Pregenerated sensors for FGL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039899Ensembl transcript IDs: ENSMUST00000035799.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTTaGGCCTCGCACACGAGCTCTGTCCACCAGAGAACTGAGGACATT | + |
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Preference number: 1 (lower is better) Translates to: TEKSRSSPSWDSNAP*ASHTSSVHQRTEDI Trigger: AATGTCCTCAGTTCTCTGGTGGACAGAGCTCGTGTGCGAGGCTCAAGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR CCA 90 bp | CTTAGACGAAAGATAATACTACAGTTCTTGGCTTTCAGTTGTACCTaGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: LRRKIILQFLAFSCT*KDWYILKCVYLALV Trigger: CACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAACTGAAAGCCAAGAACTGTAGTATTATCTTTCGTCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR CCA 90 bp | AACAACATTTGGATCCATTGGAAGTGCAAAGATAAAGTATTTACATaGATTCATTGTTACCCTGAGAAAGACACACTCAGGATGAACACA | + |
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Preference number: 1 (lower is better) Translates to: NNIWIHWKCKDKVFT*IHCYPEKDTLRMNT Trigger: TGTGTTCATCCTGAGTGTGTCTTTCTCAGGGTAACAATGAATCCATGTAAATACTTTATCTTTGCACTTCCAATGGATCCAAATGTTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTCAGAGCCTTTTAATGTaGCCCTTGACATCCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: GAATEKSRSSPSWDSNAPQSLLM*PLTSTS Trigger: ACTTGTGGATGTCAAGGGTCACATTAAAAGGCTCTG...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTCCAGGGACTCACATTTaGCTAAAATTGTATATATTC | + |
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Preference number: 2 (lower is better) Translates to: GAATEKSRSSPSWDSNAPPGTHI*LKLYIF Trigger: GAATATATACAATTTTAGCCAAATGTGAGTCCCTGG...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGTGTCCACCAGAGAACTaGGGACATTTGCTGCGTTAC | + |
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Preference number: 2 (lower is better) Translates to: SWKLHISTYLENLSKSEGCPPEN*GHLLRY Trigger: GTAACGCAGCAAATGTCCTCAGTTCTCTGGTGGACA...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGTTCACAAGAATAAAGTaGGTGAAACTGCCCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SWKLHISTYLENLSKSEGFTRIK*VKLPPE Trigger: CTCTGGGGGCAGTTTCACTCACTTTATTCTTGTGAA...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR GCA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCCATCACAAACCATTGTaGACAGAGAGCAGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YSGYMFESLSSQDNKYPPHHKPL*TESRGR Trigger: TCTCCCTCTGCTCTCTGTGCACAATGGTTTGTGATG...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGATCAGCATATATCAGTaGATTGTTAAGGCTAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SWKLHISTYLENLSKSEGISIYQ*IVKAKD Trigger: GTCCTTAGCCTTAACAATTCACTGATATATGCTGAT...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR CCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGGACAGGCAAATCAACTaGATTCCTAAGAAATTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SWKLHISTYLENLSKSEGDRQIN*IPKKLV Trigger: AACTAATTTCTTAGGAATCCAGTTGATTTGCCTGTC...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR TCA 72 bp | TCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTTaGGCCTCGCACACGAGCTCTGTCCACCAGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: SRSSPSWDSNAP*ASHTSSVHQRT Trigger: AGTTCTCTGGTGGACAGAGCTCGTGTGCGAGGCTCAAGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR TCA 72 bp | ACAGTGCATGTTGTACAGTCAGTTACTCCACGTGACTaGCTGCATGCGGCACTTCAGATTCCACCCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: TVHVVQSVTPRD*LHAALQIPPKS Trigger: GCTCTTGGGTGGAATCTGAAGTGCCGCATGCAGTCAGTCACGTGGAGTAACTGACTGTACAACATGCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR TCA 72 bp | TTGAGCCTCGCACACGAGCTCTGTCCACCAGAGAACTaGGGACATTTGCTGCGTTACTACTTTTCAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LSLAHELCPPEN*GHLLRYYFSER Trigger: TCTCTCTGAAAAGTAGTAACGCAGCAAATGTCCTCAGTTCTCTGGTGGACAGAGCTCGTGTGCGAGGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTAGGATAAAGCAGCTTTaGTATCGCGGTCTAACAGGC | + |
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Preference number: 3 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSRIKQL*YRGLTG Trigger: GCCTGTTAGACCGCGATACAAAAGCTGCTTTATCCT...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR TCA 72 bp | TTAGACAGTGCATGTTGTACAGTCAGTTACTCCACGTaGCTGACTGCATGCGGCACTTCAGATTCCACCCAA | + |
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Preference number: 3 (lower is better) Translates to: LDSACCTVSYST*LTACGTSDSTQ Trigger: TTGGGTGGAATCTGAAGTGCCGCATGCAGTCAGTCACGTGGAGTAACTGACTGTACAACATGCACTGTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR GCA 72 bp | ACGAGCTCTGTCCACCAGAGAACTGAGGACATTTGCTaGGTTACTACTTTTCAGAGAGATGGCTTTCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: TSSVHQRTEDIC*VTTFQRDGFLV Trigger: AACGAGAAAGCCATCTCTCTGAAAAGTAGTAACGCAGCAAATGTCCTCAGTTCTCTGGTGGACAGAGCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR CAA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCTTACATCACAAACCATaGTGCACAGAGAGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: YSGYMFESLSSQDNKYPPLHHKP*CTESRG Trigger: CCCTCTGCTCTCTGTGCACAATGGTTTGTGATGTAA...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR CCA 72 bp | TGGATCCATTGGAAGTGCAAAGATAAAGTATTTACATaGATTCATTGTTACCCTGAGAAAGACACACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: WIHWKCKDKVFT*IHCYPEKDTLR Trigger: CCTGAGTGTGTCTTTCTCAGGGTAACAATGAATCCATGTAAATACTTTATCTTTGCACTTCCAATGGATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR-3UTR CAA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCGACAACAGTATTGCTTaGGGATTAGGATTGGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: YSGYMFESLSSQDNKYPPDNSIA*GLGLAF Trigger: GAAAGCCAATCCTAATCCCAAAGCAATACTGTTGTC...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| 3UTR GCA 72 bp | TTAGAAGCTACACCAAAACTTAAAGATCAAAGTTATTaGTTAGACAGTGCATGTTGTACAGTCAGTTACTCC | + |
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Preference number: 3 (lower is better) Translates to: LEATPKLKDQSY*LDSACCTVSYS Trigger: GGAGTAACTGACTGTACAACATGCACTGTCTAAGCAATAACTTTGATCTTTAAGTTTTGGTGTAGCTTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTAGCTGGAAGGGGCACTaGCTCCCCTCGCACCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSSWKGH*LPSHLP Trigger: CGGGAGGTGCGAGGGGAGCCAGTGCCCCTTCCAGCT...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTCCCTCAGTCAGGTTGTaGTCCTCCACCGCTCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSPSVRL*SSTARQ Trigger: CTGCCGAGCGGTGGAGGAGCACAACCTGACTGAGGG...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTCCATCAAGGCGAGCCTaGAGCACCGTCCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSPSRRA*STVQPP Trigger: TGGAGGCTGGACGGTGCTGCAGGCTCGCCTTGATGG...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTGGGTCCGCACTTCTTTaGGCACCTCCTCCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSGSALL*APPPCC Trigger: GCAGCATGGAGGAGGTGCTCAAAGAAGTGCGGACCC...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGGCGGGGCAGGCAGCCTaGGCGCTGGCATCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGAGQAA*ALASSS Trigger: GCTGGAGGATGCCAGCGCCCAGGCTGCCTGCCCCGC...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTTGCAGCCCCTGGATCTaGTCCTTTGCATTCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPCSPWI*SFAFFS Trigger: GCTGAAGAATGCAAAGGACCAGATCCAGGGGCTGCA...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTTTCATATTTACCAGATaGAGCGTCTCCAGGCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPFIFTR*SVSRRP Trigger: GGGGCGCCTGGAGACGCTCCATCTGGTAAATATGAA...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTCTTTCCACTCTCTGGTaGAGTTGGTGCTGCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPLSTLW*SWCCHQ Trigger: TTGATGGCAGCACCAACTTCACCAGAGAGTGGAAAG...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTATCAAACCACCAGCCTaGGCTGTAATAGAGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPIKPPA*AVIEPT Trigger: TGTGGGCTCTATTACAGCTCAGGCTGGTGGTTTGAT...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTGACAGCTTGTTCACCTaGCTCTCCAGTTCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSDSLFT*LSSSWT Trigger: AGTCCAGGAACTGGAGAGTCAGGTGAACAAGCTGTC...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAATCAGCGTGGGCAGGGTaGGCTGGAAGGGGCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSESAWAG*AGRGTG Trigger: GCCAGTGCCCCTTCCAGCTCACCCTGCCCACGCTGA...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTTCATCTTGGCCTGTTTaGAGGAGGACTTGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSSSWPV*RRTCSH Trigger: GTGGCTACAAGTCCTCCTTCAAACAGGCCAAGATGA...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAAGTCTCCAGGCGCCCCTaGAGCCCCTGGATCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSEVSRRP*SPWIWS Trigger: GGACCAGATCCAGGGGCTGCAGGGGCGCCTGGAGAC...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAAGTGGGCAGGGTGAGCTaGAAGGGGCACTGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSEVGRVS*KGHWLP Trigger: GGGGAGCCAGTGCCCCTTCCAGCTCACCCTGCCCAC...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTCTCTTGGTCAGAAGATaGATTTTATCGTTGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPLLVRR*ILSLPN Trigger: GTTGGGCAACGATAAAATTCATCTTCTGACCAAGAG...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCGCACCTCCTCCATGCTaGCAAGCTGCCGCGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: YSGYMFESLSSQDNKYPPAPPPC*QAAAGA Trigger: AGCTCCCGCGGCAGCTTGGCAGCATGGAGGAGGTGC...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGGTCCTCGGCTGTCTCTaGTCCATTCCCTCCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGVLGCL*SIPSIP Trigger: GGGAATGGAGGGAATGGAGCAGAGACAGCCGAGGAC...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGCCACCTGGCTGTGCCTaGTTTATACCAGGCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGPPGCA*FIPGQV Trigger: CACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGG...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTATTTGCCATTTAAGTTaGCAGAGAGACATGAATCAA | + |
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Preference number: 4 (lower is better) Translates to: GAATEKSRSSPSWDSNAPICHLS*QRDMNQ Trigger: TTGATTCATGTCTCTCTGCCAACTTAAATGGCAAAT...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAACTTCAGACTGTCCACTaGTTCCTTGAGGGTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSELQTVH*FLEGPH Trigger: GTGCGGACCCTCAAGGAAGCAGTGGACAGTCTGAAG...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGCTCTGTCTGGGGTTGTaGAAAACCTCAGGTCATGGT | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGLCLGL*KTSGHG Trigger: ACCATGACCTGAGGTTTTTCACAACCCCAGACAGAG...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCCTCTGTAGGCCCCACTaGTTCTCCTTCCTAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: YSGYMFESLSSQDNKYPPLCRPH*FSFLAR Trigger: ACGTGCTAGGAAGGAGAAGCAGTGGGGCCTACAGAG...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTGATGAATTTTATCGTTaGCCAACCAAAATTCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSDEFYR*PTKILV Trigger: AACGAGAATTTTGGTTGGGCAACGATAAAATTCATC...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGCTTGGCTGGGACACTTaGAACACTTGCCATCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGLGWDT*NTCHPN Trigger: GTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAG...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAATGCATTCTTCAGCTCTaGGGACAGCTTGTTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSECILQL*GQLVHL Trigger: CAGGTGAACAAGCTGTCCTCAGAGCTGAAGAATGCA...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGAGTAGACCTCAAAGCTaGTGTTTCTGTGATCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGSRPQS*CFCDQG Trigger: CCCCTGATCACAGAAACAGCAGCTTTGAGGTCTACT...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR GCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAATTATACCAGGCCAGGTaGCCCAGAAAATCCCATTAC | + |
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Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSELYQAR*PRKSHY Trigger: GTAATGGGATTTTCTGGGGCACCTGGCCTGGTATAA...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CCA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGTGCAACTTACAGTCCTaGCAGGATTTCTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SWKLHISTYLENLSKSEGCNLQS*QDFFRL Trigger: CAGTCTGAAGAAATCCTGCCAGGACTGTAAGTTGCA...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR TCA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAATGCCATCCAAACTGTTaGCCACAACGGTTAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYLEGLVYSQMCIFSPSECHPNC*PQRLDL Trigger: CAAATCTAACCGTTGTGGTCAACAGTTTGGATGGCA...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 90 bp | CCAAGCTGCCGCGGGAGCTGGATGGTCAGCGTGGGCAGGGTGAGCTaGAAGGGGCACTGGCTCCCCTCGCACCTCCCGCTGCCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCRGSWMVSVGRVS*KGHWLPSHLPLPSS Trigger: GCTGGAGGGCAGCGGGAGGTGCGAGGGGAGCCAGTGCCCCTTCCAGCTCACCCTGCCCACGCTGACCATCCAGCTCCCGCGGCAGCTTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 90 bp | ACTTCTTTGAGCACCTCCTCCATGCTGCCAAGCTGCCGCGGGAGCTaGATGGTCAGCGTGGGCAGGGTGAGCTGGAAGGGGCACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSLSTSSMLPSCRGS*MVSVGRVSWKGHWL Trigger: GAGCCAGTGCCCCTTCCAGCTCACCCTGCCCACGCTGACCATCCAGCTCCCGCGGCAGCTTGGCAGCATGGAGGAGGTGCTCAAAGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 90 bp | CACCTGACTCTCCAGTTCCTGGACTCTACTGTCCTCGGCTGTCTCTaGTCCATTCCCTCCATTCCCGCCGGGATCTCGATGGTCGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HLTLQFLDSTVLGCL*SIPSIPAGISMVVS Trigger: GCTGACGACCATCGAGATCCCGGCGGGAATGGAGGGAATGGAGCAGAGACAGCCGAGGACAGTAGAGTCCAGGAACTGGAGAGTCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS TCA 90 bp | GCGCCCCTGCAGCCCCTGGATCTGGTCCTTTGCATTCTTCAGCTCTaGGGACAGCTTGTTCACCTGACTCTCCAGTTCCTGGACTCTACT | + |
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Preference number: 5 (lower is better) Translates to: APLQPLDLVLCILQL*GQLVHLTLQFLDST Trigger: AGTAGAGTCCAGGAACTGGAGAGTCAGGTGAACAAGCTGTCCTCAGAGCTGAAGAATGCAAAGGACCAGATCCAGGGGCTGCAGGGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 90 bp | GCTCCATTCCCTCCATTCCCGCCGGGATCTCGATGGTCGTCAGCCTaGAACTTACAGTCCTGGCAGGATTTCTTCAGACTGTCCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: APFPPFPPGSRWSSA*NLQSWQDFFRLSTA Trigger: AGCAGTGGACAGTCTGAAGAAATCCTGCCAGGACTGTAAGTTGCAGGCTGACGACCATCGAGATCCCGGCGGGAATGGAGGGAATGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTCTGTCCACTGCTTCCTaGAGGGTCCGCACTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAATEKSRSSPSWDSNAPLSTAS*RVRTSL Trigger: CAAAGAAGTGCGGACCCTCAAGGAAGCAGTGGACAG...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 90 bp | TCAATGTTGTTCATATTTACCAGATGGAGCGTCTCCAGGCGCCCCTaGAGCCCCTGGATCTGGTCCTTTGCATTCTTCAGCTCTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMLFIFTRWSVSRRP*SPWIWSFAFFSSED Trigger: GTCCTCAGAGCTGAAGAATGCAAAGGACCAGATCCAGGGGCTGCAGGGGCGCCTGGAGACGCTCCATCTGGTAAATATGAACAACATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 90 bp | CATCATCTTGGCCTGTTTGAAGGAGGACTTGTAGCCACCTGGCTGTaGCTGGTTTATACCAGGCCAGGTGCCCCAGAAAATCCCATTACG | + |
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Preference number: 5 (lower is better) Translates to: HHLGLFEGGLVATWL*LVYTRPGAPENPIT Trigger: CGTAATGGGATTTTCTGGGGCACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGGCTACAAGTCCTCCTTCAAACAGGCCAAGATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 90 bp | CCTAATCATCATCTTGGCCTGTTTGAAGGAGGACTTGTAGCCACCTaGCTGTGCCTGGTTTATACCAGGCCAGGTGCCCCAGAAAATCCC | + |
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Preference number: 5 (lower is better) Translates to: PNHHLGLFEGGLVAT*LCLVYTRPGAPENP Trigger: GGGATTTTCTGGGGCACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGGCTACAAGTCCTCCTTCAAACAGGCCAAGATGATGATTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 90 bp | AGGACTTGTAGCCACCTGGCTGTGCCTGGTTTATACCAGGCCAGGTaGCCCAGAAAATCCCATTACGGACACCTTTGTATTTCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTCSHLAVPGLYQAR*PRKSHYGHLCISGG Trigger: ACCACCAGAAATACAAAGGTGTCCGTAATGGGATTTTCTGGGGCACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGGCTACAAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 90 bp | ATAGAGCCCACAGTTCCCAGAGGGGTACCGATCGTTGTCTCTGTCTaGGGTTGTGAAAAACCTCAGGTCATGGTTGTAGTGTCGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IEPTVPRGVPIVVSV*GCEKPQVMVVVSTE Trigger: TTCAGTCGACACTACAACCATGACCTGAGGTTTTTCACAACCCCAGACAGAGACAACGATCGGTACCCCTCTGGGAACTGTGGGCTCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAAAGCCCCTCAGTCAGGTaGTGCTCCTCCACCGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYLEGLVYSQMCIFSPSESPSVR*CSSTAR Trigger: CCGAGCGGTGGAGGAGCACAACCTGACTGAGGGGCT...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS TCA 90 bp | TGTGTTCTTGGCTGGGACACTTGGAACACTTGCCATCCAAACTGTTaGCCACAACGGTTAGATTTGCCACTTTGTTGTCCACGTAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVLGWDTWNTCHPNC*PQRLDLPLCCPRSS Trigger: AGAACTACGTGGACAACAAAGTGGCAAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAGAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | GGGGCAGCTACTGAAAAATCCAGGTCCAGCCCATCCTGGGATTCTAATGCTCCTTATTTGCCATTTAAGTaGGCAGAGAGACATGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GAATEKSRSSPSWDSNAPYLPFK*AERHES Trigger: TGATTCATGTCTCTCTGCCAACTTAAATGGCAAATA...AGGAGCATTAGAATCCCAGGATGGGCTGGACCTGGATTTTTCAGTAGCTGCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | CTTCAGATTCCACCCAAGAGCACGTTTAAGTGTGCGGCTGGGTTGTTTCTCTCTTATGGCTTGAAATTCTaGGGCCTAATCATCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQIPPKSTFKCAAGLFLSYGLKF*GLIIIL Trigger: CAAGATGATGATTAGGCCCAAGAATTTCAAGCCATA...AGAGAGAAACAACCCAGCCGCACACTTAAACGTGCTCTTGGGTGGAATCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAACACTCTCTGGTGAAGTaGGTGCTGCCATCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LYLEGLVYSQMCIFSPSEHSLVK*VLPSRR Trigger: TCGCCTTGATGGCAGCACCAACTTCACCAGAGAGTG...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGGGACACTTGGAACACTaGCCATCCAAACTGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SWKLHISTYLENLSKSEGGHLEH*PSKLLT Trigger: GGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCC...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TCATGGAAATTGCATATATCCACCTATCTTGAAAACTTATCGAAGAGTGAGGGGGGCCTAATCATCATCTaGGCCTGTTTGAAGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWKLHISTYLENLSKSEGGLIII*ACLKED Trigger: GTCCTCCTTCAAACAGGCCAAGATGATGATTAGGCC...CCCCTCACTCTTCGATAAGTTTTCAAGATAGGTGGATATATGCAATTTCCATGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 90 bp | TACGGACACCTTTGTATTTCTGGTGGTAATATTTGCCATTTAAGTTaGCAGAGAGACATGAATCAAACCACCAGCCTGAGCTGTAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: YGHLCISGGNICHLS*QRDMNQTTSLSCNR Trigger: TCTATTACAGCTCAGGCTGGTGGTTTGATTCATGTCTCTCTGCCAACTTAAATGGCAAATATTACCACCAGAAATACAAAGGTGTCCGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TACAGTGGCTACATGTTTGAAAGTTTAAGTAGTCAAGACAATAAATATCCTCCCTCTTGGCTGGGACACTaGGAACACTTGCCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSGYMFESLSSQDNKYPPSWLGH*EHLPSK Trigger: TTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAGA...GGGAGGATATTTATTGTCTTGACTACTTAAACTTTCAAACATGTAGCCACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS-3UTR CAA 90 bp | TTGTACCTGGAAGGACTGGTATATTCTCAAATGTGTATATTTAGCCCTAGTGAATTGCCATCCAAACTGTaGACCACAACGGTTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LYLEGLVYSQMCIFSPSELPSKL*TTTVRF Trigger: AAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAA...TTCACTAGGGCTAAATATACACATTTGAGAATATACCAGTCCTTCCAGGTACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 72 bp | CTCCCGCTGCCCTCCAGCCTCGCGGGGCAGGCAGCCTaGGCGCTGGCATCCTCCAGCCCCTCAGTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLPSSLAGQAA*ALASSSPSVRL Trigger: CAACCTGACTGAGGGGCTGGAGGATGCCAGCGCCCAGGCTGCCTGCCCCGCGAGGCTGGAGGGCAGCGGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 72 bp | TGCCCTCCAGCCTCGCGGGGCAGGCAGCCTGGGCGCTaGCATCCTCCAGCCCCTCAGTCAGGTTGTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPPASRGRQPGR*HPPAPQSGCAP Trigger: AGGAGCACAACCTGACTGAGGGGCTGGAGGATGCCAGCGCCCAGGCTGCCTGCCCCGCGAGGCTGGAGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 72 bp | GCCTGGGCGCTGGCATCCTCCAGCCCCTCAGTCAGGTaGTGCTCCTCCACCGCTCGGCAGGCAGCGAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: AWALASSSPSVR*CSSTARQAART Trigger: CGTCCTCGCTGCCTGCCGAGCGGTGGAGGAGCACAACCTGACTGAGGGGCTGGAGGATGCCAGCGCCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | TGGGCGCTGGCATCCTCCAGCCCCTCAGTCAGGTTGTaGTCCTCCACCGCTCGGCAGGCAGCGAGGACGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WALASSSPSVRL*SSTARQAARTA Trigger: TGCCGTCCTCGCTGCCTGCCGAGCGGTGGAGGAGCACAACCTGACTGAGGGGCTGGAGGATGCCAGCGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 72 bp | AGCACCTCCTCCATGCTGCCAAGCTGCCGCGGGAGCTaGATGGTCAGCGTGGGCAGGGTGAGCTGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: STSSMLPSCRGS*MVSVGRVSWKG Trigger: CCCCTTCCAGCTCACCCTGCCCACGCTGACCATCCAGCTCCCGCGGCAGCTTGGCAGCATGGAGGAGGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | CGCACTTCTTTGAGCACCTCCTCCATGCTGCCAAGCTaGCGCGGGAGCTGGATGGTCAGCGTGGGCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSLSTSSMLPS*RGSWMVSVGRV Trigger: CACCCTGCCCACGCTGACCATCCAGCTCCCGCGGCAGCTTGGCAGCATGGAGGAGGTGCTCAAAGAAGTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | TCTCTGGTGAAGTTGGTGCTGCCATCAAGGCGAGCCTaGAGCACCGTCCAGCCTCCACCCATGGTCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLVKLVLPSRRA*STVQPPPMVSM Trigger: CATGGAGACCATGGGTGGAGGCTGGACGGTGCTGCAGGCTCGCCTTGATGGCAGCACCAACTTCACCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | CTCCAGTTCCTGGACTCTACTGTCCTCGGCTGTCTCTaGTCCATTCCCTCCATTCCCGCCGGGATCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: LQFLDSTVLGCL*SIPSIPAGISM Trigger: CATCGAGATCCCGGCGGGAATGGAGGGAATGGAGCAGAGACAGCCGAGGACAGTAGAGTCCAGGAACTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 90 bp | GATGGAGCGTCTCCAGGCGCCCCTGCAGCCCCTGGATCTGGTCCTTaGCATTCTTCAGCTCTGAGGACAGCTTGTTCACCTGACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DGASPGAPAAPGSGP*HSSALRTACSPDSP Trigger: TGGAGAGTCAGGTGAACAAGCTGTCCTCAGAGCTGAAGAATGCAAAGGACCAGATCCAGGGGCTGCAGGGGCGCCTGGAGACGCTCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | TTCATATTTACCAGATGGAGCGTCTCCAGGCGCCCCTaGAGCCCCTGGATCTGGTCCTTTGCATTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FIFTRWSVSRRP*SPWIWSFAFFS Trigger: GCTGAAGAATGCAAAGGACCAGATCCAGGGGCTGCAGGGGCGCCTGGAGACGCTCCATCTGGTAAATATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | GGCCTGTTTGAAGGAGGACTTGTAGCCACCTGGCTGTaGCTGGTTTATACCAGGCCAGGTGCCCCAGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GLFEGGLVATWL*LVYTRPGAPEN Trigger: ATTTTCTGGGGCACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGGCTACAAGTCCTCCTTCAAACAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS TCA 72 bp | TTCCAAAGCCGGCTTTGTAGTCTTTCCACTCTCTGGTaGAGTTGGTGCTGCCATCAAGGCGAGCCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FQSRLCSLSTLW*SWCCHQGEPAA Trigger: TGCTGCAGGCTCGCCTTGATGGCAGCACCAACTTCACCAGAGAGTGGAAAGACTACAAAGCCGGCTTTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 72 bp | TCCTGGCAGGATTTCTTCAGACTGTCCACTGCTTCCTaGAGGGTCCGCACTTCTTTGAGCACCTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWQDFFRLSTAS*RVRTSLSTSSM Trigger: CATGGAGGAGGTGCTCAAAGAAGTGCGGACCCTCAAGGAAGCAGTGGACAGTCTGAAGAAATCCTGCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 90 bp | AACTTACAGTCCTGGCAGGATTTCTTCAGACTGTCCACTGCTTCCTaGAGGGTCCGCACTTCTTTGAGCACCTCCTCCATGCTGCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NLQSWQDFFRLSTAS*RVRTSLSTSSMLPS Trigger: GCTTGGCAGCATGGAGGAGGTGCTCAAAGAAGTGCGGACCCTCAAGGAAGCAGTGGACAGTCTGAAGAAATCCTGCCAGGACTGTAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | AGCCACCTGGCTGTGCCTGGTTTATACCAGGCCAGGTaGCCCAGAAAATCCCATTACGGACACCTTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: SHLAVPGLYQAR*PRKSHYGHLCI Trigger: AATACAAAGGTGTCCGTAATGGGATTTTCTGGGGCACCTGGCCTGGTATAAACCAGGCACAGCCAGGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 72 bp | ACCGGCTGTGACTGCATGTGTTCTTGGCTGGGACACTaGGAACACTTGCCATCCAAACTGTTGACCACAACG | + |
|
Preference number: 6 (lower is better) Translates to: TGCDCMCSWLGH*EHLPSKLLTTT Trigger: CGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAGAACACATGCAGTCACAGCCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CCA 72 bp | ACAGTTCCCAGAGGGGTACCGATCGTTGTCTCTGTCTaGGGTTGTGAAAAACCTCAGGTCATGGTTGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVPRGVPIVVSV*GCEKPQVMVVV Trigger: CACTACAACCATGACCTGAGGTTTTTCACAACCCCAGACAGAGACAACGATCGGTACCCCTCTGGGAACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 90 bp | ACCGGCTGTGACTGCATGTGTTCTTGGCTGGGACACTTGGAACACTaGCCATCCAAACTGTTGACCACAACGGTTAGATTTGCCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGCDCMCSWLGHLEH*PSKLLTTTVRFATL Trigger: CAAAGTGGCAAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAGAACACATGCAGTCACAGCCGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS TCA 72 bp | GGCTGGGACACTTGGAACACTTGCCATCCAAACTGTTaGCCACAACGGTTAGATTTGCCACTTTGTTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GWDTWNTCHPNC*PQRLDLPLCCP Trigger: TGGACAACAAAGTGGCAAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 72 bp | TGGCTGGGACACTTGGAACACTTGCCATCCAAACTGTaGACCACAACGGTTAGATTTGCCACTTTGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLGHLEHLPSKL*TTTVRFATLLS Trigger: GGACAACAAAGTGGCAAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS CAA 72 bp | GACTGCATGTGTTCTTGGCTGGGACACTTGGAACACTaGCCATCCAAACTGTTGACCACAACGGTTAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: DCMCSWLGHLEH*PSKLLTTTVRF Trigger: AAATCTAACCGTTGTGGTCAACAGTTTGGATGGCAAGTGTTCCAAGTGTCCCAGCCAAGAACACATGCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | TTTCCTTACTCTTGGTCAGAAGATGAATTTTATCGTTaGCCAACCAAAATTCTCGTTCAAGGTTTCCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPYSWSEDEFYR*PTKILVQGFQS Trigger: GCTTTGGAAACCTTGAACGAGAATTTTGGTTGGGCAACGATAAAATTCATCTTCTGACCAAGAGTAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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| CDS GCA 72 bp | CATTACGGACACCTTTGTATTTCTGGTGGTAATATTTaGCATTTAAGTTGGCAGAGAGACATGAATCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: HYGHLCISGGNI*HLSWQRDMNQT Trigger: GGTTTGATTCATGTCTCTCTGCCAACTTAAATGGCAAATATTACCACCAGAAATACAAAGGTGTCCGTAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035799.6 |
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