATCCATCCGTAAGCCCCGGATGGGAAGATGGTTTGGAATTTTATAGAAATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS-3UTR CAA 90 bp | GGATGGATCTTGTCCCCACTGAGAAGAAAAGAACTAAAGGGTTTCAACAAATGTTTAGGTATGAAGCTCTaGGTTCCAATGGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWILSPLRRKELKGFNKCLGMKL*VPMGCW Trigger: CCAGCAGCCCATTGGAACCAAGAGCTTCATACCTAA...ACATTTGTTGAAACCCTTTAGTTCTTTTCTTCTCAGTGGGGACAAGATCCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS TCA 72 bp | TCTTGGTTCCAATGGGCTGCTGGCAGCGCTGACAGGTaGAGCAGGTCTCGTGCCAGCTGCTGCCCTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: SWFQWAAGSADR*SRSRASCCPCI Trigger: AATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCTGTCAGCGCTGCCAGCAGCCCATTGGAACCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS TCA 72 bp | AGCAGGTCAGGCAGTATGGAAACTCATCCCGTGCTGTaGAGCGTTGCCCAGATAGCTGCTTCTTGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSGSMETHPVL*SVAQIAASCRL Trigger: CAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCTGACCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 72 bp | AGGCAGTATGGAAACTCATCCCGTGCTGTGAAGCGTTaGCCAGATAGCTGCTTCTTGCAGGCTGTGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: RQYGNSSRAVKR*PDSCFLQAVHT Trigger: TGTGTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS GCA 72 bp | AACTCATCCCGTGCTGTGAAGCGTTGCCCAGATAGCTaGTTCTTGCAGGCTGTGCACACAAAGCATTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSRAVKRCPDS*FLQAVHTKHSL Trigger: CAAGGAATGCTTTGTGTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CCA 72 bp | GATCCTTGTAGGACAAGTCCTTGCAGTCGCAGCCGATaGGTGTTCCACACTCCTCACAGGTATTGGCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: DPCRTSPCSRSR*VFHTPHRYWHR Trigger: TCTATGCCAATACCTGTGAGGAGTGTGGAACACCCATCGGCTGCGACTGCAAGGACTTGTCCTACAAGGATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CCA 72 bp | CTTAGCGTACAAGTCACAGAAGCAGGTCAGGCAGTATaGAAACTCATCCCGTGCTGTGAAGCGTTGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSVQVTEAGQAV*KLIPCCEALPR Trigger: TCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCTGACCTGCTTCTGTGACTTGTACGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CAA 90 bp | CAGAGACAGGGAGCACTTCTTACAGTTAAAGCAGTCGTTGTGCCATaGGCGTTCCTCGAAAGAGATGTACTTTGTGCCACCCAGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: QRQGALLTVKAVVVP*AFLERDVLCATQTT Trigger: AGTGGTCTGGGTGGCACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCCCTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
||
| CDS CAA 72 bp | GAGATGTACTTTGTGCCACCCAGACCACTAATGGGGTaGGTGCACCCAGCACATTTCTTAGCGTACAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EMYFVPPRPLMG*VHPAHFLAYKS Trigger: TGACTTGTACGCTAAGAAATGTGCTGGGTGCACCAACCCCATTAGTGGTCTGGGTGGCACAAAGTACATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS CAA 90 bp | AAGCAGGCCACACAGTGTGGGTTCTCCTCCTTTAGAATGTACTTCTaGCCGTACAGAGATTCATTGCAGTGGTGGCAGTCAAAGCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: KQATQCGFSSFRMYF*PYRDSLQWWQSKRS Trigger: TGAACGCTTTGACTGCCACCACTGCAATGAATCTCTGTACGGCAAGAAGTACATTCTAAAGGAGGAGAACCCACACTGTGTGGCCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS CCA 72 bp | GAGCACTTCTTACAGTTAAAGCAGTCGTTGTGCCATTaGCGTTCCTCGAAAGAGATGTACTTTGTGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: EHFLQLKQSLCH*RSSKEMYFVPP Trigger: GGGTGGCACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS CAA 72 bp | GGAGCACTTCTTACAGTTAAAGCAGTCGTTGTGCCATaGGCGTTCCTCGAAAGAGATGTACTTTGTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: GALLTVKAVVVP*AFLERDVLCAT Trigger: GGTGGCACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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| CDS GCA 72 bp | GACAGGGAGCACTTCTTACAGTTAAAGCAGTCGTTGTaGCATTGGCGTTCCTCGAAAGAGATGTACTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: DREHFLQLKQSL*HWRSSKEMYFV Trigger: CACAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008280.14 ENSMUST00000185893.2 |
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