Pregenerated sensors for FGR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028874Ensembl transcript IDs: ENSMUST00000030693.13, ENSMUST00000171223.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTGCTTTCTGGGTCTCTCAACTCATGGTGAACTGACATGTGGGTaGACAGTGGGACATAGGGGTGCCCTGAAGCCCCACGTGCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: TCFLGLSTHGELTCG*TVGHRGALKPHVLG Trigger: ACCCAGCACGTGGGGCTTCAGGGCACCCCTATGTCCCACTGTTCACCCACATGTCAGTTCACCATGAGTTGAGAGACCCAGAAAGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR TCA 90 bp | TTCTTACATAATGAATACACACATACACGTCCCTCAGAGGGGTGGTaGGCATTCAACAGCTCTCTCCCTCAGACCTGGGCCCGGACCGGA | + |
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Preference number: 1 (lower is better) Translates to: FLHNEYTHTRPSEGW*AFNSSLPQTWARTG Trigger: TCCGGTCCGGGCCCAGGTCTGAGGGAGAGAGCTGTTGAATGCTCACCACCCCTCTGAGGGACGTGTATGTGTGTATTCATTATGTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 90 bp | ACTCCGCCCTCCCCACAAATAGCCAAAGCTATCCTGTTCGCCTCCTaGAGACTACCACCCCTCTCCATAGATGGCTCAGGAAATTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: TPPSPQIAKAILFAS*RLPPLSIDGSGNCS Trigger: AGAACAATTTCCTGAGCCATCTATGGAGAGGGGTGGTAGTCTGCAGGAGGCGAACAGGATAGCTTTGGCTATTTGTGGGGAGGGCGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR CCA 90 bp | GGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTaGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: GERLTVCRSLMGQEK*YWGQSVRERSSEHP Trigger: TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR TCA 90 bp | GTTCGAGAGAGGAGCTCTGAGCATCCACTTACTTCATCTGTGAAATaGGTGGGATGCCCTAGATTTTTGGATGGGGCATGGGTGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VRERSSEHPLTSSVK*VGCPRFLDGAWVGR Trigger: CCTTCCCACCCATGCCCCATCCAAAAATCTAGGGCATCCCACTCATTTCACAGATGAAGTAAGTGGATGCTCAGAGCTCCTCTCTCGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR GCA 90 bp | CACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCATTTaGACCCTCTATAAAATGGCTTCAGAGCGTCGGACCTTCTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: HLGSEEVRDEFLVSI*TLYKMASERRTFSD Trigger: ATCAGAGAAGGTCCGACGCTCTGAAGCCATTTTATAGAGGGTGCAAATGGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATGCACTGGGACCAGAGTaGCCCGGGGGATTGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GQEKWYWGQSVRERSSEHALGPE*PGGLAR Trigger: TCTTGCCAATCCCCCGGGGCACTCTGGTCCCAGTGC...ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR CCA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTAGGGGTTCCAAGTCTTaGGCACTGGGACCAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSRGSKS*ALGPEC Trigger: GCACTCTGGTCCCAGTGCCCAAGACTTGGAACCCCT...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTAGGGGTTCCAAGTCTTaGGCACTGGGACCAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: EKWYWGQSVRERSSEHPLRGSKS*ALGPEC Trigger: GCACTCTGGTCCCAGTGCCCAAGACTTGGAACCCCT...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCAATAAACACTTCCTGACAGGAGAGGTGAGACTCCATATATCCTGTTCTGCACTGGGACCAGAGTaGCCCGGGGGATTGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RANKHFLTGEVRLHISCSALGPE*PGGLAR Trigger: TCTTGCCAATCCCCCGGGGCACTCTGGTCCCAGTGC...AGAACAGGATATATGGAGTCTCACCTCTCCTGTCAGGAAGTGTTTATTGGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCAAGTGCCCCGGGGGATTaGCAAGAGCAAGTACATACT | + |
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Preference number: 2 (lower is better) Translates to: QEKWYWGQSVRERSSEHPSAPGD*QEQVHT Trigger: AGTATGTACTTGCTCTTGCCAATCCCCCGGGGCACT...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATCCTCCTCTTGCTGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGATGGGACAGGAAAAGTaGTACTGGGGTCAGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PSSSSCCVLGSLRAVESLMGQEK*YWGQSV Trigger: AACACTCTGACCCCAGTACCACTTTTCCTGTCCCAT...CAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACAGCAAGAGGAGGATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | GGACATAGGGGTGCCCTGAAGCCCCACGTGCTGGGTATCTGGCACTTAGTAGGTAGTATTTTTAGGAGATaGGGAGAGAGACTAACGGTA | + |
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Preference number: 2 (lower is better) Translates to: GHRGALKPHVLGIWHLVGSIFRR*GERLTV Trigger: TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACT...ACCTACTAAGTGCCAGATACCCAGCACGTGGGGCTTCAGGGCACCCCTATGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGCTCTTACTCATTTTTATTTGCTCAGGGTCCTGCTCAGTGAAGGGCCCATCAAAAGCTCCCTGGGGTaGGGAAGAGCCCACCCTACT | + |
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Preference number: 2 (lower is better) Translates to: IALTHFYLLRVLLSEGPIKSSLG*GRAHPT Trigger: AGTAGGGTGGGCTCTTCCCCACCCCAGGGAGCTTTT...GATGGGCCCTTCACTGAGCAGGACCCTGAGCAAATAAAAATGAGTAAGAGCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCCTCTTGCTGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTAGATGCCCTAGATTTTTaGATGGGGCATGGGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: ILLLLCSGEPESCREFVVDALDF*MGHGWE Trigger: TTCCCACCCATGCCCCATCCAAAAATCTAGGGCATC...TACAACAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACAGCAAGAGGAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCACAATCACCTGCTTTCTaGGTCTCTCAACTCATGGTG | + |
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Preference number: 2 (lower is better) Translates to: GEPESCREFVVFFSMPLPQSPAF*VSQLMV Trigger: CACCATGAGTTGAGAGACCCAGAAAGCAGGTGATTG...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCACACTTACTTCATCTGTaGAATGAGTGGGATGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GEPESCREFVVFFSMPLPHLLHL*NEWDAL Trigger: TAGGGCATCCCACTCATTTCACAGATGAAGTAAGTG...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR TCA 90 bp | TTCCAAAGAGGCATGTCAGCTACCAGTTTCTCCACAGAGGATCCAAGAAGTACACAACTCATGGTGAACTaGCATGTGGGTGAACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FQRGMSATSFSTEDPRSTQLMVN*HVGEQW Trigger: CCACTGTTCACCCACATGTCAGTTCACCATGAGTTG...TGTACTTCTTGGATCCTCTGTGGAGAAACTGGTAGCTGACATGCCTCTTTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCCTCTTGCTGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTATTTGCAATCACCTaGTTTCTGGGTCTCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: ILLLLCSGEPESCREFVVLFAIT*FLGLST Trigger: AGTTGAGAGACCCAGAAAGCAGGTGATTGCAAATAA...TACAACAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACAGCAAGAGGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CCA 90 bp | AAAACCACATTTGTCTTATTTGCAATCACCTGCTTTCTGGGTCTCTCAACTCATAGTGCCCCGGGGGATTaGCAAGAGCAAGTACATACT | + |
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Preference number: 2 (lower is better) Translates to: KTTFVLFAITCFLGLSTHSAPGD*QEQVHT Trigger: AGTATGTACTTGCTCTTGCCAATCCCCCGGGGCACT...ATGAGTTGAGAGACCCAGAAAGCAGGTGATTGCAAATAAGACAAATGTGGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 72 bp | CACAGGGGTTCCAAGTCTTGGGCACTGGGACCAGAGTaGCCCGGGGGATTGGCAAGAGCAAGTACATACTCC | + |
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Preference number: 3 (lower is better) Translates to: HRGSKSWALGPE*PGGLARASTYS Trigger: GGAGTATGTACTTGCTCTTGCCAATCCCCCGGGGCACTCTGGTCCCAGTGCCCAAGACTTGGAACCCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR TCA 72 bp | GGGGAAGAGCCCACCCTACTCCCCAGTGAGGTGGTATaGGCTAGGCCTTCATCCTCCTCTTGCTGTGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: GEEPTLLPSEVV*ARPSSSSCCVL Trigger: CAGAACACAGCAAGAGGAGGATGAAGGCCTAGCTCATACCACCTCACTGGGGAGTAGGGTGGGCTCTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR TCA 72 bp | CTGGGTCTCTCAACTCATGGTGAACTGACATGTGGGTaGACAGTGGGACATAGGGGTGCCCTGAAGCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LGLSTHGELTCG*TVGHRGALKPH Trigger: GTGGGGCTTCAGGGCACCCCTATGTCCCACTGTTCACCCACATGTCAGTTCACCATGAGTTGAGAGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR CCA 72 bp | CATAGGGGTGCCCTGAAGCCCCACGTGCTGGGTATCTaGCACTTAGTAGGTAAGAGGGAACTGCTAACCACC | + |
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Preference number: 3 (lower is better) Translates to: HRGALKPHVLGI*HLVGKRELLTT Trigger: GGTGGTTAGCAGTTCCCTCTTACCTACTAAGTGCCAGATACCCAGCACGTGGGGCTTCAGGGCACCCCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CAA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTCAGGGGTTCCAAGTCTaGGGCACTGGGACCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSQGFQV*GTGTRV Trigger: CACTCTGGTCCCAGTGCCCAAGACTTGGAACCCCTG...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTCAGGGGTTCCAAGTCTaGGGCACTGGGACCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: EKWYWGQSVRERSSEHPLQGFQV*GTGTRV Trigger: CACTCTGGTCCCAGTGCCCAAGACTTGGAACCCCTG...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR TCA 72 bp | AATGAATACACACATACACGTCCCTCAGAGGGGTGGTaGGCATTCAACAGCTCTCTCCCTCAGACCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: NEYTHTRPSEGW*AFNSSLPQTWA Trigger: GGCCCAGGTCTGAGGGAGAGAGCTGTTGAATGCTCACCACCCCTCTGAGGGACGTGTATGTGTGTATTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 72 bp | TCCCCACAAATAGCCAAAGCTATCCTGTTCGCCTCCTaGAGACTACCACCCCTCTCCATAGATGGCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: SPQIAKAILFAS*RLPPLSIDGSG Trigger: TCCTGAGCCATCTATGGAGAGGGGTGGTAGTCTGCAGGAGGCGAACAGGATAGCTTTGGCTATTTGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR CCA 72 bp | GTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTaGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: VCRSLMGQEKWY*GQSVRERSSEH Trigger: ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR CCA 72 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTaGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LTVCRSLMGQEK*YWGQSVRERSS Trigger: AGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGAGGTGGTATGAGCTAGGCCTTCATCCTCCTCTTGCTGTGTTCTGGGGAGGGAAAAATGAACACTaGGGGTCAGAGGAGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: PVRWYELGLHPPLAVFWGGKNEH*GSEEVR Trigger: TCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC...TCCCCAGAACACAGCAAGAGGAGGATGAAGGCCTAGCTCATACCACCTCACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CAA 90 bp | ATCCTCCTCTTGCTGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTAGGATGCCCTAGATTTTaGGATGGGGCATGGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ILLLLCSGEPESCREFVVGCPRF*DGAWVG Trigger: TCCCACCCATGCCCCATCCAAAAATCTAGGGCATCC...TACAACAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACAGCAAGAGGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 72 bp | CTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATaGCTCTGCCATGGGAGGCCTAAGACTGTGCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: LRAVESLLYSSP*LCHGRPKTVPV Trigger: CACTGGCACAGTCTTAGGCCTCCCATGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR-3UTR CAA 90 bp | AGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGGGGAAAAATGAACACTaGGGGTCAGAGGAGGTAAGA | + |
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Preference number: 3 (lower is better) Translates to: RLTVCRSLMGQEKWYWGQGKNEH*GSEEVR Trigger: TCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC...CTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| 3UTR TCA 72 bp | TCTTACTCATTTTTATTTGCTCAGGGTCCTGCTCAGTaGAGGGCCCATCAGAGTCAATTCTTAGTAATTGCC | + |
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Preference number: 3 (lower is better) Translates to: SYSFLFAQGPAQ*RAHQSQFLVIA Trigger: GGCAATTACTAAGAATTGACTCTGATGGGCCCTTCACTGAGCAGGACCCTGAGCAAATAAAAATGAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 72 bp | AGATTCAAAACCACATTTGTCTTATTTGCAATCACCTaGTTTCTGGGTCTCTCAACTCATGGTGAACTGACA | + |
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Preference number: 3 (lower is better) Translates to: RFKTTFVLFAIT*FLGLSTHGELT Trigger: TGTCAGTTCACCATGAGTTGAGAGACCCAGAAAGCAGGTGATTGCAAATAAGACAAATGTGGTTTTGAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR GCA 72 bp | TCCATAGATGGCTCAGGAAATTGTTCTAGCCTGGTGTaGATATCATCGTTGTTCTTACATAATGAATACACA | + |
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Preference number: 3 (lower is better) Translates to: SIDGSGNCSSLV*ISSLFLHNEYT Trigger: TGTGTATTCATTATGTAAGAACAACGATGATATGCACACCAGGCTAGAACAATTTCCTGAGCCATCTATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR TCA 90 bp | AGGGGTGCCCTGAAGCCCCACGTGCTGGGTATCTGGCACTTAGTAGGTAAGAGGGCCACGCCTGCTCCATaGCCTCATACAGGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGALKPHVLGIWHLVGKRATPAP*PHTGMQ Trigger: CTGCATCCCTGTATGAGGTCATGGAGCAGGCGTGGC...CCTCTTACCTACTAAGTGCCAGATACCCAGCACGTGGGGCTTCAGGGCACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR TCA 90 bp | GAGGGAACTGCTAACCACCCCACTCCGCCCTCCCCACAAATAGCCAAAGCTATCGGTCACTCCGGTCCCTaGGATGCTTCTCATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: EGTANHPTPPSPQIAKAIGHSGP*DASHVA Trigger: GGCAACATGAGAAGCATCTCAGGGACCGGAGTGACC...GATAGCTTTGGCTATTTGTGGGGAGGGCGGAGTGGGGTGGTTAGCAGTTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| 3UTR CAA 72 bp | AAGTCTTGGGCACTGGGACCAGAGTGCCCCGGGGGATaGGCAAGAGCAAGTACATACTCCCAGAGGGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: KSWALGPECPGG*ARASTYSQRVS Trigger: ACTGACCCTCTGGGAGTATGTACTTGCTCTTGCCAATCCCCCGGGGCACTCTGGTCCCAGTGCCCAAGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCAGCAGGGCTGGTGGGCTaGGGAAAGACGGACGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GEPESCREFVVFFSMPLPAGLVG*GKTDEV Trigger: GACTTCGTCCGTCTTTCCTCAGCCCACCAGCCCTGC...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR TCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCAGCCACGCCTGCTCCATaGCCTCATACAGGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPATPAP*PHTGMQ Trigger: CTGCATCCCTGTATGAGGTCATGGAGCAGGCGTGGC...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR GCA 90 bp | GAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCTCCAAAGCAGCCGGTaGCCAGCCTGCGTTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ERLTVCRSLMGQEKWYWGLQSSR*PACVPV Trigger: CACTGGAACGCAGGCTGGGCACCGGCTGCTTTGGAG...ACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CCA 90 bp | CCAGTGAGGTGGTATGAGCTAGGCCTTCATCCTCCTCTTGCTGTGTTCTGGGGAGGTCATCCCCTGTCCTaGCCTCATAGTCGTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVRWYELGLHPPLAVFWGGHPLS*PHSRTG Trigger: CCCTGTACGACTATGAGGCCAGGACAGGGGATGACC...TCCCCAGAACACAGCAAGAGGAGGATGAAGGCCTAGCTCATACCACCTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR CCA 90 bp | GGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATTCTCCCAGGCATCCTTaGCCAGGCCTAGAGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQEKWYWGQSVRERSSEHSPRHP*PGLESG Trigger: CCCAGACTCTAGGCCTGGCCAAGGATGCCTGGGAGA...ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CCA 90 bp | GGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATATGCCTTCGGGGACATaGTGCCCGGCTTCAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: GQEKWYWGQSVRERSSEHMPSGT*CPASAS Trigger: AGACGCTGAAGCCGGGCACCATGTCCCCGAAGGCAT...ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR TCA 90 bp | ATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGATCTCGCTTTCCCGAATaGGAAAGGCCCCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSEPNGTGKVVLGSECSRSRFPE*ERPPGG Trigger: ACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGA...TCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCAGCCTCAGCAGCTTCATaGTCTGTGCCTCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPASAAS*SVPPPG Trigger: TCCTGGAGGAGGCACAGATCATGAAGCTGCTGAGGC...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCATTTGCACCCTCAGCCGGTGCCCAGCCTaGGTTCCAGTGCTATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSEEVRDEFLVSICTLSRCPA*VPVLWS Trigger: ACTCCATAGCACTGGAACGCAGGCTGGGCACCGGCT...GAGGGTGCAAATGGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KWYWGQSVRERSSEHPLTPSGTW*PASASS Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...AGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTTCCTTCGGGGACATGGTaGCCGGCTTCAGCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGTGVRVFERGALSIHLLPSGTW*PASASS Trigger: TGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAGG...AAGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTGTTCCATGTAGGCCATaGCCTCGGCTACCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWYWGQSVRERSSEHPLTVPCRP*PRLPGQ Trigger: CTGCCCAGGTAGCCGAGGGCATGGCCTACATGGAAC...AGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGCGTTCTTCAGCCGTTTaGCTCCGGAAGTCCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALRSSAV*LRKSPS Trigger: GGAAGGGGACTTCCGGAGCCAAACGGCTGAAGAACG...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATTCATGTTGCCAGTGTTaGGGAAAGCAGGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQEKWYWGQSVRERSSEHSCCQC*GKQGWW Trigger: CCACCAGCCCTGCTTTCCTCAACACTGGCAACATGA...ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCATCATGTTGCCAGTGTTaGGGAAAGCAGGGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPSCCQC*GKQGWW Trigger: CCACCAGCCCTGCTTTCCTCAACACTGGCAACATGA...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGACTCATTGTCCTCTATaGGGCGTGCCAGCCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALTHCPL*GVPARS Trigger: ACTTCGGGCTGGCACGCCTCATAGAGGACAATGAGT...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGGACCTCATACAGGGATaGAGGACATCCTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALDLIQG*RTSWRA Trigger: TGCCCTCCAGGATGTCCTGCATCCCTGTATGAGGTC...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCGTTCTTCAGCCGTTTaGCTCCGGAAGTCCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVCRSLMGQEKWYWGRSSAV*LRKSPS Trigger: GGAAGGGGACTTCCGGAGCCAAACGGCTGAAGAACG...ACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGGGAGTAGGCCCCTTTaGTGGTCTCGCTTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EMGRETNGMSEPNGTGKVGSRPL*WSRFPE Trigger: TTCGGGAAAGCGAGACCACCAAAGGGGCCTACTCCC...CACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTATGCCCTCGGCTACCTaGGCAGCCATGTCCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKWYWGQSVRERSSEHPLMPSAT*AAMSTR Trigger: TCTAGTGGACATGGCTGCCCAGGTAGCCGAGGGCAT...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTATGCCCTCGGCTACCTaGGCAGCCATGTCCACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSMPSAT*AAMSTR Trigger: TCTAGTGGACATGGCTGCCCAGGTAGCCGAGGGCAT...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATGCAGGTACTCAAAGGTaGGCCTCTCCTCTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQEKWYWGQSVRERSSEHAGTQR*ASPLDP Trigger: TGGATCCAGAGGAGAGGCCCACCTTTGAGTACCTGC...ATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCATTTGCACCCTCACTCATTGTCCTCTATaGGGCGTGCCAGCCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSEEVRDEFLVSICTLTHCPL*GVPARS Trigger: ACTTCGGGCTGGCACGCCTCATAGAGGACAATGAGT...GAGGGTGCAAATGGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGTCACTGCCACCTTTGTaGTGCAGTTCCATGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALSLPPL*CSSMCP Trigger: TGGGCACATGGAACTGCAGCACAAAGGTGGCAGTGA...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTATGAGAAAGGCCCCCTaGGGGTTACCAGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVCRSLMGQEKWYWGMRKAP*GLPEDR Trigger: TCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTCAT...ACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAATGAGAAAGGCCCCCTaGGGGTTACCAGAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSEPNGTGKVVLGSECSRMRKAP*GLPEDR Trigger: TCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTCAT...TCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGCAGGTACTCAAAGGTaGGCCTCTCCTCTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSEPNGTGKVVLGSECSRAGTQR*ASPLDP Trigger: TGGATCCAGAGGAGAGGCCCACCTTTGAGTACCTGC...TCTCGAACACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| 3UTR CAA 72 bp | TGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGTaGTATTCTTCTCCATGCCTCTGCCATGGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVLGSLRAVESL*YSSPCLCHGRP Trigger: AGGCCTCCCATGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCTTACTCATTTTTATTTGCTCAGGGTCCTGCTCAGTGAAGGGCCCATCTCTCGCTTTCCCGAATaGGAAAGGCCCCCTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IALTHFYLLRVLLSEGPISRFPE*ERPPGG Trigger: ACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGA...GATGGGCCCTTCACTGAGCAGGACCCTGAGCAAATAAAAATGAGTAAGAGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACCCAAGAGATGCTAAGAATTAAATTCTTAGGGTCTGGGCTGGAGCAGACTGGGCCCGTGTGGTaGTGTAGTAGCCGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RETQEMLRIKFLGSGLEQTGPVW*CSSRPC Trigger: ACACGGGCGGCTACTACATCACCACACGGGCCCAGT...CTGCTCCAGCCCAGACCCTAAGAATTTAATTCTTAGCATCTCTTGGGTTTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGAACTGCTAACCACCCCACTCCGCCCTCCCCACAAATAGCCAAAGCTATCCAGAAGCTGCCTCTCTaGATCCTTTCTACTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGTANHPTPPSPQIAKAIQKLPL*ILSTDL Trigger: AAGATCAGTAGAAAGGATGCAGAGAGGCAGCTTCTG...GATAGCTTTGGCTATTTGTGGGGAGGGCGGAGTGGGGTGGTTAGCAGTTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGCCAGAGGACAGAAGCTaGCTCTCTGCATCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALPEDRS*LSASFL Trigger: TAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGG...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACCAGAGGACAGAAGCTaGCTCTCTGCATCCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPPEDRS*LSASFL Trigger: TAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGG...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGAAGCCGGTGCCCAGCCTaGGTTCCAGTGCTATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIFRRWGERLTVCRSLMGSRCPA*VPVLWS Trigger: ACTCCATAGCACTGGAACGCAGGCTGGGCACCGGCT...TCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCATTTGCACCCTCTGCTGCAGTTCCATGTaGCCAGCCACACATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGSEEVRDEFLVSICTLCCSSM*PATHLQ Trigger: TTGGAGATGTGTGGCTGGGCACATGGAACTGCAGCA...GAGGGTGCAAATGGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTTGCTGCAGTTCCATGTaGCCAGCCACACATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVCRSLMGQEKWYWGCCSSM*PATHLQ Trigger: TTGGAGATGTGTGGCTGGGCACATGGAACTGCAGCA...ACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAAAGAGGCATGTCAGCTACCAGTTTCTCCACAGAGGATCCAAGAAGTACATGCCTCCTCCAGGAATaGCTTCGGGGACATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQRGMSATSFSTEDPRSTCLLQE*LRGHGA Trigger: GGCACCATGTCCCCGAAGGCATTCCTGGAGGAGGCA...TGTACTTCTTGGATCCTCTGTGGAGAAACTGGTAGCTGACATGCCTCTTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAATGAACACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCGGGAGTAGGCCCCTTTaGTGGTCTCGCTTTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKNEHLGSEEVRDEFLVSGSRPL*WSRFPE Trigger: TTCGGGAAAGCGAGACCACCAAAGGGGCCTACTCCC...GGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAATGAACACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCGGATGCAGGACATCCTaGAGGGCACGGCATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKNEHLGSEEVRDEFLVSGCRTS*RARHVV Trigger: TACCACATGCCGTGCCCTCCAGGATGTCCTGCATCC...GGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAAAGAGGCATGTCAGCTACCAGTTTCTCCACAGAGGATCCAAGAAGTACAGCCTCAGCAGCTTCATaGTCTGTGCCTCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQRGMSATSFSTEDPRSTASAAS*SVPPPG Trigger: TCCTGGAGGAGGCACAGATCATGAAGCTGCTGAGGC...TGTACTTCTTGGATCCTCTGTGGAGAAACTGGTAGCTGACATGCCTCTTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR TCA 90 bp | AGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTTGGCAGCATCAAGTTCTaGCCTTCTCGATCCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTGVRVFERGALSIHLLGSIKF*PSRSFR Trigger: CCTAAAGGATCGAGAAGGTCAGAACTTGATGCTGCC...AAGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTGGCAGCATCAAGTTCTaGCCTTCTCGATCCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KWYWGQSVRERSSEHPLTGSIKF*PSRSFR Trigger: CCTAAAGGATCGAGAAGGTCAGAACTTGATGCTGCC...AGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCAGTGGTTCTGTGGAGGTaGAATAGTCTTCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPVVLWR*NSLPGK Trigger: CTTTCCTGGAAGACTATTTCACCTCCACAGAACCAC...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTCACATCCTCCTTGGATaGAGGCTCCAACTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKWYWGQSVRERSSEHPLHILLG*RLQLLA Trigger: TGCAAGAAGTTGGAGCCTGCATCCAAGGAGGATGTG...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGCAGGAGCAACATAGTTaGTGGGAACATAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALQEQHS*WEHSLC Trigger: ACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTG...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGCAGCTTCATGATCTGTaGCTCCTCCAGGAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRETNGMSEPNGTGKVVLQLHDL*LLQECL Trigger: AAGGCATTCCTGGAGGAGGCACAGATCATGAAGCTG...CAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGCAGCTTCATGATCTGTaGCTCCTCCAGGAATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLTVCRSLMGQEKWYWGQQLHDL*LLQECL Trigger: AAGGCATTCCTGGAGGAGGCACAGATCATGAAGCTG...CTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTCGGAGCGGTCATCCCCTGTCCTaGCCTCATAGTCGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRMSIFRRWGERLTVCRSGHPLS*PHSRTG Trigger: CCCTGTACGACTATGAGGCCAGGACAGGGGATGACC...GCTCCGACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCAACTCTTCAGCCTGGATaGAATCCACAGGAGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QEKWYWGQSVRERSSEHPTLQPG*NPQEQH Trigger: ATGTTGCTCCTGTGGATTCCATCCAGGCTGAAGAGT...TGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGCTGTCACAATATAAATaGGTTCCTCCGACACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALLSQYK*VPPTPP Trigger: CGGTGGTGTCGGAGGAACCCATTTATATTGTGACAG...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGCTGCATCCTTTCTACTaGTCTTTCCGAAGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALLHPFY*SFRSTT Trigger: AGTGGTACTTCGGAAAGATCAGTAGAAAGGATGCAG...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTACTGGGCCCGTGTGGTaGTGTAGTAGCCGCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRQRMSIFRRWGERLTVCTGPVW*CSSRPC Trigger: ACACGGGCGGCTACTACATCACCACACGGGCCCAGT...ACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTAAAGGACCACACGTCTaGTTTGACAGTGAATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSKGPHV*FDSESA Trigger: GGCAGATTCACTGTCAAATCAGACGTGTGGTCCTTT...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTAAAGGACCACACGTCTaGTTTGACAGTGAATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVCRSLMGQEKWYWGKGPHV*FDSESA Trigger: GGCAGATTCACTGTCAAATCAGACGTGTGGTCCTTT...ACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTGGTGGATATAGTTCATaGGTTCCATGTAGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KWYWGQSVRERSSEHPLTGGYSS*VPCRPC Trigger: GCATGGCCTACATGGAACGCATGAACTATATCCACC...AGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTGAGCAACATAGTTGCTaGGAACATAGCCTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSEQHSC*EHSLCV Trigger: GACACAGAGGCTATGTTCCCAGCAACTATGTTGCTC...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | TCCATATATCCTGTTCTCCTGGTTTCCAAAGAGGCATGTCAGCTACCAGTTTCTGGATGCAGGACATCCTaGAGGGCACGGCATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIYPVLLVSKEACQLPVSGCRTS*RARHVV Trigger: TACCACATGCCGTGCCCTCCAGGATGTCCTGCATCC...AGAAACTGGTAGCTGACATGCCTCTTTGGAAACCAGGAGAACAGGATATATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CCA 90 bp | GAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGTCCAGGCTGGTACTGTaGTTCTGTGGAGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EMGRETNGMSEPNGTGKVSRLVL*FCGGEI Trigger: TATTTCACCTCCACAGAACCACAGTACCAGCCTGGA...CACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTTCCAGGCTGGTACTGTaGTTCTGTGGAGGTGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: EKWYWGQSVRERSSEHPLSRLVL*FCGGEI Trigger: TATTTCACCTCCACAGAACCACAGTACCAGCCTGGA...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | ATAACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTAGCAGGGCTGGTGGGCTaGGGAAAGACGGACGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITRQRMSIFRRWGERLTVAGLVG*GKTDEV Trigger: GACTTCGTCCGTCTTTCCTCAGCCCACCAGCCCTGC...TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | ACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTGTTCCATGTAGGCCATaGCCTCGGCTACCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRQRMSIFRRWGERLTVCVPCRP*PRLPGQ Trigger: CTGCCCAGGTAGCCGAGGGCATGGCCTACATGGAAC...ACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAACCCAAGAGATGCTAAGAATTAAATTCTTAGGGTCTGGGCTGGAGCAGGACCTCATACAGGGATaGAGGACATCCTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RETQEMLRIKFLGSGLEQDLIQG*RTSWRA Trigger: TGCCCTCCAGGATGTCCTGCATCCCTGTATGAGGTC...CTGCTCCAGCCCAGACCCTAAGAATTTAATTCTTAGCATCTCTTGGGTTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CCA 90 bp | AAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTACTGTATTGTTCAGGATGTaGAACTTCTCGCCTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWYWGQSVRERSSEHPLTVLFRM*NFSPLV Trigger: CACCAAAGGCGAGAAGTTCCACATCCTGAACAATAC...AGTAAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTTCTCCCAGGCATCCTTaGCCAGGCCTAGAGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRQRMSIFRRWGERLTVCSPRHP*PGLESG Trigger: CCCAGACTCTAGGCCTGGCCAAGGATGCCTGGGAGA...ACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| 3UTR CAA 72 bp | GCCTCCAGGATAGGAATAGCTCTTACTCATTTTTATTaGCTCAGGGTCCTGCTCAGTGAAGGGCCCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASRIGIALTHFY*LRVLLSEGPIR Trigger: TCTGATGGGCCCTTCACTGAGCAGGACCCTGAGCAAATAAAAATGAGTAAGAGCTATTCCTATCCTGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | ATAACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGCCTCCTCCAGGAATaGCTTCGGGGACATGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITRQRMSIFRRWGERLTVCLLQE*LRGHGA Trigger: GGCACCATGTCCCCGAAGGCATTCCTGGAGGAGGCA...TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAATGAACACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCACTCTTCAGCCTGGATaGAATCCACAGGAGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GKNEHLGSEEVRDEFLVSTLQPG*NPQEQH Trigger: ATGTTGCTCCTGTGGATTCCATCCAGGCTGAAGAGT...GGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTCTGATCCTGTGCTAGGATTCCACAGGGGTTCCAAGTCTTGGGCACTGAGCTACCATAGCACATaGACTCTGTCACAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFSDPVLGFHRGSKSWALSYHST*TLSQYK Trigger: TTTATATTGTGACAGAGTTCATGTGCTATGGTAGCT...CAGTGCCCAAGACTTGGAACCCCTGTGGAATCCTAGCACAGGATCAGAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCCAATAAACACTTCCTGACAGGAGAGGTGAGACTCCATATATCCTGTTCTGAGCAACATAGTTGCTaGGAACATAGCCTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RANKHFLTGEVRLHISCSEQHSC*EHSLCV Trigger: GACACAGAGGCTATGTTCCCAGCAACTATGTTGCTC...AGAACAGGATATATGGAGTCTCACCTCTCCTGTCAGGAAGTGTTTATTGGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCATGGGAGGCCTAAGACTGTGCAACTTGGTTCCTTGTTaGGGGTTATACTCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCCILLHASAMGGLRLCNLVPC*GLYSLS Trigger: GGACAATGAGTATAACCCCCAACAAGGAACCAAGTT...GCACAGTCTTAGGCCTCCCATGGCAGAGGCATGGAGAAGAATACAACAAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACTGCATCCTTTCTACTaGTCTTTCCGAAGTACCACT | + |
|
Preference number: 4 (lower is better) Translates to: SIFRRWGERLTVCRSLMGLHPFY*SFRSTT Trigger: AGTGGTACTTCGGAAAGATCAGTAGAAAGGATGCAG...TCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR TCA 90 bp | TTATTCATTCATTATTTCTCCACCCAAGGGAAAGCCTCCAGGATAGGAATAGCTGTGGTTCTGTGGAGGTaGAATAGTCTTCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIHYFSTQGKASRIGIAVVLWR*NSLPGK Trigger: CTTTCCTGGAAGACTATTTCACCTCCACAGAACCAC...AGCTATTCCTATCCTGGAGGCTTTCCCTTGGGTGGAGAAATAATGAATGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | AAAACCACATTTGTCTTATTTGCAATCACCTGCTTTCTGGGTCTCTCAACTCATCACATCCTCCTTGGATaGAGGCTCCAACTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTTFVLFAITCFLGLSTHHILLG*RLQLLA Trigger: TGCAAGAAGTTGGAGCCTGCATCCAAGGAGGATGTG...ATGAGTTGAGAGACCCAGAAAGCAGGTGATTGCAAATAAGACAAATGTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | TTATTCATTCATTATTTCTCCACCCAAGGGAAAGCCTCCAGGATAGGAATAGCTGGTGGATATAGTTCATaGGTTCCATGTAGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIHYFSTQGKASRIGIAGGYSS*VPCRPC Trigger: GCATGGCCTACATGGAACGCATGAACTATATCCACC...AGCTATTCCTATCCTGGAGGCTTTCCCTTGGGTGGAGAAATAATGAATGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR TCA 90 bp | TTCCAAAGAGGCATGTCAGCTACCAGTTTCTCCACAGAGGATCCAAGAAGTACAAGCTACCATAGCACATaGACTCTGTCACAATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQRGMSATSFSTEDPRSTSYHST*TLSQYK Trigger: TTTATATTGTGACAGAGTTCATGTGCTATGGTAGCT...TGTACTTCTTGGATCCTCTGTGGAGAAACTGGTAGCTGACATGCCTCTTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR GCA 90 bp | ATAACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTACAGGAGCAACATAGTTaGTGGGAACATAGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITRQRMSIFRRWGERLTVQEQHS*WEHSLC Trigger: ACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTG...TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CCA 90 bp | AAAACCACATTTGTCTTATTTGCAATCACCTGCTTTCTGGGTCTCTCAACTCATCTGTCACAATATAAATaGGTTCCTCCGACACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KTTFVLFAITCFLGLSTHLSQYK*VPPTPP Trigger: CGGTGGTGTCGGAGGAACCCATTTATATTGTGACAG...ATGAGTTGAGAGACCCAGAAAGCAGGTGATTGCAAATAAGACAAATGTGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CCA 90 bp | ACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTAACTTGGTTCCTTGTTaGGGGTTATACTCATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRQRMSIFRRWGERLTVCNLVPC*GLYSLS Trigger: GGACAATGAGTATAACCCCCAACAAGGAACCAAGTT...ACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS GCA 90 bp | TGCTGCAGTTCCATGTGCCCAGCCACACATCTCCAAAGCAGCCGGTaGCCAGCCTGCGTTCCAGTGCTATGGAGTTCCGGTCGATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CCSSMCPATHLQSSR*PACVPVLWSSGRSP Trigger: GGGAGATCGACCGGAACTCCATAGCACTGGAACGCAGGCTGGGCACCGGCTGCTTTGGAGATGTGTGGCTGGGCACATGGAACTGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS CCA 90 bp | ACCACTCTTCAGCCTGGATGGAATCCACAGGAGCAACATAGTTGCTaGGAACATAGCCTCTGTGTCCGGAGCTCAGGGAGCGAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLQPGWNPQEQHSC*EHSLCVRSSGSEPP Trigger: GGGAGGCTCGCTCCCTGAGCTCCGGACACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTGTGGATTCCATCCAGGCTGAAGAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGTGCCCTGAAGCCCCACGTGCTGGGTATCTGGCACTTAGTAGGTAAGAGGTGGAACTTCTCGCCTTaGGTGAAGGTGAGGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGALKPHVLGIWHLVGKRWNFSP*VKVRSS Trigger: GGATGACCTCACCTTCACCAAAGGCGAGAAGTTCCA...CCTCTTACCTACTAAGTGCCAGATACCCAGCACGTGGGGCTTCAGGGCACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS GCA 90 bp | AGTACCACTCTTCAGCCTGGATGGAATCCACAGGAGCAACATAGTTaGTGGGAACATAGCCTCTGTGTCCGGAGCTCAGGGAGCGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: STTLQPGWNPQEQHS*WEHSLCVRSSGSEP Trigger: AGGCTCGCTCCCTGAGCTCCGGACACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTGTGGATTCCATCCAGGCTGAAGAGTGGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS CCA 90 bp | AGGGAGCGAGCCTCCCACCAGTCATACTCCGTATTGTTCAGGATGTaGAACTTCTCGCCTTTGGTGAAGGTGAGGTCATCCCCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RERASHQSYSVLFRM*NFSPLVKVRSSPVL Trigger: CAGGACAGGGGATGACCTCACCTTCACCAAAGGCGAGAAGTTCCACATCCTGAACAATACGGAGTATGACTGGTGGGAGGCTCGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCATGGGAGGCCTAAGACTGTGCTCCCCCACCAGGATGTaGGCTGCCCTCAAGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVCCILLHASAMGGLRLCSPTRM*AALKSR Trigger: CCGAGACTTGAGGGCAGCCAACATCCTGGTGGGGGA...GCACAGTCTTAGGCCTCCCATGGCAGAGGCATGGAGAAGAATACAACAAACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS GCA 90 bp | GAGAAAGGCCCCCTGGGGGTTACCAGAGGACAGAAGCTGCCTCTCTaGATCCTTTCTACTGATCTTTCCGAAGTACCACTCTTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EKGPLGVTRGQKLPL*ILSTDLSEVPLFSL Trigger: CAGGCTGAAGAGTGGTACTTCGGAAAGATCAGTAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGAGGCCCACATCCTCCTaGGATGCAGGCTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: EMGRETNGMSEPNGTGKVRPTSS*DAGSNF Trigger: GAAGTTGGAGCCTGCATCCAAGGAGGATGTGGGCCT...CACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS GCA 90 bp | TCCCGAATGAGAAAGGCCCCCTGGGGGTTACCAGAGGACAGAAGCTaGCTCTCTGCATCCTTTCTACTGATCTTTCCGAAGTACCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SRMRKAPWGLPEDRS*LSASFLLIFPKYHS Trigger: AGAGTGGTACTTCGGAAAGATCAGTAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTCATTCGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTCTCATGTTGCCAGTGTaGAGGAAAGCAGGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSLMLPV*RKAGLV Trigger: CACCAGCCCTGCTTTCCTCAACACTGGCAACATGAG...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | AGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGATCCCCCACCAGGATGTaGGCTGCCCTCAAGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SIFRRWGERLTVCRSLMGSPTRM*AALKSR Trigger: CCGAGACTTGAGGGCAGCCAACATCCTGGTGGGGGA...TCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS TCA 90 bp | GGGGGTTACCAGAGGACAGAAGCTGCCTCTCTGCATCCTTTCTACTaGTCTTTCCGAAGTACCACTCTTCAGCCTGGATGGAATCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GGYQRTEAASLHPFY*SFRSTTLQPGWNPQ Trigger: CTGTGGATTCCATCCAGGCTGAAGAGTGGTACTTCGGAAAGATCAGTAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAAAATGAACACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCGGACGAAGTCCGGCCTaGAGTGGGGTCAGGGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: GKNEHLGSEEVRDEFLVSGRSPA*SGVREI Trigger: TATTTCCCTGACCCCACTCAAGGCCGGACTTCGTCC...GGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTGTTCATTTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | CACTTGGGGTCAGAGGAGGTAAGAGATGAGTTTCTCGTCTCCATTTGCACCCTCTGGAACTTCTCGCCTTaGGTGAAGGTGAGGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HLGSEEVRDEFLVSICTLWNFSP*VKVRSS Trigger: GGATGACCTCACCTTCACCAAAGGCGAGAAGTTCCA...GAGGGTGCAAATGGAGACGAGAAACTCATCTCTTACCTCCTCTGACCCCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCATCTTCACTGCCACCTTaGTGCTGCAGTTCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GEPESCREFVVFFSMPLPSSLPP*CCSSMC Trigger: GCACATGGAACTGCAGCACAAAGGTGGCAGTGAAGA...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
||
| CDS-3UTR CAA 90 bp | CTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGAGTTCTTCACTGCCACCTTaGTGCTGCAGTTCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTVCRSLMGQEKWYWGQSSSLPP*CCSSMC Trigger: GCACATGGAACTGCAGCACAAAGGTGGCAGTGAAGA...ACTCTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGAGGCATGTCAGCTACCAGTTTCTCCACAGAGGATCCAAGAAGTACAAGGCCCACATCCTCCTaGGATGCAGGCTCCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: FQRGMSATSFSTEDPRSTRPTSS*DAGSNF Trigger: GAAGTTGGAGCCTGCATCCAAGGAGGATGTGGGCCT...TGTACTTCTTGGATCCTCTGTGGAGAAACTGGTAGCTGACATGCCTCTTTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR CAA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCACCGAAGTCAGCGATCTaGCATATTAGGTATTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GEPESCREFVVFFSMPLPPKSAI*HIRYSP Trigger: GGGGGAATACCTAATATGCAAGATCGCTGACTTCGG...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR CAA 90 bp | CCTTCATCCTCCTCTTGCTGTGTTCTGGGGAGCCTGAGAGCTGTAGAGAGTTTGGACCACACGTCTGATTaGACAGTGAATCTGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PSSSSCCVLGSLRAVESLDHTSD*TVNLPK Trigger: CTTTGGCAGATTCACTGTCAAATCAGACGTGTGGTC...CAAACTCTCTACAGCTCTCAGGCTCCCCAGAACACAGCAAGAGGAGGATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR CAA 90 bp | GGGGAGCCTGAGAGCTGTAGAGAGTTTGTTGTATTCTTCTCCATGCCTCTGCCAGAGATGCTTCTCATGTaGCCAGTGTTGAGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GEPESCREFVVFFSMPLPEMLLM*PVLRKA Trigger: TGCTTTCCTCAACACTGGCAACATGAGAAGCATCTC...TGGCAGAGGCATGGAGAAGAATACAACAAACTCTCTACAGCTCTCAGGCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030693.13 |
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| CDS-3UTR CAA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTGAGATGCTTCTCATGTaGCCAGTGTTGAGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: EKWYWGQSVRERSSEHPLEMLLM*PVLRKA Trigger: TGCTTTCCTCAACACTGGCAACATGAGAAGCATCTC...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGTGGTACTGGGGTCAGAGTGTTCGAGAGAGGAGCTCTGAGCATCCACTTGACCACACGTCTGATTaGACAGTGAATCTGCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: EKWYWGQSVRERSSEHPLDHTSD*TVNLPK Trigger: CTTTGGCAGATTCACTGTCAAATCAGACGTGTGGTC...AAGTGGATGCTCAGAGCTCCTCTCTCGAACACTCTGACCCCAGTACCACTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | AGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGGTACTGGGGTCAGCAGTCATACTCCGTATaGTTCAGGATGTGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: RLTVCRSLMGQEKWYWGQQSYSV*FRMWNF Trigger: GAAGTTCCACATCCTGAACAATACGGAGTATGACTG...CTGACCCCAGTACCACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | GAGATGGGGAGAGAGACTAACGGTATGTCGGAGCCTAATGGGACAGGAAAAGTGCAGTCATACTCCGTATaGTTCAGGATGTGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: EMGRETNGMSEPNGTGKVQSYSV*FRMWNF Trigger: GAAGTTCCACATCCTGAACAATACGGAGTATGACTG...CACTTTTCCTGTCCCATTAGGCTCCGACATACCGTTAGTCTCTCTCCCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | ATAACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTACTCATGTTGCCAGTGTaGAGGAAAGCAGGGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ITRQRMSIFRRWGERLTVLMLPV*RKAGLV Trigger: CACCAGCCCTGCTTTCCTCAACACTGGCAACATGAG...TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS-3UTR CAA 90 bp | ATAACTAGACAAAGGATGAGTATTTTTAGGAGATGGGGAGAGAGACTAACGGTACCGAAGTCAGCGATCTaGCATATTAGGTATTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: ITRQRMSIFRRWGERLTVPKSAI*HIRYSP Trigger: GGGGGAATACCTAATATGCAAGATCGCTGACTTCGG...TACCGTTAGTCTCTCTCCCCATCTCCTAAAAATACTCATCCTTTGTCTAGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | CAGGCGCCACGCCTGCTCCATGACCTCATACAGGGATaGAGGACATCCTGGAGGGCACGGCATGTGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: QAPRLLHDLIQG*RTSWRARHVVA Trigger: GGCTACCACATGCCGTGCCCTCCAGGATGTCCTGCATCCCTGTATGAGGTCATGGAGCAGGCGTGGCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | CTTCGGGGACATGGTGCCCGGCTTCAGCGTCTTCACTaGCACCTTTGTGCTGCAGTTCCATGTGCCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRGHGARLQRLH*HLCAAVPCAQP Trigger: TGGCTGGGCACATGGAACTGCAGCACAAAGGTGGCAGTGAAGACGCTGAAGCCGGGCACCATGTCCCCGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | AAGGTGGGCCTCTCCTCTGGATCCAGGCGCCACGCCTaGTCCATGACCTCATACAGGGATGCAGGACATCCT | + |
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Preference number: 6 (lower is better) Translates to: KVGLSSGSRRHA*SMTSYRDAGHP Trigger: AGGATGTCCTGCATCCCTGTATGAGGTCATGGAGCAGGCGTGGCGCCTGGATCCAGAGGAGAGGCCCACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CAA 90 bp | AGTCCGGCCTTGAGTGGGGTCAGGGAAATAGCGTTCTTCAGCCGTTaGGCTCCGGAAGTCCCCTTCCAGGCCCACATCCTCCTTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: SPALSGVREIAFFSR*APEVPFQAHILLGC Trigger: GCATCCAAGGAGGATGTGGGCCTGGAAGGGGACTTCCGGAGCCAAACGGCTGAAGAACGCTATTTCCCTGACCCCACTCAAGGCCGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CAA 90 bp | GAAAGCAGGGCTGGTGGGCTGAGGAAAGACGGACGAAGTCCGGCCTaGAGTGGGGTCAGGGAAATAGCGTTCTTCAGCCGTTTGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ESRAGGLRKDGRSPA*SGVREIAFFSRLAP Trigger: CGGAGCCAAACGGCTGAAGAACGCTATTTCCCTGACCCCACTCAAGGCCGGACTTCGTCCGTCTTTCCTCAGCCCACCAGCCCTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | GCGTCTTCACTGCCACCTTTGTGCTGCAGTTCCATGTaGCCAGCCACACATCTCCAAAGCAGCCGGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: ASSLPPLCCSSM*PATHLQSSRCP Trigger: TGGGCACCGGCTGCTTTGGAGATGTGTGGCTGGGCACATGGAACTGCAGCACAAAGGTGGCAGTGAAGACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CAA 72 bp | GCTGGTGGGCTGAGGAAAGACGGACGAAGTCCGGCCTaGAGTGGGGTCAGGGAAATAGCGTTCTTCAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: AGGLRKDGRSPA*SGVREIAFFSR Trigger: ACGGCTGAAGAACGCTATTTCCCTGACCCCACTCAAGGCCGGACTTCGTCCGTCTTTCCTCAGCCCACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS TCA 72 bp | CTCCGGTCCCTGAGATGCTTCTCATGTTGCCAGTGTTaGGGAAAGCAGGGCTGGTGGGCTGAGGAAAGACGG | + |
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Preference number: 6 (lower is better) Translates to: LRSLRCFSCCQC*GKQGWWAEERR Trigger: CCGTCTTTCCTCAGCCCACCAGCCCTGCTTTCCTCAACACTGGCAACATGAGAAGCATCTCAGGGACCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | CCGGAAGTCCCCTTCCAGGCCCACATCCTCCTTGGATaGAGGCTCCAACTTCTTGCAGAACACACAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: PEVPFQAHILLG*RLQLLAEHTAH Trigger: ATGGGCTGTGTGTTCTGCAAGAAGTTGGAGCCTGCATCCAAGGAGGATGTGGGCCTGGAAGGGGACTTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CCA 72 bp | TTGGTGGTCTCGCTTTCCCGAATGAGAAAGGCCCCCTaGGGGTTACCAGAGGACAGAAGCTGCCTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LVVSLSRMRKAP*GLPEDRSCLSA Trigger: TGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGACCACCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CAA 72 bp | TTGAGTGGGGTCAGGGAAATAGCGTTCTTCAGCCGTTaGGCTCCGGAAGTCCCCTTCCAGGCCCACATCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSGVREIAFFSR*APEVPFQAHIL Trigger: GAGGATGTGGGCCTGGAAGGGGACTTCCGGAGCCAAACGGCTGAAGAACGCTATTTCCCTGACCCCACTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CCA 72 bp | CAGCCTGGATGGAATCCACAGGAGCAACATAGTTGCTaGGAACATAGCCTCTGTGTCCGGAGCTCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: QPGWNPQEQHSC*EHSLCVRSSGS Trigger: GCTCCCTGAGCTCCGGACACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTGTGGATTCCATCCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | CTTCAGCCTGGATGGAATCCACAGGAGCAACATAGTTaGTGGGAACATAGCCTCTGTGTCCGGAGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LQPGWNPQEQHS*WEHSLCVRSSG Trigger: CCCTGAGCTCCGGACACAGAGGCTATGTTCCCAGCAACTATGTTGCTCCTGTGGATTCCATCCAGGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CCA 72 bp | CTGTCCTGGCCTCATAGTCGTACAGGGCGACGAATATaGTCACTCCGGTCCCTGAGATGCTTCTCATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LSWPHSRTGRRI*SLRSLRCFSCC Trigger: GCAACATGAGAAGCATCTCAGGGACCGGAGTGACCATATTCGTCGCCCTGTACGACTATGAGGCCAGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS TCA 72 bp | GTCGTACAGGGCGACGAATATGGTCACTCCGGTCCCTaGGATGCTTCTCATGTTGCCAGTGTTGAGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: VVQGDEYGHSGP*DASHVASVEES Trigger: GCTTTCCTCAACACTGGCAACATGAGAAGCATCTCAGGGACCGGAGTGACCATATTCGTCGCCCTGTACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS GCA 72 bp | AGAAAGGCCCCCTGGGGGTTACCAGAGGACAGAAGCTaGCTCTCTGCATCCTTTCTACTGATCTTTCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: RKAPWGLPEDRS*LSASFLLIFPK Trigger: CTTCGGAAAGATCAGTAGAAAGGATGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CAA 72 bp | CTCAGGGAGCGAGCCTCCCACCAGTCATACTCCGTATaGTTCAGGATGTGGAACTTCTCGCCTTTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LRERASHQSYSV*FRMWNFSPLVK Trigger: CTTCACCAAAGGCGAGAAGTTCCACATCCTGAACAATACGGAGTATGACTGGTGGGAGGCTCGCTCCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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| CDS CCA 72 bp | GCCTCCCACCAGTCATACTCCGTATTGTTCAGGATGTaGAACTTCTCGCCTTTGGTGAAGGTGAGGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ASHQSYSVLFRM*NFSPLVKVRSS Trigger: GGATGACCTCACCTTCACCAAAGGCGAGAAGTTCCACATCCTGAACAATACGGAGTATGACTGGTGGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030693.13 ENSMUST00000171223.2 |
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