Pregenerated sensors for FGFBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047632Ensembl transcript IDs: ENSMUST00000057337.9, ENSMUST00000238948.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTCCCTGTCCAAGGACATCTCCCGCCTCGGCTGCGCTACCCTCTaGTTCTCAGCACCTACCCCTAGTGCCCCTTGCCAGCCCGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GSLSKDISRLGCATL*FSAPTPSAPCQPAA Trigger: GGCTGCGGGCTGGCAAGGGGCACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR GCA 90 bp | ATTCTCCATCCCGGTTCCCTGTCCAAGGACATCTCCCGCCTCGGCTaGGCTACCCTCTGCTTCTCAGCACCTACCCCTAGTGCCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: ILHPGSLSKDISRLG*ATLCFSAPTPSAPC Trigger: GCAAGGGGCACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAACCGGGATGGAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR-3UTR TCA 90 bp | CCACTTCCTAGGAAAGATTCTCACCTCTTTAGTCACTTCATTCTTGCTAGTCTCAGATTCTTCTTACCCTaGCCCCTGACCCATTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PLPRKDSHLFSHFILASLRFFLP*PLTHFG Trigger: TCCAAAATGGGTCAGGGGTCAGGGTAAGAAGAATCT...GAGACTAGCAAGAATGAAGTGACTAAAGAGGTGAGAATCTTTCCTAGGAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTAGCAAAGGGACTGAAAAGCAATTGTCCTGATAATCCAGTCGTAGATTTAAAAGCCCTCTCCAGCTaGTTCAGATTCTTCTTACCC | + |
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Preference number: 2 (lower is better) Translates to: KVAKGLKSNCPDNPVVDLKALSS*FRFFLP Trigger: GGGTAAGAAGAATCTGAAGCAGCTGGAGAGGGCTTT...TAAATCTACGACTGGATTATCAGGACAATTGCTTTTCAGTCCCTTTGCTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAAAACCAAGAAGATCTTGAAATATTCAACATGGTTCAGGTTCTTACTCACAAAGCCCTCTCCAGCTaGTTCAGATTCTTCTTACCC | + |
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Preference number: 2 (lower is better) Translates to: VENQEDLEIFNMVQVLTHKALSS*FRFFLP Trigger: GGGTAAGAAGAATCTGAAGCAGCTGGAGAGGGCTTT...GTGAGTAAGAACCTGAACCATGTTGAATATTTCAAGATCTTCTTGGTTTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR GCA 72 bp | TCCAAGGACATCTCCCGCCTCGGCTGCGCTACCCTCTaGTTCTCAGCACCTACCCCTAGTGCCCCTTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SKDISRLGCATL*FSAPTPSAPCQ Trigger: CTGGCAAGGGGCACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR GCA 72 bp | CCCGGTTCCCTGTCCAAGGACATCTCCCGCCTCGGCTaGGCTACCCTCTGCTTCTCAGCACCTACCCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: PGSLSKDISRLG*ATLCFSAPTPS Trigger: ACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAACCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| 3UTR TCA 72 bp | AAAGCCCTCTCCAGCTGCTTCAGATTCTTCTTACCCTaGCCCCTGACCCATTTTGGAATCCCGACTAGCCGA | + |
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Preference number: 3 (lower is better) Translates to: KALSSCFRFFLP*PLTHFGIPTSR Trigger: TCGGCTAGTCGGGATTCCAAAATGGGTCAGGGGTCAGGGTAAGAAGAATCTGAAGCAGCTGGAGAGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTGTCCAAGGACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCGCCCCGCCCGGGGTCTaGCAGCGCAAGGCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPVQGHLPPRLRYPLLLSAPPGV*QRKASS Trigger: AGAGCTGGCCTTGCGCTGCCAGACCCCGGGCGGGGC...GCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR TCA 90 bp | CGACTAGCTTATTCTCCATCCCGGTTCCCTGTCCAAGGACATCTCCCGCCTCGGGCGGGTAGGCTGGGGTaGGCGGGCGAGTGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RLAYSPSRFPVQGHLPPRAGRLG*AGECRS Trigger: AGACCTGCACTCGCCCGCTCACCCCAGCCTACCCGC...CCGAGGCGGGAGATGTCCTTGGACAGGGAACCGGGATGGAGAATAAGCTAGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTCCAAGGACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCGCGGGTACCAAGAGCTaGCAGCTGCACGCGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPVQGHLPPRLRYPLLLSAGTKS*QLHACC Trigger: GCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGC...GCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | GACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCACCTACCCCTAGTCCAAGAGCTGCCAGCTaGACGCGTGCTGCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: DISRLGCATLCFSAPTPSPRAAS*TRAALD Trigger: GTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGG...ACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR CCA 90 bp | ACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCACCTACCCCTAGTGGCACGCGTGCTGCTCTaGACTCACGAAGCGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: TSPASAALPSASQHLPLVARVLL*THEATG Trigger: TCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGC...CACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTCCAAGGACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCCAGCTGCACGCGTGCTaGTCTGGACTCACGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: FPVQGHLPPRLRYPLLLSQLHAC*SGLTKR Trigger: TCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTG...GCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTCCTTGGACAGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | CCACTTCCTAGGAAAGATTCTCACCTCTTTAGTCACTTCATTCTTGCTAGTCTCGCGGGTACCAAGAGCTaGCAGCTGCACGCGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLPRKDSHLFSHFILASLAGTKS*QLHACC Trigger: GCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGC...GAGACTAGCAAGAATGAAGTGACTAAAGAGGTGAGAATCTTTCCTAGGAAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR CCA 90 bp | GTTGAAAACCAAGAAGATCTTGAAATATTCAACATGGTTCAGGTTCTTACTCACGCCCCGCCCGGGGTCTaGCAGCGCAAGGCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VENQEDLEIFNMVQVLTHAPPGV*QRKASS Trigger: AGAGCTGGCCTTGCGCTGCCAGACCCCGGGCGGGGC...GTGAGTAAGAACCTGAACCATGTTGAATATTTCAAGATCTTCTTGGTTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR TCA 90 bp | ATTTTAAATTTAATCACAGAAGAGATGAAGGGCCAAATGACCCAGATACGTGTTGCGGGTAGGCTGGGGTaGGCGGGCGAGTGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ILNLITEEMKGQMTQIRVAGRLG*AGECRS Trigger: AGACCTGCACTCGCCCGCTCACCCCAGCCTACCCGC...AACACGTATCTGGGTCATTTGGCCCTTCATCTCTTCTGTGATTAAATTTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | AAAGTAGCAAAGGGACTGAAAAGCAATTGTCCTGATAATCCAGTCGTAGATTTAGGTCACTTCCCTGCCTaGTGCCCCCTTGTCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KVAKGLKSNCPDNPVVDLGHFPA*CPLVPP Trigger: GGGAGGGACAAGGGGGCAGCAGGCAGGGAAGTGACC...TAAATCTACGACTGGATTATCAGGACAATTGCTTTTCAGTCCCTTTGCTACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | ATTTTAAATTTAATCACAGAAGAGATGAAGGGCCAAATGACCCAGATACGTGTTGGTCACTTCCCTGCCTaGTGCCCCCTTGTCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILNLITEEMKGQMTQIRVGHFPA*CPLVPP Trigger: GGGAGGGACAAGGGGGCAGCAGGCAGGGAAGTGACC...AACACGTATCTGGGTCATTTGGCCCTTCATCTCTTCTGTGATTAAATTTAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | AAAGTAGCAAAGGGACTGAAAAGCAATTGTCCTGATAATCCAGTCGTAGATTTACCAAGAGCTGCCAGCTaGACGCGTGCTGCTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: KVAKGLKSNCPDNPVVDLPRAAS*TRAALD Trigger: GTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGG...TAAATCTACGACTGGATTATCAGGACAATTGCTTTTCAGTCCCTTTGCTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | GTTGAAAACCAAGAAGATCTTGAAATATTCAACATGGTTCAGGTTCTTACTCACCAGCTGCACGCGTGCTaGTCTGGACTCACGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VENQEDLEIFNMVQVLTHQLHAC*SGLTKR Trigger: TCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTG...GTGAGTAAGAACCTGAACCATGTTGAATATTTCAAGATCTTCTTGGTTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR GCA 90 bp | GTTGAAAACCAAGAAGATCTTGAAATATTCAACATGGTTCAGGTTCTTACTCACTGCCAGCTGCACGCGTaGTGCTCTGGACTCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: VENQEDLEIFNMVQVLTHCQLHA*CSGLTK Trigger: CTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCA...GTGAGTAAGAACCTGAACCATGTTGAATATTTCAAGATCTTCTTGGTTTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GGCGTGGCGGCAGCGGCGCGGGGTCCAGGCAGGGCCGTGGTCTCCTaGGCAGCGCGCCCAGCAGCCGTCTCCAGTAGTGCGCGCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: GVAAAARGPGRAVVS*AARPAAVSSSARAG Trigger: CCCGGCGCGCGCACTACTGGAGACGGCTGCTGGGCGCGCTGCGCAGGAGACCACGGCCCTGCCTGGACCCCGCGCCGCTGCCGCCACGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 90 bp | GCGCGCCCAGCAGCCGTCTCCAGTAGTGCGCGCGCCGGGCGCCGGTaGCCGCGCAGCGCTCCGGATGCCCGCGGTAGGCGCAATGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: ARPAAVSSSARAGRR*PRSAPDARGRRNAD Trigger: GTCTGCATTGCGCCTACCGCGGGCATCCGGAGCGCTGCGCGGCCACCGGCGCCCGGCGCGCGCACTACTGGAGACGGCTGCTGGGCGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 90 bp | TCCGCGCCCTGGACCGGGGCGGCTCGCTGGGACGCGCGGGTAGGCTaGGGTGAGCGGGCGAGTGCAGGTCTGAGCCAGCCGTCTTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SAPWTGAARWDARVG*GERASAGLSQPSCG Trigger: CCCGCAAGACGGCTGGCTCAGACCTGCACTCGCCCGCTCACCCCAGCCTACCCGCGCGTCCCAGCGAGCCGCCCCGGTCCAGGGCGCGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GGAGCCGACCGTGGGTCGGGAGGCCCGGGTCACTTCCCTGCCTGCTaGCCCCTTGTCCCTCCCGGCAGCCGAGAGGAGGCAGCCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GADRGSGGPGHFPAC*PLVPPGSREEAASQ Trigger: CTGGGAGGCTGCCTCCTCTCGGCTGCCGGGAGGGACAAGGGGGCAGCAGGCAGGGAAGTGACCCGGGCCTCCCGACCCACGGTCGGCTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GACCGGAGGAGCCGACCGTGGGTCGGGAGGCCCGGGTCACTTCCCTaGCTGCTGCCCCCTTGTCCCTCCCGGCAGCCGAGAGGAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: DRRSRPWVGRPGSLP*LLPPCPSRQPRGGS Trigger: GCTGCCTCCTCTCGGCTGCCGGGAGGGACAAGGGGGCAGCAGGCAGGGAAGTGACCCGGGCCTCCCGACCCACGGTCGGCTCCTCCGGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GGCGTCCCCGGGGCGGGTACCAAGAGCTGCCAGCTGCACGCGTGCTaGTCTGGACTCACGAAGCGACCGGAGGAGCCGACCGTGGGTCGG | + |
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Preference number: 5 (lower is better) Translates to: GVPGAGTKSCQLHAC*SGLTKRPEEPTVGR Trigger: CCGACCCACGGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 90 bp | CCCCGGGGCGGGTACCAAGAGCTGCCAGCTGCACGCGTGCTGCTCTaGACTCACGAAGCGACCGGAGGAGCCGACCGTGGGTCGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PRGGYQELPAARVLL*THEATGGADRGSGG Trigger: GCCTCCCGACCCACGGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GTCGGCGTCCCCGGGGCGGGTACCAAGAGCTGCCAGCTGCACGCGTaGTGCTCTGGACTCACGAAGCGACCGGAGGAGCCGACCGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VGVPGAGTKSCQLHA*CSGLTKRPEEPTVG Trigger: ACCCACGGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | CTCCGCCAGTCGGCGTCCCCGGGGCGGGTACCAAGAGCTGCCAGCTaGACGCGTGCTGCTCTGGACTCACGAAGCGACCGGAGGAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: LRQSASPGRVPRAAS*TRAALDSRSDRRSR Trigger: TCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCCGACTGGCGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 90 bp | GCCAGCTCTCCGCCAGTCGGCGTCCCCGGGGCGGGTACCAAGAGCTaGCAGCTGCACGCGTGCTGCTCTGGACTCACGAAGCGACCGGAG | + |
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Preference number: 5 (lower is better) Translates to: ASSPPVGVPGAGTKS*QLHACCSGLTKRPE Trigger: CTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCCGACTGGCGGAGAGCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR CAA 90 bp | GACATCTCCCGCCTCGGCTGCGCTACCCTCTGCTTCTCAGCACCTACCCCTAGTCTGCCTGCTGCCCCCTaGTCCCTCCCGGCAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: DISRLGCATLCFSAPTPSLPAAP*SLPAAE Trigger: CTCGGCTGCCGGGAGGGACAAGGGGGCAGCAGGCAG...ACTAGGGGTAGGTGCTGAGAAGCAGAGGGTAGCGCAGCCGAGGCGGGAGATGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS TCA 90 bp | AGAAGTTGCAAAGGGAATGCCACTTCTCGGTGCAGTAGGTCTCAGTaGGCTCGGCATTCTGGTCCAGCCCATTGGGTTGGAATCCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RSCKGNATSRCSRSQ*ARHSGPAHWVGIRP Trigger: CGGCCGGATTCCAACCCAATGGGCTGGACCAGAATGCCGAGCTCACTGAGACCTACTGCACCGAGAAGTGGCATTCCCTTTGCAACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS-3UTR CAA 90 bp | AAAGTAGCAAAGGGACTGAAAAGCAATTGTCCTGATAATCCAGTCGTAGATTTACTGCCTGCTGCCCCCTaGTCCCTCCCGGCAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: KVAKGLKSNCPDNPVVDLLPAAP*SLPAAE Trigger: CTCGGCTGCCGGGAGGGACAAGGGGGCAGCAGGCAG...TAAATCTACGACTGGATTATCAGGACAATTGCTTTTCAGTCCCTTTGCTACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 72 bp | GGTGAGCGGGCGAGTGCAGGTCTGAGCCAGCCGTCTTaGGGGCGCACAGGCGTGGCGGCAGCGGCGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GERASAGLSQPS*GRTGVAAAARG Trigger: ACCCCGCGCCGCTGCCGCCACGCCTGTGCGCCCGCAAGACGGCTGGCTCAGACCTGCACTCGCCCGCTCACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 72 bp | TCGGCGTCCCCGGGGCGGGTACCAAGAGCTGCCAGCTaGACGCGTGCTGCTCTGGACTCACGAAGCGACCGG | + |
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Preference number: 6 (lower is better) Translates to: SASPGRVPRAAS*TRAALDSRSDR Trigger: CCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 72 bp | CCGCCAGTCGGCGTCCCCGGGGCGGGTACCAAGAGCTaGCAGCTGCACGCGTGCTGCTCTGGACTCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPVGVPGAGTKS*QLHACCSGLTK Trigger: CTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCCGGGGACGCCGACTGGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 72 bp | GCTCTGGACTCACGAAGCGACCGGAGGAGCCGACCGTaGGTCGGGAGGCCCGGGTCACTTCCCTGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALDSRSDRRSRP*VGRPGSLPCLL Trigger: CAGCAGGCAGGGAAGTGACCCGGGCCTCCCGACCCACGGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS GCA 72 bp | GGGGCGGGTACCAAGAGCTGCCAGCTGCACGCGTGCTaGTCTGGACTCACGAAGCGACCGGAGGAGCCGACC | + |
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Preference number: 6 (lower is better) Translates to: GAGTKSCQLHAC*SGLTKRPEEPT Trigger: GGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCCGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 72 bp | GGGTACCAAGAGCTGCCAGCTGCACGCGTGCTGCTCTaGACTCACGAAGCGACCGGAGGAGCCGACCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GYQELPAARVLL*THEATGGADRG Trigger: CCCACGGTCGGCTCCTCCGGTCGCTTCGTGAGTCCAGAGCAGCACGCGTGCAGCTGGCAGCTCTTGGTACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS CCA 72 bp | GAGTTGGACTTCACTAGCAAGGGCTTCTTTTCCGGCTaGGAGCTTGGGGACCGCACCGACTGTCGCGACCGA | + |
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Preference number: 6 (lower is better) Translates to: ELDFTSKGFFSG*ELGDRTDCRDR Trigger: TCGGTCGCGACAGTCGGTGCGGTCCCCAAGCTCCCAGCCGGAAAAGAAGCCCTTGCTAGTGAAGTCCAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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| CDS TCA 72 bp | AAAGGGAATGCCACTTCTCGGTGCAGTAGGTCTCAGTaGGCTCGGCATTCTGGTCCAGCCCATTGGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KGNATSRCSRSQ*ARHSGPAHWVG Trigger: TCCAACCCAATGGGCTGGACCAGAATGCCGAGCTCACTGAGACCTACTGCACCGAGAAGTGGCATTCCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057337.9 ENSMUST00000238948.2 |
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