Pregenerated sensors for FGL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031594Ensembl transcript IDs: ENSMUST00000034003.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGGTGCACCTGAGCCCTaGGCCTCACCTGCTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGGAPEP*ASPAPA Trigger: TGCGGGAGCAGGTGAGGCTCAGGGCTCAGGTGCACC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTCAAGCTGGTGCACCTaGGCCCTGAGCCTCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGSSWCT*ALSLTC Trigger: GCAGGTGAGGCTCAGGGCTCAGGTGCACCAGCTTGA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTGGTCTGTTGTTGTTTaGCCCGGGTCTCAAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGWSVVV*PGSQAG Trigger: ACCAGCTTGAGACCCGGGTCAAACAACAACAGACCA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCCTCTGTCCCACGTGCTaGACTTCATCCTTTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGLCPTC*TSSFGD Trigger: GTCACCAAAGGATGAAGTTCAGCACGTGGGACAGAG...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCCCATCAGATCGTCTCTaGATTACAGTCCATCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGPSDRL*ITVHPP Trigger: AGGGGGATGGACTGTAATTCAGAGACGATCTGATGG...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAACCACCAGCCAGACTaGTCTTCCTCAGCACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGNHQPD*SSSAQF Trigger: AAACTGTGCTGAGGAAGAGCAGTCTGGCTGGTGGTT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGAATACCACCACCCATaGCAGGTGTACCACACAACA | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGEYHHP*QVYHTT Trigger: TGTTGTGTGGTACACCTGGCATGGGTGGTGGTATTC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAGGATGAAAAGTTCCTaGCAGGGAATCTCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGRMKSS*QGISSC Trigger: ACAGCTGGAGATTCCCTGTCAGGAACTTTTCATCCT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAACTTCATCCTTTGGTaGCTAGCCCACCACTGTACT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGNFILW*LAHHCT Trigger: AGTACAGTGGTGGGCTAGTCACCAAAGGATGAAGTT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTTCAGGTTTGCAGAGTaGCACCTGTTAAACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGFRFAE*HLLNHQ Trigger: CTGGTGGTTTAACAGGTGTCACTCTGCAAACCTGAA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTGGACTTCCTTCTCATaGAAGAGCTGTGCAATCATG | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGWTSFS*KSCAIM Trigger: CATGATTGCACAGCTCTTGCATGAGAAGGAAGTCCA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGAACAATCTGCATACTaGTTCTTGCCTCCAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGEQSAY*FLPPRS Trigger: TGACCTTGGAGGCAAGAAGCAGTATGCAGATTGTTC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGGGAATCTCCAGCTGTaGCAGAATATTCTCCAATAT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGGNLQL*QNILQY Trigger: ATATTGGAGAATATTCTGGCACAGCTGGAGATTCCC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAACACCGTTCAGGTTTaGAGAGTGACACCTGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGNTVQV*RVTPVK Trigger: TTTAACAGGTGTCACTCTGCAAACCTGAACGGTGTT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGGTATTGTGCGAAGCTaGTGTTTTTCTCAAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGGIVRS*CFSQNL Trigger: CAGATTTTGAGAAAAACAGCAGCTTCGCACAATACC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCCCAACTTTAAAACTTTaGTATTGTGCGAAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGPTLKL*YCAKLL Trigger: CAGCAGCTTCGCACAATACCAAAGTTTTAAAGTTGG...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGTCATTGTAAATCTCTaGACAATCTGCATACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGVIVNL*TICILL Trigger: AAGCAGTATGCAGATTGTTCAGAGATTTACAATGAC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAAAACTTTGGTATTGTaGGAAGCTGCTGTTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGKTLVL*EAAVFL Trigger: GAGAAAAACAGCAGCTTCGCACAATACCAAAGTTTT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTATTCGCCATTGTTTTaGACAAAGTTTCCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IYFQVNQDELQKGDPNEGYSPLF*TKFPKP Trigger: TGGCTTTGGAAACTTTGTCCAAAACAATGGCGAATA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS GCA 90 bp | CCACCACCCATGCCAGGTGTACCACACAACACCATTATCCGTTTCTaGCCTGTAGGAACCACGGTAGTAAACACCGTTCAGGTTTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PPPMPGVPHNTIIRF*PVGTTVVNTVQVCR Trigger: TCTGCAAACCTGAACGGTGTTTACTACCGTGGTTCCTACAGGGCAGAAACGGATAATGGTGTTGTGTGGTACACCTGGCATGGGTGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS GCA 90 bp | CGATCCTTTATCCAGAAACTGGACTTCCTTCTCATGCAAGAGCTGTaGAATCATGGTCTGTTGTTGTTTGACCCGGGTCTCAAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RSFIQKLDFLLMQEL*NHGLLLFDPGLKLV Trigger: CACCAGCTTGAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAGGAAGTCCAGTTTCTGGATAAAGGATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS TCA 90 bp | AAATCTCTGAACAATCTGCATACTGCTTCTTGCCTCCAAGGTCAATaGAACTGTTCTCCGATCCTTTATCCAGAAACTGGACTTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KSLNNLHTASCLQGQ*NCSPILYPETGLPS Trigger: AGAAGGAAGTCCAGTTTCTGGATAAAGGATCGGAGAACAGTTTCATTGACCTTGGAGGCAAGAAGCAGTATGCAGATTGTTCAGAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCATGGTCTGTTGTTGTTaGACCCGGGTCTCAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGMVCCC*TRVSSW Trigger: CCAGCTTGAGACCCGGGTCAAACAACAACAGACCAT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGCTGAACTTCATCCTTaGGTGACTAGCCCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGAELHP*VTSPPL Trigger: CAGTGGTGGGCTAGTCACCAAAGGATGAAGTTCAGC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCTGCAATCATGGTCTGTaGTTGTTTGACCCGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGCNHGL*LFDPGL Trigger: GAGACCCGGGTCAAACAACAACAGACCATGATTGCA...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAATCATGGTCTGTTGTaGTTTGACCCGGGTCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGNHGLL*FDPGLK Trigger: CTTGAGACCCGGGTCAAACAACAACAGACCATGATT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCGTATTCGCCATTGTTTaGGACAAAGTTTCCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGVFAIV*DKVSKA Trigger: GGCTTTGGAAACTTTGTCCAAAACAATGGCGAATAC...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAGCCAGTATTCGCCATaGTTTTGGACAAAGTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGSQYSP*FWTKFP Trigger: TGGAAACTTTGTCCAAAACAATGGCGAATACTGGCT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCCTCAGCACAGTTTCCTaGGTAATTGTCGTTATCTCT | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGLSTVS*VIVVIS Trigger: AGAGATAACGACAATTACCAAGGAAACTGTGCTGAG...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTCAAGTAAACCAAGATGAATTACAGAAAGGAGATCCCAATGAGGGCAGCAAGTTAATGTTTTaGTTACCCAGCCAGTATTCG | + |
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Preference number: 5 (lower is better) Translates to: IYFQVNQDELQKGDPNEGSKLMF*LPSQYS Trigger: CGAATACTGGCTGGGTAACAAAAACATTAACTTGCT...GCCCTCATTGGGATCTCCTTTCTGTAATTCATCTTGGTTTACTTGAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS CAA 90 bp | CTGGACTTCCTTCTCATGCAAGAGCTGTGCAATCATGGTCTGTTGTaGTTTGACCCGGGTCTCAAGCTGGTGCACCTGAGCCCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LDFLLMQELCNHGLL*FDPGLKLVHLSPEP Trigger: AGGCTCAGGGCTCAGGTGCACCAGCTTGAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAGGAAGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS CAA 72 bp | CTTCTCATGCAAGAGCTGTGCAATCATGGTCTGTTGTaGTTTGACCCGGGTCTCAAGCTGGTGCACCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLMQELCNHGLL*FDPGLKLVHLS Trigger: GCTCAGGTGCACCAGCTTGAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS CAA 90 bp | AAACTGGACTTCCTTCTCATGCAAGAGCTGTGCAATCATGGTCTGTaGTTGTTTGACCCGGGTCTCAAGCTGGTGCACCTGAGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KLDFLLMQELCNHGL*LFDPGLKLVHLSPE Trigger: CTCAGGGCTCAGGTGCACCAGCTTGAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAGGAAGTCCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS CAA 72 bp | TTCCTTCTCATGCAAGAGCTGTGCAATCATGGTCTGTaGTTGTTTGACCCGGGTCTCAAGCTGGTGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: FLLMQELCNHGL*LFDPGLKLVHL Trigger: CAGGTGCACCAGCTTGAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS GCA 72 bp | ATGCCAGGTGTACCACACAACACCATTATCCGTTTCTaGCCTGTAGGAACCACGGTAGTAAACACCGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: MPGVPHNTIIRF*PVGTTVVNTVQ Trigger: CTGAACGGTGTTTACTACCGTGGTTCCTACAGGGCAGAAACGGATAATGGTGTTGTGTGGTACACCTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS TCA 72 bp | CCCCTGTTAAAGTTCTCACTGCCATCAGATCGTCTCTaGATTACAGTCCATCCCCCTCCATCAGACATGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLLKFSLPSDRL*ITVHPPPSDMS Trigger: TGACATGTCTGATGGAGGGGGATGGACTGTAATTCAGAGACGATCTGATGGCAGTGAGAACTTTAACAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS TCA 72 bp | ACTAGCCCACCACTGTACTTCAGGATGAAAAGTTCCTaGCAGGGAATCTCCAGCTGTGCCAGAATATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSPPLYFRMKSS*QGISSCARIFS Trigger: GGAGAATATTCTGGCACAGCTGGAGATTCCCTGTCAGGAACTTTTCATCCTGAAGTACAGTGGTGGGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS GCA 72 bp | ATCCAGAAACTGGACTTCCTTCTCATGCAAGAGCTGTaGAATCATGGTCTGTTGTTGTTTGACCCGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: IQKLDFLLMQEL*NHGLLLFDPGL Trigger: GAGACCCGGGTCAAACAACAACAGACCATGATTGCACAGCTCTTGCATGAGAAGGAAGTCCAGTTTCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS TCA 72 bp | AACAATCTGCATACTGCTTCTTGCCTCCAAGGTCAATaGAACTGTTCTCCGATCCTTTATCCAGAAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: NNLHTASCLQGQ*NCSPILYPETG Trigger: TCCAGTTTCTGGATAAAGGATCGGAGAACAGTTTCATTGACCTTGGAGGCAAGAAGCAGTATGCAGATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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| CDS CAA 72 bp | AATGTTTTTGTTACCCAGCCAGTATTCGCCATTGTTTaGGACAAAGTTTCCAAAGCCATTTTCATAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: NVFVTQPVFAIV*DKVSKAIFIVI Trigger: AATGACTATGAAAATGGCTTTGGAAACTTTGTCCAAAACAATGGCGAATACTGGCTGGGTAACAAAAACATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034003.5 |
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