Pregenerated sensors for FH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026526Ensembl transcript IDs: ENSMUST00000027810.14, ENSMUST00000154956.3, ENSMUST00000176740.2
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGGAACCCCAGTaGAGCGATAAGAGACACCAACCCACCCACAAAACTTTCAACCCA | + |
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Preference number: 1 (lower is better) Translates to: WNLKKPPPVSREEPQ*SDKRHQPTHKTFNP Trigger: TGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGGTTCCTCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 90 bp | TCCACCCAGCAGCTAACTCAGACAGAGACACCCATAGCCAAACAGTaGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: STQQLTQTETPIAKQ*TELGNSYGRKGGKI Trigger: AATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTGGCTATGGGTGTCTCTGTCTGAGTTAGCTGCTGGGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 90 bp | TTCAGCTACCTCATCTGCGGCCTTCATTATTGCACTAGCAATCTTTaGATCGAGACCATACTCCTGGTTTACTTCAGCAGCAGCTCGCTT | + |
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Preference number: 1 (lower is better) Translates to: FSYLICGLHYCTSNL*IETILLVYFSSSSL Trigger: AAGCGAGCTGCTGCTGAAGTAAACCAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAATAATGAAGGCCGCAGATGAGGTAGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR TCA 90 bp | TTTGTCTGGGTTCCTGATCCAGTCTGCCAAACCACCAGAGGAAAGTaGTCATTTAATTTACCTTCAGCTACCTCATCTGCGGCCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: FVWVPDPVCQTTRGK*SFNLPSATSSAAFI Trigger: AATGAAGGCCGCAGATGAGGTAGCTGAAGGTAAATTAAATGATCACTTTCCTCTGGTGGTTTGGCAGACTGGATCAGGAACCCAGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR CCA 90 bp | GTTCATCGTAGATCTTACGGTCTGAGCACCATAATACTTATCGGTTaGAACCTTCAATTCACCAAAGGTGTCGAACTCTACACGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: VHRRSYGLSTIILIG*NLQFTKGVELYTEG Trigger: TCCTTCCGTGTAGAGTTCGACACCTTTGGTGAATTGAAGGTTCCAACCGATAAGTATTATGGTGCTCAGACCGTAAGATCTACGATGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR CAA 90 bp | CTCCTGGTTTACTTCAGCAGCAGCTCGCTTCAAGATGCCGAAAGCTaGAATGACTGGGATTGGCATACGTTCCGTAGCACCTCCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: LLVYFSSSSLQDAES*NDWDWHTFRSTSNL Trigger: AAGATTGGAGGTGCTACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTCGGCATCTTGAAGCGAGCTGCTGCTGAAGTAAACCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTGGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATTGTCTAGCCTCGCAGACTTaGAGTGTCAGGGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QTVDRAWELLWKKRRKDCLASQT*SVRVGR Trigger: CCTCCCCACCCTGACACTTCAAGTCTGCGAGGCTAG...ACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR-3UTR CCA 90 bp | TTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGATATGTTCTTCTAGCTaGGCCTTCTTGTCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: FTPLGIWNLKKPPPVSREICSSS*AFLSGL Trigger: AAGGCCAGACAAGAAGGCCCAGCTAGAAGAACATAT...CTCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR-3UTR CCA 90 bp | TCTGCGGCCTTCATTATTGCACTAGCAATCTTTGGATCGAGACCATACTCCTGGGAAAGCTTGAATGACTaGGATTGGCATACGTTCCGT | + |
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Preference number: 2 (lower is better) Translates to: SAAFIIALAIFGSRPYSWESLND*DWHTFR Trigger: ACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTC...CCAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAATAATGAAGGCCGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR-3UTR GCA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGATATCCCAAAAGCTGTTaGCTGTGTGTGGGATATGTT | + |
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Preference number: 2 (lower is better) Translates to: IHTIGDMEPEEATSCIQRYPKSC*LCVGYV Trigger: AACATATCCCACACACAGGCAACAGCTTTTGGGATA...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR-3UTR CCA 90 bp | GCCGAAAGCTTGAATGACTGGGATTGGCATACGTTCCGTAGCACCTCCAATCTTACACGGAAGGAATTTTaGTTCCCAATGGAATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: AESLNDWDWHTFRSTSNLTRKEF*FPMEFN Trigger: ATTAAATTCCATTGGGAACCAAAATTCCTTCCGTGT...AAGATTGGAGGTGCTACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGCTCTGTTGCTAATGACTTCATTTACATTCATGTTTGTCTGGGTTCCTGATTGCACTAGCAATCTTTaGATCGAGACCATACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: IALLLMTSFTFMFVWVPDCTSNL*IETILL Trigger: CAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCA...ATCAGGAACCCAGACAAACATGAATGTAAATGAAGTCATTAGCAACAGAGCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR-3UTR CAA 90 bp | TTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGCCTAGCCTCGCAGACTaGAAGTGTCAGGGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: FTPLGIWNLKKPPPVSREPSLAD*KCQGGE Trigger: CTCCCCACCCTGACACTTCAAGTCTGCGAGGCTAGG...CTCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 72 bp | AAGAAGCCACCTCCTGTATCCAGAGAGGAACCCCAGTaGAGCGATAAGAGACACCAACCCACCCACAAAACT | + |
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Preference number: 3 (lower is better) Translates to: KKPPPVSREEPQ*SDKRHQPTHKT Trigger: AGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGGTTCCTCTCTGGATACAGGAGGTGGCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR-3UTR CAA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGATCTAGCTGGGCCTTCTaGTCTGGCCTTCGTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: IHTIGDMEPEEATSCIQRSSWAF*SGLRGR Trigger: TCTCCCACGAAGGCCAGACAAGAAGGCCCAGCTAGA...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR TCA 72 bp | ACTTCAGCAGCAGCTCGCTTCAAGATGCCGAAAGCTTaGATGACTGGGATTGGCATACGTTCCGTAGCACCT | + |
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Preference number: 3 (lower is better) Translates to: TSAAARFKMPKA*MTGIGIRSVAP Trigger: AGGTGCTACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTCGGCATCTTGAAGCGAGCTGCTGCTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR CCA 72 bp | ATTGCACTAGCAATCTTTGGATCGAGACCATACTCCTaGTTTACTTCAGCAGCAGCTCGCTTCAAGATGCCG | + |
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Preference number: 3 (lower is better) Translates to: IALAIFGSRPYS*FTSAAARFKMP Trigger: CGGCATCTTGAAGCGAGCTGCTGCTGAAGTAAACCAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR-3UTR CAA 90 bp | TGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTGGCTATCCCAAAAGCTGTaGCCTGTGTGTGGGATATGT | + |
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Preference number: 3 (lower is better) Translates to: WTLGTLRIQTNKRTYTGWLSQKL*PVCGIC Trigger: ACATATCCCACACACAGGCAACAGCTTTTGGGATAG...CCAGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 72 bp | GGAACTCCACAGGAAGACCAACAGAGTCAACTAACCTaGACTCTTGGGACTCTCAGAATCCAAACCAACAAA | + |
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Preference number: 3 (lower is better) Translates to: GTPQEDQQSQLT*TLGTLRIQTNK Trigger: TTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCAGGTTAGTTGACTCTGTTGGTCTTCCTGTGGAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 72 bp | CTCATCTGCGGCCTTCATTATTGCACTAGCAATCTTTaGATCGAGACCATACTCCTGGTTTACTTCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LICGLHYCTSNL*IETILLVYFSS Trigger: GCTGCTGAAGTAAACCAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAATAATGAAGGCCGCAGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR GCA 72 bp | TTTACCTTCAGCTACCTCATCTGCGGCCTTCATTATTaGACTAGCAATCTTTGGATCGAGACCATACTCCTG | + |
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Preference number: 3 (lower is better) Translates to: FTFSYLICGLHY*TSNLWIETILL Trigger: CAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCAATAATGAAGGCCGCAGATGAGGTAGCTGAAGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR CCA 72 bp | CATAGCCAAACAGTGGACAGAGCTTGGGAACTCTTATaGAAGAAAAGGAGGAAAGATTGTAAGCCTCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: HSQTVDRAWELL*KKRRKDCKPQR Trigger: CCTTTGAGGCTTACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTGGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CCA 72 bp | CTGTTGCTAATGACTTCATTTACATTCATGTTTGTCTaGGTTCCTGATCCAGTCTGCCAAACCACCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLLMTSFTFMFV*VPDPVCQTTRG Trigger: TCCTCTGGTGGTTTGGCAGACTGGATCAGGAACCCAGACAAACATGAATGTAAATGAAGTCATTAGCAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| 3UTR CCA 72 bp | AGATCTTACGGTCTGAGCACCATAATACTTATCGGTTaGAACCTTCAATTCACCAAAGGTGTCGAACTCTAC | + |
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Preference number: 3 (lower is better) Translates to: RSYGLSTIILIG*NLQFTKGVELY Trigger: GTAGAGTTCGACACCTTTGGTGAATTGAAGGTTCCAACCGATAAGTATTATGGTGCTCAGACCGTAAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| CDS-3UTR GCA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGACCGTCCCCACAGCAGTaGCTCCAGCAGCGAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: IHTIGDMEPEEATSCIQRPSPQQ*LQQRAR Trigger: ACGAGCTCGCTGCTGGAGGCACTGCTGTGGGGACGG...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | AGAAGCCACCTCCTGTATCCAGAGAGGAACCCCAGTGGAGCGATAAGAGACACCGAAGGAATTTTGGCTTaGCATTCGCGCGACGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: RSHLLYPERNPSGAIRDTEGILA*HSRDVR Trigger: CCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTC...GGTGTCTCTTATCGCTCCACTGGGGTTCCTCTCTGGATACAGGAGGTGGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCCACCTCCTGTATCCAGAGAGGAACCCCAGTGGAGCGATAAGAGACACCTCGAGACCATACTCCTaGTTTACTTCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RSHLLYPERNPSGAIRDTSRPYS*FTSAAA Trigger: AGCTGCTGCTGAAGTAAACCAGGAGTATGGTCTCGA...GGTGTCTCTTATCGCTCCACTGGGGTTCCTCTCTGGATACAGGAGGTGGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | CCCCAGTGGAGCGATAAGAGACACCAACCCACCCACAAAACTTTCAACCCAAAAGCACTGAGAGCATCATaGAGCTTCTGTAACCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PQWSDKRHQPTHKTFNPKALRAS*SFCNPG Trigger: GCCAGGGTTACAGAAGCTCCATGATGCTCTCAGTGC...TTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| 3UTR CAA 72 bp | TACTTCAGCAGCAGCTCGCTTCAAGATGCCGAAAGCTaGAATGACTGGGATTGGCATACGTTCCGTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: YFSSSSLQDAES*NDWDWHTFRST Trigger: GGTGCTACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTCGGCATCTTGAAGCGAGCTGCTGCTGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| CDS-3UTR GCA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGGTGCACAGGCTTCTTaGTGCCAAGTTCACCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: IHTIGDMEPEEATSCIQRGAQAS*CQVHLL Trigger: TAGGAGGTGAACTTGGCAGCAAGAAGCCTGTGCACC...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | TTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGCAAACCTGTGAGTGCTaGTACTTTTGCGGCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: FTPLGIWNLKKPPPVSREQTCEC*YFCGHL Trigger: AAGGTGGCCGCAAAAGTAGCAGCACTCACAGGTTTG...CTCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | GTGAGGGAATGGCTAACCAGTAACCAGCCCAACTTGAGATCGATCCCATGGGCTTGCACTAGCAATCTTTaGATCGAGACCATACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VREWLTSNQPNLRSIPWACTSNL*IETILL Trigger: CAGGAGTATGGTCTCGATCCAAAGATTGCTAGTGCA...AGCCCATGGGATCGATCTCAAGTTGGGCTGGTTACTGGTTAGCCATTCCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR TCA 90 bp | CCTGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTGTTTGTCTGGGTTCCTaGTCCAGTCTGCCAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: PGLLGLSESKPTKEHTQAVCLGS*SSLPNH Trigger: GTGGTTTGGCAGACTGGATCAGGAACCCAGACAAAC...AGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | GTGAGGGAATGGCTAACCAGTAACCAGCCCAACTTGAGATCGATCCCATGGGCTTGCGGCCTTCATTATTaGACTAGCAATCTTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: VREWLTSNQPNLRSIPWACGLHY*TSNLWI Trigger: GATCCAAAGATTGCTAGTGCAATAATGAAGGCCGCA...AGCCCATGGGATCGATCTCAAGTTGGGCTGGTTACTGGTTAGCCATTCCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGAGTGCTGCTACTTTTaGGGCCACCTTTTCTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: IHTIGDMEPEEATSCIQRECCYF*GHLFCE Trigger: TTCGCAGAAAAGGTGGCCGCAAAAGTAGCAGCACTC...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGAGGCAAACCTGTGAGTaGTGCTACTTTTGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTERQTCE*CYFCGH Trigger: GTGGCCGCAAAAGTAGCAGCACTCACAGGTTTGCCT...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR TCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGACAGCATCCTGCGTGTaGGTTCGCCCAATTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTETASCV*VRPILM Trigger: CATCAAAATTGGGCGAACTCACACGCAGGATGCTGT...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR TCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGCAAAAGGCAAACCTGTaGGTGCTGCTACTTTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTEQKANL*VLLLLR Trigger: CCGCAAAAGTAGCAGCACTCACAGGTTTGCCTTTTG...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | TGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTGGGCACAGGCTTCTTGCTaGCAAGTTCACCTCCTAACA | + |
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Preference number: 4 (lower is better) Translates to: WTLGTLRIQTNKRTYTGWAQASC*QVHLLT Trigger: TGTTAGGAGGTGAACTTGGCAGCAAGAAGCCTGTGC...CCAGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | TTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAGGAAAGCTTGAATGACTaGGATTGGCATACGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: FTPLGIWNLKKPPPVSREESLND*DWHTFR Trigger: ACGGAACGTATGCCAATCCCAGTCATTCAAGCTTTC...CTCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGCATGATGCTGCTCCCTaGCTCGTTTTCAGGCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTEHDAAP*LVFRQD Trigger: ATCTTGCCTGAAAACGAGCCAGGGAGCAGCATCATG...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | CCTGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTACTGCAGCAGCAATATaGATTGCTGTGGGAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PGLLGLSESKPTKEHTQATAAAI*IAVGKV Trigger: CACCTTTCCCACAGCAATGCATATTGCTGCTGCAGT...AGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGACTTGTGAACTTCCACTaGAGCAGCAATATGCATTGC | + |
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Preference number: 4 (lower is better) Translates to: IHTIGDMEPEEATSCIQRLVNFH*SSNMHC Trigger: GCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAG...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | AGACACCAACCCACCCACAAAACTTTCAACCCAAAATTTAACCTGTCTATAGGAAGGGTTCACCTTTCCTaGCATGATGCTGCTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RHQPTHKTFNPKFNLSIGRVHLS*HDAAPW Trigger: CCAGGGAGCAGCATCATGCCAGGAAAGGTGAACCCT...TCCTATAGACAGGTTAAATTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | CTAACCTGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGTTCCTGATCCAGTCTaGCAAACCACCAGAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LTWTLGTLRIQTNKRTYTVPDPV*QTTRGK Trigger: CTTTCCTCTGGTGGTTTGGCAGACTGGATCAGGAAC...TGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCAGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGCGTAGATTCTTGGCATaGCGGCTTTTATTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTERRFLA*RLLFSP Trigger: TGGTGAGAATAAAAGCCGCCATGCCAAGAATCTACG...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | AACCCAAAATTTAACCTGTCTATAGGAAATGCAGGCACGCAGGAGGGAACAGAGGGTCTTGGCAATCTTTaGTGCTTTGTCATACCCTAT | + |
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Preference number: 4 (lower is better) Translates to: NPKFNLSIGNAGTQEGTEGLGNL*CFVIPY Trigger: ATAGGGTATGACAAAGCAGCAAAGATTGCCAAGACC...CTCTGTTCCCTCCTGCGTGCCTGCATTTCCTATAGACAGGTTAAATTTTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR TCA 90 bp | CAAACAGTGGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATTGTCTTTGGATTTTGCACTaGGAGCATCATGGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVDRAWELLWKKRRKDCLWILH*EHHGAS Trigger: AGAAGCTCCATGATGCTCTCAGTGCAAAATCCAAAG...ACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | CAAACAGTGGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATTGTCAATATGCATTGCTGTaGGAAAGGTGTCATTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTVDRAWELLWKKRRKDCQYALL*ERCHSS Trigger: GCTCGAATGACACCTTTCCCACAGCAATGCATATTG...ACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | CAAACAGTGGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATTGTGAGCTCGTAGATTCTTaGCATGGCGGCTTTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTVDRAWELLWKKRRKDCELVDS*HGGFYS Trigger: AGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTC...ACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR GCA 90 bp | CAAACAGTGGACAGAGCTTGGGAACTCTTATGGAAGAAAAGGAGGAAAGATTGTCCAATTTTGATGACCTaGGCAAACTCTTTGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: QTVDRAWELLWKKRRKDCPILMT*ANSLDF Trigger: AAAATCCAAAGAGTTTGCGCAGGTCATCAAAATTGG...ACAATCTTTCCTCCTTTTCTTCCATAAGAGTTCCCAAGCTCTGTCCACTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CCA 90 bp | AGACACCAACCCACCCACAAAACTTTCAACCCAAAATTTAACCTGTCTATAGGAGTCATACCCTATATGTaGATTAAGAGCTGTGACCAA | + |
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Preference number: 4 (lower is better) Translates to: RHQPTHKTFNPKFNLSIGVIPYM*IKSCDQ Trigger: TTGGTCACAGCTCTTAATCCACATATAGGGTATGAC...TCCTATAGACAGGTTAAATTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 90 bp | GACGTTCGGAGCACACCGCGGGAGGGTGGTCGCTTCCCCAGACACTaGAGCACCGGCGGACGGAACCCGCAGGAGGCGACGCGAGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DVRSTPREGGRFPRH*STGGRNPQEATRAR Trigger: GCGCGCTCGCGTCGCCTCCTGCGGGTTCCGTCCGCCGGTGCTGCAGTGTCTGGGGAAGCGACCACCCTCCCGCGGTGTGCTCCGAACGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027810.14 ENSMUST00000154956.3 |
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| CDS GCA 90 bp | CAATTCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTTGGCTTaGCATTCGCGCGACGTTCGGAGCACACCGCGGGAGGGTGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QFTKGVELYTEGILA*HSRDVRSTPREGGR Trigger: GCGACCACCCTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CCA 90 bp | ACCTTCAATTCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTTaGCTTGCCATTCGCGCGACGTTCGGAGCACACCGCGGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFNSPKVSNSTRKEF*LAIRATFGAHRGRV Trigger: CACCCTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGAATTGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CCA 90 bp | TCCCCACAGCAGTGCCTCCAGCAGCGAGCTCGTAGATTCTTGGCATaGCGGCTTTTATTCTCACCATCGCATACTGGACTTGCTGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: SPQQCLQQRARRFLA*RLLFSPSHTGLAER Trigger: ACGTTCAGCAAGTCCAGTATGCGATGGTGAGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTGCTGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS TCA 90 bp | CTGAGAGCATCATGGAGCTTCTGTAACCCTGGCAACAGGACCTTGTaGACTTCCACTGCAGCAGCAATATGCATTGCTGTGGGAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRASWSFCNPGNRTL*TSTAAAICIAVGKV Trigger: CACCTTTCCCACAGCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAGGTCCTGTTGCCAGGGTTACAGAAGCTCCATGATGCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | TGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTGGGGGTGCACAGGCTTCTaGCTGCCAAGTTCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WTLGTLRIQTNKRTYTGWGCTGF*LPSSPP Trigger: AGGAGGTGAACTTGGCAGCAAGAAGCCTGTGCACCC...CCAGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGGAGCGATAAGAGACACCAACCCACCCACAAAACTTTCAACCCAAAACAGCAGCAATATGCATaGCTGTGGGAAAGGTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQWSDKRHQPTHKTFNPKQQQYA*LWERCH Trigger: ATGACACCTTTCCCACAGCAATGCATATTGCTGCTG...TTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS TCA 90 bp | CCACTGAATTCCTGTCCAAGAGTAAGAGGGACAGCATCCTGCGTGTaGGTTCGCCCAATTTTGATGACCTGCGCAAACTCTTTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLNSCPRVRGTASCV*VRPILMTCANSLDF Trigger: AAAATCCAAAGAGTTTGCGCAGGTCATCAAAATTGGGCGAACTCACACGCAGGATGCTGTCCCTCTTACTCTTGGACAGGAATTCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 90 bp | TGGCAACAGGACCTTGTGAACTTCCACTGCAGCAGCAATATGCATTaGTGTGGGAAAGGTGTCATTCGAGCTCTGGCTTTTGTTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: WQQDLVNFHCSSNMH*CGKGVIRALAFVNM Trigger: CATGTTAACAAAAGCCAGAGCTCGAATGACACCTTTCCCACAGCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAGGTCCTGTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | ATTCACACCATTGGGGATATGGAACCTGAAGAAGCCACCTCCTGTATCCAGAGAACCTGCGCAAACTCTTaGGATTTTGCACTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHTIGDMEPEEATSCIQRTCANS*DFALRA Trigger: TGCTCTCAGTGCAAAATCCAAAGAGTTTGCGCAGGT...TCTCTGGATACAGGAGGTGGCTTCTTCAGGTTCCATATCCCCAATGGTGTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | CCTGGACTCTTGGGACTCTCAGAATCCAAACCAACAAAAGAACATACACAGGCTATCCCGACCACACAGTaGTCTGTGAAGGACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGLLGLSESKPTKEHTQAIPTTQ*SVKDTE Trigger: TTCAGTGTCCTTCACAGACAACTGTGTGGTCGGGAT...AGCCTGTGTATGTTCTTTTGTTGGTTTGGATTCTGAGAGTCCCAAGAGTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGGAGCGATAAGAGACACCAACCCACCCACAAAACTTTCAACCCAAAACATTTACATTCATGTTaGTCTGGGTTCCTGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQWSDKRHQPTHKTFNPKHLHSC*SGFLIQ Trigger: CTGGATCAGGAACCCAGACAAACATGAATGTAAATG...TTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS-3UTR CAA 90 bp | TACTTATCGGTTGGAACCTTCAATTCACCAAAGGTGTCGAACTCTACACGGAAGTTAATGGCTGAGCTCTaGCCCAGCACACTGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: YLSVGTFNSPKVSNSTRKLMAEL*PSTLET Trigger: AGTTTCCAGTGTGCTGGGCAAGAGCTCAGCCATTAA...CTTCCGTGTAGAGTTCGACACCTTTGGTGAATTGAAGGTTCCAACCGATAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154956.3 |
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| CDS-3UTR CAA 90 bp | CCCCAGTGGAGCGATAAGAGACACCAACCCACCCACAAAACTTTCAACCCAAAACATAATACTTATCGGTaGGAACCTTCAATTCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: PQWSDKRHQPTHKTFNPKHNTYR*EPSIHQ Trigger: TTGGTGAATTGAAGGTTCCAACCGATAAGTATTATG...TTTTGGGTTGAAAGTTTTGTGGGTGGGTTGGTGTCTCTTATCGCTCCACTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 72 bp | AACCGATCCTGGTGTTTAACCCCGTCCCCACAGCAGTaGCTCCAGCAGCGAGCTCGTAGATTCTTGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: NRSWCLTPSPQQ*LQQRARRFLAW Trigger: CCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTGCTGTGGGGACGGGGTTAAACACCAGGATCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 90 bp | TCAATTCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTTGGCTaGCCATTCGCGCGACGTTCGGAGCACACCGCGGGAGGGTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SIHQRCRTLHGRNFG*PFARRSEHTAGGWS Trigger: CGACCACCCTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGAATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 72 bp | AAAGGTGTCGAACTCTACACGGAAGGAATTTTGGCTTaGCATTCGCGCGACGTTCGGAGCACACCGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KGVELYTEGILA*HSRDVRSTPRE Trigger: CTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 72 bp | CAAAGGTGTCGAACTCTACACGGAAGGAATTTTGGCTaGCCATTCGCGCGACGTTCGGAGCACACCGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QRCRTLHGRNFG*PFARRSEHTAG Trigger: TCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CCA 72 bp | TCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTTaGCTTGCCATTCGCGCGACGTTCGGAGCACACCGC | + |
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Preference number: 6 (lower is better) Translates to: SPKVSNSTRKEF*LAIRATFGAHR Trigger: GCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 90 bp | AACCTTCAATTCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTaGGCTTGCCATTCGCGCGACGTTCGGAGCACACCGCGGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NLQFTKGVELYTEGI*ACHSRDVRSTPREG Trigger: ACCCTCCCGCGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGAATTGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CCA 72 bp | CACAGCAGTGCCTCCAGCAGCGAGCTCGTAGATTCTTaGCATGGCGGCTTTTATTCTCACCATCGCATACTG | + |
|
Preference number: 6 (lower is better) Translates to: HSSASSSELVDS*HGGFYSHHRIL Trigger: CAGTATGCGATGGTGAGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 72 bp | TTCACCAAAGGTGTCGAACTCTACACGGAAGGAATTTaGGCTTGCCATTCGCGCGACGTTCGGAGCACACCG | + |
|
Preference number: 6 (lower is better) Translates to: FTKGVELYTEGI*ACHSRDVRSTP Trigger: CGGTGTGCTCCGAACGTCGCGCGAATGGCAAGCCAAAATTCCTTCCGTGTAGAGTTCGACACCTTTGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 72 bp | CCACAGCAGTGCCTCCAGCAGCGAGCTCGTAGATTCTaGGCATGGCGGCTTTTATTCTCACCATCGCATACT | + |
|
Preference number: 6 (lower is better) Translates to: PQQCLQQRARRF*AWRLLFSPSHT Trigger: AGTATGCGATGGTGAGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CCA 72 bp | CAGTGCCTCCAGCAGCGAGCTCGTAGATTCTTGGCATaGCGGCTTTTATTCTCACCATCGCATACTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: QCLQQRARRFLA*RLLFSPSHTGL Trigger: AAGTCCAGTATGCGATGGTGAGAATAAAAGCCGCCATGCCAAGAATCTACGAGCTCGCTGCTGGAGGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS TCA 72 bp | TCCTGTCCAAGAGTAAGAGGGACAGCATCCTGCGTGTaGGTTCGCCCAATTTTGATGACCTGCGCAAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCPRVRGTASCV*VRPILMTCANS Trigger: AGAGTTTGCGCAGGTCATCAAAATTGGGCGAACTCACACGCAGGATGCTGTCCCTCTTACTCTTGGACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 72 bp | AGTAGGGTTCACCTTTCCTGTGAGTGCTGCTACTTTTaGGGCCACCTTTTCTGCGAAACCGATCCTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRVHLSCECCYF*GHLFCETDPGV Trigger: AACACCAGGATCGGTTTCGCAGAAAAGGTGGCCGCAAAAGTAGCAGCACTCACAGGAAAGGTGAACCCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176740.2 |
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| CDS TCA 72 bp | TCATGGAGCTTCTGTAACCCTGGCAACAGGACCTTGTaGACTTCCACTGCAGCAGCAATATGCATTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSFCNPGNRTL*TSTAAAICIAV Trigger: CACAGCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAGGTCCTGTTGCCAGGGTTACAGAAGCTCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS TCA 72 bp | GGAAAGGTGTCATTCGAGCTCTGGCTTTTGTTAACATaGTCATTGGGGTGCACAGGCTTCTTGCTGCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GKVSFELWLLLT*SLGCTGFLLPS Trigger: ACTTGGCAGCAAGAAGCCTGTGCACCCCAATGATCATGTTAACAAAAGCCAGAGCTCGAATGACACCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS GCA 72 bp | GACCTTGTGAACTTCCACTGCAGCAGCAATATGCATTaGTGTGGGAAAGGTGTCATTCGAGCTCTGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLVNFHCSSNMH*CGKGVIRALAF Trigger: AAAAGCCAGAGCTCGAATGACACCTTTCCCACAGCAATGCATATTGCTGCTGCAGTGGAAGTTCACAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 90 bp | GATTCTTGGCATGGCGGCTTTTATTCTCACCATCGCATACTGGACTaGCTGAACGTAACCACTGAATTCCTGTCCAAGAGTAAGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: DSWHGGFYSHHRILD*LNVTTEFLSKSKRD Trigger: GTCCCTCTTACTCTTGGACAGGAATTCAGTGGTTACGTTCAGCAAGTCCAGTATGCGATGGTGAGAATAAAAGCCGCCATGCCAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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| CDS CAA 72 bp | CATGGCGGCTTTTATTCTCACCATCGCATACTGGACTaGCTGAACGTAACCACTGAATTCCTGTCCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HGGFYSHHRILD*LNVTTEFLSKS Trigger: ACTCTTGGACAGGAATTCAGTGGTTACGTTCAGCAAGTCCAGTATGCGATGGTGAGAATAAAAGCCGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027810.14 |
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