Pregenerated sensors for FGGY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028573Ensembl transcript IDs: ENSMUST00000043335.11, ENSMUST00000079223.11, ENSMUST00000107091.11, ENSMUST00000130541.8, ENSMUST00000131654.9, ENSMUST00000134012.9, ENSMUST00000142384.2, ENSMUST00000143742.3, ENSMUST00000150830.2, ENSMUST00000156223.2, ENSMUST00000177394.8
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCAATTCCTGAAGGAAGACCCAGCTCTCTGGCTGCTTCTGGTGTaGGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LQFLKEDPALWLLLV*AQFQEQLQEATRGF Trigger: GAAACCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCAGCCAGAGAGCTGGGTCTTCCTTCAGGAATTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131654.9 ENSMUST00000143742.3 |
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| 3UTR TCA 90 bp | CAGTCCAATCATCTTCCAGAAGCTGTCATCCCAACCTTTCTCTGCTaGGTATGTCCATTTGCACACCAAGGAGCAGAGAGACCGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: QSNHLPEAVIPTFLC*VCPFAHQGAERPCC Trigger: ACAGCACGGTCTCTCTGCTCCTTGGTGTGCAAATGGACATACTCAGCAGAGAAAGGTTGGGATGACAGCTTCTGGAAGATGATTGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR GCA 90 bp | ATCAGCATGTTCCGGAAACACGACTTTCCCCACTTTGCTCATCCTTaGCATTGCCTCCTGAAGGTGAAGCACTACCAGAACTTCCTTCGT | + |
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Preference number: 1 (lower is better) Translates to: ISMFRKHDFPHFAHP*HCLLKVKHYQNFLR Trigger: ACGAAGGAAGTTCTGGTAGTGCTTCACCTTCAGGAGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGTGTTTCCGGAACATGCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
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| 3UTR CCA 90 bp | ATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGTTTCCTAGAAAATaGCAGAAGGCATGCTGGCACAAAGACTCTTCCTATGGCAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: IPRAAPGSNTRFPRK*QKACWHKDSSYGSK Trigger: CTTGCTGCCATAGGAAGAGTCTTTGTGCCAGCATGCCTTCTGCCATTTTCTAGGAAACCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR TCA 90 bp | AATGGCACAGCGTCTGTACGGACAGGTATGTTCAGCTTCCATTCATaGTTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: NGTASVRTGMFSFHS*LLNTPSGAQPFSET Trigger: TGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTCCGTACAGACGCTGTGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR TCA 90 bp | CAGCGTCTGTACGGACAGGTATGTTCAGCTTCCATTCATGATTGCTaGATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTTGATA | + |
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Preference number: 1 (lower is better) Translates to: QRLYGQVCSASIHDC*ILLLVLNHSQKHLI Trigger: TATCAAGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTCCGTACAGACGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR CCA 90 bp | CTTGGGAGTGAAAACAGTGCAAGTTTCAGATACTGTTTTCTATCCTaGCTACAGTTAGCCTCTCTGAATGTCTATTTCCTGTTCATTATG | + |
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Preference number: 1 (lower is better) Translates to: LGSENSASFRYCFLS*LQLASLNVYFLFIM Trigger: CATAATGAACAGGAAATAGACATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTGTTTTCACTCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| 3UTR-3UTR GCA 90 bp | CCTGCATGGGCATCAATGAGTGAGGCTGCCACTGCAATTCCTGAAGGAAGACCCGGAGCAGAGAGACCGTaGTGTGACACCTGTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PAWASMSEAATAIPEGRPGAERP*CDTCCL Trigger: AAGGCAACAGGTGTCACAGCACGGTCTCTCTGCTCC...GGGTCTTCCTTCAGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTGCCACTGCAATTCCTGAAGGAAGACCCAGCTCTCTGGCTGCTTCTGGTTGGCAGAAGGCATGCTaGCACAAAGACTCTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: EAATAIPEGRPSSLAASGWQKAC*HKDSSY Trigger: ATAGGAAGAGTCTTTGTGCCAGCATGCCTTCTGCCA...ACCAGAAGCAGCCAGAGAGCTGGGTCTTCCTTCAGGAATTGCAGTGGCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGGCTGAATACTCCTTCTaGTGCTCAACCATTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: EHKMNTQRAPVNGTASVRAEYSF*CSTILR Trigger: TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGC...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTGGTGTGAGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGTTAGGTTTCCTAGAAAATaGCAGAAGGCATGCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CFWCEPNSKSSSRKQHEVRFPRK*QKACWH Trigger: GTGCCAGCATGCCTTCTGCCATTTTCTAGGAAACCT...AACCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR CAA 90 bp | TATCAGCATGTTCCGGAAACACGACTTTCCCCACTTTGCTCATCCTaGCCATTGCCTCCTGAAGGTGAAGCACTACCAGAACTTCCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: YQHVPETRLSPLCSS*PLPPEGEALPELPS Trigger: CGAAGGAAGTTCTGGTAGTGCTTCACCTTCAGGAGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGTGTTTCCGGAACATGCTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCATTCAACCAGAACCCAGGGACCATGGCTGAATAATAAGGTCCCCAGACACCCCCATGTGACAAGATaGTGTTCCACAGATGACAGC | + |
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Preference number: 2 (lower is better) Translates to: LHSTRTQGPWLNNKVPRHPHVTR*CSTDDS Trigger: GCTGTCATCTGTGGAACATCATCTTGTCACATGGGG...GTGTCTGGGGACCTTATTATTCAGCCATGGTCCCTGGGTTCTGGTTGAATGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCCTGCACCATATGGTCTATCAATTTTCCAGTCACACTCTGACCACCTTCTCTCTGGCTGCTTCTaGTGTGAGCCCAATTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: DGPAPYGLSIFQSHSDHLLSGCF*CEPNSK Trigger: CTTGGAATTGGGCTCACACCAGAAGCAGCCAGAGAG...AAGGTGGTCAGAGTGTGACTGGAAAATTGATAGACCATATGGTGCAGGGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCCTGCACCATATGGTCTATCAATTTTCCAGTCACACTCTGACCACCTTCATGATGTTCCACAGATaGCAGCCAGCCTTGACGTCA | + |
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Preference number: 2 (lower is better) Translates to: MALHHMVYQFSSHTLTTFMMFHR*QPALTS Trigger: TGACGTCAAGGCTGGCTGTCATCTGTGGAACATCAT...GAAGGTGGTCAGAGTGTGACTGGAAAATTGATAGACCATATGGTGCAGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTTCTGGTGTGAGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGCATATACCAGATTCTTaGAGAATACAGCTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AASGVSPIPRAAPGSNTRHIPDS*RIQLSS Trigger: ACTTGAGAGCTGTATTCTGCAAGAATCTGGTATATG...CCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR-3UTR CCA 90 bp | GATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGGAGGGCCCCAGTGAATaGCACAGCGTCTGTACGGAC | + |
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Preference number: 2 (lower is better) Translates to: DNKTGMPKLYPRGTEHKMEGPSE*HSVCTD Trigger: GTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTC...CATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGAACAAAGCATGGGCAATaGCCACAGGAGGTTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SLARESGENEPSKALNQRTKHGQ*PQEVSS Trigger: GCTGCTAACCTCCTGTGGGCATTGCCCATGCTTTGT...TCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTCCTCCTGCATGGGCATCAATGAGTGAGGCTGCCACTGCAATTCCTGAACAAAGACTCTTCCTATaGCAGCAAGAGACTACATAT | + |
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Preference number: 2 (lower is better) Translates to: PSPPAWASMSEAATAIPEQRLFL*QQETTY Trigger: ATATGTAGTCTCTTGCTGCCATAGGAAGAGTCTTTG...TTCAGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGGAGGACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR-3UTR GCA 90 bp | GACAGGTATGTTCAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCACACTTTGCTCATCCTTaGCATTGCCTCCTGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DRYVQLPFMIAEYSFWCSHFAHP*HCLLKV Trigger: CACCTTCAGGAGGCAATGGCAAGGATGAGCAAAGTG...TGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACATCCATTCATGATTGCTaGATACTCCTTCTGGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTSIHDC*ILLLVL Trigger: GAGCACCAGAAGGAGTATTCAGCAATCATGAATGGA...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACAGCTGAATACTCCTTCTaGTGCTCAACCATTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTAEYSF*CSTILR Trigger: TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGC...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR TCA 72 bp | CTTGACGTCACTGGCTGTCCCTCACAGGTAAGCCCGTaGCCTCTCACATCTGCCCCAATCACTCCTAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LDVTGCPSQVSP*PLTSAPITPSP Trigger: AGGACTAGGAGTGATTGGGGCAGATGTGAGAGGTCACGGGCTTACCTGTGAGGGACAGCCAGTGACGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTCCTGCATGGGCATCAATGAGTGAGGCTGCCACTGCAATTCCTGAAGGATCAGCCACAGGAGCTTaGGAGCCTGCATCTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: SPPAWASMSEAATAIPEGSATGA*EPASPQ Trigger: CTGTGGAGATGCAGGCTCCAAAGCTCCTGTGGCTGA...TCCTTCAGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR TCA 72 bp | CTGAAGGAAGACCCAGCTCTCTGGCTGCTTCTGGTGTaGGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACA | + |
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Preference number: 3 (lower is better) Translates to: LKEDPALWLLLV*AQFQEQLQEAT Trigger: TGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCAGCCAGAGAGCTGGGTCTTCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000131654.9 ENSMUST00000143742.3 |
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| 3UTR CCA 72 bp | CTCACATCTGCCCCAATCACTCCTAGTCCTCCTGCATaGGCATCAATGAGTGAGGCTGCCACTGCAATTCCT | + |
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Preference number: 3 (lower is better) Translates to: LTSAPITPSPPA*ASMSEAATAIP Trigger: AGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGGAGGACTAGGAGTGATTGGGGCAGATGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR CCA 72 bp | GCTGTGGCCTTGGCTTGTAGTTCAGGAAAGGCAGGATaGCCCTGCACCATATGGTCTATCAATTTTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: AVALACSSGKAG*PCTIWSINFPV Trigger: GACTGGAAAATTGATAGACCATATGGTGCAGGGCCATCCTGCCTTTCCTGAACTACAAGCCAAGGCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR-3UTR CAA 90 bp | GTGAGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGTTTCCTATTTTGGCTGAGTATGTCCATTaGCACACCAAGGAGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VSPIPRAAPGSNTRFPILAEYVH*HTKEQR Trigger: TCTCTGCTCCTTGGTGTGCAAATGGACATACTCAGC...CAAAATAGGAAACCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| 3UTR CCA 72 bp | GCAGCTCCAGGAAGCAACACGAGGTTTCCTAGAAAATaGCAGAAGGCATGCTGGCACAAAGACTCTTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: AAPGSNTRFPRK*QKACWHKDSSY Trigger: ATAGGAAGAGTCTTTGTGCCAGCATGCCTTCTGCCATTTTCTAGGAAACCTCGTGTTGCTTCCTGGAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR-3UTR CAA 90 bp | CCTAGTCCTCCTGCATGGGCATCAATGAGTGAGGCTGCCACTGCAATTCCTGAAACATATACCAGATTCTaGCAGAATACAGCTCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: PSPPAWASMSEAATAIPETYTRF*QNTALK Trigger: CTTGAGAGCTGTATTCTGCAAGAATCTGGTATATGT...TTCAGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGGAGGACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR GCA 72 bp | TCCTATGGCAGCAAGAGACTACATATACCAGATTCTTaGAGAATACAGCTCTCAAGTCCTCCCAGCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: SYGSKRLHIPDS*RIQLSSPPSWT Trigger: TGTCCAGCTGGGAGGACTTGAGAGCTGTATTCTGCAAGAATCTGGTATATGTAGTCTCTTGCTGCCATAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR CCA 72 bp | ATGGCAGAAGGCATGCTGGCACAAAGACTCTTCCTATaGCAGCAAGAGACTACATATACCAGATTCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: MAEGMLAQRLFL*QQETTYTRFLQ Trigger: CTGCAAGAATCTGGTATATGTAGTCTCTTGCTGCCATAGGAAGAGTCTTTGTGCCAGCATGCCTTCTGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
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| 3UTR TCA 72 bp | TACGGACAGGTATGTTCAGCTTCCATTCATGATTGCTaGATACTCCTTCTGGTGCTCAACCATTCTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: YGQVCSASIHDC*ILLLVLNHSQK Trigger: TTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTCCGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| 3UTR CCA 72 bp | GAAAACAGTGCAAGTTTCAGATACTGTTTTCTATCCTaGCTACAGTTAGCCTCTCTGAATGTCTATTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: ENSASFRYCFLS*LQLASLNVYFL Trigger: CAGGAAATAGACATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR TCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGTCACAGGTAAGCCCGTaGCCTCTCACATCTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRSQVSP*PLTSAP Trigger: TGGGGCAGATGTGAGAGGTCACGGGCTTACCTGTGA...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR TCA 90 bp | CATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGATGACAGCCAGCCTTaGCGTCACTGGCTGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: HKMNTQRAPVNGTASVRTDDSQP*RHWLSL Trigger: GAGGGACAGCCAGTGACGTCAAGGCTGGCTGTCATC...TGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR CCA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTAAAAGGAGCCCTCTCTaGTCCACTAGAGCCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: KMNTQRAPVNGTASVRTGKRSPL*STRAAR Trigger: CCGTGCGGCTCTAGTGGACCAGAGAGGGCTCCTTTT...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR TCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGAGAAGTGAAGTCCCCTaGGGCACAGGCACCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRRSEVP*GTGTQN Trigger: ATTCTGGGTGCCTGTGCCTCAGGGGACTTCACTTCT...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 ENSMUST00000142384.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACCTCCTGCACAGAAGTaGAGTCCCCTGAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVPPAQK*SPLRHR Trigger: CCTGTGCCTCAGGGGACTTCACTTCTGTGCAGGAGG...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR TCA 90 bp | TTCCGGAAACACGACTTTCCCCACTTTGCTCATCCTTGCCATTGCCTCCTGAAGCAGGCTGCACAGAAGTaGAGTCCCCTGAGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: FRKHDFPHFAHPCHCLLKQAAQK*SPLRHR Trigger: CCTGTGCCTCAGGGGACTTCACTTCTGTGCAGCCTG...CTTCAGGAGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGTGTTTCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
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| CDS-3UTR CCA 90 bp | CAAGATGATGTTCCACAGATGACAGCCAGCCTTGACGTCACTGGCTGTCCCTCATGGCTGACAGCCCGGTaGTCCAGCCACATGATAACG | + |
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Preference number: 4 (lower is better) Translates to: QDDVPQMTASLDVTGCPSWLTAR*SSHMIT Trigger: CGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCA...TGAGGGACAGCCAGTGACGTCAAGGCTGGCTGTCATCTGTGGAACATCATCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| CDS-3UTR TCA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTACACCACCCACATACTaGAGGACTCTGTGCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KMNTQRAPVNGTASVRTGTPPTY*RTLCLV Trigger: GACCAAGCACAGAGTCCTTCAGTATGTGGGTGGTGT...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR TCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAAGACTCCACCTCTTGTaGCAGGACCACAGGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVRLHLL*QDHRHA Trigger: GGCATGCCTGTGGTCCTGTCACAAGAGGTGGAGTCT...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR TCA 90 bp | TCTTCCAGTCCAATCATCTTCCAGAAGCTGTCATCCCAACCTTTCTCTGCTGAGGAGGAGTCCCCTTTGTaGCAAGGCAGCATGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSSPIIFQKLSSQPFSAEEESPL*QGSMPP Trigger: GGGCGGCATGCTGCCTTGTCACAAAGGGGACTCCTC...CTCAGCAGAGAAAGGTTGGGATGACAGCTTCTGGAAGATGATTGGACTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
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| CDS-3UTR GCA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGCTTGCCATTGCCTCCTaGACAGAAGTGAAGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: MNTQRAPVNGTASVRTGMLAIAS*TEVKSP Trigger: AGGGGACTTCACTTCTGTGCAGGAGGCAATGGCAAG...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAAGAGAGACCGTGCTGTaGCACCTGTTGCCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVRETVL*HLLPSM Trigger: CATGGAAGGCAACAGGTGTCACAGCACGGTCTCTCT...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGCACATAGTAGCGACTTaGTTCCTGGTCTCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRHIVAT*FLVSAR Trigger: TCTGGCAGAGACCAGGAACCAAGTCGCTACTATGTG...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGTGGCCAGGTAGAGGATaGCAAGATCATCAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRWPGRG*QDHQGP Trigger: AGGACCTTGATGATCTTGCCATCCTCTACCTGGCCA...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGTGGCCAGGTAGAGGATaGCAAGATCATCAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MNTQRAPVNGTASVRTGMWPGRG*QDHQGP Trigger: AGGACCTTGATGATCTTGCCATCCTCTACCTGGCCA...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGGAGTCCCAAAAGCAATaGCTTGAACAGTGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRESQKQ*LEQWPG Trigger: ACCTGGCCACTGTTCAAGCCATTGCTTTTGGGACTC...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGCCAACCTTTCTCTGCTaGGTATGTCCATTTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MNTQRAPVNGTASVRTGMPTFLC*VCPFAH Trigger: GTGTGCAAATGGACATACTCAGCAGAGAAAGGTTGG...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTATGCCACTGCAATTCCTaGAGGAAGACCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVCHCNS*RKTQLS Trigger: AGAGAGCTGGGTCTTCCTTCAGGAATTGCAGTGGCA...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGTTGCTGATCCCCATGTaGCAAGATGATGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MNTQRAPVNGTASVRTGMLLIPM*QDDVPQ Trigger: CTGTGGAACATCATCTTGTCACATGGGGATCAGCAA...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGACACTGGATCTTTGCTaGTCCCCATGTGACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MNTQRAPVNGTASVRTGMTLDLC*SPCDKM Trigger: CATCTTGTCACATGGGGATCAGCAAAGATCCAGTGT...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTACACTGGATCTTTGCTaGTCCCCATGTGACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KMNTQRAPVNGTASVRTGTLDLC*SPCDKM Trigger: CATCTTGTCACATGGGGATCAGCAAAGATCCAGTGT...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAAGGAAACCCACAGGCTaGGCCTTCTTAATCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: HKMNTQRAPVNGTASVRTRKPTG*AFLIRS Trigger: GGATCTGATTAAGAAGGCTCAGCCTGTGGGTTTCCT...TGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | TTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATAGAAGTGAAGTCCCCTaGGGCACAGGCACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LYPRGTEHKMNTQRAPVNRSEVP*GTGTQN Trigger: ATTCTGGGTGCCTGTGCCTCAGGGGACTTCACTTCT...ATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 ENSMUST00000142384.2 |
||
| CDS-3UTR GCA 90 bp | AAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGGGAGCAGAGAGACCGTaGTGTGACACCTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLYPRGTEHKMNTQRAPVGAERP*CDTCCL Trigger: AAGGCAACAGGTGTCACAGCACGGTCTCTCTGCTCC...CACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTGAGAGAGTGCCCTGCTaGCTCCATTGTTTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KMNTQRAPVNGTASVRTGERVPC*LHCFND Trigger: ATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTC...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTATCAGGAAAGGCAGGATaGCCCTGCACCATATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVSGKAG*PCTIWS Trigger: AGACCATATGGTGCAGGGCCATCCTGCCTTTCCTGA...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTGGTGTGAGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGTTCCAACCTTTCTCTGCTaGGTATGTCCATTTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CFWCEPNSKSSSRKQHEVPTFLC*VCPFAH Trigger: GTGTGCAAATGGACATACTCAGCAGAGAAAGGTTGG...AACCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAAGGAAACCCACAGGCTaGGCCTTCTTAATCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVRKPTG*AFLIRS Trigger: GGATCTGATTAAGAAGGCTCAGCCTGTGGGTTTCCT...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTTCCATTCATGATTGCTaGATACTCCTTCTGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KMNTQRAPVNGTASVRTGSIHDC*ILLLVL Trigger: GAGCACCAGAAGGAGTATTCAGCAATCATGAATGGA...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGCACTTCTTAATTGGCTaGTCTGCGAAAGCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVRHFLIG*SAKAKR Trigger: CCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTG...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | CATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAAAGGCAGGATGGCCCTaGACCATATGGTCTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HKMNTQRAPVNGTASVRTKAGWP*TIWSIN Trigger: ATTGATAGACCATATGGTGCAGGGCCATCCTGCCTT...TGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCAGGACTCAGCAGGCTaGACAGAAGTGAAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRAQDSAG*TEVKSP Trigger: AGGGGACTTCACTTCTGTGCAGCCTGCTGAGTCCTG...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
||
| CDS-3UTR CCA 90 bp | AGCATGGGCAATGCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTTGGCTGACAGCCCGGTaGTCCAGCCACATGATAACG | + |
|
Preference number: 4 (lower is better) Translates to: SMGNAHRRLAARILLPIFWLTAR*SSHMIT Trigger: CGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCA...AAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGCATTGCCCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | AAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGTCAGGAAAGGCAGGATaGCCCTGCACCATATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLYPRGTEHKMNTQRAPVSGKAG*PCTIWS Trigger: AGACCATATGGTGCAGGGCCATCCTGCCTTTCCTGA...CACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAATCTGGCTGTGGCCTTaGCTTGTAGTTCAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVIWLWP*LVVQER Trigger: CCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAT...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | AAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGTCTGGCATCTGGCTGTaGCCTTGGCTTGTAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLYPRGTEHKMNTQRAPVSGIWL*PWLVVQ Trigger: CTGAACTACAAGCCAAGGCCACAGCCAGATGCCAGA...CACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACAATGGCTTGAACAGTaGCCAGGTAGAGGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVQWLEQ*PGRGWQ Trigger: TTGCCATCCTCTACCTGGCCACTGTTCAAGCCATTG...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTCCTCCTGCATGGGCATCAATGAGTGAGGCTGCCACTGCAATTCCTGAATCGTGGTGGTTGAATTaGGGCTCCCACTTCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPAWASMSEAATAIPESWWLN*GSHFLI Trigger: AATTAAGAAGTGGGAGCCTCAATTCAACCACCACGA...TTCAGGAATTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAGGAGGACTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
||
| CDS-3UTR TCA 90 bp | AGCATGGGCAATGCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTAGAGAGACCGTGCTGTaGCACCTGTTGCCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SMGNAHRRLAARILLPIFRETVL*HLLPSM Trigger: CATGGAAGGCAACAGGTGTCACAGCACGGTCTCTCT...AAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGCATTGCCCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AGTTCACTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAATCACAGGTAAGCCCGTaGCCTCTCACATCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLARESGENEPSKALNQSQVSP*PLTSAP Trigger: TGGGGCAGATGTGAGAGGTCACGGGCTTACCTGTGA...TTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAGTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | CAGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAAGATGACAGCCAGCCTTaGCGTCACTGGCTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCKFQILFSILATVSLSEDDSQP*RHWLSL Trigger: GAGGGACAGCCAGTGACGTCAAGGCTGGCTGTCATC...TTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAGATCATCAAGGTCCTaGGACAGCGTCAATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLYPRGTEHKMNTQRAPVRSSRS*DSVNPV Trigger: CACTGGATTGACGCTGTCTCAGGACCTTGATGATCT...CACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGAACCAAAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCGGAGCAGAGAGACCGTaGTGTGACACCTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKIPKMDQKTSERQSGAERP*CDTCCL Trigger: AAGGCAACAGGTGTCACAGCACGGTCTCTCTGCTCC...GCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTTTGGTTCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCAGGGTACTGAGAGAGTaGCCTGCTGCCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRARVLRE*PAASIV Trigger: AACAATGGAGGCAGCAGGGCACTCTCTCAGTACCCT...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGGAATACTCCTTCTGGTaGTCAACCATTCTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EHKMNTQRAPVNGTASVREYSFW*STILRN Trigger: GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTC...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCAATGCCCTCTCTGGCTGCTTCTaGTGTGAGCCCAATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKMDQKTSERQSMGNALSGCF*CEPNSK Trigger: CTTGGAATTGGGCTCACACCAGAAGCAGCCAGAGAG...GGCATTGCCCATGCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | AAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAGAACCCAGGGACCATaGCTGAATAATAAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLYPRGTEHKMNTQRAPVRTQGP*LNNKVP Trigger: GGGGACCTTATTATTCAGCCATGGTCCCTGGGTTCT...CACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCTCTGGCATCTGGCTGTaGCCTTGGCTTGTAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRASGIWL*PWLVVQ Trigger: CTGAACTACAAGCCAAGGCCACAGCCAGATGCCAGA...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| 3UTR CAA 72 bp | GAAACACGACTTTCCCCACTTTGCTCATCCTTGCCATaGCCTCCTGAAGGTGAAGCACTACCAGAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETRLSPLCSSLP*PPEGEALPELP Trigger: AGGAAGTTCTGGTAGTGCTTCACCTTCAGGAGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCTGAACCAAAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCATCAATGAGTaGGGCTGCCACTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKIPKMDQKTSERQSMGINE*GCHCNS Trigger: GGAATTGCAGTGGCAGCCTCACTCATTGATGCCCAT...GCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTTTGGTTCAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | GAACCAAAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCATGATGTTCCACAGATaGCAGCCAGCCTTGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPKIPKMDQKTSERQSMGMMFHR*QPALTS Trigger: TGACGTCAAGGCTGGCTGTCATCTGTGGAACATCAT...GCCCATGCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTTTGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | TTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATCATGTAAATCAACAGTaGGGAAACCCACAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYPRGTEHKMNTQRAPVNHVNQQ*GNPQAE Trigger: CTCAGCCTGTGGGTTTCCTCACTGTTGATTTACATG...ATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCAGATCATCAAGGTCCTaGGACAGCGTCAATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRARSSRS*DSVNPV Trigger: CACTGGATTGACGCTGTCTCAGGACCTTGATGATCT...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | TATGTTCAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCCTCCTGCACAGAAGTaGAGTCCCCTGAGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVQLPFMIAEYSFWCSTIPPAQK*SPLRHR Trigger: CCTGTGCCTCAGGGGACTTCACTTCTGTGCAGGAGG...AATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTATCCTCGGATTCGATGTaGATCAATCCCTTGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVSSDSM*INPLNN Trigger: GTTGTTCAAGGGATTGATGCACATCGAATCCGAGGA...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | AGTTCACTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAACCCAGCTCTCTGGCTaGTTCTGGTGTGAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLARESGENEPSKALNQTQLSG*FWCEPN Trigger: ATTGGGCTCACACCAGAAGCAGCCAGAGAGCTGGGT...TTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAGTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCGCTCATCCTTGCCATTaGCTCCTGCACAGAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRAAHPCH*LLHRSE Trigger: TTCACTTCTGTGCAGGAGGCAATGGCAAGGATGAGC...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | GCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTGTGATTTGCATTAAAAGGAGCCCTCTCTaGTCCACTAGAGCCGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AHRRLAARILLPIFVICIKRSPL*STRAAR Trigger: CCGTGCGGCTCTAGTGGACCAGAGAGGGCTCCTTTT...AATGCAAATCACAAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | TTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGAGGAGTCCCCTTCATaGTTTACTGGTAAAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LYPRGTEHKMNTQRAPVNEESPS*FTGKGW Trigger: CCATCCTTTACCAGTAAACCATGAAGGGGACTCCTC...ATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGAACCAAAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCCCTAGTCCTCCTGCATaGGCATCAATGAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKIPKMDQKTSERQSPSPPA*ASMSEA Trigger: AGCCTCACTCATTGATGCCCATGCAGGAGGACTAGG...GCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTTTGGTTCAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGAACCAAAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCTCAGGAAAGGCAGGATaGCCCTGCACCATATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEPKIPKMDQKTSERQSSGKAG*PCTIWS Trigger: AGACCATATGGTGCAGGGCCATCCTGCCTTTCCTGA...GCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTTTGGTTCAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTATATGCATATATACTCTaGCATCTGGCTGTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVYAYIL*HLAVAL Trigger: CAAGGCCACAGCCAGATGCCAGAGTATATATGCATA...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAGCTGAATACTCCTTCTaGTGCTCAACCATTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEHKMNTQRAPVNGTASVAEYSF*CSTILR Trigger: TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGC...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACTGCATGGGCATCAATaGGTGAGGCTGCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTLHGHQ*VRLPLQ Trigger: TTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAG...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCCAAAGATGGACCCCCCATGTGACAAGATaGTGTTCCACAGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGENEPSKALNQRSQRWTPHVTR*CSTDDS Trigger: GCTGTCATCTGTGGAACATCATCTTGTCACATGGGG...GGTCCATCTTTGGGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACAAGAAGTGAAGTCCCCTaGGGCACAGGCACCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTRSEVP*GTGTQN Trigger: ATTCTGGGTGCCTGTGCCTCAGGGGACTTCACTTCT...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 ENSMUST00000142384.2 |
||
| CDS-3UTR GCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACAACCCAGCTCTCTGGCTaGTTCTGGTGTGAGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTTQLSG*FWCEPN Trigger: ATTGGGCTCACACCAGAAGCAGCCAGAGAGCTGGGT...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | ATAATAAGGTCCCCAGACACCTGGTACAAACACTGGATCTTTGCTGATCCCCATCACATAGTAGCGACTTaGTTCCTGGTCTCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIRSPDTWYKHWIFADPHHIVAT*FLVSAR Trigger: TCTGGCAGAGACCAGGAACCAAGTCGCTACTATGTG...ATGGGGATCAGCAAAGATCCAGTGTTTGTACCAGGTGTCTGGGGACCTTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCAATGCCGAGGAGTCCCCTTCATaGTTTACTGGTAAAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKMDQKTSERQSMGNAEESPS*FTGKGW Trigger: CCATCCTTTACCAGTAAACCATGAAGGGGACTCCTC...GGCATTGCCCATGCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | TCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCCAAAGATGGACCTTCTGGCTGTGGCCTTaGCTTGTAGTTCAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGENEPSKALNQRSQRWTFWLWP*LVVQER Trigger: CCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAA...GGTCCATCTTTGGGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCTGGTGTGAGCCCAATTCCAAGAGCAGCTCCAGGAAGCAACACGAGGGTTGGTAACTGTTCTTaGAACATTTCTGTTCGTATA | + |
|
Preference number: 4 (lower is better) Translates to: AASGVSPIPRAAPGSNTRVGNCS*NISVRI Trigger: TATACGAACAGAAATGTTCCAAGAACAGTTACCAAC...CCTCGTGTTGCTTCCTGGAGCTGCTCTTGGAATTGGGCTCACACCAGAAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
||
| CDS-3UTR TCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCTCGTGGTGGTTGAATTaGGGCTCCCACTTCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRASWWLN*GSHFLI Trigger: AATTAAGAAGTGGGAGCCTCAATTCAACCACCACGA...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | CTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCTTTCCAGTCACACTCTaGCCACCTTCATTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LARESGENEPSKALNQRSFPVTL*PPSFNQ Trigger: CTGGTTGAATGAAGGTGGTCAGAGTGTGACTGGAAA...GGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCAATGCCTCCCCATGGATACCATaGTGTTTCTGTAGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKMDQKTSERQSMGNASPWIP*CFCRFL Trigger: CAGAAACCTACAGAAACATCATGGTATCCATGGGGA...GGCATTGCCCATGCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACAATAAGAAGAGGGTACTaGGAGAGTGCCCTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTIRRGY*ESALLP Trigger: AGGCAGCAGGGCACTCTCTCAGTACCCTCTTCTTAT...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACATAAGAAGAGGGTACTaGGAGAGTGCCCTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNIRRGY*ESALLP Trigger: AGGCAGCAGGGCACTCTCTCAGTACCCTCTTCTTAT...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR GCA 90 bp | AAGATCCCAAAGATGGACCAGAAAACCTCAGAGAGACAAAGCATGGGCAATGCCCACTTCTTAATTGGCTaGTCTGCGAAAGCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPKMDQKTSERQSMGNAHFLIG*SAKAKR Trigger: CCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTG...GGCATTGCCCATGCTTTGTCTCTCTGAGGTTTTCTGGTCCATCTTTGGGATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR GCA 90 bp | TCTTCCAGTCCAATCATCTTCCAGAAGCTGTCATCCCAACCTTTCTCTGCTGAGCACTTCTTAATTGGCTaGTCTGCGAAAGCCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPIIFQKLSSQPFSAEHFLIG*SAKAKR Trigger: CCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTG...CTCAGCAGAGAAAGGTTGGGATGACAGCTTCTGGAAGATGATTGGACTGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
||
| CDS-3UTR GCA 90 bp | AGCATGGGCAATGCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTAAGGCAGGATGGCCCTaGACCATATGGTCTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SMGNAHRRLAARILLPIFKAGWP*TIWSIN Trigger: ATTGATAGACCATATGGTGCAGGGCCATCCTGCCTT...AAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGCATTGCCCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGACTAAGGGAGACCGGTTaGCATGGAAATCTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRLRETG*HGNLAK Trigger: TTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAG...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
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| CDS-3UTR GCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACAGGGTACTGAGAGAGTaGCCTGCTGCCTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNRVLRE*PAASIV Trigger: AACAATGGAGGCAGCAGGGCACTCTCTCAGTACCCT...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
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| CDS-3UTR GCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACTTGCCATTGCCTCCTaGACAGAAGTGAAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTLAIAS*TEVKSP Trigger: AGGGGACTTCACTTCTGTGCAGGAGGCAATGGCAAG...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACCTAGTCCTCCTGCATaGGCATCAATGAGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTPSPPA*ASMSEA Trigger: AGCCTCACTCATTGATGCCCATGCAGGAGGACTAGG...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CCA 90 bp | AGTTCACTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAGTAGGTTTCTGGCTGTaGCCTTGGCTTGTAGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLARESGENEPSKALNQVGFWL*PWLVVQ Trigger: CTGAACTACAAGCCAAGGCCACAGCCAGAAACCTAC...TTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAGTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CCA 90 bp | TGTACGGACAGGTATGTTCAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGGGAGACCGGTTGCCATaGAAATCTGGCCAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: CTDRYVQLPFMIAEYSFWGDRLP*KSGQTC Trigger: ACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCC...CCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTCCGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAGGAGACCGGTTGCCATaGAAATCTGGCCAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRGDRLP*KSGQTC Trigger: ACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCC...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGATGGCCAGGTAGAGGATaGCAAGATCATCAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRWPGRG*QDHQGP Trigger: AGGACCTTGATGATCTTGCCATCCTCTACCTGGCCA...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
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| CDS-3UTR CCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGACAATGGCTTGAACAGTaGCCAGGTAGAGGATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRQWLEQ*PGRGWQ Trigger: TTGCCATCCTCTACCTGGCCACTGTTCAAGCCATTG...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| 3UTR CAA 72 bp | TTCCTATGGCAGCAAGAGACTACATATACCAGATTCTaGCAGAATACAGCTCTCAAGTCCTCCCAGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLWQQETTYTRF*QNTALKSSQLD Trigger: GTCCAGCTGGGAGGACTTGAGAGCTGTATTCTGCAAGAATCTGGTATATGTAGTCTCTTGCTGCCATAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCCAAAGATGGACCTCGTGGTGGTTGAATTaGGGCTCCCACTTCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGENEPSKALNQRSQRWTSWWLN*GSHFLI Trigger: AATTAAGAAGTGGGAGCCTCAATTCAACCACCACGA...GGTCCATCTTTGGGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAATACACCACCCACATACTaGAGGACTCTGTGCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SASFRYCFLSWLQLASLNTPPTY*RTLCLV Trigger: GACCAAGCACAGAGTCCTTCAGTATGTGGGTGGTGT...ATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACATGGGCATCAATGAGTaGGGCTGCCACTGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNMGINE*GCHCNS Trigger: GGAATTGCAGTGGCAGCCTCACTCATTGATGCCCAT...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR TCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTAGGAAACCCACAGGCTaGGCCTTCTTAATCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTRKPTG*AFLIRS Trigger: GGATCTGATTAAGAAGGCTCAGCCTGTGGGTTTCCT...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGACATGTAAATCAACAGTaGGGAAACCCACAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRHVNQQ*GNPQAE Trigger: CTCAGCCTGTGGGTTTCCTCACTGTTGATTTACATG...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTAGATCATCAAGGTCCTaGGACAGCGTCAATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTRSSRS*DSVNPV Trigger: CACTGGATTGACGCTGTCTCAGGACCTTGATGATCT...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTCTAAGGGAGACCGGTTaGCATGGAAATCTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTLRETG*HGNLAK Trigger: TTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAG...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCAAAAAGCGGATTCTTaGTTAGGCCTCCACATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRAQKADS*LGLHIR Trigger: TCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTG...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTAATGTCAGCATaGATTTGCACAAAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MPKLYPRGTEHKMNTQRAPVMSA*ICTKSG Trigger: TCCGCTTTTTGTGCAAATGCATGCTGACATTACTGG...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACGACTTTCCCCACTTTaGTCATCCTTGCCATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTRLSPL*SSLPLP Trigger: AGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCG...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR GCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACCGACTTTCCCCACTTTaGTCATCCTTGCCATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNRLSPL*SSLPLP Trigger: AGGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCG...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR CCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATTGGCTGACAGCCCGGTaGTCCAGCCACATGATAACG | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHWLTAR*SSHMIT Trigger: CGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCA...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR CCA 90 bp | GACAGGTATGTTCAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAAGGTCCCCAGACACCTaGTACAAACACTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRYVQLPFMIAEYSFWCSRSPDT*YKHWIF Trigger: AAAGATCCAGTGTTTGTACCAGGTGTCTGGGGACCT...TGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATACCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTGAGTCCCAAAAGCAATaGCTTGAACAGTGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTESQKQ*LEQWPG Trigger: ACCTGGCCACTGTTCAAGCCATTGCTTTTGGGACTC...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR TCA 90 bp | AAACTTGGGAGTGAAAACAGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTATGCCACTGCAATTCCTaGAGGAAGACCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGSENSASFRYCFLSWLCHCNS*RKTQLS Trigger: AGAGAGCTGGGTCTTCCTTCAGGAATTGCAGTGGCA...TAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTGTTTTCACTCCCAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR TCA 90 bp | TTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAATGTCTATTTCTGCATGGGCATCAATaGGTGAGGCTGCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQILFSILATVSLSECLFLHGHQ*VRLPLQ Trigger: TTGCAGTGGCAGCCTCACTCATTGATGCCCATGCAG...AAATAGACATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR TCA 90 bp | CAGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAATTGCTGATCCCCATGTaGCAAGATGATGTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QCKFQILFSILATVSLSELLIPM*QDDVPQ Trigger: CTGTGGAACATCATCTTGTCACATGGGGATCAGCAA...TTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR TCA 90 bp | GCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTGTGATTTGCATTACACTGGATCTTTGCTaGTCCCCATGTGACAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AHRRLAARILLPIFVICITLDLC*SPCDKM Trigger: CATCTTGTCACATGGGGATCAGCAAAGATCCAGTGT...AATGCAAATCACAAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACATTTCCAGTCACACTCTaGCCACCTTCATTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTFPVTL*PPSFNQ Trigger: CTGGTTGAATGAAGGTGGTCAGAGTGTGACTGGAAA...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR TCA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACATGTAAATCAACAGTaGGGAAACCCACAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTHVNQQ*GNPQAE Trigger: CTCAGCCTGTGGGTTTCCTCACTGTTGATTTACATG...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTAAGGCAGGATGGCCCTaGACCATATGGTCTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTKAGWP*TIWSIN Trigger: ATTGATAGACCATATGGTGCAGGGCCATCCTGCCTT...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCTAGGGAATCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCTTCAAGTTCATATTTTaGAATGCCAGGAGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LARESGENEPSKALNQRSFKFIF*NARSVP Trigger: GGGGACACTCCTGGCATTGCAAAATATGAACTTGAA...GGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGATTCCCTAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR GCA 90 bp | GATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGCTAAGGGAGACCGGTTaGCATGGAAATCTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DNKTGMPKLYPRGTEHKMLRETG*HGNLAK Trigger: TTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAG...CATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTGAGAGAGTGCCCTGCTaGCTCCATTGTTTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PFMIAEYSFWCSTILRNTERVPC*LHCFND Trigger: ATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTC...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR GCA 90 bp | GATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGACAGGACCACAGGCATaGAGCAATGGCTTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: DNKTGMPKLYPRGTEHKMTGPQA*SNGLNS Trigger: ACTGTTCAAGCCATTGCTGCATGCCTGTGGTCCTGT...CATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS-3UTR CCA 90 bp | TATGTTCAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTAGAACCCAGGGACCATaGCTGAATAATAAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YVQLPFMIAEYSFWCSTIRTQGP*LNNKVP Trigger: GGGGACCTTATTATTCAGCCATGGTCCCTGGGTTCT...AATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTGAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | GCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTGTGATTTGCATTGTTTCTGTAGGTTTCTaGCTGTGGCCTTGGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AHRRLAARILLPIFVICIVSVGF*LWPWLV Trigger: TACAAGCCAAGGCCACAGCCAGAAACCTACAGAAAC...AATGCAAATCACAAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR CCA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACATCTGGCTGTGGCCTTaGCTTGTAGTTCAGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNIWLWP*LVVQER Trigger: CCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAT...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACGGAGACCGGTTGCCATaGAAATCTGGCCAAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNGDRLP*KSGQTC Trigger: ACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCC...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR TCA 90 bp | AGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAATCCAACCTTTCTCTGCTaGGTATGTCCATTTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SASFRYCFLSWLQLASLNPTFLC*VCPFAH Trigger: GTGTGCAAATGGACATACTCAGCAGAGAAAGGTTGG...ATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAACTTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR GCA 90 bp | CAGCTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGACAAAAAGCGGATTCTTaGTTAGGCCTCCACATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLPFMIAEYSFWCSTILRQKADS*LGLHIR Trigger: TCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTG...TCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR CCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATCTCTCTGGCTGCTTCTaGTGTGAGCCCAATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHLSGCF*CEPNSK Trigger: CTTGGAATTGGGCTCACACCAGAAGCAGCCAGAGAG...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR CCA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACAGGTCCCCAGACACCTaGTACAAACACTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNRSPDT*YKHWIF Trigger: AAAGATCCAGTGTTTGTACCAGGTGTCTGGGGACCT...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | GAATTAGACATGGGATTCAGAACCATGACTTTGAAAGGCTATCGTGTAGGTTTTAGAACCCAGGGACCATaGCTGAATAATAAGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELDMGFRTMTLKGYRVGFRTQGP*LNNKVP Trigger: GGGGACCTTATTATTCAGCCATGGTCCCTGGGTTCT...AAAACCTACACGATAGCCTTTCAAAGTCATGGTTCTGAATCCCATGTCTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR CCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACTATGCATATATACTCTaGCATCTGGCTGTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNYAYIL*HLAVAL Trigger: CAAGGCCACAGCCAGATGCCAGAGTATATATGCATA...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
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| CDS-3UTR CCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATACAGGCATGCAGCAATaGCTTGAACAGTGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHTGMQQ*LEQWPG Trigger: ACCTGGCCACTGTTCAAGCCATTGCTGCATGCCTGT...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
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| CDS-3UTR TCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATATGATGTTCCACAGATaGCAGCCAGCCTTGACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHMMFHR*QPALTS Trigger: TGACGTCAAGGCTGGCTGTCATCTGTGGAACATCAT...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR TCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATCCCCATGTGACAAGATaGTGTTCCACAGATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHPHVTR*CSTDDS Trigger: GCTGTCATCTGTGGAACATCATCTTGTCACATGGGG...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR GCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACCCAGTAATGTCAGCATaGATTTGCACAAAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNPVMSA*ICTKSG Trigger: TCCGCTTTTTGTGCAAATGCATGCTGACATTACTGG...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
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| CDS-3UTR CCA 90 bp | AAACTTGGGAGTGAAAACAGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTAAGGTCCCCAGACACCTaGTACAAACACTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLGSENSASFRYCFLSWLRSPDT*YKHWIF Trigger: AAAGATCCAGTGTTTGTACCAGGTGTCTGGGGACCT...TAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTGTTTTCACTCCCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR TCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATTTTCCAGTCACACTCTaGCCACCTTCATTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHFPVTL*PPSFNQ Trigger: CTGGTTGAATGAAGGTGGTCAGAGTGTGACTGGAAA...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
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| CDS-3UTR TCA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATCAATGTGTAAACTCCTaGACACTGAGAAGCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHQCVNS*TLRSQD Trigger: GTCCTGGCTTCTCAGTGTTCAGGAGTTTACACATTG...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142384.2 |
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| CDS-3UTR GCA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACATGTCAGCATGCATTTaGACAAAAAGCGGATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFMIAEYSFWCSTILRNMSACI*TKSGFL Trigger: CAAGAATCCGCTTTTTGTGCAAATGCATGCTGACAT...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
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| CDS-3UTR CCA 90 bp | AATGATGAAATGACAAATAGAGATAAATATACGCTCCTGGATCCAATGAGTGAGCACATAGTAGCGACTTaGTTCCTGGTCTCTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NDEMTNRDKYTLLDPMSEHIVAT*FLVSAR Trigger: TCTGGCAGAGACCAGGAACCAAGTCGCTACTATGTG...CTCACTCATTGGATCCAGGAGCGTATATTTATCTCTATTTGTCATTTCATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR GCA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACATGTCAGCATGCATTTaGACAAAAAGCGGATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNMSACI*TKSGFL Trigger: CAAGAATCCGCTTTTTGTGCAAATGCATGCTGACAT...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
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| CDS-3UTR GCA 90 bp | AATGATGAAATGACAAATAGAGATAAATATACGCTCCTGGATCCAATGAGTGAGTCCTCGGATTCGATGTaGATCAATCCCTTGAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NDEMTNRDKYTLLDPMSESSDSM*INPLNN Trigger: GTTGTTCAAGGGATTGATGCACATCGAATCCGAGGA...CTCACTCATTGGATCCAGGAGCGTATATTTATCTCTATTTGTCATTTCATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| 3UTR CAA 72 bp | GATCAAGAATTAGACATGGGATTCAGAACCATGACTTaGAAAGGCTATCGTGTAGGTTTTCCCATTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DQELDMGFRTMT*KGYRVGFPILS Trigger: ACTTAAAATGGGAAAACCTACACGATAGCCTTTCAAAGTCATGGTTCTGAATCCCATGTCTAATTCTTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS-3UTR CAA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGTCAGCCACAGGAGCTTaGGAGCCTGCATCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MNTQRAPVNGTASVRTGMSATGA*EPASPQ Trigger: CTGTGGAGATGCAGGCTCCAAAGCTCCTGTGGCTGA...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS GCA 90 bp | TCTGGTCCACTAGAGCCGCACGGACACTACCTGTTCCCACATCGATaGCCACATAGTAGCGACTTGGTTCCTGGTCTCTGCCAGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGPLEPHGHYLFPHR*PHSSDLVPGLCQTS Trigger: TGATGTCTGGCAGAGACCAGGAACCAAGTCGCTACTATGTGGGCATCGATGTGGGAACAGGTAGTGTCCGTGCGGCTCTAGTGGACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
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| CDS CCA 90 bp | CTGTGCTTGGTCTCATTAATCCTGTGGACCTGGCTGACAGCCCGGTaGTCCAGCCACATGATAACGTTTCGAGAGGAGTCCCCTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LCLVSLILWTWLTAR*SSHMITFREESPSW Trigger: CCATGAAGGGGACTCCTCTCGAAACGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCAGGTCCACAGGATTAATGAGACCAAGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | GAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGCCACATAGTAGCGACTaGGTTCCTGGTCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHKMNTQRAPVNGTASVRPHSSD*VPGLCQ Trigger: CTGGCAGAGACCAGGAACCAAGTCGCTACTATGTGG...CCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS CCA 90 bp | CACTTCTTAATTGGCTGCTCTGCGAAAGCCAAAAGGAGCCCTCTCTaGTCCACTAGAGCCGCACGGACACTACCTGTTCCCACATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: HFLIGCSAKAKRSPL*STRAARTLPVPTSM Trigger: CATCGATGTGGGAACAGGTAGTGTCCGTGCGGCTCTAGTGGACCAGAGAGGGCTCCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTACGACTTTCCCCACTTaGCTCATCCTTGCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KMNTQRAPVNGTASVRTGTTFPT*LILAIA Trigger: GGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGT...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS TCA 90 bp | CATGCCGCCCAGATATCCTCTGAGGACTGCTCGTGGTGGTTGAATTaGGGCTCCCACTTCTTAATTGGCTGCTCTGCGAAAGCCAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HAAQISSEDCSWWLN*GSHFLIGCSAKAKR Trigger: CCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTGGGCGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS TCA 90 bp | AGGAGTCCCCTTTGTGACAAGGCAGCATGCCGCCCAGATATCCTCTaGGGACTGCTCGTGGTGGTTGAATTGAGGCTCCCACTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSPLCDKAACRPDIL*GLLVVVELRLPLLN Trigger: ATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTGGGCGGCATGCTGCCTTGTCACAAAGGGGACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
||
| CDS CCA 90 bp | GAGTGTCCCCATGGATACCATGATGTTTCTGTAGGTTTCTGGCTGTaGCCTTGGCTTGTAGTTCAGGAAAGGCAGGATGGCCCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ECPHGYHDVSVGFWL*PWLVVQERQDGPAP Trigger: TGGTGCAGGGCCATCCTGCCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGGACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS CCA 90 bp | TGCCAGGAGTGTCCCCATGGATACCATGATGTTTCTGTAGGTTTCTaGCTGTGGCCTTGGCTTGTAGTTCAGGAAAGGCAGGATGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CQECPHGYHDVSVGF*LWPWLVVQERQDGP Trigger: AGGGCCATCCTGCCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGGACACTCCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTAGCTAAGGGAGACCGGTaGCCATGGAAATCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TEHKMNTQRAPVNGTASVAKGDR*PWKSGQ Trigger: TTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGC...TACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS TCA 90 bp | AGCTTTGGAGCCTGCATCTCCACAGACATCACACCACCCACATACTaGAGGACTCTGTGCTTGGTCTCATTAATCCTGTGGACCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFGACISTDITPPTY*RTLCLVSLILWTWL Trigger: CAGCCAGGTCCACAGGATTAATGAGACCAAGCACAGAGTCCTTCAGTATGTGGGTGGTGTGATGTCTGTGGAGATGCAGGCTCCAAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS TCA 90 bp | CTGAGTATGTCCATTTGCACACCAAGGAGCAGAGAGACCGTGCTGTaGCACCTGTTCCCACATCGATGCCCACATAGTAGCGACTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSMSICTPRSRETVL*HLFPHRCPHSSDLV Trigger: AACCAAGTCGCTACTATGTGGGCATCGATGTGGGAACAGGTGTCACAGCACGGTCTCTCTGCTCCTTGGTGTGCAAATGGACATACTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134012.9 |
||
| CDS CCA 90 bp | CCCCATGGATACCATGATGTTTCTGTAGGTTTCTGGCTGTGGCCTTaGCTTGTAGTTCAGGAAAGGCAGGATGGCCCTGCACCATATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PHGYHDVSVGFWLWP*LVVQERQDGPAPYG Trigger: ACCATATGGTGCAGGGCCATCCTGCCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | AAGATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTCTCGTGGTGGTTGAATaGAGGCTCCCACTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KMNTQRAPVNGTASVRTGLVVVE*RLPLLN Trigger: ATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAG...ACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | TTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCCCAGTGAATGCATGCAGCAATGGCTaGAACAGTGGCCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYPRGTEHKMNTQRAPVNACSNG*NSGQVE Trigger: CTCTACCTGGCCACTGTTCAAGCCATTGCTGCATGC...ATTCACTGGGGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS TCA 90 bp | AACAACTTCCTTTGTGACAAGGCAGCATGCCGCCCAGATATCCTCTaGGGACTGCTCGTGGTGGTTGAATTGAGGCTCCCACTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: NNFLCDKAACRPDIL*GLLVVVELRLPLLN Trigger: ATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTGGGCGGCATGCTGCCTTGTCACAAAGGAAGTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS TCA 90 bp | TCTCAAGTTCTTTGTGACAAGGCAGCATGCCGCCCAGATATCCTCTaGGGACTGCTCGTGGTGGTTGAATTGAGGCTCCCACTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQVLCDKAACRPDIL*GLLVVVELRLPLLN Trigger: ATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTGGGCGGCATGCTGCCTTGTCACAAAGAACTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107091.11 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGAAAATGAACCTTCCAAAGCTCTGAACCAAAGATCCCAAAGATGGACCCCACATAGTAGCGACTaGGTTCCTGGTCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGENEPSKALNQRSQRWTPHSSD*VPGLCQ Trigger: CTGGCAGAGACCAGGAACCAAGTCGCTACTATGTGG...GGTCCATCTTTGGGATCTTTGGTTCAGAGCTTTGGAAGGTTCATTTTCCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | TCAAAGAAATGTCCCGCCTTATCCCAGCAAATCTCTCTCAAGTTCTCCTTCAGCCCACATAGTAGCGACTaGGTTCCTGGTCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKKCPALSQQISLKFSFSPHSSD*VPGLCQ Trigger: CTGGCAGAGACCAGGAACCAAGTCGCTACTATGTGG...GCTGAAGGAGAACTTGAGAGAGATTTGCTGGGATAAGGCGGGACATTTCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131654.9 |
||
| CDS GCA 90 bp | GGATTCTTGCTTAGGCCTCCACATAAGAAGAGGGTACTGAGAGAGTaGCCTGCTGCCTCCATTGTTTCAATGATGAAGCGAGTCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLLRPPHKKRVLRE*PAASIVSMMKRVPK Trigger: TTTTGGGACTCGCTTCATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTCAGTACCCTCTTCTTATGTGGAGGCCTAAGCAAGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000156223.2 |
||
| CDS CCA 90 bp | ACCATGCCCTTCAGAGTCAGATCTGCTAAGGGAGACCGGTTGCCATaGAAATCTGGCCAAACATGTAAATCAACAGTGAGGAAACCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TMPFRVRSAKGDRLP*KSGQTCKSTVRKPT Trigger: TGTGGGTTTCCTCACTGTTGATTTACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGCAGATCTGACTCTGAAGGGCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR CAA 90 bp | TATACCAGATTCTTGCAGAATACAGCTCTCAAGTCCTCCCAGCTGGACAAGCTGGCTGAGTATGTCCATTaGCACACCAAGGAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YTRFLQNTALKSSQLDKLAEYVH*HTKEQR Trigger: TCTCTGCTCCTTGGTGTGCAAATGGACATACTCAGC...CAGCTTGTCCAGCTGGGAGGACTTGAGAGCTGTATTCTGCAAGAATCTGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
||
| CDS-3UTR CAA 90 bp | ATGAACACACAGAGGGCCCCAGTGAATGGCACAGCGTCTGTACGGACAGGTATGAATGTCAGCATGCATTaGCACAAAAAGCGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MNTQRAPVNGTASVRTGMNVSMH*HKKRIL Trigger: AAGAATCCGCTTTTTGTGCAAATGCATGCTGACATT...CATACCTGTCCGTACAGACGCTGTGCCATTCACTGGGGCCCTCTGTGTGTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS GCA 90 bp | AACCAGAGAACACGTGGCATCAAAACCAAGTCCTCGGATTCGATGTaGATCAATCCCTTGAACAACTTCCTTTGTGACAAGGCAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: NQRTRGIKTKSSDSM*INPLNNFLCDKAAC Trigger: GCATGCTGCCTTGTCACAAAGGAAGTTGTTCAAGGGATTGATGCACATCGAATCCGAGGACTTGGTTTTGATGCCACGTGTTCTCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS CCA 90 bp | CGGTGGTCCAGCCACATGATAACGTTTCGAGAGGAGTCCCCTTCATaGTTTACTGGTAAAGGATGGAACTCTTTATCCAAGACAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RWSSHMITFREESPS*FTGKGWNSLSKTTR Trigger: TCTGGTTGTCTTGGATAAAGAGTTCCATCCTTTACCAGTAAACCATGAAGGGGACTCCTCTCGAAACGTTATCATGTGGCTGGACCACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTGCTAAGGGAGACCGGTaGCCATGGAAATCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PFMIAEYSFWCSTILRNTAKGDR*PWKSGQ Trigger: TTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGC...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130541.8 ENSMUST00000156223.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACCATCTGGCTGTGGCCTaGGCTTGTAGTTCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPFMIAEYSFWCSTILRNHLAVA*ACSSGK Trigger: CTTTCCTGAACTACAAGCCAAGGCCACAGCCAGATG...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
||
| CDS-3UTR CAA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACGCTAAGGGAGACCGGTaGCCATGGAAATCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNAKGDR*PWKSGQ Trigger: TTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGC...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTCCCAAAAGCAATGGCTaGAACAGTGGCCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFMIAEYSFWCSTILRNTPKSNG*NSGQVE Trigger: CTCTACCTGGCCACTGTTCAAGCCATTGCTTTTGGG...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR CAA 90 bp | ATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACACAGAGGGCCACAAAAAGCGGATTCTaGCTTAGGCCTCCACATAAG | + |
|
Preference number: 5 (lower is better) Translates to: MPKLYPRGTEHKMNTQRATKSGF*LRPPHK Trigger: CTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGT...GGCCCTCTGTGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACGACTTTCCCCACTTaGCTCATCCTTGCCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPFMIAEYSFWCSTILRNTTFPT*LILAIA Trigger: GGCAATGGCAAGGATGAGCAAAGTGGGGAAAGTCGT...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS TCA 90 bp | TCAAGTTCATATTTTGCAATGCCAGGAGTGTCCCCATGGATACCATaGTGTTTCTGTAGGTTTCTGGCTGTGGCCTTGGCTTGTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSYFAMPGVSPWIP*CFCRFLAVALACSS Trigger: TGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGGACACTCCTGGCATTGCAAAATATGAACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS CCA 90 bp | CTGGTAAAGGATGGAACTCTTTATCCAAGACAACCAGAGAACACGTaGCATCAAAACCAAGTCCTCGGATTCGATGTGCATCAATCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVKDGTLYPRQPENT*HQNQVLGFDVHQSL Trigger: AAGGGATTGATGCACATCGAATCCGAGGACTTGGTTTTGATGCCACGTGTTCTCTGGTTGTCTTGGATAAAGAGTTCCATCCTTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | TTTCAGATACTGTTTTCTATCCTGGCTACAGTTAGCCTCTCTGAATGTCTATTTTCAGCCACAGGAGCTTaGGAGCCTGCATCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FQILFSILATVSLSECLFSATGA*EPASPQ Trigger: CTGTGGAGATGCAGGCTCCAAAGCTCCTGTGGCTGA...AAATAGACATTCAGAGAGGCTAACTGTAGCCAGGATAGAAAACAGTATCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | AAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACACAGCTGAGTATGTCCATTaGCACACCAAGGAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTGMPKLYPRGTEHKMNTAEYVH*HTKEQR Trigger: TCTCTGCTCCTTGGTGTGCAAATGGACATACTCAGC...TGTGTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | AATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATAAGATGAACCATCTGGCTGTGGCCTaGGCTTGTAGTTCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKTGMPKLYPRGTEHKMNHLAVA*ACSSGK Trigger: CTTTCCTGAACTACAAGCCAAGGCCACAGCCAGATG...GTTCATCTTATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000130541.8 |
||
| CDS-3UTR CAA 90 bp | ACATATACCAGATTCTTGCAGAATACAGCTCTCAAGTCCTCCCAGCTGGACAAGCAAGTCCATGAGCTGTaGGTAACTGTTCTTGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: TYTRFLQNTALKSSQLDKQVHEL*VTVLGT Trigger: TGTTCCAAGAACAGTTACCAACAGCTCATGGACTTG...CTTGTCCAGCTGGGAGGACTTGAGAGCTGTATTCTGCAAGAATCTGGTATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143742.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACTGCTCATCCTTGCCATaGCCTCCAGTAATGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPFMIAEYSFWCSTILRNCSSLP*PPVMSA Trigger: TGCTGACATTACTGGAGGCAATGGCAAGGATGAGCA...GTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS CCA 90 bp | ATAACGTTTCGAGAGGAGTCCCCTTCATGGTTTACTGGTAAAGGATaGAACTCTTTATCCAAGACAACCAGAGAACACGTGGCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ITFREESPSWFTGKG*NSLSKTTREHVASK Trigger: TTTTGATGCCACGTGTTCTCTGGTTGTCTTGGATAAAGAGTTCCATCCTTTACCAGTAAACCATGAAGGGGACTCCTCTCGAAACGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | GCCCACAGGAGGTTAGCAGCTAGAATACTTCTGCCAATATTTGTGATTTGCATTCTTCAAGTTCATATTTaGCAATGCCAGGAGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHRRLAARILLPIFVICILQVHI*QCQECP Trigger: GGGACACTCCTGGCATTGCAAAATATGAACTTGAAG...AATGCAAATCACAAATATTGGCAGAAGTATTCTAGCTGCTAACCTCCTGTGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | TTATTAGATAATAAGACAGGAATGCCAAAATTATACCCAAGGGGCACTGAGCATCCCAAAAGCAATGGCTaGAACAGTGGCCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLDNKTGMPKLYPRGTEHPKSNG*NSGQVE Trigger: CTCTACCTGGCCACTGTTCAAGCCATTGCTTTTGGG...ATGCTCAGTGCCCCTTGGGTATAATTTTGGCATTCCTGTCTTATTATCTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000079223.11 |
||
| CDS-3UTR CAA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTACAAAAAGCGGATTCTaGCTTAGGCCTCCACATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PFMIAEYSFWCSTILRNTTKSGF*LRPPHK Trigger: CTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGT...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS-3UTR CAA 90 bp | AAACTTGGGAGTGAAAACAGTGCAAGTTTCAGATACTGTTTTCTATCCTGGCTACTCGTGGTGGTTGAATaGAGGCTCCCACTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLGSENSASFRYCFLSWLLVVVE*RLPLLN Trigger: ATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAG...TAGCCAGGATAGAAAACAGTATCTGAAACTTGCACTGTTTTCACTCCCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | AATGATGAAATGACAAATAGAGATAAATATACGCTCCTGGATCCAATGAGTGAGGCTGAGTATGTCCATTaGCACACCAAGGAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NDEMTNRDKYTLLDPMSEAEYVH*HTKEQR Trigger: TCTCTGCTCCTTGGTGTGCAAATGGACATACTCAGC...CTCACTCATTGGATCCAGGAGCGTATATTTATCTCTATTTGTCATTTCATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
||
| CDS-3UTR CAA 90 bp | CCATTCATGATTGCTGAATACTCCTTCTGGTGCTCAACCATTCTCAGAAACACTAATGTCAGCATGCATTaGCACAAAAAGCGGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFMIAEYSFWCSTILRNTNVSMH*HKKRIL Trigger: AAGAATCCGCTTTTTGTGCAAATGCATGCTGACATT...AGTGTTTCTGAGAATGGTTGAGCACCAGAAGGAGTATTCAGCAATCATGAATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
||
| CDS CCA 72 bp | ATTGGCTGCTCTGCGAAAGCCAAAAGGAGCCCTCTCTaGTCCACTAGAGCCGCACGGACACTACCTGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IGCSAKAKRSPL*STRAARTLPVP Trigger: GGGAACAGGTAGTGTCCGTGCGGCTCTAGTGGACCAGAGAGGGCTCCTTTTGGCTTTCGCAGAGCAGCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS GCA 72 bp | CTAGAGCCGCACGGACACTACCTGTTCCCACATCGATaGCCACATAGTAGCGACTTGGTTCCTGGTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEPHGHYLFPHR*PHSSDLVPGLC Trigger: GCAGAGACCAGGAACCAAGTCGCTACTATGTGGGCATCGATGTGGGAACAGGTAGTGTCCGTGCGGCTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS TCA 72 bp | CTTTGTGACAAGGCAGCATGCCGCCCAGATATCCTCTaGGGACTGCTCGTGGTGGTTGAATTGAGGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCDKAACRPDIL*GLLVVVELRLP Trigger: TGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTGGGCGGCATGCTGCCTTGTCACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
||
| CDS CCA 72 bp | GTCTCATTAATCCTGTGGACCTGGCTGACAGCCCGGTaGTCCAGCCACATGATAACGTTTCGAGAGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLILWTWLTAR*SSHMITFREES Trigger: GGACTCCTCTCGAAACGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCAGGTCCACAGGATTAATGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000131654.9 |
||
| CDS CCA 72 bp | AGGACTCTGTGCTTGGTCTCATTAATCCTGTGGACCTaGCTGACAGCCCGGTGGTCCAGCCACATGATAACG | + |
|
Preference number: 6 (lower is better) Translates to: RTLCLVSLILWT*LTARWSSHMIT Trigger: CGTTATCATGTGGCTGGACCACCGGGCTGTCAGCCAGGTCCACAGGATTAATGAGACCAAGCACAGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000131654.9 |
||
| CDS TCA 72 bp | AATAGCAGCTCCCACGAGGACAGACTCCACCTCTTGTaGCAGGACCACAGGCATGCCAGTAATGTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: NSSSHEDRLHLL*QDHRHASNVSM Trigger: CATGCTGACATTACTGGCATGCCTGTGGTCCTGTCACAAGAGGTGGAGTCTGTCCTCGTGGGAGCTGCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 |
||
| CDS TCA 72 bp | TCCATTTGCACACCAAGGAGCAGAGAGACCGTGCTGTaGCACCTGTTCCCACATCGATGCCCACATAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SICTPRSRETVL*HLFPHRCPHSS Trigger: GCTACTATGTGGGCATCGATGTGGGAACAGGTGTCACAGCACGGTCTCTCTGCTCCTTGGTGTGCAAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134012.9 |
||
| CDS GCA 72 bp | GTATGTCCATTTGCACACCAAGGAGCAGAGAGACCGTaGTGTGACACCTGTTCCCACATCGATGCCCACATA | + |
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Preference number: 6 (lower is better) Translates to: VCPFAHQGAERP*CDTCSHIDAHI Trigger: TATGTGGGCATCGATGTGGGAACAGGTGTCACAGCACGGTCTCTCTGCTCCTTGGTGTGCAAATGGACATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134012.9 |
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| CDS CCA 72 bp | CTCGTGGTGGTTGAATTGAGGCTCCCACTTCTTAATTaGCTGCTCTGCGAAAGCCAAAAGGAGCCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LVVVELRLPLLN*LLCESQKEPSL Trigger: CAGAGAGGGCTCCTTTTGGCTTTCGCAGAGCAGCCAATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
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| CDS CCA 72 bp | TACCATGATGTTTCTGTAGGTTTCTGGCTGTGGCCTTaGCTTGTAGTTCAGGAAAGGCAGGATGGCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: YHDVSVGFWLWP*LVVQERQDGPA Trigger: TGCAGGGCCATCCTGCCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS CCA 72 bp | ATGCAGCAATGGCTTGAACAGTGGCCAGGTAGAGGATaGCAAGATCATCAAGGTCCTGAGACAGCGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: MQQWLEQWPGRG*QDHQGPETASI Trigger: GATTGACGCTGTCTCAGGACCTTGATGATCTTGCCATCCTCTACCTGGCCACTGTTCAAGCCATTGCTGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130541.8 |
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| CDS TCA 72 bp | CAGATATCCTCTGAGGACTGCTCGTGGTGGTTGAATTaGGGCTCCCACTTCTTAATTGGCTGCTCTGCGAAA | + |
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Preference number: 6 (lower is better) Translates to: QISSEDCSWWLN*GSHFLIGCSAK Trigger: TTTCGCAGAGCAGCCAATTAAGAAGTGGGAGCCTCAATTCAACCACCACGAGCAGTCCTCAGAGGATATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000131654.9 ENSMUST00000150830.2 ENSMUST00000177394.8 |
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| CDS TCA 72 bp | AAACCAAGTCCTCGGATTCGATGTGCATCAATCCCTTaGACAACTTCCTTTGTGACAAGGCAGCATGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: KPSPRIRCASIP*TTSFVTRQHAA Trigger: GGCGGCATGCTGCCTTGTCACAAAGGAAGTTGTTCAAGGGATTGATGCACATCGAATCCGAGGACTTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
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| CDS GCA 72 bp | CTTAGGCCTCCACATAAGAAGAGGGTACTGAGAGAGTaGCCTGCTGCCTCCATTGTTTCAATGATGAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: LRPPHKKRVLRE*PAASIVSMMKR Trigger: TCGCTTCATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTCAGTACCCTCTTCTTATGTGGAGGCCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000156223.2 |
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| CDS CCA 72 bp | TGTCCCCATGGATACCATGATGTTTCTGTAGGTTTCTaGCTGTGGCCTTGGCTTGTAGTTCAGGAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CPHGYHDVSVGF*LWPWLVVQERQ Trigger: CTGCCTTTCCTGAACTACAAGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS CCA 72 bp | CAAAAGCAATGGCTTGAACAGTGGCCAGGTAGAGGATaGCAAGATCATCAAGGTCCTGAGACAGCGTCAATC | + |
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Preference number: 6 (lower is better) Translates to: QKQWLEQWPGRG*QDHQGPETASI Trigger: GATTGACGCTGTCTCAGGACCTTGATGATCTTGCCATCCTCTACCTGGCCACTGTTCAAGCCATTGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000156223.2 |
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| CDS TCA 72 bp | TATTTTGCAATGCCAGGAGTGTCCCCATGGATACCATaGTGTTTCTGTAGGTTTCTGGCTGTGGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: YFAMPGVSPWIP*CFCRFLAVALA Trigger: AGCCAAGGCCACAGCCAGAAACCTACAGAAACATCATGGTATCCATGGGGACACTCCTGGCATTGCAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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| CDS GCA 72 bp | TGCCCTTCAGAGTCAGATCTGCTAAGGGAGACCGGTTaGCATGGAAATCTGGCCAAACATGTAAATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: CPSESDLLRETG*HGNLAKHVNQQ Trigger: CTGTTGATTTACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGCAGATCTGACTCTGAAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000130541.8 ENSMUST00000156223.2 |
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| CDS GCA 72 bp | TGTGACAGGACCACAGGCATGCCAGTAATGTCAGCATaGATTTGCACAAAAAGCGGATTCTTGCTTAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CDRTTGMPVMSA*ICTKSGFLLRP Trigger: AGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCATGCTGACATTACTGGCATGCCTGTGGTCCTGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 |
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| CDS CAA 72 bp | AAAACCAAGTCCTCGGATTCGATGTGCATCAATCCCTaGAACAACTTCCTTTGTGACAAGGCAGCATGCCGC | + |
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Preference number: 6 (lower is better) Translates to: KTKSSDSMCINP*NNFLCDKAACR Trigger: GCGGCATGCTGCCTTGTCACAAAGGAAGTTGTTCAAGGGATTGATGCACATCGAATCCGAGGACTTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
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| CDS CAA 90 bp | TTGCCTCCAGTAATGTCAGCATGCATTTGCACAAAAAGCGGATTCTaGCTTAGGCCTCCACATAAGAAGAGGGTACTGAGAGAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LPPVMSACICTKSGF*LRPPHKKRVLRECP Trigger: AGGGCACTCTCTCAGTACCCTCTTCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCATGCTGACATTACTGGAGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
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| CDS GCA 72 bp | TGCTCATCCTTGCCATTGCCTCCAGTAATGTCAGCATaGATTTGCACAAAAAGCGGATTCTTGCTTAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSSLPLPPVMSA*ICTKSGFLLRP Trigger: AGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCATGCTGACATTACTGGAGGCAATGGCAAGGATGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156223.2 |
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| CDS CCA 72 bp | CGAGAGGAGTCCCCTTCATGGTTTACTGGTAAAGGATaGAACTCTTTATCCAAGACAACCAGAGAACACGTG | + |
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Preference number: 6 (lower is better) Translates to: REESPSWFTGKG*NSLSKTTREHV Trigger: CACGTGTTCTCTGGTTGTCTTGGATAAAGAGTTCCATCCTTTACCAGTAAACCATGAAGGGGACTCCTCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
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| CDS CCA 72 bp | TTCAGAGTCAGATCTGCTAAGGGAGACCGGTTGCCATaGAAATCTGGCCAAACATGTAAATCAACAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FRVRSAKGDRLP*KSGQTCKSTVR Trigger: CCTCACTGTTGATTTACATGTTTGGCCAGATTTCCATGGCAACCGGTCTCCCTTAGCAGATCTGACTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000130541.8 ENSMUST00000156223.2 |
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| CDS GCA 72 bp | ACACGTGGCATCAAAACCAAGTCCTCGGATTCGATGTaGATCAATCCCTTGAACAACTTCCTTTGTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: TRGIKTKSSDSM*INPLNNFLCDK Trigger: CTTGTCACAAAGGAAGTTGTTCAAGGGATTGATGCACATCGAATCCGAGGACTTGGTTTTGATGCCACGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
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| CDS CCA 72 bp | AGCCACATGATAACGTTTCGAGAGGAGTCCCCTTCATaGTTTACTGGTAAAGGATGGAACTCTTTATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SHMITFREESPS*FTGKGWNSLSK Trigger: CTTGGATAAAGAGTTCCATCCTTTACCAGTAAACCATGAAGGGGACTCCTCTCGAAACGTTATCATGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043335.11 ENSMUST00000079223.11 |
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| CDS CAA 72 bp | GTAATGTCAGCATGCATTTGCACAAAAAGCGGATTCTaGCTTAGGCCTCCACATAAGAAGAGGGTACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VMSACICTKSGF*LRPPHKKRVLR Trigger: TCTCAGTACCCTCTTCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCATGCTGACATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079223.11 ENSMUST00000107091.11 ENSMUST00000156223.2 |
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| CDS GCA 72 bp | AAATGCTTTAGAAGAAGTGACTTCAAGTTCATATTTTaGAATGCCAGGAGTGTCCCCATGGATACCATGATG | + |
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Preference number: 6 (lower is better) Translates to: KCFRRSDFKFIF*NARSVPMDTMM Trigger: CATCATGGTATCCATGGGGACACTCCTGGCATTGCAAAATATGAACTTGAAGTCACTTCTTCTAAAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043335.11 |
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