Pregenerated sensors for FGFBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048373Ensembl transcript IDs: ENSMUST00000061299.9, ENSMUST00000199481.2, ENSMUST00000199894.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTACTTATATGCACCTAGGTTTGTGGTCCATGGAAGAATACGCTaGGGTAAAGCGTCCCTGAAAAGCATATCCAAGGATGTGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: HYLYAPRFVVHGRIR*GKASLKSISKDVEK Trigger: TTTTTCCACATCCTTGGATATGCTTTTCAGGGACGCTTTACCTCAGCGTATTCTTCCATGGACCACAAACCTAGGTGCATATAAGTAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| 3UTR TCA 72 bp | TATGCACCTAGGTTTGTGGTCCATGGAAGAATACGCTaGGGTAAAGCGTCCCTGAAAAGCATATCCAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: YAPRFVVHGRIR*GKASLKSISKD Trigger: ATCCTTGGATATGCTTTTCAGGGACGCTTTACCTCAGCGTATTCTTCCATGGACCACAAACCTAGGTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| 3UTR TCA 72 bp | GCCAACAATTCCTTGCTTGCATATTATCACATGCATTaGTCCACTACTTATATGCACCTAGGTTTGTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: ANNSLLAYYHMH*STTYMHLGLWS Trigger: GGACCACAAACCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | ATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGACAGTGGGGACTGGACCTTCAGGCTaGTGCCCTGCTCCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ILEMYLVGNSGSFQQTVGTGPSG*CPAPPQ Trigger: CTGAGGAGGAGCAGGGCATCAGCCTGAAGGTCCAGT...CCCCACTGTCTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | CCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGACAGTGTTTTCTGAGAACGCCTaGGTAGCCAGGAGAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: PILEMYLVGNSGSFQQTVFSENA*VARRRK Trigger: CTTCCTTCTCCTGGCTACTCAGGCGTTCTCAGAAAA...CACTGTCTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATAACTGGACCTTCAGGCTaGTGCCCTGCTCCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: CPELYYPGKYSQQFLACITGPSG*CPAPPQ Trigger: CTGAGGAGGAGCAGGGCATCAGCCTGAAGGTCCAGT...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGTTCAGGCTGATGCCCTaGTCCTCCTCAGTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: FLACILSHALIHYLYAPRFRLMP*SSSVTA Trigger: GGCTGTGACTGAGGAGGAGCAGGGCATCAGCCTGAA...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACCTTGCGGAGACCTCTaGTTTCTCCTTCCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPAPCGDL*FLLPGL Trigger: AAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGG...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGCTTGTTGTGCTCCCTTaGGGAGACCTCTGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVPILEMYLVGNSGSFQQLVVLP*GDLCFL Trigger: GAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAG...CTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCAACTGGACCTTCAGGCTaGTGCCCTGCTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQFLACILSHALIHYLYATGPSG*CPAPPQ Trigger: CTGAGGAGGAGCAGGGCATCAGCCTGAAGGTCCAGT...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACGCTGTGCTGTGTGGTaGGTTCTTGGCTCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPARCAVW*VLGSLS Trigger: AGAAAGAGAGCCAAGAACGCACCACACAGCACAGCG...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGCCTTGCGGAGACCTCTaGTTTCTCCTTCCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLACILSHALIHYLYAPRPCGDL*FLLPGL Trigger: AAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGG...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | TTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGCTTCTCTGCTTATTCTaGGCCTTCCCTAACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FVPILEMYLVGNSGSFQQLLCLF*AFPNEG Trigger: TCCCTCGTTAGGGAAGGCCCAGAATAAGCAGAGAAG...CTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCTGCTTTCTCCTTCCTaGGCTTCGTGTTTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: HFVPILEMYLVGNSGSFQLLSPS*ASCFHV Trigger: CACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAG...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGTCTTGGCTCTCTTTCTaGCCTTTTCTGAGAACGCCT | + |
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Preference number: 4 (lower is better) Translates to: FVPILEMYLVGNSGSFQQSWLSF*PFLRTP Trigger: AGGCGTTCTCAGAAAAGGTCAGAAAGAGAGCCAAGA...CTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGTGGCTTGGTCTTTGGTaGCAAACTTGCCATGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFVPILEMYLVGNSGSFQWLGLW*QTCHAS Trigger: TGACGCATGGCAAGTTTGTCACCAAAGACCAAGCCA...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTCAGGCTGATGCCCTaGTCCTCCTCAGTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHAFRLMP*SSSVTA Trigger: GGCTGTGACTGAGGAGGAGCAGGGCATCAGCCTGAA...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCATTCAGGCTGATGCCCTaGTCCTCCTCAGTCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: QQFLACILSHALIHYLYAFRLMP*SSSVTA Trigger: GGCTGTGACTGAGGAGGAGCAGGGCATCAGCCTGAA...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCTTCGTGTTTCCACGTaGGTTGGGGTTCACCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PGKYSQQFLACILSHALILRVST*VGVHQL Trigger: AAGCTGGTGAACCCCAACGCACGTGGAAACACGAAG...GATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATACTTCGTGTTTCCACGTaGGTTGGGGTTCACCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: CPELYYPGKYSQQFLACILRVST*VGVHQL Trigger: AAGCTGGTGAACCCCAACGCACGTGGAAACACGAAG...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCTTGTTGTGCTCCCTTaGGGAGACCTCTGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PGKYSQQFLACILSHALILVVLP*GDLCFL Trigger: GAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAG...GATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | ATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGACAGTGGGGCTTGAGGTTAGACTCTaGAAATCTCTTTCTGCACAC | + |
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Preference number: 4 (lower is better) Translates to: ILEMYLVGNSGSFQQTVGLEVRL*KSLSAH Trigger: GTGTGCAGAAAGAGATTTCCAGAGTCTAACCTCAAG...CCCCACTGTCTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATACTGCTTTCTCCTTCCTaGGCTTCGTGTTTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: CPELYYPGKYSQQFLACILLSPS*ASCFHV Trigger: CACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAG...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGGTGGAGACAGCTTCTTaGACCTTGTTGTGCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: HFVPILEMYLVGNSGSFQVETAS*TLLCSL Trigger: AAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCAC...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TCATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCATTTTCTGAGAACGCCTaGGTAGCCAGGAGAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SFCSHIRNVSCGELGKFPFSENA*VARRRK Trigger: CTTCCTTCTCCTGGCTACTCAGGCGTTCTCAGAAAA...TGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGTGGCTTGGTCTTTGGTaGCAAACTTGCCATGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: FLACILSHALIHYLYAPRWLGLW*QTCHAS Trigger: TGACGCATGGCAAGTTTGTCACCAAAGACCAAGCCA...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCACCTTGCGGAGACCTCTaGTTTCTCCTTCCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHAPCGDL*FLLPGL Trigger: AAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGG...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATACTTCTCTGCTTATTCTaGGCCTTCCCTAACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CPELYYPGKYSQQFLACILLCLF*AFPNEG Trigger: TCCCTCGTTAGGGAAGGCCCAGAATAAGCAGAGAAG...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGGTGGAGACAGCTTCTTaGACCTTGTTGTGCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLACILSHALIHYLYAPRVETAS*TLLCSL Trigger: AAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCAC...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | ATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTTTTTCTGAGAACGCCTaGGTAGCCAGGAGAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IQPTIPCLHIITCIDPLLFSENA*VARRRK Trigger: CTTCCTTCTCCTGGCTACTCAGGCGTTCTCAGAAAA...AAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCATCGCCTGTAACATGTTaGGGAAGAATGTGCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPASPVTC*GRMCKW Trigger: CCATTTGCACATTCTTCCTCAACATGTTACAGGCGA...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCACGCTGTGCTGTGTGGTaGGTTCTTGGCTCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHARCAVW*VLGSLS Trigger: AGAAAGAGAGCCAAGAACGCACCACACAGCACAGCG...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCAGATATTTTTCTGTTTaGGCAGCGTGCGGGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: PGKYSQQFLACILSHALIRYFSV*AACGQP Trigger: AGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCT...GATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCACTTGTTGTGCTCCCTTaGGGAGACCTCTGCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHALVVLP*GDLCFL Trigger: GAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAG...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | ATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTCTTCTCTGCTTATTCTaGGCCTTCCCTAACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: IQPTIPCLHIITCIDPLLLLCLF*AFPNEG Trigger: TCCCTCGTTAGGGAAGGCCCAGAATAAGCAGAGAAG...AAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACTGCTTTCTCCTTCCTaGGCTTCGTGTTTCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: QQFLACILSHALIHYLYALLSPS*ASCFHV Trigger: CACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAG...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATGGCTTGGTCTTTGGTaGCAAACTTGCCATGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHAWLGLW*QTCHAS Trigger: TGACGCATGGCAAGTTTGTCACCAAAGACCAAGCCA...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TCATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCATCGCCTGTAACATGTTaGGGAAGAATGTGCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: SFCSHIRNVSCGELGKFPSPVTC*GRMCKW Trigger: CCATTTGCACATTCTTCCTCAACATGTTACAGGCGA...TGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR TCA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATCGCCTGTAACATGTTaGGGAAGAATGTGCAAATGG | + |
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Preference number: 4 (lower is better) Translates to: CPELYYPGKYSQQFLACISPVTC*GRMCKW Trigger: CCATTTGCACATTCTTCCTCAACATGTTACAGGCGA...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACTCTTGGCGTTCCTaGAGATATTTTTCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HFVPILEMYLVGNSGSFQHSWRS*RYFSVC Trigger: GCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTG...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACACTCTTGGCGTTCCTaGAGATATTTTTCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPAHSWRS*RYFSVC Trigger: GCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTG...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS-3UTR CCA 90 bp | TTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGTCTTCAAGACACTCTTaGCGTTCCTGCAGATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVPILEMYLVGNSGSFQQSSRHS*RSCRYF Trigger: AAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGA...CTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACTTGAGGTTAGACTCTaGAAATCTCTTTCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPALEVRL*KSLSAH Trigger: GTGTGCAGAAAGAGATTTCCAGAGTCTAACCTCAAG...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCAGTGGAGACAGCTTCTTaGACCTTGTTGTGCTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHAVETAS*TLLCSL Trigger: AAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCAC...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR TCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATCTTGGCTCTCTTTCTaGCCTTTTCTGAGAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHASWLSF*PFLRTP Trigger: AGGCGTTCTCAGAAAAGGTCAGAAAGAGAGCCAAGA...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR GCA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCAAGATATTTTTCTGTTTaGGCAGCGTGCGGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YYPGKYSQQFLACILSHARYFSV*AACGQP Trigger: AGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCT...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR GCA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCAAGATATTTTTCTGTTTaGGCAGCGTGCGGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QQFLACILSHALIHYLYARYFSV*AACGQP Trigger: AGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCT...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCATCTTCAAGACACTCTTaGCGTTCCTGCAGATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSHIRNVSCGELGKFPASSRHS*RSCRYF Trigger: AAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGA...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| 3UTR CAA 72 bp | AGCCAACAATTCCTTGCTTGCATATTATCACATGCATaGATCCACTACTTATATGCACCTAGGTTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQQFLACILSHA*IHYLYAPRFVV Trigger: GACCACAAACCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR GCA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACACTCTTGGCGTTCCTaGAGATATTTTTCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQFLACILSHALIHYLYAHSWRS*RYFSVC Trigger: GCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTG...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 90 bp | GGAGACAGCTTCTTGGACCTTGTTGTGCTCCCTTGCGGAGACCTCTaGTTTCTCCTTCCTGGGCTTCGTGTTTCCACGTGCGTTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GDSFLDLVVLPCGDL*FLLPGLRVSTCVGV Trigger: AACCCCAACGCACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 90 bp | GTTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTTGTGCTCCCTTaGGGAGACCTCTGCTTTCTCCTTCCTGGGCTTCGTGTTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VWLRGDSFLDLVVLP*GDLCFLLPGLRVST Trigger: CGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 90 bp | TTGACCCTGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTTGTaGTCCCTTGCGGAGACCTCTGCTTTCTCCTTCCTGGGCTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTLFGSVETASWTLL*SLAETSAFSFLGFV Trigger: CACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAGGGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CCA 90 bp | TTGCCATGCGTCAGAGATTTAGATGTCCTGCTTCTCTGCTTATTCTaGGCCTTCCCTAACGAGGGAGCTGAACCCTCTACCCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPCVRDLDVLLLCLF*AFPNEGAEPSTPSS Trigger: GGAGGAGGGGGTAGAGGGTTCAGCTCCCTCGTTAGGGAAGGCCCAGAATAAGCAGAGAAGCAGGACATCTAAATCTCTGACGCATGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 90 bp | ATCTCTTTCTGCACACTCTGGTCTTCAAGACACTCTTGGCGTTCCTaGAGATATTTTTCTGTTTGCGCAGCGTGCGGGCAACCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISFCTLWSSRHSWRS*RYFSVCAACGQPVS Trigger: GGAAACAGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGACCAGAGTGTGCAGAAAGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 90 bp | TGGTCTTCAAGACACTCTTGGCGTTCCTGCAGATATTTTTCTGTTTaGGCAGCGTGCGGGCAACCTGTTTCCAGTAGATCTGGTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSSRHSWRSCRYFSV*AACGQPVSSRSGLC Trigger: ACAAAGACCAGATCTACTGGAAACAGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CCA 90 bp | ACATCTGGATCCTCTAGACACTCTGGATCTCTAATGGCCATGGTCTaGGTCGCAGCTGGATTGAGTGTGATGTCTTCTTTGACCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSGSSRHSGSLMAMV*VAAGLSVMSSLTLF Trigger: AAACAGGGTCAAAGAAGACATCACACTCAATCCAGCTGCGACCCAGACCATGGCCATTAGAGATCCAGAGTGTCTAGAGGATCCAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGCTTCTTGGACCTTGTaGTGCTCCCTTGCGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: FCSHIRNVSCGELGKFPAASWTL*CSLAET Trigger: GGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGC...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGAACTTTATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATAGCTTCTTGGACCTTGTaGTGCTCCCTTGCGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CPELYYPGKYSQQFLACIASWTL*CSLAET Trigger: GGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGC...TATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATAAAGTTCTGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGATATTTTTCTGTTaGCGCAGCGTGCGGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HFVPILEMYLVGNSGSFQQIFFC*RSVRAT Trigger: GGTTGCCCGCACGCTGCGCAAACAGAAAAATATCTG...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | CCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGACAGTGGTCTTCAAGACACTCTaGGCGTTCCTGCAGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: PILEMYLVGNSGSFQQTVVFKTL*AFLQIF Trigger: AAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGAC...CACTGTCTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | ATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTGCTTCTTGGACCTTGTaGTGCTCCCTTGCGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: IQPTIPCLHIITCIDPLLASWTL*CSLAET Trigger: GGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGC...AAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCAGTGGGTCGCAGCTGGATaGAGTGTGATGTCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FVPILEMYLVGNSGSFQQWVAAG*SVMSSL Trigger: CAAAGAAGACATCACACTCAATCCAGCTGCGACCCA...CTGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGGCGGTCTTCCTCTGGTaGAGCACATCTGGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLACILSHALIHYLYAPRAVFLW*STSGSS Trigger: AGAGGATCCAGATGTGCTCAACCAGAGGAAGACCGC...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCATTGATCGCGGTCTTCCTCTGGTaGAGCACATCTGGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGKYSQQFLACILSHALIAVFLW*STSGSS Trigger: AGAGGATCCAGATGTGCTCAACCAGAGGAAGACCGC...GATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TCATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCGGTCTTCCTCTGGTaGAGCACATCTGGATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFCSHIRNVSCGELGKFPAVFLW*STSGSS Trigger: AGAGGATCCAGATGTGCTCAACCAGAGGAAGACCGC...TGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGCACATGTGGCTTGGTCTTaGGTGACAAACTTGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FCSHIRNVSCGELGKFPAHVAWS*VTNLPC Trigger: GCATGGCAAGTTTGTCACCAAAGACCAAGCCACATG...TGCTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGCAGATATTTTTCTGTTaGCGCAGCGTGCGGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: FLACILSHALIHYLYAPRQIFFC*RSVRAT Trigger: GGTTGCCCGCACGCTGCGCAAACAGAAAAATATCTG...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | CATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCAGTGGGTCGCAGCTGGATaGAGTGTGATGTCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFVPILEMYLVGNSGSFQWVAAG*SVMSSL Trigger: CAAAGAAGACATCACACTCAATCCAGCTGCGACCCA...CTGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGCATGTGGCTTGGTCTTaGGTGACAAACTTGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FLACILSHALIHYLYAPRHVAWS*VTNLPC Trigger: GCATGGCAAGTTTGTCACCAAAGACCAAGCCACATG...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TCATTTTGTTCCCATATTAGAAATGTATCTTGTGGGGAACTCGGGAAGTTTCCACATGTGGCTTGGTCTTaGGTGACAAACTTGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SFCSHIRNVSCGELGKFPHVAWS*VTNLPC Trigger: GCATGGCAAGTTTGTCACCAAAGACCAAGCCACATG...TGGAAACTTCCCGAGTTCCCCACAAGATACATTTCTAATATGGGAACAAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCACCTAGGTGGGTCGCAGCTGGATaGAGTGTGATGTCTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLACILSHALIHYLYAPRWVAAG*SVMSSL Trigger: CAAAGAAGACATCACACTCAATCCAGCTGCGACCCA...CCTAGGTGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | TATTATCCTGGTAAATACAGCCAACAATTCCTTGCTTGCATATTATCACATGCAGTCTTCAAGACACTCTaGGCGTTCCTGCAGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: YYPGKYSQQFLACILSHAVFKTL*AFLQIF Trigger: AAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGAC...TGCATGTGATAATATGCAAGCAAGGAATTGTTGGCTGTATTTACCAGGATAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS-3UTR CAA 90 bp | CAACAATTCCTTGCTTGCATATTATCACATGCATTGATCCACTACTTATATGCAGTCTTCAAGACACTCTaGGCGTTCCTGCAGATATTT | + |
|
Preference number: 5 (lower is better) Translates to: QQFLACILSHALIHYLYAVFKTL*AFLQIF Trigger: AAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGAC...TGCATATAAGTAGTGGATCAATGCATGTGATAATATGCAAGCAAGGAATTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 72 bp | CCGTGGAGACAGCTTCTTGGACCTTGTTGTGCTCCCTaGCGGAGACCTCTGCTTTCTCCTTCCTGGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PWRQLLGPCCAP*RRPLLSPSWAS Trigger: CGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 72 bp | ACCCTGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTaGTTGTGCTCCCTTGCGGAGACCTCTGCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLFGSVETASWT*LCSLAETSAFS Trigger: GGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 90 bp | TGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTTGTGCTCCCTaGCGGAGACCTCTGCTTTCTCCTTCCTGGGCTTCGTGTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLAPWRQLLGPCCAP*RRPLLSPSWASCFH Trigger: GTGGAAACACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 90 bp | TCTTTGACCCTGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTaGTGCTCCCTTGCGGAGACCTCTGCTTTCTCCTTCCTGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLTLFGSVETASWTL*CSLAETSAFSFLGF Trigger: GAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAGGGTCAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 90 bp | TCTTCTTTGACCCTGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTaGTTGTGCTCCCTTGCGGAGACCTCTGCTTTCTCCTTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTLFGSVETASWT*LCSLAETSAFSFLG Trigger: GCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAGGGTCAAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 72 bp | TTCTTGGACCTTGTTGTGCTCCCTTGCGGAGACCTCTaGTTTCTCCTTCCTGGGCTTCGTGTTTCCACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLDLVVLPCGDL*FLLPGLRVSTC Trigger: GCACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS GCA 72 bp | TTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTTGTaGTCCCTTGCGGAGACCTCTGCTTTCTCCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FGSVETASWTLL*SLAETSAFSFL Trigger: CAGGAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 72 bp | CTGTTTGGCTCCGTGGAGACAGCTTCTTGGACCTTGTaGTGCTCCCTTGCGGAGACCTCTGCTTTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFGSVETASWTL*CSLAETSAFSF Trigger: GAAGGAGAAAGCAGAGGTCTCCGCAAGGGAGCACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
||
| CDS CAA 90 bp | GTCAGTTGGGTCACCAGCAAAAACACAAGAAAACTCCTGATCGGCTaGTGTGCACTGGACCTTCAGGCTGATGCCCTGCTCCTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: VSWVTSKNTRKLLIG*CALDLQADALLLLS Trigger: ACTGAGGAGGAGCAGGGCATCAGCCTGAAGGTCCAGTGCACACAAGCCGATCAGGAGTTTTCTTGTGTTTTTGCTGGTGACCCAACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CAA 72 bp | GTCACCAGCAAAAACACAAGAAAACTCCTGATCGGCTaGTGTGCACTGGACCTTCAGGCTGATGCCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VTSKNTRKLLIG*CALDLQADALL Trigger: GAGCAGGGCATCAGCCTGAAGGTCCAGTGCACACAAGCCGATCAGGAGTTTTCTTGTGTTTTTGCTGGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CAA 72 bp | GGATCTCTAATGGCCATGGTCTGGGTCGCAGCTGGATaGAGTGTGATGTCTTCTTTGACCCTGTTTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSLMAMVWVAAG*SVMSSLTLFGS Trigger: GGAGCCAAACAGGGTCAAAGAAGACATCACACTCAATCCAGCTGCGACCCAGACCATGGCCATTAGAGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CAA 90 bp | GAGACCTCTGCTTTCTCCTTCCTGGGCTTCGTGTTTCCACGTGCGTaGGGGTTCACCAGCTTGAGGTTAGACTCTGGAAATCTCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ETSAFSFLGFVFPRA*GFTSLRLDSGNLFL Trigger: CAGAAAGAGATTTCCAGAGTCTAACCTCAAGCTGGTGAACCCCAACGCACGTGGAAACACGAAGCCCAGGAAGGAGAAAGCAGAGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CAA 90 bp | AGACACTCTGGATCTCTAATGGCCATGGTCTGGGTCGCAGCTGGATaGAGTGTGATGTCTTCTTTGACCCTGTTTGGCTCCGTGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RHSGSLMAMVWVAAG*SVMSSLTLFGSVET Trigger: TGTCTCCACGGAGCCAAACAGGGTCAAAGAAGACATCACACTCAATCCAGCTGCGACCCAGACCATGGCCATTAGAGATCCAGAGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS GCA 72 bp | TGCACACTCTGGTCTTCAAGACACTCTTGGCGTTCCTaGAGATATTTTTCTGTTTGCGCAGCGTGCGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CTLWSSRHSWRS*RYFSVCAACGQ Trigger: TTGCCCGCACGCTGCGCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGACCAGAGTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | GTCAGAGATTTAGATGTCCTGCTTCTCTGCTTATTCTaGGCCTTCCCTAACGAGGGAGCTGAACCCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: VRDLDVLLLCLF*AFPNEGAEPST Trigger: GGTAGAGGGTTCAGCTCCCTCGTTAGGGAAGGCCCAGAATAAGCAGAGAAGCAGGACATCTAAATCTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | CTCTGGATCTCTAATGGCCATGGTCTGGGTCGCAGCTaGATTGAGTGTGATGTCTTCTTTGACCCTGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LWISNGHGLGRS*IECDVFFDPVW Trigger: CCAAACAGGGTCAAAGAAGACATCACACTCAATCCAGCTGCGACCCAGACCATGGCCATTAGAGATCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CAA 72 bp | GGCTTCGTGTTTCCACGTGCGTTGGGGTTCACCAGCTaGAGGTTAGACTCTGGAAATCTCTTTCTGCACACT | + |
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Preference number: 6 (lower is better) Translates to: GFVFPRALGFTS*RLDSGNLFLHT Trigger: AGTGTGCAGAAAGAGATTTCCAGAGTCTAACCTCAAGCTGGTGAACCCCAACGCACGTGGAAACACGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS TCA 72 bp | TCAGTTGGGTCACCAGCAAAAACACAAGAAAACTCCTaGTCGGCTTGTGTGCACTGGACCTTCAGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: SVGSPAKTQENS*SACVHWTFRLM Trigger: CATCAGCCTGAAGGTCCAGTGCACACAAGCCGATCAGGAGTTTTCTTGTGTTTTTGCTGGTGACCCAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS GCA 72 bp | AGACACTCTTGGCGTTCCTGCAGATATTTTTCTGTTTaGGCAGCGTGCGGGCAACCTGTTTCCAGTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: RHSWRSCRYFSV*AACGQPVSSRS Trigger: AGATCTACTGGAAACAGGTTGCCCGCACGCTGCGCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | AGCTGGATTGAGTGTGATGTCTTCTTTGACCCTGTTTaGCTCCGTGGAGACAGCTTCTTGGACCTTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SWIECDVFFDPV*LRGDSFLDLVV Trigger: CACAACAAGGTCCAAGAAGCTGTCTCCACGGAGCCAAACAGGGTCAAAGAAGACATCACACTCAATCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | TCCTCTAGACACTCTGGATCTCTAATGGCCATGGTCTaGGTCGCAGCTGGATTGAGTGTGATGTCTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSRHSGSLMAMV*VAAGLSVMSSL Trigger: CAAAGAAGACATCACACTCAATCCAGCTGCGACCCAGACCATGGCCATTAGAGATCCAGAGTGTCTAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | ATCTCTTTCTGCACACTCTGGTCTTCAAGACACTCTTaGCGTTCCTGCAGATATTTTTCTGTTTGCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ISFCTLWSSRHS*RSCRYFSVCAA Trigger: CGCTGCGCAAACAGAAAAATATCTGCAGGAACGCCAAGAGTGTCTTGAAGACCAGAGTGTGCAGAAAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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| CDS CCA 72 bp | GTAGATCTGGTCTTTGTCGTGTTTAAGGCAGTCAGTTaGGTCACCAGCAAAAACACAAGAAAACTCCTGATC | + |
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Preference number: 6 (lower is better) Translates to: VDLVFVVFKAVS*VTSKNTRKLLI Trigger: GATCAGGAGTTTTCTTGTGTTTTTGCTGGTGACCCAACTGACTGCCTTAAACACGACAAAGACCAGATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061299.9 ENSMUST00000199481.2 ENSMUST00000199894.2 |
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