Pregenerated sensors for FGFR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005320Ensembl transcript IDs: ENSMUST00000005452.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGGTCGATGCATCAGGTTaGAGCTCAGCGAGGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: LPKTGPERGSATAVVSSQVDASG*SSARRP Trigger: GGGTCTCCTCGCTGAGCTGCAACCTGATGCATCGAC...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| 3UTR GCA 72 bp | CTGACACTGCCAACATTAAATGTCGATGCATCAGGTTaGAGCTCAGCGAGGAGACCCACGGCCATGGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: LTLPTLNVDASG*SSARRPTAMGR Trigger: GCGGCCCATGGCCGTGGGTCTCCTCGCTGAGCTGCAACCTGATGCATCGACATTTAATGTTGGCAGTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| 3UTR TCA 72 bp | TCCCACAGGCTTCTCGTCTCTCAGGGACACCAGAGCTaGTGCCCCTTTCACCAAGATGCTGGAACAAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: SHRLLVSQGHQS*CPFHQDAGTSN Trigger: ATTGCTTGTTCCAGCATCTTGGTGAAAGGGGCATCAGCTCTGGTGTCCCTGAGAGACGAGAAGCCTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| 3UTR TCA 72 bp | GGGCAAGGCCATGATCTTGAGATGAGAGTTGAACTCTaGGATGGGAGCATAAGGCTGGAACAGAAGGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: GQGHDLEMRVEL*DGSIRLEQKAS Trigger: TGAGGCCTTCTGTTCCAGCCTTATGCTCCCATCTCAGAGTTCAACTCTCATCTCAAGATCATGGCCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGGGAGCCCCCGAGGGTaGAGATTTCCCACAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATAGSPRG*RFPTAG Trigger: TCCTGCTGTGGGAAATCTTCACCCTCGGGGGCTCCC...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAAGCTGTGGTGTTGGCTaGGAGCCCCGCCTGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATASCGVG*EPRLQD Trigger: ATCCTGCAGGCGGGGCTCCCAGCCAACACCACAGCT...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGGCAAGGGCGGGCCGCTaGAGGAGAGACGGACACCTC | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQARAGR*RRDGHL Trigger: GAGGTGTCCGTCTCTCCTCCAGCGGCCCGCCCTTGC...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCACACTGGAGGAGCAGGTaGTGCTGGCATCCCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATAHWRSR*CWHPHW Trigger: CCAATGGGGATGCCAGCAGCACCTGCTCCTCCAGTG...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCTCACAGCCACGGTGCTaGTTTGGTCGGGCCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICSQPRC*FGRAGR Trigger: CCTCCCGGCCCGACCAAACCAGCACCGTGGCTGTGA...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGGGCCGGGAAGGAGAGTaGTCCTTCGCTGCTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQGREGE*SFAAPR Trigger: CCTCGGAGCAGCGAAGGACCACTCTCCTTCCCGGCC...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCTACAGGGGCCCTTCCTaGGTGCAGACACCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICYRGPS*VQTPSR Trigger: CCTGCTGGGTGTCTGCACTCAGGAAGGGCCCCTGTA...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCATTCAGCCACTGTATGTaGGGCTGGGCGTCGCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATAFSHCM*GWASLY Trigger: GTACAGCGACGCCCAGCCCCACATACAGTGGCTGAA...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGCTGAGATCAGGGCCTaGGGGGCGCCGGGCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGAEIRA*GAPGTE Trigger: CTCCGTGCCCGGCGCCCCCCAGGCCCTGATCTCAGC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCCGGAATGCCAGGGTATaGGGAGCCCCCGAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICRNARV*GAPEGE Trigger: TTCACCCTCGGGGGCTCCCCATACCCTGGCATTCCG...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCACCGTGAGCCACGCTaGCTGGTAGGAAAGGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQHREPR*LVGKAD Trigger: ATCGGCCTTTCCTACCAGTCAGCGTGGCTCACGGTG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGCTAGGCAGGGCTCCTaGTCCATTTCCTCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICARQGS*SISSEA Trigger: GGCCTCTGAGGAAATGGAGCAGGAGCCCTGCCTAGC...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAAGGCATGGGGTTCCCTaGAGCTGGACAGCGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATARHGVP*SWTAEF Trigger: AAATTCCGCTGTCCAGCTGCAGGGAACCCCATGCCT...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCCCTCTGAGATGGGGCTaGGTGCCAGCACTCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICPLRWG*VPALPH Trigger: ATGAGGGAGTGCTGGCACGCAGCCCCATCTCAGAGG...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGTGTGTACGACGGTCATaGAGCCACGGGCCAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQCVRRS*SHGPGR Trigger: TCTGCCTGGCCCGTGGCTCCATGACCGTCGTACACA...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCAGTAGGCCTCTGAGATaGGGCTGCGTGCCAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICSRPLR*GCVPAL Trigger: GAGTGCTGGCACGCAGCCCCATCTCAGAGGCCTACT...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| 3UTR CAA 72 bp | CCTGACACTGCCAACATTAAATGTCGATGCATCAGGTaGCAGCTCAGCGAGGAGACCCACGGCCATGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PDTANIKCRCIR*QLSEETHGHGP Trigger: CGGCCCATGGCCGTGGGTCTCCTCGCTGAGCTGCAACCTGATGCATCGACATTTAATGTTGGCAGTGTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGTCTGGCCTCAGGGGTTaGTGTTGTCCACGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQSGLRG*CCPREV Trigger: GACCTCACGTGGACAACAGCAACCCCTGAGGCCAGA...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGGGACAAACTTGACTTaGCAGAGGACCTCGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATAGTNLT*QRTSTP Trigger: TGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCC...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGTGGTGGACACCACGTaGCAGCCCAAAGTCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICVVDTT*QPKVSD Trigger: ATCGCTGACTTTGGGCTGGCACGTGGTGTCCACCAC...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCTGGACAGCGGAATTTaGCAGTATTCCCGGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQLDSGI*QYSRQA Trigger: TGCCTGCCGGGAATACTGTCAAATTCCGCTGTCCAG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCCTCTGGCAGCACCGTaGGCCACGCTGACTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGPLAAP*ATLTGR Trigger: CCTACCAGTCAGCGTGGCTCACGGTGCTGCCAGAGG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCACCAGGGACAAACTTaGCTTGCCAGAGGACCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQHQGQT*LARGPR Trigger: TCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCCCCTCTCGCAGCAGTaGGAAGAGCTCCTCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGPLSQQ*EELLHR Trigger: CCGGTGGAGGAGCTCTTCTCACTGCTGCGAGAGGGG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCACAGCCTCACAGGCTaGCCCAGGGCCACCGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGHSLTG*PRATVN Trigger: GTTGACGGTGGCCCTGGGGCAGCCTGTGAGGCTGTG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCAGATGCTAGGCGGCTaGCCTCTTTGTACCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQQMLGG*PLCTSD Trigger: GTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCCGGCAGGCACTGCATaGAGTTTCTTCTCCATGCGT | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQPAGTA*SFFSMR Trigger: ACGCATGGAGAAGAAACTGCATGCAGTGCCTGCCGG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCCGTCGCTGTACACCTTaGAGAGTAGCTCCACATCGC | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICRRCTP*RVAPHR Trigger: GCGATGTGGAGCTACTCTGCAAGGTGTACAGCGACG...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCACTCAAGGGACAAAGCTaGTGTCCCCTGAAAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATALKGQS*CPLKDA Trigger: AGCATCTTTCAGGGGACACCAGCTTTGTCCCTTGAG...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCCACAGCTGTGGTGTTaGCTGGGAGCCCCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGPQLWC*LGAPPA Trigger: TGCAGGCGGGGCTCCCAGCCAACACCACAGCTGTGG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCACTACCTCCGAGCTATTaGTGTCTGTTGTCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPRMALPKTGPERGSATALPPSY*CLLSSG Trigger: TCCTGAAGACAACAGACATCAATAGCTCGGAGGTAG...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCATACGATTCTCCCCGTaGAAGGCCTGTCCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICIRFSP*KACPSL Trigger: CAAGGATGGACAGGCCTTCCACGGGGAGAATCGTAT...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCCCGAAGGTTTCCCTTaGCGGCACATTCCACAATCA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQPEGFP*RHIPQS Trigger: TGATTGTGGAATGTGCCGCCAAGGGAAACCTTCGGG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGTGCTGGCATCCCCATTaGAGGGAGAAAAGGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQCWHPH*REKRVQ Trigger: TTGGACCCTTTTCTCCCTCCAATGGGGATGCCAGCA...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCCTGGCAGGCGGCCGTTaGTGGTTTTCTTATAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICLAGGR*WFSYSS Trigger: ACTACTATAAGAAAACCAGCAACGGCCGCCTGCCAG...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGTCGAACAATGCCTCTaGAGCCATCCATTTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICVEQCL*SHPFDW Trigger: CCAGTCAAATGGATGGCTCCAGAGGCATTGTTCGAC...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCAGGAGCAGGTGCTGCTaGCATCCCCATTGGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGRSRCC*HPHWRE Trigger: CTCCCTCCAATGGGGATGCCAGCAGCACCTGCTCCT...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGAAAGGGAAGGGGCTTaGCTCGAGGGGCAAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGEREGA*LEGQRV Trigger: GACCCTTTGCCCCTCGAGCCAAGCCCCTTCCCTTTC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGATAGCTGTAGCGAATaGTACCCAGAGAGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NLRTKNGPPQNRARERICDSCSE*YPESSP Trigger: TGGAGAACTCTCTGGGTAGCATTCGCTACAGCTATC...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCTCGGAGACCAGGTCTaGCAAATCCTTGTCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGLGDQV*QILVGG Trigger: GCCTCCGACAAGGATTTGGCAGACCTGGTCTCCGAG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCCAGGTCCCGGTGGATaGACTTCCGAGACTCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGPGPGG*TSETPD Trigger: ATCTGGAGTCTCGGAAGTGCATCCACCGGGACCTGG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGGCAGGCGGCCGTTGCTaGTTTTCTTATAGTAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LPKTGPERGSATAVVSSQAGGRC*FSYSSQ Trigger: TTGACTACTATAAGAAAACCAGCAACGGCCGCCTGC...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR TCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCTTAAAAGTAGGCCTCTaGGATGGGGCTGCGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGLKVGL*DGAACQ Trigger: CTGGCACGCAGCCCCATCTCAGAGGCCTACTTTTAA...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCCCATCCTTGAGCCAGTaGATGGTAGGCATGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGPSLSQ*MVGMGF Trigger: GAACCCCATGCCTACCATCCACTGGCTCAAGGATGG...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGTGTCCCCTGAAAGATaGTCAACAGGGCCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGVSPER*STGPRA Trigger: TGCTCTTGGCCCTGTTGAGCATCTTTCAGGGGACAC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGCAGTTTCTTCTCCATaGGTTGGGGGTGTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGAVSSP*VGGVSS Trigger: ACTGGACACACCCCCAACGCATGGAGAAGAAACTGC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR GCA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCATTCCCGGCAGGCACTaGATGCAGTTTCTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIRLEQKASTMNLRTKNGIPGRH*MQFLLH Trigger: ATGGAGAAGAAACTGCATGCAGTGCCTGCCGGGAAT...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | GGCGGCCTCTCCAACCCCGTACTCGCCCAGCAGATGCTAGGCGGCTaGCCTCTTTGTACCAGTGACGACCACGCTCGGTGCGCCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLSNPVLAQQMLGG*PLCTSDDHARCAHS Trigger: GCTGTGGGCGCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTGCTGGGCGAGTACGGGGTTGGAGAGGCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | CCACAGCACAGCCTCACAGGCTGCCCCAGGGCCACCGTCAACACCTaGTCTTGCTGCTCCAGGATTGGGGCTAGGCAGGGCTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQHSLTGCPRATVNT*SCCSRIGARQGSCS Trigger: GGAGCAGGAGCCCTGCCTAGCCCCAATCCTGGAGCAGCAAGAGCAGGTGTTGACGGTGGCCCTGGGGCAGCCTGTGAGGCTGTGCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | ATGCTAGGCGGCTGCCCTCTTTGTACCAGTGACGACCACGCTCGGTaGGCCCACAGCACAGCCTCACAGGCTGCCCCAGGGCCACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLGGCPLCTSDDHAR*AHSTASQAAPGPPS Trigger: TGACGGTGGCCCTGGGGCAGCCTGTGAGGCTGTGCTGTGGGCGCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 90 bp | CACGGGCCAGGCAGAGGTATCGGCCAGCATCCTCAGGAAGGAAGCTaGCGATCTCCAGGCGGCCTCTCCAACCCCGTACTCGCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGPGRGIGQHPQEGS*RSPGGLSNPVLAQQ Trigger: CTGCTGGGCGAGTACGGGGTTGGAGAGGCCGCCTGGAGATCGCCAGCTTCCTTCCTGAGGATGCTGGCCGATACCTCTGCCTGGCCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 90 bp | TGGTCCTTCGCTGCTCCGAGGTCCATCAGGGCTGAGATCAGGGCCTaGGGGGCGCCGGGCACGGAGGAATTCCCGAAGGTTTCCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSFAAPRSIRAEIRA*GAPGTEEFPKVSLG Trigger: GCCAAGGGAAACCTTCGGGAATTCCTCCGTGCCCGGCGCCCCCCAGGCCCTGATCTCAGCCCTGATGGACCTCGGAGCAGCGAAGGACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 90 bp | CGTACTCGCCCAGCAGATGCTAGGCGGCTGCCCTCTTTGTACCAGTaGCGACCACGCTCGGTGCGCCCACAGCACAGCCTCACAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRPADARRLPSLYQ*RPRSVRPQHSLTGC Trigger: GCAGCCTGTGAGGCTGTGCTGTGGGCGCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTGCTGGGCGAGTACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | CACAGCCTCACAGGCTGCCCCAGGGCCACCGTCAACACCTGCTCTTaGTGCTCCAGGATTGGGGCTAGGCAGGGCTCCTGCTCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLTGCPRATVNTCS*CSRIGARQGSCSIS Trigger: GGAAATGGAGCAGGAGCCCTGCCTAGCCCCAATCCTGGAGCAGCAAGAGCAGGTGTTGACGGTGGCCCTGGGGCAGCCTGTGAGGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | AGCCTCACAGGCTGCCCCAGGGCCACCGTCAACACCTGCTCTTGCTaGTCCAGGATTGGGGCTAGGCAGGGCTCCTGCTCCATTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLTGCPRATVNTCSC*SRIGARQGSCSISS Trigger: TGAGGAAATGGAGCAGGAGCCCTGCCTAGCCCCAATCCTGGAGCAGCAAGAGCAGGTGTTGACGGTGGCCCTGGGGCAGCCTGTGAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 90 bp | ATTCCCAAAGCGGATCGAGAGGCAGGTCTAGATTCACAAGGCCCGTaGGCAAGGGCGGGCCGCTGGAGGAGAGACGGACACCTCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IPKADREAGLDSQGP*ARAGRWRRDGHLAP Trigger: TGGTGCGAGGTGTCCGTCTCTCCTCCAGCGGCCCGCCCTTGCTCACGGGCCTTGTGAATCTAGACCTGCCTCTCGATCCGCTTTGGGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGACCACAGCTGTGGTGTaGGCTGGGAGCCCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPKTGPERGSATAVVSSQTTAVV*AGSPAC Trigger: GCAGGCGGGGCTCCCAGCCAACACCACAGCTGTGGT...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGCACCAGGCTCCAGTGTaGGTGGCGCAGCCGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPKTGPERGSATAVVSSQHQAPV*VAQPNA Trigger: GGCATTCGGCTGCGCCACCAACACTGGAGCCTGGTG...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 90 bp | TGTTGTCCACGTGAGGTCTTCCTCTGGCAGCACCGTGAGCCACGCTaGCTGGTAGGAAAGGCCGATGGAGTTGCCCGCCAGACAGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: CCPREVFLWQHREPR*LVGKADGVARQTGI Trigger: TATACCTGTCTGGCGGGCAACTCCATCGGCCTTTCCTACCAGTCAGCGTGGCTCACGGTGCTGCCAGAGGAAGACCTCACGTGGACAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | CGCTGGAGGAGAGACGGACACCTCGCACCAGGGACAAACTTGACTTaGCAGAGGACCTCGACTCCAAAGAGAACTGTCGGGCCAAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWRRDGHLAPGTNLT*QRTSTPKRTVGPKG Trigger: TCCCTTTGGCCCGACAGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCTCCTCCAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCCTTGCTGCTCCAGGATaGGGGCTAGGCAGGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NLRTKNGPPQNRARERICLAAPG*GLGRAP Trigger: AGGAGCCCTGCCTAGCCCCAATCCTGGAGCAGCAAG...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGCGTCGCTGTACACCTaGCAGAGTAGCTCCACATCG | + |
|
Preference number: 5 (lower is better) Translates to: GPRMALPKTGPERGSATAASLYT*QSSSTS Trigger: CGATGTGGAGCTACTCTGCAAGGTGTACAGCGACGC...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCACCGAAGCTGCTGCCGTaGATGACGACGTGTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPRMALPKTGPERGSATAPKLLP*MTTCFS Trigger: GCTGAAACACGTCGTCATCAACGGCAGCAGCTTCGG...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCACTGCTGGCATCCCCATaGGAGGGAGAAAAGGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRMALPKTGPERGSATALLASP*EGEKGP Trigger: TGGACCCTTTTCTCCCTCCAATGGGGATGCCAGCAG...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | CCCTGCAGCTGGACAGCGGAATTTGACAGTATTCCCGGCAGGCACTaGATGCAGTTTCTTCTCCATGCGTTGGGGGTGTGTCCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PCSWTAEFDSIPGRH*MQFLLHALGVCPVG Trigger: CCCTACTGGACACACCCCCAACGCATGGAGAAGAAACTGCATGCAGTGCCTGCCGGGAATACTGTCAAATTCCGCTGTCCAGCTGCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | GGTGCGGGGACCGCTCCAGCACATCCAGGAGATAGCTGTAGCGAATaGTACCCAGAGAGTTCTCCACAAGGCATGTGTATGTGCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAGTAPAHPGDSCSE*YPESSPQGMCMCHG Trigger: ACCGTGGCACATACACATGCCTTGTGGAGAACTCTCTGGGTAGCATTCGCTACAGCTATCTCCTGGATGTGCTGGAGCGGTCCCCGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 90 bp | CCAATACGATTCTCCCCGTGGAAGGCCTGTCCATCCTTGAGCCAGTaGATGGTAGGCATGGGGTTCCCTGCAGCTGGACAGCGGAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PIRFSPWKACPSLSQ*MVGMGFPAAGQRNL Trigger: CAAATTCCGCTGTCCAGCTGCAGGGAACCCCATGCCTACCATCCACTGGCTCAAGGATGGACAGGCCTTCCACGGGGAGAATCGTATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGTCTGGAGCCATCCATTaGACTGGCAGGCGGCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPKTGPERGSATAVVSSQSGAIH*TGRRPL Trigger: CAACGGCCGCCTGCCAGTCAAATGGATGGCTCCAGA...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCACAGCCAGCAGGACCTaGTCCAGAGCTTCCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLRTKNGPPQNRARERICTASRT*SRASTS Trigger: GCTGGTGGAAGCTCTGGACAAGGTCCTGCTGGCTGT...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AACCTTAGGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCAGAAAGGGAAGGGGCTaGGCTCGAGGGGCAAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NLRTKNGPPQNRARERICRKGRG*ARGAKG Trigger: ACCCTTTGCCCCTCGAGCCAAGCCCCTTCCCTTTCT...GCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCCTAAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 90 bp | TTTCTTCTCCATGCGTTGGGGGTGTGTCCAGTAGGGTGCTTGCTGTaGGTAGACATGACCACTCGAGGAGCTGCTGAGTGTCTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLHALGVCPVGCLL*VDMTTRGAAECLGV Trigger: GACCCCAAGACACTCAGCAGCTCCTCGAGTGGTCATGTCTACCCACAGCAAGCACCCTACTGGACACACCCCCAACGCATGGAGAAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 90 bp | TGCATGCAGTTTCTTCTCCATGCGTTGGGGGTGTGTCCAGTAGGGTaGTTGCTGTGGGTAGACATGACCACTCGAGGAGCTGCTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CMQFLLHALGVCPVG*LLWVDMTTRGAAEC Trigger: ACACTCAGCAGCTCCTCGAGTGGTCATGTCTACCCACAGCAAGCACCCTACTGGACACACCCCCAACGCATGGAGAAGAAACTGCATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCATGTTGTCTTCAGGACTaGTACGTAGGGGAAACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GPRMALPKTGPERGSATACCLQD*YVGETV Trigger: GACGGTTTCCCCTACGTACAAGTCCTGAAGACAACA...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | GGACCAAGAATGGCCCTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCATCCTTGTCGGAGGCATaGTCTTTCAGCATCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GPRMALPKTGPERGSATASLSEA*SFSIFT Trigger: TGTGAAGATGCTGAAAGACAATGCCTCCGACAAGGA...TGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAGGGCCATTCTTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | CTCCCCAAAACAGGGCCAGAGAGAGGATCTGCGACAGCAGTAGTCTCAAGTCAGGAGCTGCTGAGTGTCTaGGGGTCTTCATCATTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LPKTGPERGSATAVVSSQELLSV*GSSSLL Trigger: CAGTAATGATGAAGACCCCAAGACACTCAGCAGCTC...CTGACTTGAGACTACTGCTGTCGCAGATCCTCTCTCTGGCCCTGTTTTGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 90 bp | CAGCGGACACGTTCCTCAGATACAAGACCTCTACCTCCGAGCTATTaGTGTCTGTTGTCTTCAGGACTTGTACGTAGGGGAAACCGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QRTRSSDTRPLPPSY*CLLSSGLVRRGNRR Trigger: CCGACGGTTTCCCCTACGTACAAGTCCTGAAGACAACAGACATCAATAGCTCGGAGGTAGAGGTCTTGTATCTGAGGAACGTGTCCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGCTGGACAGCGGAATTaGACAGTATTCCCGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIRLEQKASTMNLRTKNGAGQRN*TVFPAG Trigger: GCCTGCCGGGAATACTGTCAAATTCCGCTGTCCAGC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCGCACCAGGGACAAACTaGACTTGCCAGAGGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SIRLEQKASTMNLRTKNGAPGTN*TCQRTS Trigger: CGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGC...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCTGTCCAGTAGGGTGCTaGCTGTGGGTAGACATGACC | + |
|
Preference number: 5 (lower is better) Translates to: SIRLEQKASTMNLRTKNGCPVGC*LWVDMT Trigger: GGTCATGTCTACCCACAGCAAGCACCCTACTGGACA...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS-3UTR CAA 90 bp | AGCATAAGGCTGGAACAGAAGGCCTCAACTATGAACCTTAGGACCAAGAATGGCTTTCTTCTCCATGCGTaGGGGGTGTGTCCAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRLEQKASTMNLRTKNGFLLHA*GVCPVG Trigger: CCCTACTGGACACACCCCCAACGCATGGAGAAGAAA...GCCATTCTTGGTCCTAAGGTTCATAGTTGAGGCCTTCTGTTCCAGCCTTATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | GGCTGCCCTCTTTGTACCAGTGACGACCACGCTCGGTaGGCCCACAGCACAGCCTCACAGGCTGCCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GCPLCTSDDHAR*AHSTASQAAPG Trigger: CCCTGGGGCAGCCTGTGAGGCTGTGCTGTGGGCGCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 72 bp | GCTGCTCCGAGGTCCATCAGGGCTGAGATCAGGGCCTaGGGGGCGCCGGGCACGGAGGAATTCCCGAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAPRSIRAEIRA*GAPGTEEFPKV Trigger: AACCTTCGGGAATTCCTCCGTGCCCGGCGCCCCCCAGGCCCTGATCTCAGCCCTGATGGACCTCGGAGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 72 bp | CCAGCAGATGCTAGGCGGCTGCCCTCTTTGTACCAGTaGCGACCACGCTCGGTGCGCCCACAGCACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PADARRLPSLYQ*RPRSVRPQHSL Trigger: GAGGCTGTGCTGTGGGCGCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 72 bp | GCGGATCGAGAGGCAGGTCTAGATTCACAAGGCCCGTaGGCAAGGGCGGGCCGCTGGAGGAGAGACGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: ADREAGLDSQGP*ARAGRWRRDGH Trigger: GTGTCCGTCTCTCCTCCAGCGGCCCGCCCTTGCTCACGGGCCTTGTGAATCTAGACCTGCCTCTCGATCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 72 bp | CGTGAGGTCTTCCTCTGGCAGCACCGTGAGCCACGCTaGCTGGTAGGAAAGGCCGATGGAGTTGCCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: REVFLWQHREPR*LVGKADGVARQ Trigger: CTGGCGGGCAACTCCATCGGCCTTTCCTACCAGTCAGCGTGGCTCACGGTGCTGCCAGAGGAAGACCTCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | TCCAACCCCGTACTCGCCCAGCAGATGCTAGGCGGCTaGCCTCTTTGTACCAGTGACGACCACGCTCGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNPVLAQQMLGG*PLCTSDDHARC Trigger: GCACCGAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTGCTGGGCGAGTACGGGGTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 72 bp | GGCAGAGGTATCGGCCAGCATCCTCAGGAAGGAAGCTaGCGATCTCCAGGCGGCCTCTCCAACCCCGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: GRGIGQHPQEGS*RSPGGLSNPVL Trigger: GAGTACGGGGTTGGAGAGGCCGCCTGGAGATCGCCAGCTTCCTTCCTGAGGATGCTGGCCGATACCTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | GCGGGCCGCTGGAGGAGAGACGGACACCTCGCACCAGGGACAAACTaGACTTGCCAGAGGACCTCGACTCCAAAGAGAACTGTCGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRWRRDGHLAPGTN*TCQRTSTPKRTVGP Trigger: TGGCCCGACAGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCTCCTCCAGCGGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | AGTGACAGGCTGGCGAGAGTAGTGGCCACGGATGACTaGCCGATGATACACCCCGGCCAGCAGCAGGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDRLARVVATDD*PMIHPGQQQEH Trigger: GTGCTCCTGCTGCTGGCCGGGGTGTATCATCGGCAAGTCATCCGTGGCCACTACTCTCGCCAGCCTGTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | CCATCACCAGGCTCCAGTGTTGGTGGCGCAGCCGAATaGCTCCAATACGATTCTCCCCGTGGAAGGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSPGSSVGGAAE*LQYDSPRGRPV Trigger: GACAGGCCTTCCACGGGGAGAATCGTATTGGAGGCATTCGGCTGCGCCACCAACACTGGAGCCTGGTGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | CCGCTGGAGGAGAGACGGACACCTCGCACCAGGGACAAACTTGACTaGCCAGAGGACCTCGACTCCAAAGAGAACTGTCGGGCCAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: PLEERRTPRTRDKLD*PEDLDSKENCRAKG Trigger: CCCTTTGGCCCGACAGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCTCCTCCAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 72 bp | GAGCCAGTGGATGGTAGGCATGGGGTTCCCTGCAGCTaGACAGCGGAATTTGACAGTATTCCCGGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: EPVDGRHGVPCS*TAEFDSIPGRH Trigger: GTGCCTGCCGGGAATACTGTCAAATTCCGCTGTCCAGCTGCAGGGAACCCCATGCCTACCATCCACTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 72 bp | CATGCGTTGGGGGTGTGTCCAGTAGGGTGCTTGCTGTaGGTAGACATGACCACTCGAGGAGCTGCTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: HALGVCPVGCLL*VDMTTRGAAEC Trigger: ACACTCAGCAGCTCCTCGAGTGGTCATGTCTACCCACAGCAAGCACCCTACTGGACACACCCCCAACGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | CTTCTCCATGCGTTGGGGGTGTGTCCAGTAGGGTGCTaGCTGTGGGTAGACATGACCACTCGAGGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLHALGVCPVGC*LWVDMTTRGAA Trigger: AGCAGCTCCTCGAGTGGTCATGTCTACCCACAGCAAGCACCCTACTGGACACACCCCCAACGCATGGAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | CCAATACGATTCTCCCCGTGGAAGGCCTGTCCATCCTaGAGCCAGTGGATGGTAGGCATGGGGTTCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PIRFSPWKACPS*SQWMVGMGFPA Trigger: TGCAGGGAACCCCATGCCTACCATCCACTGGCTCAAGGATGGACAGGCCTTCCACGGGGAGAATCGTATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | CTTTTGTATAGTGACAGGCTGGCGAGAGTAGTGGCCACGGATGACTaGCCGATGATACACCCCGGCCAGCAGCAGGAGCACAAGCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LLYSDRLARVVATDD*PMIHPGQQQEHKQN Trigger: GTTCTGCTTGTGCTCCTGCTGCTGGCCGGGGTGTATCATCGGCAAGTCATCCGTGGCCACTACTCTCGCCAGCCTGTCACTATACAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | GCCGATGGAGTTGCCCGCCAGACAGGTATACTCTCCTaGATCCTCAGCGGACACGTTCCTCAGATACAAGAC | + |
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Preference number: 6 (lower is better) Translates to: ADGVARQTGILS*ILSGHVPQIQD Trigger: GTCTTGTATCTGAGGAACGTGTCCGCTGAGGATGCAGGAGAGTATACCTGTCTGGCGGGCAACTCCATCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | AGAGACGGACACCTCGCACCAGGGACAAACTTGACTTaGCAGAGGACCTCGACTCCAAAGAGAACTGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RDGHLAPGTNLT*QRTSTPKRTVG Trigger: CCCGACAGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | GTAGGCATGGGGTTCCCTGCAGCTGGACAGCGGAATTaGACAGTATTCCCGGCAGGCACTGCATGCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VGMGFPAAGQRN*TVFPAGTACSF Trigger: GAAACTGCATGCAGTGCCTGCCGGGAATACTGTCAAATTCCGCTGTCCAGCTGCAGGGAACCCCATGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | GAGAGACGGACACCTCGCACCAGGGACAAACTTGACTaGCCAGAGGACCTCGACTCCAAAGAGAACTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: ERRTPRTRDKLD*PEDLDSKENCR Trigger: CCGACAGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | CAGCGGAATTTGACAGTATTCCCGGCAGGCACTGCATaGAGTTTCTTCTCCATGCGTTGGGGGTGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRNLTVFPAGTA*SFFSMRWGCVQ Trigger: CTGGACACACCCCCAACGCATGGAGAAGAAACTGCATGCAGTGCCTGCCGGGAATACTGTCAAATTCCGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CCA 72 bp | CTGCTCCATTTCCTCAGAGGCCTCAAGGGACAAAGCTaGTGTCCCCTGAAAGATGCTCAACAGGGCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLHFLRGLKGQS*CPLKDAQQGQE Trigger: CTCTTGGCCCTGTTGAGCATCTTTCAGGGGACACCAGCTTTGTCCCTTGAGGCCTCTGAGGAAATGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | AGAGAACTGTCGGGCCAAAGGGAAACGGGACAGCTTTaGTATAGTGACAGGCTGGCGAGAGTAGTGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: RELSGQRETGQL*YSDRLARVVAT Trigger: CGTGGCCACTACTCTCGCCAGCCTGTCACTATACAAAAGCTGTCCCGTTTCCCTTTGGCCCGACAGTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | TGGAGGAGAGACGGACACCTCGCACCAGGGACAAACTaGACTTGCCAGAGGACCTCGACTCCAAAGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: WRRDGHLAPGTN*TCQRTSTPKRT Trigger: AGTTCTCTTTGGAGTCGAGGTCCTCTGGCAAGTCAAGTTTGTCCCTGGTGCGAGGTGTCCGTCTCTCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | ATGCAGTTTCTTCTCCATGCGTTGGGGGTGTGTCCAGTAGGGTGCTaGCTGTGGGTAGACATGACCACTCGAGGAGCTGCTGAGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: MQFLLHALGVCPVGC*LWVDMTTRGAAECL Trigger: AAGACACTCAGCAGCTCCTCGAGTGGTCATGTCTACCCACAGCAAGCACCCTACTGGACACACCCCCAACGCATGGAGAAGAAACTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | CGACTCCAAAGAGAACTGTCGGGCCAAAGGGAAACGGGACAGCTTTaGTATAGTGACAGGCTGGCGAGAGTAGTGGCCACGGATGACTTG | + |
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Preference number: 6 (lower is better) Translates to: RLQRELSGQRETGQL*YSDRLARVVATDDL Trigger: CAAGTCATCCGTGGCCACTACTCTCGCCAGCCTGTCACTATACAAAAGCTGTCCCGTTTCCCTTTGGCCCGACAGTTCTCTTTGGAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS TCA 72 bp | ACACGCGGTCGAACAATGCCTCTGGAGCCATCCATTTaGCTGGCAGGCGGCCGTTGCTGGTTTTCTTATAGT | + |
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Preference number: 6 (lower is better) Translates to: TRGRTMPLEPSI*LAGGRCWFSYS Trigger: ACTATAAGAAAACCAGCAACGGCCGCCTGCCAGTCAAATGGATGGCTCCAGAGGCATTGTTCGACCGCGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | TGGACAGCGGAATTTGACAGTATTCCCGGCAGGCACTaGATGCAGTTTCTTCTCCATGCGTTGGGGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: WTAEFDSIPGRH*MQFLLHALGVC Trigger: ACACACCCCCAACGCATGGAGAAGAAACTGCATGCAGTGCCTGCCGGGAATACTGTCAAATTCCGCTGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS GCA 72 bp | ACCGCTCCAGCACATCCAGGAGATAGCTGTAGCGAATaGTACCCAGAGAGTTCTCCACAAGGCATGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: TAPAHPGDSCSE*YPESSPQGMCM Trigger: CATACACATGCCTTGTGGAGAACTCTCTGGGTAGCATTCGCTACAGCTATCTCCTGGATGTGCTGGAGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 72 bp | ATCACCTCCATCTCGGAGACCAGGTCTGCCAAATCCTaGTCGGAGGCATTGTCTTTCAGCATCTTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: ITSISETRSAKS*SEALSFSIFTA Trigger: GGCTGTGAAGATGCTGAAAGACAATGCCTCCGACAAGGATTTGGCAGACCTGGTCTCCGAGATGGAGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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| CDS CAA 90 bp | TCATTACTGATGGAGGTTAAGGAGTCATCCATAAGCAACGTAAGATaGTGTACGACGGTCATGGAGCCACGGGCCAGGCAGAGGTATCGG | + |
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Preference number: 6 (lower is better) Translates to: SLLMEVKESSISNVR*CTTVMEPRARQRYR Trigger: CCGATACCTCTGCCTGGCCCGTGGCTCCATGACCGTCGTACACAATCTTACGTTGCTTATGGATGACTCCTTAACCTCCATCAGTAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005452.6 |
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