RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGFR3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054252

Ensembl transcript IDs: ENSMUST00000067150.14, ENSMUST00000087820.8, ENSMUST00000114411.9, ENSMUST00000164207.10, ENSMUST00000169212.9, ENSMUST00000171509.9, ENSMUST00000181298.5, ENSMUST00000201295.2, ENSMUST00000201437.4, ENSMUST00000202138.4, ENSMUST00000202182.2, ENSMUST00000202791.3

Found 448 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTATGACACCCCCAGGCACAAGGTGCCATGTAGGAGAGAGGTTTaGCACACAGAGCAGAGCCTCCCTGTAGGCTCAGCTTGGGGCACC +
Preference number: 1 (lower is better)
Translates to: SYDTPRHKVPCRREV*HTEQSLPVGSAWGT
Trigger: GGTGCCCCAAGCTGAGCCTACAGGGAGGCTCTGCTCTGTGTGGCAAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGGTGTCATAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 90 bp CAGGCAGCCTGGAGATGTCGAGCTATGACACCCCCAGGCACAAGGTaGCATGTAGGAGAGAGGTTTGCCACACAGAGCAGAGCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: QAAWRCRAMTPPGTR*HVGERFATQSRASL
Trigger: CAGGGAGGCTCTGCTCTGTGTGGCAAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGGTGTCATAGCTCGACATCTCCAGGCTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR TCA 90 bp AAACCATGTGCTAGGCCCCAAGAAAGTCACCCTGAGCCACTGTCCTaGCCCTGCTGGTTGACAGGCAAGGGACAGCCACCCAAGCCTAGG +
Preference number: 1 (lower is better)
Translates to: KPCARPQESHPEPLS*PCWLTGKGQPPKPR
Trigger: CCTAGGCTTGGGTGGCTGTCCCTTGCCTGTCAACCAGCAGGGTCAGGACAGTGGCTCAGGGTGACTTTCTTGGGGCCTAGCACATGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 90 bp CCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTaGTGCTCCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGT +
Preference number: 1 (lower is better)
Translates to: PEPQGCTGWASYILV*CSWPWPVRRLLYSS
Trigger: ACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 90 bp TGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTaGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGG +
Preference number: 1 (lower is better)
Translates to: CTGWASYILVWCSWP*PVRRLLYSSACSQG
Trigger: CCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 90 bp TTGGAAAGTAAGTTGGTTGTGTTAACAAAACCACATCTGCCAGTGTaGGCTGACAAACCATGTGCTAGGCCCCAAGAAAGTCACCCTGAG +
Preference number: 1 (lower is better)
Translates to: LESKLVVLTKPHLPV*ADKPCARPQESHPE
Trigger: CTCAGGGTGACTTTCTTGGGGCCTAGCACATGGTTTGTCAGCCCACACTGGCAGATGTGGTTTTGTTAACACAACCAACTTACTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 90 bp CCTAGTGAGACCCATGGAGTATCTTGCTCCCTTGGGCCTCAACTTTaGCTTTTTCCATATAGATATTCTTATATATATGTATGTATATAT +
Preference number: 1 (lower is better)
Translates to: PSETHGVSCSLGPQL*LFPYRYSYIYVCIY
Trigger: ATATATACATACATATATATAAGAATATCTATATGGAAAAAGGCAAAGTTGAGGCCCAAGGGAGCAAGATACTCCATGGGTCTCACTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCCATTGCACTGGGCTaGCTAGGGTCCACTGCACAC +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARPIALG*LGSTAH
Trigger: GTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATTCCCAAGGGGCCTCTaGACCCAGGAGCCAAGGATA +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARFPRGL*TQEPRI
Trigger: TATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR TCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCCGTAATTTGTCTCTaGGGGGCAGGGTGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARPVICL*GAGWKA
Trigger: TGCTTTCCACCCTGCCCCTCAGAGACAAATTACGGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCCCCAGGCACAAGGTaGCATGTAGGAGAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARPPGTR*HVGERF
Trigger: AAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGCCAGAAAAGCCCCTTaGTTCTCAGCCTGCTCTTGC +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARARKAP*FSACSC
Trigger: GCAAGAGCAGGCTGAGAAGCAAGGGGCTTTTCTGGC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR TCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGGTAGCAGTGGGAAATaGGAGGGCCAGAACCCCAGG +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNGSSGK*EGQNPR
Trigger: CCTGGGGTTCTGGCCCTCTCATTTCCCACTGCTACC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATACATTCTTGTTTGGTaGTCCTGGCCCTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARYILVW*SWPWPV
Trigger: GACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCTGGCTAGGGTCCACTaGACACCAGCAGTAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGLARVH*TPAVAG
Trigger: CCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTGGCTAGGGTCCACTaGACACCAGCAGTAGCAGGG +
Preference number: 2 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLARVH*TPAVAG
Trigger: CCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCTGGCTAGGGTCCACTaGACACCAGCAGTAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPLARVH*TPAVAG
Trigger: CCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCCATTGCACTGGGCTaGCTAGGGTCCACTGCACAC +
Preference number: 2 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPIALG*LGSTAH
Trigger: GTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACCCATTGCACTGGGCTaGCTAGGGTCCACTGCACAC +
Preference number: 2 (lower is better)
Translates to: GCTGWASYILVWCSWPWPPIALG*LGSTAH
Trigger: GTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCCCATTGCACTGGGCTaGCTAGGGTCCACTGCACAC +
Preference number: 2 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGPIALG*LGSTAH
Trigger: GTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACCCATTGCACTGGGCTaGCTAGGGTCCACTGCACAC +
Preference number: 2 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLPIALG*LGSTAH
Trigger: GTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATTGGTGCTCCTGGCCCTaGCCAGTCAGGAGATTACTC +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNWCSWP*PVRRLL
Trigger: GAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCA...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCTTGTTTGGTGCTCCTaGCCCTGGCCAGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNLVWCS*PWPVRR
Trigger: TCTCCTGACTGGCCAGGGCCAGGAGCACCAAACAAG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATCTTACATTCTTGTTTaGTGCTCCTGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARSYILV*CSWPWP
Trigger: TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CAA 90 bp CCCTGGAAGGTAGCAGTGGGAAATGAGAGGGCCAGAACCCCAGGGTaGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PWKVAVGNERARTPG*HRVGLLHSCLVLLA
Trigger: GGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCCTCTCATTTCCCACTGCTACCTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CAA 90 bp GAGAGAGGTTTGCCACACAGAGCAGAGCCTCCCTGTAGGCTCAGCTaGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: ERGLPHRAEPPCRLS*GHQEGQGPLWTWSL
Trigger: TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCTACAGGGAGGCTCTGCTCTGTGTGGCAAACCTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTACTGTTGGCCCATTaGACTGGGCTGGCTAGGGTC +
Preference number: 2 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLLLAH*TGLARV
Trigger: GACCCTAGCCAGCCCAGTGCAATGGGCCAACAGTAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTTCCCAAGGGGCCTCTaGACCCAGGAGCCAAGGATA +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPFPRGL*TQEPRI
Trigger: TATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCATTCCCAAGGGGCCTCTaGACCCAGGAGCCAAGGATA +
Preference number: 2 (lower is better)
Translates to: GCTGWASYILVWCSWPWPFPRGL*TQEPRI
Trigger: TATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAA...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTATTCCCAAGGGGCCTCTaGACCCAGGAGCCAAGGATA +
Preference number: 2 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLFPRGL*TQEPRI
Trigger: TATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAA...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCCCCAGGCACAAGGTaGCATGTAGGAGAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPPGTR*HVGERF
Trigger: AAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCGCGTAAACATTGCCTaGGGCTTGGTCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRVNIA*GLVCGT
Trigger: AGTCCCACAGACCAAGCCCCAGGCAATGTTTACGCG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTGGTGCTCCTGGCCCTaGCCAGTCAGGAGATTACTC +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPWCSWP*PVRRLL
Trigger: GAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCGCGTAAACATTGCCTaGGGCTTGGTCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRVNIA*GLVCGT
Trigger: AGTCCCACAGACCAAGCCCCAGGCAATGTTTACGCG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCGCGTAAACATTGCCTaGGGCTTGGTCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRVNIA*GLVCGT
Trigger: AGTCCCACAGACCAAGCCCCAGGCAATGTTTACGCG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACGCGTAAACATTGCCTaGGGCTTGGTCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLRVNIA*GLVCGT
Trigger: AGTCCCACAGACCAAGCCCCAGGCAATGTTTACGCG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGGAAAGCAGGCAGCCTaGAGATGTCGAGCTATGACA +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNGKQAA*RCRAMT
Trigger: TGTCATAGCTCGACATCTCCAGGCTGCCTGCTTTCC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAGTATCTTGCTCCCTTaGGCCTCAACTTTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARSILLP*ASTLPF
Trigger: AAAAGGCAAAGTTGAGGCCCAAGGGAGCAAGATACT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTACATTCTTGTTTGGTaGTCCTGGCCCTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPYILVW*SWPWPV
Trigger: GACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCTTGCTTCTCAGCCTaGTCTTGCCAGTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPCFSA*SCQFPS
Trigger: ACTAGGAAACTGGCAAGAGCAGGCTGAGAAGCAAGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGTCTTGTCTACTGTTaGCCCATTGCACTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPSLVYC*PIALGW
Trigger: CCAGCCCAGTGCAATGGGCCAACAGTAGACAAGACT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGAGTCTTGTCTACTGTTaGCCCATTGCACTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGSLVYC*PIALGW
Trigger: CCAGCCCAGTGCAATGGGCCAACAGTAGACAAGACT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAGTCTTGTCTACTGTTaGCCCATTGCACTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GPEPQGCTGWASYILVWCSLVYC*PIALGW
Trigger: CCAGCCCAGTGCAATGGGCCAACAGTAGACAAGACT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAAGTCTTGTCTACTGTTaGCCCATTGCACTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLSLVYC*PIALGW
Trigger: CCAGCCCAGTGCAATGGGCCAACAGTAGACAAGACT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTCTTACATTCTTGTTTaGTGCTCCTGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPSYILV*CSWPWP
Trigger: TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACTTGGGCCTCAACTTTaGCTTTTTCCATATAGATAT +
Preference number: 2 (lower is better)
Translates to: LGEPFKRQGATASLVEARLGPQL*LFPYRY
Trigger: ATATCTATATGGAAAAAGGCAAAGTTGAGGCCCAAG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAGTATCTTGCTCCCTTaGGCCTCAACTTTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNSILLP*ASTLPF
Trigger: AAAAGGCAAAGTTGAGGCCCAAGGGAGCAAGATACT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCGCGTAAACATTGCCTaGGGCTTGGTCTGTGGGACT +
Preference number: 2 (lower is better)
Translates to: PRINTQEVLSTVGPLHWARVNIA*GLVCGT
Trigger: AGTCCCACAGACCAAGCCCCAGGCAATGTTTACGCG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR TCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGGTAGCAGTGGGAAATaGGAGGGCCAGAACCCCAGG +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPGSSGK*EGQNPR
Trigger: CCTGGGGTTCTGGCCCTCTCATTTCCCACTGCTACC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCTGGCTAGGGTCCACTaGACACCAGCAGTAGCAGGG +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPLARVH*TPAVAG
Trigger: CCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTGGTGCTCCTGGCCCTaGCCAGTCAGGAGATTACTC +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPWCSWP*PVRRLL
Trigger: GAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR TCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCCCGTAATTTGTCTCTaGGGGGCAGGGTGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPPVICL*GAGWKA
Trigger: TGCTTTCCACCCTGCCCCTCAGAGACAAATTACGGG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCCCCCAGGCACAAGGTaGCATGTAGGAGAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPPPGTR*HVGERF
Trigger: AAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACTTGTTTGGTGCTCCTaGCCCTGGCCAGTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: ESSYINLIPHKRGPKATELVWCS*PWPVRR
Trigger: TCTCCTGACTGGCCAGGGCCAGGAGCACCAAACAAG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTTCTCAGCCTGCTCTTaGCAGTTTCCTAGTGAGACC +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPFSACS*QFPSET
Trigger: GGTCTCACTAGGAAACTGGCAAGAGCAGGCTGAGAA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTCTTACATTCTTGTTTaGTGCTCCTGGCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPSYILV*CSWPWP
Trigger: TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAATACATTCTTGTTTGGTaGTCCTGGCCCTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: ESSYINLIPHKRGPKATEYILVW*SWPWPV
Trigger: GACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTA...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACCTTGCTTCTCAGCCTaGTCTTGCCAGTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: ESSYINLIPHKRGPKATEPCFSA*SCQFPS
Trigger: ACTAGGAAACTGGCAAGAGCAGGCTGAGAAGCAAGG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCTTGGGCCTCAACTTTaGCTTTTTCCATATAGATAT +
Preference number: 2 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPLGPQL*LFPYRY
Trigger: ATATCTATATGGAAAAAGGCAAAGTTGAGGCCCAAG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 72 bp CTGTTGGCCCATTGCACTGGGCTGGCTAGGGTCCACTaGACACCAGCAGTAGCAGGGCGGGCTAGGGTCCGC +
Preference number: 3 (lower is better)
Translates to: LLAHCTGLARVH*TPAVAGRARVR
Trigger: GCGGACCCTAGCCCGCCCTGCTACTGCTGGTGTGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGCCAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGCCAGAACCCCAGGGTaGCACAGGGTGGGCCTCTTA +
Preference number: 3 (lower is better)
Translates to: LGEPFKRQGATASLVEARARTPG*HRVGLL
Trigger: TAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAACATTGCCTGGGGCTaGGTCTGTGGGACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: LGEPFKRQGATASLVEARNIAWG*VCGTVG
Trigger: GCCAACAGTCCCACAGACCAAGCCCCAGGCAATGTT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATCAGGTACCCGTAATTaGTCTCTGAGGGGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: LGEPFKRQGATASLVEARSGTRN*SLRGRV
Trigger: CACCCTGCCCCTCAGAGACAAATTACGGGTACCTGA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATGCCAGAAAAGCCCCTaGCTTCTCAGCCTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: LGEPFKRQGATASLVEARCQKSP*LLSLLL
Trigger: CAAGAGCAGGCTGAGAAGCAAGGGGCTTTTCTGGCA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR TCA 72 bp GCTAGGCCCCAAGAAAGTCACCCTGAGCCACTGTCCTaGCCCTGCTGGTTGACAGGCAAGGGACAGCCACCC +
Preference number: 3 (lower is better)
Translates to: ARPQESHPEPLS*PCWLTGKGQPP
Trigger: GGGTGGCTGTCCCTTGCCTGTCAACCAGCAGGGTCAGGACAGTGGCTCAGGGTGACTTTCTTGGGGCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 72 bp ACCCCCAGGCACAAGGTGCCATGTAGGAGAGAGGTTTaGCACACAGAGCAGAGCCTCCCTGTAGGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: TPRHKVPCRREV*HTEQSLPVGSA
Trigger: AGCTGAGCCTACAGGGAGGCTCTGCTCTGTGTGGCAAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 72 bp CTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTaGACATGGAGTCTAGCCCTCTCCACAATGGTCCCT +
Preference number: 3 (lower is better)
Translates to: LSLGHQEGQGPL*TWSLALSTMVP
Trigger: AGGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGAACATTGCCTGGGGCTaGGTCTGTGGGACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTNIAWG*VCGTVG
Trigger: GCCAACAGTCCCACAGACCAAGCCCCAGGCAATGTT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAACATTGCCTGGGGCTaGGTCTGTGGGACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: GCTGWASYILVWCSWPWPNIAWG*VCGTVG
Trigger: GCCAACAGTCCCACAGACCAAGCCCCAGGCAATGTT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGGGCCTCTTACATTCTaGTTTGGTGCTCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNGPLTF*FGAPGP
Trigger: AGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGGGCCTCTTACATTCTaGTTTGGTGCTCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPGPLTF*FGAPGP
Trigger: AGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 72 bp TGGAGATGTCGAGCTATGACACCCCCAGGCACAAGGTaGCATGTAGGAGAGAGGTTTGCCACACAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: WRCRAMTPPGTR*HVGERFATQSR
Trigger: TCTGCTCTGTGTGGCAAACCTCTCTCCTACATGGCACCTTGTGCCTGGGGGTGTCATAGCTCGACATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 72 bp GCCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTaGCCCATTGCACTGGGCTGGCTAGGGTCCACTGCA +
Preference number: 3 (lower is better)
Translates to: AKDKHAGSLVYC*PIALGWLGSTA
Trigger: TGCAGTGGACCCTAGCCAGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 72 bp CGTGCCAGAAAAGCCCCTTGCTTCTCAGCCTGCTCTTaGCAGTTTCCTAGTGAGACCCATGGAGTATCTTGC +
Preference number: 3 (lower is better)
Translates to: RARKAPCFSACS*QFPSETHGVSC
Trigger: GCAAGATACTCCATGGGTCTCACTAGGAAACTGGCAAGAGCAGGCTGAGAAGCAAGGGGCTTTTCTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR CCA 72 bp TGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTaGCCAGTCAGGAGATTACTCTACAGCAGTGCATGT +
Preference number: 3 (lower is better)
Translates to: WASYILVWCSWP*PVRRLLYSSAC
Trigger: ACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAACATTGCCTGGGGCTaGGTCTGTGGGACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPNIAWG*VCGTVG
Trigger: GCCAACAGTCCCACAGACCAAGCCCCAGGCAATGTT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR TCA 72 bp ACAGGCAAGGGACAGCCACCCAAGCCTAGGGCCCAGTaGCAGTACAAAAGTAACAAAATTGCATTCACCACT +
Preference number: 3 (lower is better)
Translates to: TGKGQPPKPRAQ*QYKSNKIAFTT
Trigger: AGTGGTGAATGCAATTTTGTTACTTTTGTACTGTCACTGGGCCCTAGGCTTGGGTGGCTGTCCCTTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTCAGGTACCCGTAATTaGTCTCTGAGGGGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPSGTRN*SLRGRV
Trigger: CACCCTGCCCCTCAGAGACAAATTACGGGTACCTGA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAAACATTGCCTGGGGCTaGGTCTGTGGGACTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ESSYINLIPHKRGPKATENIAWG*VCGTVG
Trigger: GCCAACAGTCCCACAGACCAAGCCCCAGGCAATGTT...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
3UTR GCA 72 bp TCTTGCCAGTTTCCTAGTGAGACCCATGGAGTATCTTaGTCCCTTGGGCCTCAACTTTGCCTTTTTCCATAT +
Preference number: 3 (lower is better)
Translates to: SCQFPSETHGVS*SLGPQLCLFPY
Trigger: ATATGGAAAAAGGCAAAGTTGAGGCCCAAGGGAGCAAGATACTCCATGGGTCTCACTAGGAAACTGGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGGCCAGGCGGAGGCGTaGGTCTGCCTCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARGQAEA*VCLHIL
Trigger: GAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAGGGTTGCCAGCAGCTaGGCAGCGGAAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARRVASS*AAEADS
Trigger: ACTGTCCGCTTCCGCTGCCCAGCTGCTGGCAACCCT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAAGCTCCACTGCTGGTaGCGGAGCTTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARKLHCW*RSLMPP
Trigger: TGGGGGCATCAAGCTCCGGCACCAGCAGTGGAGCTT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAGACCTTGTGCACGGTaGGCGAGCCCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARRPCAR*ASPSPS
Trigger: AGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCCGGAGATTGCCCTTaGCTGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARPGDCP*LRTPPA
Trigger: TGCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGGAGTAGTCCATGCCTaGAGGCCGCCGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNGVVHA*RPPRPK
Trigger: CTTCGGGCGCGGCGGCCTCCAGGCATGGACTACTCC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARRVLAT*RVLLKR
Trigger: CCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAGACCACCCCGTAGCTaGGGACGCCTGCGTACACGC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRPPRS*GRLRTR
Trigger: GCGTGTACGCAGGCGTCCTCAGCTACGGGGTGGTCT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARLPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCAAAGGAGTAGTCCATaGCTGGAGGCCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNQRSSP*LEAAAP
Trigger: GGGCGCGGCGGCCTCCAGGCATGGACTACTCCTTTG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARHNSLL*TRRLGS
Trigger: ACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGGAGTAGTCCATGCCTaGAGGCCGCCGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPGVVHA*RPPRPK
Trigger: CTTCGGGCGCGGCGGCCTCCAGGCATGGACTACTCC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGGAGTAGTCCATGCCTaGAGGCCGCCGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPGVVHA*RPPRPK
Trigger: CTTCGGGCGCGGCGGCCTCCAGGCATGGACTACTCC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGGAGTAGTCCATGCCTaGAGGCCGCCGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLGVVHA*RPPRPK
Trigger: CTTCGGGCGCGGCGGCCTCCAGGCATGGACTACTCC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGGAGTAGTCCATGCCTaGAGGCCGCCGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTGVVHA*RPPRPK
Trigger: CTTCGGGCGCGGCGGCCTCCAGGCATGGACTACTCC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGGTCATGTGTGCAGCTaGCTGGCTTGTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARGHVCS*LACPCG
Trigger: ACCGCATGGACAAGCCAGCCAGCTGCACACATGACC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCCCGCTCCGACACATTaGCCAGGCGGAGGCGTGCGT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGPAPTH*PGGGVR
Trigger: ACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGAGACCACCCCGTAGCTaGGGACGCCTGCGTACACGC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRPPRS*GRLRTR
Trigger: GCGTGTACGCAGGCGTCCTCAGCTACGGGGTGGTCT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGACCACCCCGTAGCTaGGGACGCCTGCGTACACGC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRPPRS*GRLRTR
Trigger: GCGTGTACGCAGGCGTCCTCAGCTACGGGGTGGTCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGCAGCTGTAGACCCCTaGATCTTCGTGGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARAAVDP*IFVGGI
Trigger: AATGCCTCCCACGAAGATGCAGGGGTCTACAGCTGC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGTAGCTGAGGACGCCTaGGTACACGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNVAEDA*VHAASL
Trigger: GAGGCTGGCAGCGTGTACGCAGGCGTCCTCAGCTAC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCAAAGGAGTAGTCCATaGCTGGAGGCCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGQRSSP*LEAAAP
Trigger: GGGCGCGGCGGCCTCCAGGCATGGACTACTCCTTTG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCAAAGGAGTAGTCCATaGCTGGAGGCCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPQRSSP*LEAAAP
Trigger: GGGCGCGGCGGCCTCCAGGCATGGACTACTCCTTTG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAGACCGTGGGCCCTGTaGGGGCACCTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRPWAL*GHLQED
Trigger: ATCCTCCTGGAGGTGCCCCCACAGGGCCCACGGTCT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAAGACCGTGGGCCCTGTaGGGGCACCTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLRPWAL*GHLQED
Trigger: ATCCTCCTGGAGGTGCCCCCACAGGGCCCACGGTCT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGAGACCGTGGGCCCTGTaGGGGCACCTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGRPWAL*GHLQED
Trigger: ATCCTCCTGGAGGTGCCCCCACAGGGCCCACGGTCT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAGGGTTGCCAGCAGCTaGGCAGCGGAAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRVASS*AAEADS
Trigger: ACTGTCCGCTTCCGCTGCCCAGCTGCTGGCAACCCT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAACGTGCTTCAGCCACTaGATGTGTGGCTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARTCFSH*MCGCAS
Trigger: CGATGCACAGCCACACATCCAGTGGCTGAAGCACGT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARWIAPT*GQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAGACCACCCCGTAGCTaGGGACGCCTGCGTACACGC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRPPRS*GRLRTR
Trigger: GCGTGTACGCAGGCGTCCTCAGCTACGGGGTGGTCT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAAGCTCCACTGCTGGTaGCGGAGCTTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNKLHCW*RSLMPP
Trigger: TGGGGGCATCAAGCTCCGGCACCAGCAGTGGAGCTT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGTAGCTGAGGACGCCTaGGTACACGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLVAEDA*VHAASL
Trigger: GAGGCTGGCAGCGTGTACGCAGGCGTCCTCAGCTAC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGTAGCTGAGGACGCCTaGGTACACGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPVAEDA*VHAASL
Trigger: GAGGCTGGCAGCGTGTACGCAGGCGTCCTCAGCTAC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCAAAGGAGTAGTCCATaGCTGGAGGCCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVQRSSP*LEAAAP
Trigger: GGGCGCGGCGGCCTCCAGGCATGGACTACTCCTTTG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGGCCAGGCGGAGGCGTaGGTCTGCCTCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVGQAEA*VCLHIL
Trigger: GAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGCACCTCCAGGAGGATaGCAGCTCAGCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPAPPGG*QLSSTV
Trigger: CACCGTGGAGCTGAGCTGCCATCCTCCTGGAGGTGC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGCACCTCCAGGAGGATaGCAGCTCAGCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPAPPGG*QLSSTV
Trigger: CACCGTGGAGCTGAGCTGCCATCCTCCTGGAGGTGC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGGCACCTCCAGGAGGATaGCAGCTCAGCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGAPPGG*QLSSTV
Trigger: CACCGTGGAGCTGAGCTGCCATCCTCCTGGAGGTGC...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAGACCGTGGGCCCTGTaGGGGCACCTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRPWAL*GHLQED
Trigger: ATCCTCCTGGAGGTGCCCCCACAGGGCCCACGGTCT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAGGGTTGCCAGCAGCTaGGCAGCGGAAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRVASS*AAEADS
Trigger: ACTGTCCGCTTCCGCTGCCCAGCTGCTGGCAACCCT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGGGTTGCCAGCAGCTaGGCAGCGGAAGCGGACAGT +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRVASS*AAEADS
Trigger: ACTGTCCGCTTCCGCTGCCCAGCTGCTGGCAACCCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCCGGAGATTGCCCTTaGCTGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPGDCP*LRTPPA
Trigger: TGCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATATGTGTGCAGCTGGCTaGCTTGTCCATGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNMCAAG*LVHAVA
Trigger: GGCCACCGCATGGACAAGCCAGCCAGCTGCACACAT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRVLAT*RVLLKR
Trigger: CCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNLPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCTAGATCCTTGCAGGTaGGCTGTTCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNLDPCR*AVPLAA
Trigger: GGCTGCCAGAGGAACAGCTCACCTGCAAGGATCTAG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACTGCCGAAGGCCACCTaGTCCTGCTGGCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPLPKAT*SCWLGS
Trigger: TGAACCTAGCCAGCAGGAGCAGGTGGCCTTCGGCAG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCTGCCGAAGGCCACCTaGTCCTGCTGGCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGLPKAT*SCWLGS
Trigger: TGAACCTAGCCAGCAGGAGCAGGTGGCCTTCGGCAG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTGCCGAAGGCCACCTaGTCCTGCTGGCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLPKAT*SCWLGS
Trigger: TGAACCTAGCCAGCAGGAGCAGGTGGCCTTCGGCAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAAGCTCCACTGCTGGTaGCGGAGCTTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCKLHCW*RSLMPP
Trigger: TGGGGGCATCAAGCTCCGGCACCAGCAGTGGAGCTT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAAGCTCCACTGCTGGTaGCGGAGCTTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPKLHCW*RSLMPP
Trigger: TGGGGGCATCAAGCTCCGGCACCAGCAGTGGAGCTT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGGCCCACCTTGCTaGCGTTCACTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTQGPPC*RSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCAGGGCCCACCTTGCTaGCGTTCACTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPQGPPC*RSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCAGGGCCCACCTTGCTaGCGTTCACTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGQGPPC*RSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACAGGGCCCACCTTGCTaGCGTTCACTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPQGPPC*RSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCGTCAGGGCCCACCTTaGTGCCGTTCACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRQGPP*CRSLPR
Trigger: ACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACGTCAGGGCCCACCTTaGTGCCGTTCACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLRQGPP*CRSLPR
Trigger: ACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCGTCAGGGCCCACCTTaGTGCCGTTCACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGRQGPP*CRSLPR
Trigger: ACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGCACCTCCAGGAGGATaGCAGCTCAGCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVAPPGG*QLSSTV
Trigger: CACCGTGGAGCTGAGCTGCCATCCTCCTGGAGGTGC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAGACCTTGTGCACGGTaGGCGAGCCCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRPCAR*ASPSPS
Trigger: AGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGAGACCTTGTGCACGGTaGGCGAGCCCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRPCAR*ASPSPS
Trigger: AGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGACCTTGTGCACGGTaGGCGAGCCCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRPCAR*ASPSPS
Trigger: AGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAGACCTTGTGCACGGTaGGCGAGCCCAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRPCAR*ASPSPS
Trigger: AGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCCGGAGATTGCCCTTaGCTGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPGDCP*LRTPPA
Trigger: TGCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCCGGAGATTGCCCTTaGCTGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPGDCP*LRTPPA
Trigger: TGCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAATGTGTGCAGCTGGCTaGCTTGTCCATGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPMCAAG*LVHAVA
Trigger: GGCCACCGCATGGACAAGCCAGCCAGCTGCACACAT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCATGTGTGCAGCTGGCTaGCTTGTCCATGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPMCAAG*LVHAVA
Trigger: GGCCACCGCATGGACAAGCCAGCCAGCTGCACACAT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAATGTGTGCAGCTGGCTaGCTTGTCCATGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLMCAAG*LVHAVA
Trigger: GGCCACCGCATGGACAAGCCAGCCAGCTGCACACAT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRVLAT*RVLLKR
Trigger: CCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGG +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGRVLAT*RVLLKR
Trigger: CCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCTGTTACACGCACACTaGAGTGGCACAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCLLHAH*SGTAHA
Trigger: GGCGTGTGCTGTGCCACTTCAGTGTGCGTGTAACAG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACTGTTACACGCACACTaGAGTGGCACAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLLLHAH*SGTAHA
Trigger: GGCGTGTGCTGTGCCACTTCAGTGTGCGTGTAACAG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTGTTACACGCACACTaGAGTGGCACAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLLHAH*SGTAHA
Trigger: GGCGTGTGCTGTGCCACTTCAGTGTGCGTGTAACAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGLPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPLPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCTAGATCCTTGCAGGTaGGCTGTTCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPLDPCR*AVPLAA
Trigger: GGCTGCCAGAGGAACAGCTCACCTGCAAGGATCTAG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCTAGATCCTTGCAGGTaGGCTGTTCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTLDPCR*AVPLAA
Trigger: GGCTGCCAGAGGAACAGCTCACCTGCAAGGATCTAG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCTCTTTCAACAGCTTaGAAAGCTCTTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARPLSTA*KALPLG
Trigger: TCCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCTGCCGAAGGCCACCTaGTCCTGCTGGCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVLPKAT*SCWLGS
Trigger: TGAACCTAGCCAGCAGGAGCAGGTGGCCTTCGGCAG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCAGGGCCCACCTTGCTaGCGTTCACTTCCACGTGCT +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVQGPPC*RSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCGTCAGGGCCCACCTTaGTGCCGTTCACTTCCACGT +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRQGPP*CRSLPR
Trigger: ACGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACCTTCTTTGGGGGACTaGGCAGGCGGCAGAGTATCA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPPSLGD*AGGRVS
Trigger: TGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCCTTCTTTGGGGGACTaGGCAGGCGGCAGAGTATCA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTPSLGD*AGGRVS
Trigger: TGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCTTCTTTGGGGGACTaGGCAGGCGGCAGAGTATCA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPSLGD*AGGRVS
Trigger: TGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCCTTCTTTGGGGGACTaGGCAGGCGGCAGAGTATCA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGPSLGD*AGGRVS
Trigger: TGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACCTTCTTTGGGGGACTaGGCAGGCGGCAGAGTATCA +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLPSLGD*AGGRVS
Trigger: TGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LGEPFKRQGATASLVEARDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAAGCCAAGTATTCCATaGCCCGTGCCACCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNKPSIP*PVPPGR
Trigger: CCTACCAGGTGGCACGGGGCATGGAATACTTGGCTT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATTGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPHNSLL*TRRLGS
Trigger: ACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCHNSLL*TRRLGS
Trigger: ACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGHNSLL*TRRLGS
Trigger: ACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCGTCACTGCCTAGAATaGCTGTCTGGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRHCLE*LSGWPA
Trigger: TGCCGGCCAACCAGACAGCCATTCTAGGCAGTGACG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACGTCACTGCCTAGAATaGCTGTCTGGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRHCLE*LSGWPA
Trigger: TGCCGGCCAACCAGACAGCCATTCTAGGCAGTGACG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCGTCACTGCCTAGAATaGCTGTCTGGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGRHCLE*LSGWPA
Trigger: TGCCGGCCAACCAGACAGCCATTCTAGGCAGTGACG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATACGTGCTTCAGCCACTaGATGTGTGGCTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNTCFSH*MCGCAS
Trigger: CGATGCACAGCCACACATCCAGTGGCTGAAGCACGT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGGTCATGTGTGCAGCTaGCTGGCTTGTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLGHVCS*LACPCG
Trigger: ACCGCATGGACAAGCCAGCCAGCTGCACACATGACC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCTGTTACACGCACACTaGAGTGGCACAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVLLHAH*SGTAHA
Trigger: GGCGTGTGCTGTGCCACTTCAGTGTGCGTGTAACAG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCCTCTACCAACTGCTTaGAGGTGGGCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTPLPTA*RWASVK
Trigger: CTTCACAGAGGCCCACCTTCAAGCAGTTGGTAGAGG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCAGCTGTAGACCCCTaGATCTTCGTGGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLAAVDP*IFVGGI
Trigger: AATGCCTCCCACGAAGATGCAGGGGTCTACAGCTGC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGCAGCTGTAGACCCCTaGATCTTCGTGGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTAAVDP*IFVGGI
Trigger: AATGCCTCCCACGAAGATGCAGGGGTCTACAGCTGC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGAGATTGCCCTTGGCTaGGTACTCCACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNEIALG*VLHQHI
Trigger: TATGTGCTGGTGGAGTACGCAGCCAAGGGCAATCTC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGTTCCTCTGGCAGCCTaGAGGCATCAAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNVPLAA*RHQRSS
Trigger: ACTACTCCTTTGATGCCTGCAGGCTGCCAGAGGAAC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAAGCCAAGTATTCCATaGCCCGTGCCACCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPKPSIP*PVPPGR
Trigger: CCTACCAGGTGGCACGGGGCATGGAATACTTGGCTT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGAAGCCAAGTATTCCATaGCCCGTGCCACCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGKPSIP*PVPPGR
Trigger: CCTACCAGGTGGCACGGGGCATGGAATACTTGGCTT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGTGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCATGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGTGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCGTCACTGCCTAGAATaGCTGTCTGGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRHCLE*LSGWPA
Trigger: TGCCGGCCAACCAGACAGCCATTCTAGGCAGTGACG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAAQALL*GTAQAA
Trigger: TGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCWIAPT*GQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCA...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTATGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLWIAPT*GQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCA...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPWIAPT*GQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGGAACTCCACGTCACTaGCTAGAATGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTGTPRH*LEWLSG
Trigger: ACCAGACAGCCATTCTAGGCAGTGACGTGGAGTTCC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGGAACTCCACGTCACTaGCTAGAATGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPGTPRH*LEWLSG
Trigger: ACCAGACAGCCATTCTAGGCAGTGACGTGGAGTTCC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGGTGGTGTTAGCGCCTaGAGTCTTGAGTACAGTGAC +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPGGVSA*SLEYSD
Trigger: GTCACTGTACTCAAGACTGCAGGCGCTAACACCACC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGGTGGTGTTAGCGCCTaGAGTCTTGAGTACAGTGAC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPGGVSA*SLEYSD
Trigger: GTCACTGTACTCAAGACTGCAGGCGCTAACACCACC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGCAGAGTATCACAGCTaGCACCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTAEYHS*HHQDEE
Trigger: CTCTTCATCCTGGTGGTGGCAGCTGTGATACTCTGC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGCAGAGTATCACAGCTaGCACCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPAEYHS*HHQDEE
Trigger: CTCTTCATCCTGGTGGTGGCAGCTGTGATACTCTGC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGAGATTGCCCTTGGCTaGGTACTCCACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPEIALG*VLHQHI
Trigger: TATGTGCTGGTGGAGTACGCAGCCAAGGGCAATCTC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGAGATTGCCCTTGGCTaGGTACTCCACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTEIALG*VLHQHI
Trigger: TATGTGCTGGTGGAGTACGCAGCCAAGGGCAATCTC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGTTCCTCTGGCAGCCTaGAGGCATCAAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTVPLAA*RHQRSS
Trigger: ACTACTCCTTTGATGCCTGCAGGCTGCCAGAGGAAC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGTTCCTCTGGCAGCCTaGAGGCATCAAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPVPLAA*RHQRSS
Trigger: ACTACTCCTTTGATGCCTGCAGGCTGCCAGAGGAAC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAAGCCAAGTATTCCATaGCCCGTGCCACCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVKPSIP*PVPPGR
Trigger: CCTACCAGGTGGCACGGGGCATGGAATACTTGGCTT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCCTAGAATGGCTGTCTaGTTGGCCGGCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAPRMAV*LAGSPA
Trigger: GGCTGGGCTGCCGGCCAACCAGACAGCCATTCTAGG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCACGTGCTTCAGCCACTaGATGTGTGGCTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVTCFSH*MCGCAS
Trigger: CGATGCACAGCCACACATCCAGTGGCTGAAGCACGT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCACCAGCCACGCAGAGTaGTGGGAAAACCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPTSHAE*WENPIE
Trigger: TTCTATTGGGTTTTCCCATCACTCTGCGTGGCTGGT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGACCAGCCACGCAGAGTaGTGGGAAAACCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGTSHAE*WENPIE
Trigger: TTCTATTGGGTTTTCCCATCACTCTGCGTGGCTGGT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGACCAGCCACGCAGAGTaGTGGGAAAACCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTTSHAE*WENPIE
Trigger: TTCTATTGGGTTTTCCCATCACTCTGCGTGGCTGGT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCTCTCAGCCACGCCTATaGAATTGGTGGCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVSQPRL*NWWLDR
Trigger: TCTGTCGAGCCACCAATTTCATAGGCGTGGCTGAGA...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCACCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGGAACTCCACGTCACTaGCTAGAATGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVGTPRH*LEWLSG
Trigger: ACCAGACAGCCATTCTAGGCAGTGACGTGGAGTTCC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGTAGCCGGCCATTTGTaGTCTTCTTGTAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNVAGHL*SSCSSP
Trigger: TGGACTACTACAAGAAGACCACAAATGGCCGGCTAC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCACCAGCCACGCAGAGTaGTGGGAAAACCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVTSHAE*WENPIE
Trigger: TTCTATTGGGTTTTCCCATCACTCTGCGTGGCTGGT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCTGCCACCACCAGGATaGAGAGGAAGAAGACCACCC +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWALPPPG*RGRRPP
Trigger: GGGTGGTCTTCTTCCTCTTCATCCTGGTGGTGGCAG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGCCTCTTTCAACAGCTTaGAAAGCTCTTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGPLSTA*KALPLG
Trigger: TCCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGG...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCTCTTTCAACAGCTTaGAAAGCTCTTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPLSTA*KALPLG
Trigger: TCCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAAATCCTCTACCAACTaGTTGAAGGTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPKSSTN*LKVGLC
Trigger: ACAGAGGCCCACCTTCAAGCAGTTGGTAGAGGATTT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGAAATCCTCTACCAACTaGTTGAAGGTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGKSSTN*LKVGLC
Trigger: ACAGAGGCCCACCTTCAAGCAGTTGGTAGAGGATTT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCGTCACTGCCTAGAATaGCTGTCTGGTTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWARHCLE*LSGWPA
Trigger: TGCCGGCCAACCAGACAGCCATTCTAGGCAGTGACG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGGTAGCCGGCCATTTGTaGTCTTCTTGTAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTVAGHL*SSCSSP
Trigger: TGGACTACTACAAGAAGACCACAAATGGCCGGCTAC...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGTAGCCGGCCATTTGTaGTCTTCTTGTAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPVAGHL*SSCSSP
Trigger: TGGACTACTACAAGAAGACCACAAATGGCCGGCTAC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGTAGCCGGCCATTTGTaGTCTTCTTGTAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLVAGHL*SSCSSP
Trigger: TGGACTACTACAAGAAGACCACAAATGGCCGGCTAC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGGTCATGTGTGCAGCTaGCTGGCTTGTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAGHVCS*LACPCG
Trigger: ACCGCATGGACAAGCCAGCCAGCTGCACACATGACC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAGACCACCCCGTAGCTaGGGACGCCTGCGTACACGC +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPRPPRS*GRLRTR
Trigger: GCGTGTACGCAGGCGTCCTCAGCTACGGGGTGGTCT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCCTCTTTCAACAGCTTaGAAAGCTCTTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVPLSTA*KALPLG
Trigger: TCCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGCTGCTTGGGGCCCGTaGACACGCAGCCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPAAWGP*TRSQKA
Trigger: GGCCTTTTGGCTGCGTGTTCACGGGCCCCAAGCAGC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR GCA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCATGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GCTGWASYILVWCSWPWPCMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGTGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTCMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPCMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCAAAGGTGACATTGTaGAAGGACAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GPEPQGCTGWASYILVWCSKVTL*KDRTSS
Trigger: GCTAGAGGTTCTGTCCTTGCACAATGTCACCTTTGA...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCTCAAAGGTGACATTGTaGAAGGACAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPSKVTL*KDRTSS
Trigger: GCTAGAGGTTCTGTCCTTGCACAATGTCACCTTTGA...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAAATCCTCTACCAACTaGTTGAAGGTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVKSSTN*LKVGLC
Trigger: ACAGAGGCCCACCTTCAAGCAGTTGGTAGAGGATTT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAGACCGTGGGCCCTGTaGGGGCACCTCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPRPWAL*GHLQED
Trigger: ATCCTCCTGGAGGTGCCCCCACAGGGCCCACGGTCT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTACGTGCTTCAGCCACTaGATGTGTGGCTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWATCFSH*MCGCAS
Trigger: CGATGCACAGCCACACATCCAGTGGCTGAAGCACGT...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTTGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAWIAPT*GQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCA...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGAGGCCCCACCAGGATaGGGTGGGAGGCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEEAPPG*GGRPPD
Trigger: GTCTGGTGGCCTCCCACCGCATCCTGGTGGGGCCTC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGGTGGTGTTAGCGCCTaGAGTCTTGAGTACAGTGAC +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAGGVSA*SLEYSD
Trigger: GTCACTGTACTCAAGACTGCAGGCGCTAACACCACC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCTCAAAGGTGACATTGTaGAAGGACAGAACCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVSKVTL*KDRTSS
Trigger: GCTAGAGGTTCTGTCCTTGCACAATGTCACCTTTGA...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGTAGCTGAGGACGCCTaGGTACACGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPVAEDA*VHAASL
Trigger: GAGGCTGGCAGCGTGTACGCAGGCGTCCTCAGCTAC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGCAGAGTATCACAGCTaGCACCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAAEYHS*HHQDEE
Trigger: CTCTTCATCCTGGTGGTGGCAGCTGTGATACTCTGC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGAGATTGCCCTTGGCTaGGTACTCCACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAEIALG*VLHQHI
Trigger: TATGTGCTGGTGGAGTACGCAGCCAAGGGCAATCTC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGTTCCTCTGGCAGCCTaGAGGCATCAAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAVPLAA*RHQRSS
Trigger: ACTACTCCTTTGATGCCTGCAGGCTGCCAGAGGAAC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGCTGCTTGGGGCCCGTaGACACGCAGCCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEAAWGP*TRSQKA
Trigger: GGCCTTTTGGCTGCGTGTTCACGGGCCCCAAGCAGC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCTGCCGAAGGCCACCTaGTCCTGCTGGCTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPLPKAT*SCWLGS
Trigger: TGAACCTAGCCAGCAGGAGCAGGTGGCCTTCGGCAG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAAGCTCCACTGCTGGTaGCGGAGCTTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPKLHCW*RSLMPP
Trigger: TGGGGGCATCAAGCTCCGGCACCAGCAGTGGAGCTT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACAAAGGAGTAGTCCATaGCTGGAGGCCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEQRSSP*LEAAAP
Trigger: GGGCGCGGCGGCCTCCAGGCATGGACTACTCCTTTG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCACCAAGCTCCACTGCTaGTGCCGGAGCTTGATGCCC +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPTKLHC*CRSLMP
Trigger: GGGCATCAAGCTCCGGCACCAGCAGTGGAGCTTGGT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACAGGATGGGCCGGTGTaGGGAGCGCTCCAGCACATC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEQDGPV*GALQHI
Trigger: GATGTGCTGGAGCGCTCCCCACACCGGCCCATCCTG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGTAGCTGAGGACGCCTaGGTACACGCTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEVAEDA*VHAASL
Trigger: GAGGCTGGCAGCGTGTACGCAGGCGTCCTCAGCTAC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTAAATCCTCTACCAACTaGTTGAAGGTGGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAKSSTN*LKVGLC
Trigger: ACAGAGGCCCACCTTCAAGCAGTTGGTAGAGGATTT...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGCACCTCCAGGAGGATaGCAGCTCAGCTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEAPPGG*QLSSTV
Trigger: CACCGTGGAGCTGAGCTGCCATCCTCCTGGAGGTGC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGGTCATGTGTGCAGCTaGCTGGCTTGTCCATGCGGT +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPGHVCS*LACPCG
Trigger: ACCGCATGGACAAGCCAGCCAGCTGCACACATGACC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTTGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: PRINTQEVLSTVGPLHWACMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTGGCTGGCTTGTCCATaGGGTGGCCCTCTTTCAACA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPWLACP*GGPLST
Trigger: TGTTGAAAGAGGGCCACCGCATGGACAAGCCAGCCA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCACGTGCTTCAGCCACTaGATGTGTGGCTGTGCATCG +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPTCFSH*MCGCAS
Trigger: CGATGCACAGCCACACATCCAGTGGCTGAAGCACGT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACCCGGAGATTGCCCTTaGCTGCGTACTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEPGDCP*LRTPPA
Trigger: TGCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAATGTGTGCAGCTGGCTaGCTTGTCCATGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEMCAAG*LVHAVA
Trigger: GGCCACCGCATGGACAAGCCAGCCAGCTGCACACAT...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACTGTTACACGCACACTaGAGTGGCACAGCACACGCC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATELLHAH*SGTAHA
Trigger: GGCGTGTGCTGTGCCACTTCAGTGTGCGTGTAACAG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACTAGATCCTTGCAGGTaGGCTGTTCCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATELDPCR*AVPLAA
Trigger: GGCTGCCAGAGGAACAGCTCACCTGCAAGGATCTAG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGCAGAGTATCACAGCTaGCACCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPAEYHS*HHQDEE
Trigger: CTCTTCATCCTGGTGGTGGCAGCTGTGATACTCTGC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGTTCCTCTGGCAGCCTaGAGGCATCAAAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPVPLAA*RHQRSS
Trigger: ACTACTCCTTTGATGCCTGCAGGCTGCCAGAGGAAC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEHNSLL*TRRLGS
Trigger: ACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGCAGCTGTAGACCCCTaGATCTTCGTGGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEAAVDP*IFVGGI
Trigger: AATGCCTCCCACGAAGATGCAGGGGTCTACAGCTGC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCCTCTTTCAACAGCTTaGAAAGCTCTTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPPLSTA*KALPLG
Trigger: TCCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR TCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAATCTCAGCCACGCCTATaGAATTGGTGGCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATESQPRL*NWWLDR
Trigger: TCTGTCGAGCCACCAATTTCATAGGCGTGGCTGAGA...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGGAACTCCACGTCACTaGCTAGAATGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEGTPRH*LEWLSG
Trigger: ACCAGACAGCCATTCTAGGCAGTGACGTGGAGTTCC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGCAGAGTATCACAGCTaGCACCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEAEYHS*HHQDEE
Trigger: CTCTTCATCCTGGTGGTGGCAGCTGTGATACTCTGC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGATGCCAATAGCTTCTaGCATGACCACCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPDANSF*HDHLSK
Trigger: TTTGGACAGGTGGTCATGGCAGAAGCTATTGGCATC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGAGATTGCCCTTGGCTaGGTACTCCACCAGCACATA +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEEIALG*VLHQHI
Trigger: TATGTGCTGGTGGAGTACGCAGCCAAGGGCAATCTC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCGTAGCCGGCCATTTGTaGTCTTCTTGTAGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPVAGHL*SSCSSP
Trigger: TGGACTACTACAAGAAGACCACAAATGGCCGGCTAC...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACCCCTCGGAATTCTTTaGCATTCTTCAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATEPLGIL*HSSARR
Trigger: TCTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPCMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR GCA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAATGTATGTCTGCCGGATaGTGCCAAACTTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ESSYINLIPHKRGPKATECMSAG*CQTCSQ
Trigger: TTGAGAACAAGTTTGGCAGCATCCGGCAGACATACA...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARSPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCGTCAGGGCCCACCTaGCTGCCGTTCACTTCCACG +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARPSGPT*LPFTST
Trigger: CGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 90 bp CTAGGTTCAGGCCCTGGAACCTCTGCCGCTCTCCGCACAACTCGCTaGTCTGGACCAGGAGGCTCGGAAGTAGCTCCAGCCACGACCGCC +
Preference number: 5 (lower is better)
Translates to: LGSGPGTSAALRTTR*SGPGGSEVAPATTA
Trigger: GGCGGTCGTGGCTGGAGCTACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTGCGGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201437.4
ENSMUST00000202138.4
ENSMUST00000202182.2
CDS CCA 90 bp TTCAGGCCCTGGAACCTCTGCCGCTCTCCGCACAACTCGCTGCTCTaGACCAGGAGGCTCGGAAGTAGCTCCAGCCACGACCGCCACGCA +
Preference number: 5 (lower is better)
Translates to: FRPWNLCRSPHNSLL*TRRLGSSSSHDRHA
Trigger: TGCGTGGCGGTCGTGGCTGGAGCTACTTCCGAGCCTCCTGGTCCAGAGCAGCGAGTTGTGCGGAGAGCGGCAGAGGTTCCAGGGCCTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201437.4
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGAGCCACGGTGACAGGCTaGGCAGTACGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARATVTG*AVRSLS
Trigger: CGACAAGGACCGTACTGCCAAGCCTGTCACCGTGGC...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATCCCGGAGATTGCCCTaGGCTGCGTACTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARSRRLP*AAYSTS
Trigger: GCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGGA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATTCCCGCTCCGACACATaGGCCAGGCGGAGGCGTGCG +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNSRSDT*ARRRRA
Trigger: CGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGA...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS GCA 90 bp GCCCCCGTCCCGCTCCGACACATTGGCCAGGCGGAGGCGTGCGTCTaGCTCCACATTCTCACTGATCCAGGACTTGCTGCCGTTCACTTC +
Preference number: 5 (lower is better)
Translates to: APVPLRHIGQAEACV*LHILTDPGLAAVHF
Trigger: GAAGTGAACGGCAGCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201295.2
CDS GCA 90 bp GTACTCGCCCCCGTCCCGCTCCGACACATTGGCCAGGCGGAGGCGTaGGTCTGCCTCCACATTCTCACTGATCCAGGACTTGCTGCCGTT +
Preference number: 5 (lower is better)
Translates to: VLAPVPLRHIGQAEA*VCLHILTDPGLAAV
Trigger: AACGGCAGCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000201295.2
CDS CCA 90 bp GAAGCGAGAGACCTTGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCAGAGTATCACAGCTGCCACCACCAG +
Preference number: 5 (lower is better)
Translates to: EARDLVHGGRAQALL*GTAQAAEYHSCHHQ
Trigger: CTGGTGGTGGCAGCTGTGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
CDS CCA 90 bp GTCCGAGGTCCCCCGTTACTGGGTGGACCTGGGGGTAGCAGGTCATaGGTGAACACCGAGTCATCTCCGGACGAGCTGGAGCTAGGCGTG +
Preference number: 5 (lower is better)
Translates to: VRGPPLLGGPGGSRS*VNTESSPDELELGV
Trigger: CACGCCTAGCTCCAGCTCGTCCGGAGATGACTCGGTGTTCACCCATGACCTGCTACCCCCAGGTCCACCCAGTAACGGGGGACCTCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATATGGAGGGGGTAGGGTaGCCAGCAGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCTGCTGGCAACCCTACCCCCTCCAT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARLDSSH*GSAGSS
Trigger: TGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCATCCCGCTCCGACACATaGGCCAGGCGGAGGCGTGCG +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPSRSDT*ARRRRA
Trigger: CGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGA...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS GCA 90 bp TCCAAGGACACCTGCTGTCGCTTAAGCGGGAAGCGAGAGACCTTGTaGACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGACTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SKDTCCRLSGKRETL*TVGEPKPFFGGLRR
Trigger: CCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGCAGGTGTCCTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS-3UTR CAA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGATGGAGGGGGTAGGGTaGCCAGCAGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCTGCTGGCAACCCTACCCCCTCCAT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAATGGAGGGGGTAGGGTaGCCAGCAGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCTGCTGGCAACCCTACCCCCTCCAT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAATGGAGGGGGTAGGGTaGCCAGCAGCTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLMEGVG*PAAGQR
Trigger: CCGCTGCCCAGCTGCTGGCAACCCTACCCCCTCCAT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPSPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLSPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPSPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPGKRET*CTVGEP
Trigger: GGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGTGCAGCTGGCTGGCTaGTCCATGCGGTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNVQLAG*SMRWPS
Trigger: AGAGGGCCACCGCATGGACAAGCCAGCCAGCTGCAC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 90 bp GATTCCAAGGACACCTGTCGCTTAAGCGGGAAGCGAGAGACCTTGTaGACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGACTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: DSKDTCRLSGKRETL*TVGEPKPFFGGLRR
Trigger: CCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGGTGTCCTTGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 90 bp CCGGACGAGCTGGAGCTAGGCGTGTCCTGGCCACCTGGCGAGTACTaGTCAAACGGCACGGAGAGGTCCAAGTACTCGTCGGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: PDELELGVSWPPGEY*SNGTERSKYSSVDV
Trigger: GACATCAACCGACGAGTACTTGGACCTCTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAGCTCGTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 90 bp GCCCCCGTCCCGCTCCGACACATTGGCCAGGCGGAGGCGTGCGTCTaGCTCCACATTCTCACTGATCCAGGACTTGAGTACAGTGACGTA +
Preference number: 5 (lower is better)
Translates to: APVPLRHIGQAEACV*LHILTDPGLEYSDV
Trigger: TACGTCACTGTACTCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
CDS GCA 90 bp GTACTCGCCCCCGTCCCGCTCCGACACATTGGCCAGGCGGAGGCGTaGGTCTGCCTCCACATTCTCACTGATCCAGGACTTGAGTACAGT +
Preference number: 5 (lower is better)
Translates to: VLAPVPLRHIGQAEA*VCLHILTDPGLEYS
Trigger: ACTGTACTCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
CDS CCA 90 bp CGAGTCATCTCCGGACGAGCTGGAGCTAGGCGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGGCACGGAGAGGTCCAAGTACTCGTC +
Preference number: 5 (lower is better)
Translates to: RVISGRAGARRVLAT*RVLLKRHGEVQVLV
Trigger: GACGAGTACTTGGACCTCTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAGCTCGTCCGGAGATGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS CCA 90 bp GTGAACACCGAGTCATCTCCGGACGAGCTGGAGCTAGGCGTGTCCTaGCCACCTGGCGAGTACTGCTCAAACGGCACGGAGAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: VNTESSPDELELGVS*PPGEYCSNGTERSK
Trigger: CTTGGACCTCTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAGCTCGTCCGGAGATGACTCGGTGTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCCGTCAGGGCCCACCTaGCTGCCGTTCACTTCCACG +
Preference number: 5 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTPSGPT*LPFTST
Trigger: CGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACGG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCGTCAGGGCCCACCTaGCTGCCGTTCACTTCCACG +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPSGPT*LPFTST
Trigger: CGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVGKRET*CTVGEP
Trigger: GGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATGCCACGGTGACAGGCTaGGCAGTACGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNATVTG*AVRSLS
Trigger: CGACAAGGACCGTACTGCCAAGCCTGTCACCGTGGC...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATTCCCGGAGATTGCCCTaGGCTGCGTACTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNSRRLP*AAYSTS
Trigger: GCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGGA...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCGTGCAGCTGGCTGGCTaGTCCATGCGGTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPVQLAG*SMRWPS
Trigger: AGAGGGCCACCGCATGGACAAGCCAGCCAGCTGCAC...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAGTGCAGCTGGCTGGCTaGTCCATGCGGTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPVQLAG*SMRWPS
Trigger: AGAGGGCCACCGCATGGACAAGCCAGCCAGCTGCAC...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGTGCAGCTGGCTGGCTaGTCCATGCGGTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLVQLAG*SMRWPS
Trigger: AGAGGGCCACCGCATGGACAAGCCAGCCAGCTGCAC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCCWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCATGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPCWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGTGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTCWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNLDSSH*GSAGSS
Trigger: TGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCGCCACGGTGACAGGCTaGGCAGTACGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCATVTG*AVRSLS
Trigger: CGACAAGGACCGTACTGCCAAGCCTGTCACCGTGGC...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTATCCCGGAGATTGCCCTaGGCTGCGTACTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLSRRLP*AAYSTS
Trigger: GCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGGA...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCTGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVCWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCLDSSH*GSAGSS
Trigger: TGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCGCCACGGTGACAGGCTaGGCAGTACGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVATVTG*AVRSLS
Trigger: CGACAAGGACCGTACTGCCAAGCCTGTCACCGTGGC...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGAGGAACTCCCGGAGATaGCCCTTGGCTGCGTACTCC +
Preference number: 5 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRNSRR*PLAAYS
Trigger: GGAGTACGCAGCCAAGGGCAATCTCCGGGAGTTCCT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAGGAACTCCCGGAGATaGCCCTTGGCTGCGTACTCC +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRNSRR*PLAAYS
Trigger: GGAGTACGCAGCCAAGGGCAATCTCCGGGAGTTCCT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGGAACTCCCGGAGATaGCCCTTGGCTGCGTACTCC +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRNSRR*PLAAYS
Trigger: GGAGTACGCAGCCAAGGGCAATCTCCGGGAGTTCCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACCCTCTTTCAACAGCTaGAAAAGCTCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARPSFNS*KSSSTG
Trigger: CCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGGG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGACGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARRMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCT +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRTSSS*SVVLAP
Trigger: AGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CTAGGAGAGCCATTCAAGCGCCAAGGGGCCACGGCCAGCCTGGTGGAGGCCAGATCCTCAAAGGTGACATaGTGCAAGGACAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: LGEPFKRQGATASLVEARSSKVT*CKDRTS
Trigger: AGAGGTTCTGTCCTTGCACAATGTCACCTTTGAGGA...TCTGGCCTCCACCAGGCTGGCCGTGGCCCCTTGGCGCTTGAATGGCTCTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAGKRET*CTVGEP
Trigger: GGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCC...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAGGAACTCCCGGAGATaGCCCTTGGCTGCGTACTCC +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRNSRR*PLAAYS
Trigger: GGAGTACGCAGCCAAGGGCAATCTCCGGGAGTTCCT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCCGTCAGGGCCCACCTaGCTGCCGTTCACTTCCACG +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAPSGPT*LPFTST
Trigger: CGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACGG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCT +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRTSSS*SVVLAP
Trigger: AGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCAGGACACTAGATCCTaGCAGGTGAGCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNQDTRS*QVSCSS
Trigger: AGAGGAACAGCTCACCTGCAAGGATCTAGTGTCCTG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGATPMK*VARQRY
Trigger: GTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGC...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLATPMK*VARQRY
Trigger: GTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGC...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
CDS CCA 90 bp ATAGCTCCCACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTaGCCAGAACAGGACCTTCTCCTGAGGACAGCCGGGCAATCCGGA +
Preference number: 5 (lower is better)
Translates to: IAPTWGQQAAQVQKH*PEQDLLLRTAGQSG
Trigger: TCCGGATTGCCCGGCTGTCCTCAGGAGAAGGTCCTGTTCTGGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCCCTCGGAATTCTTaGCCATTCTTCAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCSPRNS*PFFSQE
Trigger: CTCCTGGCTGAAGAATGGCAAAGAATTCCGAGGGGA...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGAGGTCCGACAGGTCCTaGTCAGTCGCATCATCTTTC +
Preference number: 5 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRSDRS*SVASSF
Trigger: GAAAGATGATGCGACTGACAAGGACCTGTCGGACCT...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGAGGTCCGACAGGTCCTaGTCAGTCGCATCATCTTTC +
Preference number: 5 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGRSDRS*SVASSF
Trigger: GAAAGATGATGCGACTGACAAGGACCTGTCGGACCT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAAGGTCCGACAGGTCCTaGTCAGTCGCATCATCTTTC +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLRSDRS*SVASSF
Trigger: GAAAGATGATGCGACTGACAAGGACCTGTCGGACCT...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTTCCCGGAGATTGCCCTaGGCTGCGTACTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWASRRLP*AAYSTS
Trigger: GCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGGA...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCAGGACACTAGATCCTaGCAGGTGAGCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPQDTRS*QVSCSS
Trigger: AGAGGAACAGCTCACCTGCAAGGATCTAGTGTCCTG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATCCCTCTTTCAACAGCTaGAAAAGCTCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNPSFNS*KSSSTG
Trigger: CCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGGG...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS CCA 90 bp CAAGAGGCTTACCAAGTGTCAGCCGGGTCCTGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCAGAACAG +
Preference number: 5 (lower is better)
Translates to: QEAYQVSAGSWIAPT*GQQAAQVQKHWPEQ
Trigger: CTGTTCTGGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTAAGCCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CCA 90 bp CAAAGCAGCCTTCTCCAAGAGGCTTACCAAGTGTCAGCCGGGTCCTaGATAGCTCCCACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAA +
Preference number: 5 (lower is better)
Translates to: QSSLLQEAYQVSAGS*IAPTWGQQAAQVQK
Trigger: TTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTAAGCCTCTTGGAGAAGGCTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWALDSSH*GSAGSS
Trigger: TGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCAGGTCCGACAGGTCCTaGTCAGTCGCATCATCTTTC +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRSDRS*SVASSF
Trigger: GAAAGATGATGCGACTGACAAGGACCTGTCGGACCT...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCAGGACACTAGATCCTaGCAGGTGAGCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVQDTRS*QVSCSS
Trigger: AGAGGAACAGCTCACCTGCAAGGATCTAGTGTCCTG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCCCCTCTTTCAACAGCTaGAAAAGCTCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPPSFNS*KSSSTG
Trigger: CCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGGG...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCCCTCTTTCAACAGCTaGAAAAGCTCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCPSFNS*KSSSTG
Trigger: CCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGGG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS TCA 90 bp AGGCAGCTCAAGTTCAGAAACATTGGCCAGAACAGGACCTTCTCCTaGGGACAGCCGGGCAATCCGGACAAGGGGTGTGTTGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: RQLKFRNIGQNRTFS*GQPGNPDKGCVGVH
Trigger: ATGAACTCCAACACACCCCTTGTCCGGATTGCCCGGCTGTCCTCAGGAGAAGGTCCTGTTCTGGCCAATGTTTCTGAACTTGAGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCCGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CAGCAGTGCATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: QQCMFPRGLCTQEPRINTRMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...CGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACATGCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGGCTCAGCTTGGGGCACCAAGAAGGCCAAGGCCCACTCTGGACATGGAGTCTACGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: RLSLGHQEGQGPLWTWSLRMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...TAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCTTGGTGCCCCAAGCTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPSPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCCGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVRMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCT +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWARTSSS*SVVLAP
Trigger: AGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp ATGTTCCCAAGGGGCCTCTGCACCCAGGAGCCAAGGATAAACACGCAGGAAGTCTCCTCAAAGGTGACATaGTGCAAGGACAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: MFPRGLCTQEPRINTQEVSSKVT*CKDRTS
Trigger: AGAGGTTCTGTCCTTGCACAATGTCACCTTTGAGGA...GACTTCCTGCGTGTTTATCCTTGGCTCCTGGGTGCAGAGGCCCCTTGGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCTGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPCWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATESPSPS*GDCAGG
Trigger: GCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAAGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCC +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATEGKRET*CTVGEP
Trigger: GGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCC...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACCGTCAGGGCCCACCTaGCTGCCGTTCACTTCCACG +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATEPSGPT*LPFTST
Trigger: CGTGGAAGTGAACGGCAGCAAGGTGGGCCCTGACGG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPLDSSH*GSAGSS
Trigger: TGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATATGATGTTCTTGTGCTaGCCAATCATTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNMMFLC*PIIFII
Trigger: GATGATGAAAATGATTGGCAAGCACAAGAACATCAT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGCCACGGCCAGCCTGGTGGAGGCCAGACGCACGTTCTCAGCAATTCCCTAAATAGGTTAATGATGTTCTaGTGCTTGCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: GHGQPGGGQTHVLSNSLNRLMMF*CLPIIF
Trigger: GAAAATGATTGGCAAGCACAAGAACATCATTAACCT...ATTTAGGGAATTGCTGAGAACGTGCGTCTGGCCTCCACCAGGCTGGCCGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAATGCTGGTGCCGGAGCTaGATGCCCCCAATGCGATGC +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATECWCRS*MPPMRC
Trigger: GCATCGCATTGGGGGCATCAAGCTCCGGCACCAGCA...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTCGGATGCTGCCAAACTaGTTCTCAACTACACAGGTA +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWARMLPN*FSTTQV
Trigger: TACCTGTGTAGTTGAGAACAAGTTTGGCAGCATCCG...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAATGATGTTCTTGTGCTaGCCAATCATTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPMMFLC*PIIFII
Trigger: GATGATGAAAATGATTGGCAAGCACAAGAACATCAT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCTGGCCCTGGCCAGTCAGGAGATTACTCTACAGCAGTGCATGTTCCCAAGGGGATGATGTTCTTGTGCTaGCCAATCATTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: PGPGQSGDYSTAVHVPKGMMFLC*PIIFII
Trigger: GATGATGAAAATGATTGGCAAGCACAAGAACATCAT...CCCCTTGGGAACATGCACTGCTGTAGAGTAATCTCCTGACTGGCCAGGGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGGCCAGAACCCCAGGGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCAGGTTAATGATGTTCTaGTGCTTGCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: GPEPQGCTGWASYILVWCRLMMF*CLPIIF
Trigger: GAAAATGATTGGCAAGCACAAGAACATCATTAACCT...GCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACCCTGGGGTTCTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GGTTGCACAGGGTGGGCCTCTTACATTCTTGTTTGGTGCTCCTGGCCCTGGCCAAGGTTAATGATGTTCTaGTGCTTGCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: GCTGWASYILVWCSWPWPRLMMF*CLPIIF
Trigger: GAAAATGATTGGCAAGCACAAGAACATCATTAACCT...TGGCCAGGGCCAGGAGCACCAAACAAGAATGTAAGAGGCCCACCCTGTGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp AGAAGGCCAAGGCCCACTCTGGACATGGAGTCTAGCCCTCTCCACAATGGTCCCAGGTTAATGATGTTCTaGTGCTTGCCAATCATTTTC +
Preference number: 5 (lower is better)
Translates to: RRPRPTLDMESSPLHNGPRLMMF*CLPIIF
Trigger: GAAAATGATTGGCAAGCACAAGAACATCATTAACCT...GGGACCATTGTGGAGAGGGCTAGACTCCATGTCCAGAGTGGGCCTTGGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAATCCCGGAGATTGCCCTaGGCTGCGTACTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATESRRLP*AAYSTS
Trigger: GCTGGTGGAGTACGCAGCCAAGGGCAATCTCCGGGA...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCT +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPRTSSS*SVVLAP
Trigger: AGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067150.14
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCCCCTCTTTCAACAGCTaGAAAAGCTCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPPSFNS*KSSSTG
Trigger: CCCAGTGGAAGAGCTTTTCAAGCTGTTGAAAGAGGG...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp CCAAGGATAAACACGCAGGAAGTCTTGTCTACTGTTGGCCCATTGCACTGGGCTATGATGTTCTTGTGCTaGCCAATCATTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: PRINTQEVLSTVGPLHWAMMFLC*PIIFII
Trigger: GATGATGAAAATGATTGGCAAGCACAAGAACATCAT...AGCCCAGTGCAATGGGCCAACAGTAGACAAGACTTCCTGCGTGTTTATCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GAAAGTTCCTATATAAATCTAATCCCCCACAAAAGAGGGCCAAAGGCAACAGAACAGGACACTAGATCCTaGCAGGTGAGCTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ESSYINLIPHKRGPKATEQDTRS*QVSCSS
Trigger: AGAGGAACAGCTCACCTGCAAGGATCTAGTGTCCTG...TTCTGTTGCCTTTGGCCCTCTTTTGTGGGGGATTAGATTTATATAGGAACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS-3UTR CAA 90 bp GCTTTACAAATATACAGGTCCAGTACAAACAAAACTGCCGTGCCAGAAAAGCCCATGATGTTCTTGTGCTaGCCAATCATTTTCATCATC +
Preference number: 5 (lower is better)
Translates to: ALQIYRSSTNKTAVPEKPMMFLC*PIIFII
Trigger: GATGATGAAAATGATTGGCAAGCACAAGAACATCAT...GGGCTTTTCTGGCACGGCAGTTTTGTTTGTACTGGACCTGTATATTTGTAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 72 bp CTGCTCCTGCTGGCTAGGTTCAGGCCCTGGAACCTCTaGCGCTCTCCGCACAACTCGCTGCTCTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: LLLLARFRPWNL*RSPHNSLLWTR
Trigger: CCTGGTCCAGAGCAGCGAGTTGTGCGGAGAGCGGCAGAGGTTCCAGGGCCTGAACCTAGCCAGCAGGAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201437.4
ENSMUST00000202138.4
ENSMUST00000202182.2
CDS CCA 72 bp GACCTTGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTaGGGGACTGCGCAGGCGGCAGAGTATCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: DLVHGGRAQALL*GTAQAAEYHSC
Trigger: GCAGCTGTGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
CDS CAA 90 bp TTGGTGGCTCGACAGAGGTACTCGCCCCCGTCCCGCTCCGACACATaGGCCAGGCGGAGGCGTGCGTCTGCCTCCACATTCTCACTGATC +
Preference number: 6 (lower is better)
Translates to: LVARQRYSPPSRSDT*ARRRRASASTFSLI
Trigger: GATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGGGGCGAGTACCTCTGTCGAGCCACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
ENSMUST00000201295.2
CDS GCA 72 bp CCCGTCCCGCTCCGACACATTGGCCAGGCGGAGGCGTaGGTCTGCCTCCACATTCTCACTGATCCAGGACTT +
Preference number: 6 (lower is better)
Translates to: PVPLRHIGQAEA*VCLHILTDPGL
Trigger: AAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGGGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
ENSMUST00000201295.2
CDS GCA 72 bp CCGCTCCGACACATTGGCCAGGCGGAGGCGTGCGTCTaGCTCCACATTCTCACTGATCCAGGACTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PLRHIGQAEACV*LHILTDPGLAA
Trigger: GGCAGCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201295.2
CDS CCA 72 bp TCCGGACGAGCTGGAGCTAGGCGTGTCCTGGCCACCTaGCGAGTACTGCTCAAACGGCACGGAGAGGTCCAA +
Preference number: 6 (lower is better)
Translates to: SGRAGARRVLAT*RVLLKRHGEVQ
Trigger: TTGGACCTCTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAGCTCGTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS CCA 72 bp GAGTCATCTCCGGACGAGCTGGAGCTAGGCGTGTCCTaGCCACCTGGCGAGTACTGCTCAAACGGCACGGAG +
Preference number: 6 (lower is better)
Translates to: ESSPDELELGVS*PPGEYCSNGTE
Trigger: CTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAGCTCGTCCGGAGATGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS CAA 72 bp AGACCTTGTGCACGGTGGGCGAGCCCAAGCCCTTCTTaGGGGGACTGCGCAGGCGGCAGAGTATCACAGCTG +
Preference number: 6 (lower is better)
Translates to: RPCARWASPSPS*GDCAGGRVSQL
Trigger: CAGCTGTGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
CDS CAA 90 bp GATTCCAAGGACACCTGCTGTCGCTTAAGCGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGACTGCGC +
Preference number: 6 (lower is better)
Translates to: DSKDTCCRLSGKRET*CTVGEPKPFFGGLR
Trigger: GCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGCAGGTGTCCTTGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS GCA 72 bp GACACCTGTCGCTTAAGCGGGAAGCGAGAGACCTTGTaGACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: DTCRLSGKRETL*TVGEPKPFFGG
Trigger: TCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 72 bp CTGGAGCTAGGCGTGTCCTGGCCACCTGGCGAGTACTaGTCAAACGGCACGGAGAGGTCCAAGTACTCGTCG +
Preference number: 6 (lower is better)
Translates to: LELGVSWPPGEY*SNGTERSKYSS
Trigger: CGACGAGTACTTGGACCTCTCCGTGCCGTTTGAGCAGTACTCGCCAGGTGGCCAGGACACGCCTAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 72 bp ACCTGCTGTCGCTTAAGCGGGAAGCGAGAGACCTTGTaGACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: TCCRLSGKRETL*TVGEPKPFFGG
Trigger: TCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS CAA 72 bp CGCAGCCAAAAGGCCTTCTCAGCCACGCCTATGAAATaGGTGGCTCGACAGAGGTACTCGCCCCCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: RSQKAFSATPMK*VARQRYSPPSR
Trigger: GCGGGACGGGGGCGAGTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGCTGAGAAGGCCTTTTGGCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
ENSMUST00000201295.2
CDS CAA 72 bp GACACCTGCTGTCGCTTAAGCGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: DTCCRLSGKRET*CTVGEPKPFFG
Trigger: CCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGCAGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS TCA 72 bp CCAGGCGGAGGCGTGCGTCTGCCTCCACATTCTCACTaGTCCAGGACTTGCTGCCGTTCACTTCCACGTGCT +
Preference number: 6 (lower is better)
Translates to: PGGGVRLPPHSH*SRTCCRSLPRA
Trigger: AGCACGTGGAAGTGAACGGCAGCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201295.2
CDS GCA 72 bp CCGCTCCGACACATTGGCCAGGCGGAGGCGTGCGTCTaGCTCCACATTCTCACTGATCCAGGACTTGAGTAC +
Preference number: 6 (lower is better)
Translates to: PLRHIGQAEACV*LHILTDPGLEY
Trigger: GTACTCAAGTCCTGGATCAGTGAGAATGTGGAGGCAGACGCACGCCTCCGCCTGGCCAATGTGTCGGAGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
CDS CAA 72 bp AAGGACACCTGTCGCTTAAGCGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: KDTCRLSGKRET*CTVGEPKPFFG
Trigger: CCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGGTGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS CAA 90 bp TTAGATTCCAAGGACACCTGTCGCTTAAGCGGGAAGCGAGAGACCTaGTGCACGGTGGGCGAGCCCAAGCCCTTCTTTGGGGGACTGCGC +
Preference number: 6 (lower is better)
Translates to: LDSKDTCRLSGKRET*CTVGEPKPFFGGLR
Trigger: GCGCAGTCCCCCAAAGAAGGGCTTGGGCTCGCCCACCGTGCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGGTGTCCTTGGAATCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS GCA 72 bp GTTGCCAGCAGCTGGGCAGCGGAAGCGGACAGTGTTTaGGGCTGGCACAGCCAGCAGTTTCTTATCCATTCG +
Preference number: 6 (lower is better)
Translates to: VASSWAAEADSV*GWHSQQFLIHS
Trigger: CGAATGGATAAGAAACTGCTGGCTGTGCCAGCCGCAAACACTGTCCGCTTCCGCTGCCCAGCTGCTGGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201437.4
ENSMUST00000202138.4
ENSMUST00000202182.2
CDS TCA 72 bp GAACACGCAGCCAAAAGGCCTTCTCAGCCACGCCTATaGAATTGGTGGCTCGACAGAGGTACTCGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: EHAAKRPSQPRL*NWWLDRGTRPR
Trigger: ACGGGGGCGAGTACCTCTGTCGAGCCACCAATTTCATAGGCGTGGCTGAGAAGGCCTTTTGGCTGCGTGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000114411.9
ENSMUST00000171509.9
ENSMUST00000181298.5
ENSMUST00000201295.2
CDS CCA 72 bp CTTCTCCAAGAGGCTTACCAAGTGTCAGCCGGGTCCTaGATAGCTCCCACTTGGGGTCAGCAGGCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: LLQEAYQVSAGS*IAPTWGQQAAQ
Trigger: TTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTAAGCCTCTTGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CAA 90 bp GGACCTTCTCCTGAGGACAGCCGGGCAATCCGGACAAGGGGTGTGTaGGAGTTCATAGAGGAGTTAGATTCCAAGGACACCTGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: GPSPEDSRAIRTRGV*EFIEELDSKDTCCR
Trigger: GCGACAGCAGGTGTCCTTGGAATCTAACTCCTCTATGAACTCCAACACACCCCTTGTCCGGATTGCCCGGCTGTCCTCAGGAGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS CCA 72 bp ACTTGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTaGCCAGAACAGGACCTTCTCCTGAGGACAGCCGGG +
Preference number: 6 (lower is better)
Translates to: TWGQQAAQVQKH*PEQDLLLRTAG
Trigger: CCCGGCTGTCCTCAGGAGAAGGTCCTGTTCTGGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CAA 90 bp CCAAGAGGCTTACCAAGTGTCAGCCGGGTCCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGGCCAGAACA +
Preference number: 6 (lower is better)
Translates to: PRGLPSVSRVLDSSH*GSAGSSSSETLART
Trigger: TGTTCTGGCCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTAAGCCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CCA 72 bp TACCAAGTGTCAGCCGGGTCCTGGATAGCTCCCACTTaGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTGG +
Preference number: 6 (lower is better)
Translates to: YQVSAGSWIAPT*GQQAAQVQKHW
Trigger: CCAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CAA 72 bp CCTGAGGACAGCCGGGCAATCCGGACAAGGGGTGTGTaGGAGTTCATAGAGGAGTTAGATTCCAAGGACACC +
Preference number: 6 (lower is better)
Translates to: PEDSRAIRTRGV*EFIEELDSKDT
Trigger: GGTGTCCTTGGAATCTAACTCCTCTATGAACTCCAACACACCCCTTGTCCGGATTGCCCGGCTGTCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CAA 90 bp GGACCTTCTCCTGAGGACAGCCGGGCAATCCGGACAAGGGGTGTGTaGGAGTTCATAGAGGAGTTAGATTCCAAGGACACCTGTCGCTTA +
Preference number: 6 (lower is better)
Translates to: GPSPEDSRAIRTRGV*EFIEELDSKDTCRL
Trigger: TAAGCGACAGGTGTCCTTGGAATCTAACTCCTCTATGAACTCCAACACACCCCTTGTCCGGATTGCCCGGCTGTCCTCAGGAGAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000202138.4
CDS TCA 72 bp AAGTTCAGAAACATTGGCCAGAACAGGACCTTCTCCTaGGGACAGCCGGGCAATCCGGACAAGGGGTGTGTT +
Preference number: 6 (lower is better)
Translates to: KFRNIGQNRTFS*GQPGNPDKGCV
Trigger: AACACACCCCTTGTCCGGATTGCCCGGCTGTCCTCAGGAGAAGGTCCTGTTCTGGCCAATGTTTCTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS CAA 72 bp TTACCAAGTGTCAGCCGGGTCCTGGATAGCTCCCACTaGGGGTCAGCAGGCAGCTCAAGTTCAGAAACATTG +
Preference number: 6 (lower is better)
Translates to: LPSVSRVLDSSH*GSAGSSSSETL
Trigger: CAATGTTTCTGAACTTGAGCTGCCTGCTGACCCCAAGTGGGAGCTATCCAGGACCCGGCTGACACTTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000114411.9
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000171509.9
ENSMUST00000201295.2
ENSMUST00000202138.4
ENSMUST00000202791.3
CDS GCA 72 bp TTGGAGTTCATAGAGGAGTTAGATTCCAAGGACACCTaGTGTCGCTTAAGCGGGAAGCGAGAGACCTTGTGC +
Preference number: 6 (lower is better)
Translates to: LEFIEELDSKDT*CRLSGKRETLC
Trigger: GCACAAGGTCTCTCGCTTCCCGCTTAAGCGACAGCAGGTGTCCTTGGAATCTAACTCCTCTATGAACTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164207.10
ENSMUST00000201295.2
CDS CAA 72 bp AAGGTGACATTGTGCAAGGACAGAACCTCTAGCTCCTaGTCGGTGGTGTTAGCGCCTGCAGTCTTGAGTACA +
Preference number: 6 (lower is better)
Translates to: KVTLCKDRTSSS*SVVLAPAVLST
Trigger: TGTACTCAAGACTGCAGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCTGTCCTTGCACAATGTCACCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067150.14
ENSMUST00000087820.8
ENSMUST00000164207.10
ENSMUST00000169212.9
ENSMUST00000202138.4