Pregenerated sensors for FGF9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021974Ensembl transcript IDs: ENSMUST00000022545.14, ENSMUST00000074654.12, ENSMUST00000165526.9
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCCAGCCCACAGTGGCATGGGGCTGCCATCCAACAGGCTTTGTaGCTCTTAAAGCAGGAACTGAACCTGATGCAAACCGGAGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SPSPQWHGAAIQQAL*LLKQELNLMQTGEL Trigger: CAGCTCTCCGGTTTGCATCAGGTTCAGTTCCTGCTTTAAGAGGCACAAAGCCTGTTGGATGGCAGCCCCATGCCACTGTGGGCTGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 90 bp | ACCAACGAGAGAGTGGTTTGGCTATCTGAGCATCTGCTTCTGAGCTaGAATCACCCAGCCCACAGTGGCATGGGGCTGCCATCCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: TNERVVWLSEHLLLS*NHPAHSGMGLPSNR Trigger: CCTGTTGGATGGCAGCCCCATGCCACTGTGGGCTGGGTGATTCCAGCTCAGAAGCAGATGCTCAGATAGCCAAACCACTCTCTCGTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 90 bp | GACTTTGACCAGGATGCCAGTGTTGGCACCAACGAGAGAGTGGTTTaGCTATCTGAGCATCTGCTTCTGAGCTGGAATCACCCAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: DFDQDASVGTNERVV*LSEHLLLSWNHPAH Trigger: GTGGGCTGGGTGATTCCAGCTCAGAAGCAGATGCTCAGATAGCCAAACCACTCTCTCGTTGGTGCCAACACTGGCATCCTGGTCAAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR GCA 90 bp | TCCAACACTGACCTGGCATGTCCTTCAACACTGCTTGGGGACATTTaGATGACAGATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACT | + |
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Preference number: 1 (lower is better) Translates to: SNTDLACPSTLLGDI*MTDGKVVQSTLAKT Trigger: AGTCTTAGCCAGGGTGGACTGAACCACCTTCCCATCTGTCATGCAAATGTCCCCAAGCAGTGTTGAAGGACATGCCAGGTCAGTGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 90 bp | CTAGGCAGCCCTCCAGGAGGACCAGCCAGTAAGTGCAGAGCAAATTaGCAAGTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACA | + |
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Preference number: 1 (lower is better) Translates to: LGSPPGGPASKCRAN*QVLIQASIIHMHAT Trigger: TGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGACTTGCCAATTTGCTCTGCACTTACTGGCTGGTCCTCCTGGAGGGCTGCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR GCA 90 bp | CTGTTTAGAAAGCGGGTGGGGGATCCACAGAACACACATGCAGAATaGATCCTGATCTTTATCCTATTGCCTGATCCACAGAGCGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: LFRKRVGDPQNTHAE*ILIFILLPDPQSVW Trigger: CCAGACGCTCTGTGGATCAGGCAATAGGATAAAGATCAGGATGCATTCTGCATGTGTGTTCTGTGGATCCCCCACCCGCTTTCTAAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 90 bp | ACAGAACACACATGCAGAATGCATCCTGATCTTTATCCTATTGCCTaGTCCACAGAGCGTCTGGCTCCTCTCTCTGTGACATCTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: TEHTCRMHPDLYPIA*STERLAPLSVTSLS Trigger: ACTGAGAGATGTCACAGAGAGAGGAGCCAGACGCTCTGTGGATCAGGCAATAGGATAAAGATCAGGATGCATTCTGCATGTGTGTTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 90 bp | GCTGGAAAGAATCCATCCACTTCCCAGGGTGATACACAGAAACCCTaGGCCATCTTCCCTCCCAGAATGCCTATTTACATAAATAGCATA | + |
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Preference number: 1 (lower is better) Translates to: AGKNPSTSQGDTQKP*AIFPPRMPIYINSI Trigger: TATGCTATTTATGTAAATAGGCATTCTGGGAGGGAAGATGGCTCAGGGTTTCTGTGTATCACCCTGGGAAGTGGATGGATTCTTTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR GCA 90 bp | CGTATACCTACTTGCATGAAGTTACCACAGGTTCATAGCAGACTTTaGCATTTAATGCCTACAGAGCCTAAAGCTTCCAAAATGCCTATC | + |
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Preference number: 1 (lower is better) Translates to: RIPTCMKLPQVHSRL*HLMPTEPKASKMPI Trigger: GATAGGCATTTTGGAAGCTTTAGGCTCTGTAGGCATTAAATGGCAAAGTCTGCTATGAACCTGTGGTAACTTCATGCAAGTAGGTATACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCGTGGCGCGCTGCAGTCCCCTCCACTCACTCATGCACTCGCACCCTCTGCAGCCTCTCTCCCCTaGTTTTGTAATAAATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: CPRGALQSPPLTHALAPSAASLP*FCNKSS Trigger: GCTTGATTTATTACAAAAGCAGGGGAGAGAGGCTGC...AGAGGGTGCGAGTGCATGAGTGAGTGGAGGGGACTGCAGCGCGCCACGAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | AGACTGCTCTCTCCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCAGGACCAGCCAGTAAGTaGAGAGCAAATTGGCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: RLLSPRLWKGSVPLSRPPGPASK*RANWQV Trigger: GACTTGCCAATTTGCTCTGCACTTACTGGCTGGTCC...TGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGGAGAGAGCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR CAA 90 bp | TGCATGACAGATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACTTaGACCAGGATGCCAGTGTTGGCACCAACGAGAGAGTGGTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CMTDGKVVQSTLAKT*TRMPVLAPTREWFG Trigger: GCCAAACCACTCTCTCGTTGGTGCCAACACTGGCATCCTGGTCAAAGTCTTAGCCAGGGTGGACTGAACCACCTTCCCATCTGTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | AGACTGCTCTCTCCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCAAAAATCCTGATGAGTTaGAGTATGGCAGCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RLLSPRLWKGSVPLSRPPKILMS*SMAAVL Trigger: CAGCACAGCTGCCATACTTCAACTCATCAGGATTTT...TGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGGAGAGAGCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTGCTCTCTCCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCAAAGTGCAGAGCAAATTaGCAAGTCCTCATCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RLLSPRLWKGSVPLSRPPKCRAN*QVLIQA Trigger: AGCTTGGATGAGGACTTGCCAATTTGCTCTGCACTT...TGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGGAGAGAGCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR CAA 90 bp | CTCAGGACAGGAAGACAGGCATTTCTAGACCACAACAGCTATCCCTaGCCAGTGACACGCTTTCGCTTCCCATCGAGAATGTGCATCCAA | + |
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Preference number: 2 (lower is better) Translates to: LRTGRQAFLDHNSYP*PVTRFRFPSRMCIQ Trigger: TTGGATGCACATTCTCGATGGGAAGCGAAAGCGTGTCACTGGCAAGGGATAGCTGTTGTGGTCTAGAAATGCCTGTCTTCCTGTCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | CCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCAGCCAAAAATCCTGTATGGCAGCTGTGCTaGTATAGAATGAAGTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PRLWKGSVPLSRPPAKNPVWQLC*YRMKFN Trigger: GTTGAACTTCATTCTATATCAGCACAGCTGCCATAC...AGGATTTTTGGCTGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | AGACTGCTCTCTCCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCACTTCCATCATTCATATaGATGCGACAAAGTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RLLSPRLWKGSVPLSRPPLPSFI*MRQSLA Trigger: TGCCAAACTTTGTCGCATGCATATGAATGATGGAAG...TGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGGAGAGAGCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | CCGCCCAGTTACACTGAGAGACTGAATTACGAGAGAGGAAAATTACAGACACGAAAGGCAGTGTTCCCTTaGGCAGGCCACCAGCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PPSYTERLNYERGKLQTRKAVFP*AGHQPK Trigger: TTTTGGCTGGTGGCCTGCTCAAGGGAACACTGCCTT...TCGTGTCTGTAATTTTCCTCTCTCGTAATTCAGTCTCTCAGTGTAACTGGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | CCACGCCTGTGGAAAGGCAGTGTTCCCTTGAGCAGGCCACCAGCCAAAAATCCTCTTCCATCATTCATATaGATGCGACAAAGTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PRLWKGSVPLSRPPAKNPLPSFI*MRQSLA Trigger: TGCCAAACTTTGTCGCATGCATATGAATGATGGAAG...AGGATTTTTGGCTGGTGGCCTGCTCAAGGGAACACTGCCTTTCCACAGGCGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | GAACTGATAGTCTTTTTAAGTGAGACTGCTCTCTCCACGCCTGTGGAAAGGCAGGGACCAGCCAGTAAGTaGAGAGCAAATTGGCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ELIVFLSETALSTPVERQGPASK*RANWQV Trigger: GACTTGCCAATTTGCTCTGCACTTACTGGCTGGTCC...CTGCCTTTCCACAGGCGTGGAGAGAGCAGTCTCACTTAAAAAGACTATCAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | CCGCCCAGTTACACTGAGAGACTGAATTACGAGAGAGGAAAATTACAGACACGAAAGCAGTCTGAAGAGTaGCTCCTCAGTGTCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: PPSYTERLNYERGKLQTRKQSEE*LLSVMS Trigger: GCTCATGACACTGAGGAGTCACTCTTCAGACTGCTT...TCGTGTCTGTAATTTTCCTCTCTCGTAATTCAGTCTCTCAGTGTAACTGGGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | GGGGACATTTGCATGACAGATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACTTCTCGTATACCTACTTaGATGAAGTTACCACAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GDICMTDGKVVQSTLAKTSRIPT*MKLPQV Trigger: AACCTGTGGTAACTTCATGCAAGTAGGTATACGAGA...AGTCTTAGCCAGGGTGGACTGAACCACCTTCCCATCTGTCATGCAAATGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGACATTTGCATGACAGATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACTGTGCTTTTGGATAAATaGAAATCTGAGTATGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: GDICMTDGKVVQSTLAKTVLLDK*KSEYVY Trigger: GTACACATACTCAGATTTCCATTTATCCAAAAGCAC...AGTCTTAGCCAGGGTGGACTGAACCACCTTCCCATCTGTCATGCAAATGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGATTTGCTCAGGACAGGAAGACAGGCATTTCTAGACCACAACAGCTATCCCGTATACCTACTTGCATaGAGTTACCACAGGTTCATA | + |
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Preference number: 2 (lower is better) Translates to: MDLLRTGRQAFLDHNSYPVYLLA*SYHRFI Trigger: TATGAACCTGTGGTAACTTCATGCAAGTAGGTATAC...GGGATAGCTGTTGTGGTCTAGAAATGCCTGTCTTCCTGTCCTGAGCAAATCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAAGTAAGACATACACCAACCCTCATATGTTCCAACCGCCCAGTTACACTCTGGGATAAGCTATaGAACAAGCAGTCTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKQVRHTPTLICSNRPVTLWDKL*NKQSEE Trigger: CTCTTCAGACTGCTTGTTTCATAGCTTATCCCAGAG...TGTAACTGGGCGGTTGGAACATATGAGGGTTGGTGTATGTCTTACTTGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCAGGCAAGTGCAGAGCAAATTaGCAAGTCCTCATCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSTDQKCKSVSISQHASGKCRAN*QVLIQA Trigger: AGCTTGGATGAGGACTTGCCAATTTGCTCTGCACTT...GCCTGATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR TCA 90 bp | AATGCCAGCTCCATTAAAAATGTTATAGTGAGCCCTAGGGTCCATGTAGAATTTATGAAACAAGCAGTCTaGAGAGTGACTCCTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: NASSIKNVIVSPRVHVEFMKQAV*RVTPQC Trigger: ACACTGAGGAGTCACTCTTCAGACTGCTTGTTTCAT...AAATTCTACATGGACCCTAGGGCTCACTATAACATTTTTAATGGAGCTGGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCAGGCCTTCCATCATTCATATaGATGCGACAAAGTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSTDQKCKSVSISQHASGLPSFI*MRQSLA Trigger: TGCCAAACTTTGTCGCATGCATATGAATGATGGAAG...GCCTGATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | AATGAAGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATGCAGCCTCTCTCCCCTaGTTTTGTAATAAATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: NEVQLIKNVKACLFPSMHAASLP*FCNKSS Trigger: GCTTGATTTATTACAAAAGCAGGGGAGAGAGGCTGC...ATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACTTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTTTAAATTCACTGGGCTATGATACCAGTGTGAATGAACTGATAGTCTTTGCAGCCTCTCTCCCCTaGTTTTGTAATAAATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: FALNSLGYDTSVNELIVFAASLP*FCNKSS Trigger: GCTTGATTTATTACAAAAGCAGGGGAGAGAGGCTGC...AAAGACTATCAGTTCATTCACACTGGTATCATAGCCCAGTGAATTTAAAGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR GCA 72 bp | CCCAGCATGCATCAGGCCATTGTCCTCGTGGCGCGCTaGAGTCCCCTCCACTCACTCATGCACTCGCACCCT | + |
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Preference number: 3 (lower is better) Translates to: PSMHQAIVLVAR*SPLHSLMHSHP Trigger: AGGGTGCGAGTGCATGAGTGAGTGGAGGGGACTGCAGCGCGCCACGAGGACAATGGCCTGATGCATGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | GCATCTGCTTCTGAGCTGGAATCACCCAGCCCACAGTaGCATGGGGCTGCCATCCAACAGGCTTTGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ASASELESPSPQ*HGAAIQQALCL Trigger: GAGGCACAAAGCCTGTTGGATGGCAGCCCCATGCCACTGTGGGCTGGGTGATTCCAGCTCAGAAGCAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | GTCTATTTCCCAGCATGCATCAGGCCATTGTCCTCGTaGCGCGCTGCAGTCCCCTCCACTCACTCATGCACT | + |
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Preference number: 3 (lower is better) Translates to: VYFPACIRPLSS*RAAVPSTHSCT Trigger: AGTGCATGAGTGAGTGGAGGGGACTGCAGCGCGCCACGAGGACAATGGCCTGATGCATGCTGGGAAATAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | AGAGTGGTTTGGCTATCTGAGCATCTGCTTCTGAGCTaGAATCACCCAGCCCACAGTGGCATGGGGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RVVWLSEHLLLS*NHPAHSGMGLP Trigger: TGGCAGCCCCATGCCACTGTGGGCTGGGTGATTCCAGCTCAGAAGCAGATGCTCAGATAGCCAAACCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | CCGGAGAGCTGGAAAGAATCCATCCACTTCCCAGGGTaGTACACAGAAACCCTGAGCCATCTTCCCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: PESWKESIHFPG*YTETLSHLPSQ Trigger: CTGGGAGGGAAGATGGCTCAGGGTTTCTGTGTATCACCCTGGGAAGTGGATGGATTCTTTCCAGCTCTCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | CAGTGTTGGCACCAACGAGAGAGTGGTTTGGCTATCTaGGCATCTGCTTCTGAGCTGGAATCACCCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: QCWHQRESGLAI*ASASELESPSP Trigger: TGGGCTGGGTGATTCCAGCTCAGAAGCAGATGCTCAGATAGCCAAACCACTCTCTCGTTGGTGCCAACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | ATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACTTTaGCCAGGATGCCAGTGTTGGCACCAACGAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: MGRWFSPPWLRL*PGCQCWHQRES Trigger: ACTCTCTCGTTGGTGCCAACACTGGCATCCTGGTCAAAGTCTTAGCCAGGGTGGACTGAACCACCTTCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | CTACAAAACAGGACCTGGCAGGGCAGGTTCCAACACTaGCCTGGCATGTCCTTCAACACTGCTTGGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: LQNRTWQGRFQH*PGMSFNTAWGH Trigger: ATGTCCCCAAGCAGTGTTGAAGGACATGCCAGGTCAGTGTTGGAACCTGCCCTGCCAGGTCCTGTTTTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR GCA 72 bp | CCACAGTGGCATGGGGCTGCCATCCAACAGGCTTTGTaGCTCTTAAAGCAGGAACTGAACCTGATGCAAACC | + |
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Preference number: 3 (lower is better) Translates to: PQWHGAAIQQAL*LLKQELNLMQT Trigger: GGTTTGCATCAGGTTCAGTTCCTGCTTTAAGAGGCACAAAGCCTGTTGGATGGCAGCCCCATGCCACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | CTCAAAATTCACGCCGGCTCCTGTTTAGAAAGCGGGTaGGGGATCCACAGAACACACATGCAGAATGCATCC | + |
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Preference number: 3 (lower is better) Translates to: LKIHAGSCLESG*GIHRTHMQNAS Trigger: GGATGCATTCTGCATGTGTGTTCTGTGGATCCCCCACCCGCTTTCTAAACAGGAGCCGGCGTGAATTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | CAGGATGCCAGTGTTGGCACCAACGAGAGAGTGGTTTaGCTATCTGAGCATCTGCTTCTGAGCTGGAATCAC | + |
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Preference number: 3 (lower is better) Translates to: QDASVGTNERVV*LSEHLLLSWNH Trigger: GTGATTCCAGCTCAGAAGCAGATGCTCAGATAGCCAAACCACTCTCTCGTTGGTGCCAACACTGGCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR CAA 90 bp | CCGCCCAGTTACACTGAGAGACTGAATTACGAGAGAGGAAAATTACAGACACGAAAAGGCAGTGTTCCCTaGAGCAGGCCACCAGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: PPSYTERLNYERGKLQTRKGSVP*SRPPAK Trigger: TTTGGCTGGTGGCCTGCTCAAGGGAACACTGCCTTT...TCGTGTCTGTAATTTTCCTCTCTCGTAATTCAGTCTCTCAGTGTAACTGGGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CCA 72 bp | CCTCCAGGAGGACCAGCCAGTAAGTGCAGAGCAAATTaGCAAGTCCTCATCCAAGCTTCCATCATTCATATG | + |
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Preference number: 3 (lower is better) Translates to: PPGGPASKCRAN*QVLIQASIIHM Trigger: CATATGAATGATGGAAGCTTGGATGAGGACTTGCCAATTTGCTCTGCACTTACTGGCTGGTCCTCCTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | TGGGGGATCCACAGAACACACATGCAGAATGCATCCTaGTCTTTATCCTATTGCCTGATCCACAGAGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: WGIHRTHMQNAS*SLSYCLIHRAS Trigger: AGACGCTCTGTGGATCAGGCAATAGGATAAAGATCAGGATGCATTCTGCATGTGTGTTCTGTGGATCCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR GCA 72 bp | ATTGGCAAGTCCTCATCCAAGCTTCCATCATTCATATaGATGCGACAAAGTTTGGCAACAGTGGAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: IGKSSSKLPSFI*MRQSLATVELR Trigger: CCTCAGCTCCACTGTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGACTTGCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR CAA 90 bp | AGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCAGGCTGCATGCGACAAAGTTaGGCAACAGTGGAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSTDQKCKSVSISQHASGCMRQS*ATVELR Trigger: CCTCAGCTCCACTGTTGCCAAACTTTGTCGCATGCA...GCCTGATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| 3UTR-3UTR CAA 90 bp | AATGCCAGCTCCATTAAAAATGTTATAGTGAGCCCTAGGGTCCATGTAGAATTTTGCATGCGACAAAGTTaGGCAACAGTGGAGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: NASSIKNVIVSPRVHVEFCMRQS*ATVELR Trigger: CCTCAGCTCCACTGTTGCCAAACTTTGTCGCATGCA...AAATTCTACATGGACCCTAGGGCTCACTATAACATTTTTAATGGAGCTGGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | CTCATATGTTCCAACCGCCCAGTTACACTGAGAGACTaGATTACGAGAGAGGAAAATTACAGACACGAAATG | + |
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Preference number: 3 (lower is better) Translates to: LICSNRPVTLRD*ITREENYRHEM Trigger: CATTTCGTGTCTGTAATTTTCCTCTCTCGTAATTCAGTCTCTCAGTGTAACTGGGCGGTTGGAACATATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR-3UTR CAA 90 bp | AATGCCAGCTCCATTAAAAATGTTATAGTGAGCCCTAGGGTCCATGTAGAATTTGGATTTTCCTCTCCCTaGGGAATTTTTAATCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: NASSIKNVIVSPRVHVEFGFSSP*GIFNQC Trigger: GCACTGATTAAAAATTCCCAAGGGAGAGGAAAATCC...AAATTCTACATGGACCCTAGGGCTCACTATAACATTTTTAATGGAGCTGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | TTAGGGCCATTAGAATTTCTCGTATACCTACTTGCATaGAGTTACCACAGGTTCATAGCAGACTTTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: LGPLEFLVYLLA*SYHRFIADFAI Trigger: AATGGCAAAGTCTGCTATGAACCTGTGGTAACTTCATGCAAGTAGGTATACGAGAAATTCTAATGGCCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR GCA 72 bp | TACATTAGGGCCATTAGAATTTCTCGTATACCTACTTaGATGAAGTTACCACAGGTTCATAGCAGACTTTGC | + |
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Preference number: 3 (lower is better) Translates to: YIRAIRISRIPT*MKLPQVHSRLC Trigger: GCAAAGTCTGCTATGAACCTGTGGTAACTTCATGCAAGTAGGTATACGAGAAATTCTAATGGCCCTAATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR TCA 72 bp | TCACTTTCAATTTCCCCACATCAACGAGCTAGAGAGTaGGAATGTGTTATAGATTTCTTTATTGCTTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SLSISPHQRARE*ECVIDFFIASR Trigger: TCTTGAAGCAATAAAGAAATCTATAACACATTCTCACTCTCTAGCTCGTTGATGTGGGGAAATTGAAAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CAA 72 bp | GATGGGAAGGTGGTTCAGTCCACCCTGGCTAAGACTTaGACCAGGATGCCAGTGTTGGCACCAACGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: DGKVVQSTLAKT*TRMPVLAPTRE Trigger: CTCTCTCGTTGGTGCCAACACTGGCATCCTGGTCAAAGTCTTAGCCAGGGTGGACTGAACCACCTTCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| 3UTR CAA 72 bp | TCCACCCTGGCTAAGACTTTGACCAGGATGCCAGTGTaGGCACCAACGAGAGAGTGGTTTGGCTATCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: STLAKTLTRMPV*APTREWFGYLS Trigger: GCTCAGATAGCCAAACCACTCTCTCGTTGGTGCCAACACTGGCATCCTGGTCAAAGTCTTAGCCAGGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| CDS-3UTR TCA 90 bp | CAAGTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACAAAGTTTGGCAACCCCCCTGCTTCGGACTaGCCCAGGTGGTCACTTAGC | + |
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Preference number: 4 (lower is better) Translates to: QVLIQASIIHMHATKFGNPPASD*PRWSLS Trigger: GCTAAGTGACCACCTGGGTCAGTCCGAAGCAGGGGG...GTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGACTTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR CCA 90 bp | GAACTGATAGTCTTTTTAAGTGAGACTGCTCTCTCCACGCCTGTGGAAAGGCAGATGCCGAAGCGGCTGTaGTCTTTCCTGGTTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ELIVFLSETALSTPVERQMPKRL*SFLVPW Trigger: CCAGGGAACCAGGAAAGACCACAGCCGCTTCGGCAT...CTGCCTTTCCACAGGCGTGGAGAGAGCAGTCTCACTTAAAAAGACTATCAGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR TCA 90 bp | CAAGTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACAAAGTTTGGCAACCCACACCGCGAATGCTaGCCAGGCCCACTGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: QVLIQASIIHMHATKFGNPHREC*PGPLLY Trigger: GTATAGCAGTGGGCCTGGTCAGCATTCGCGGTGTGG...GTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR GCA 90 bp | CAAGTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACAAAGTTTGGCAACCCCCCTTCTCGTTCATaGCGAGGTAGAGTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QVLIQASIIHMHATKFGNPPSRS*RGRVHC Trigger: ACAGTGGACTCTACCTCGGCATGAACGAGAAGGGGG...GTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGACTTG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR CCA 90 bp | GTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACAAAGTTTGGCAACAGTTCTTTCCTGGTTCCCTaGATAGTACCGTTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLIQASIIHMHATKFGNSSFLVP*IVPLGK Trigger: CTTCCCCAACGGTACTATCCAGGGAACCAGGAAAGA...ACTGTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR CCA 90 bp | GGCTGCCATCCAACAGGCTTTGTGCCTCTTAAAGCAGGAACTGAACCTGATGCACATGTTTATAGAGGTTaGAAGAGTAGGTGTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: GCHPTGFVPLKAGTEPDAHVYRG*KSRCCT Trigger: GGTACAACACCTACTCTTCCAACCTCTATAAACATG...TGCATCAGGTTCAGTTCCTGCTTTAAGAGGCACAAAGCCTGTTGGATGGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| CDS-3UTR TCA 90 bp | GTCCTCATCCAAGCTTCCATCATTCATATGCATGCGACAAAGTTTGGCAACAGTAGAATCCCCTTTAAATaGTCCAAGTCCGTGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: VLIQASIIHMHATKFGNSRIPFK*SKSVTA Trigger: CGCAGTCACGGACTTGGATCATTTAAAGGGGATTCT...ACTGTTGCCAAACTTTGTCGCATGCATATGAATGATGGAAGCTTGGATGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR GCA 90 bp | AATGAAGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATGTCCTGCAGTACAGCTaGCTCCGCCTGAGAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: NEVQLIKNVKACLFPSMHVLQYS*LRLRIP Trigger: GGGGATTCTCAGGCGGAGGCAGCTGTACTGCAGGAC...ATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACTTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR GCA 90 bp | AGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCAGGCGCTGACCAGGCCCACTaGTATACTGATAAATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSTDQKCKSVSISQHASGADQAH*YTDKFQ Trigger: CTGGAATTTATCAGTATAGCAGTGGGCCTGGTCAGC...GCCTGATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| CDS-3UTR GCA 90 bp | TTTGCTTTAAATTCACTGGGCTATGATACCAGTGTGAATGAACTGATAGTCTTTAATGAAATCCAGTCCTaGAGTACAGCTGCCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FALNSLGYDTSVNELIVFNEIQS*STAASA Trigger: GGCGGAGGCAGCTGTACTGCAGGACTGGATTTCATT...AAAGACTATCAGTTCATTCACACTGGTATCATAGCCCAGTGAATTTAAAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022545.14 |
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| 3UTR CAA 72 bp | TACGAGAGAGGAAAATTACAGACACGAAATGAAGGGTaGAAACCCAGTTTATCTTTAATCCTCTGGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: YERGKLQTRNEG*KPSLSLILWDK Trigger: CTTATCCCAGAGGATTAAAGATAAACTGGGTTTCAACCCTTCATTTCGTGTCTGTAATTTTCCTCTCTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165526.9 |
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| CDS-3UTR CCA 90 bp | AATGAAGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCATGTTTATAGAGGTTaGAAGAGTAGGTGTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: NEVQLIKNVKACLFPSMHHVYRG*KSRCCT Trigger: GGTACAACACCTACTCTTCCAACCTCTATAAACATG...ATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACTTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| CDS-3UTR CAA 90 bp | AAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATCAGGCCATTGTCCTCGTGTATAGTTCAGGTACTTaGTCAGGGTCCACTGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: KNVKACLFPSMHQAIVLVYSSGT*SGSTGL Trigger: TAGACCAGTGGACCCTGACAAAGTACCTGAACTATA...CACGAGGACAATGGCCTGATGCATGCTGGGAAATAGACACGCTTTTACATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| CDS-3UTR CAA 90 bp | AATGAAGTTCAACTGATCAAAAATGTAAAAGCGTGTCTATTTCCCAGCATGCATTATAGTTCAGGTACTTaGTCAGGGTCCACTGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: NEVQLIKNVKACLFPSMHYSSGT*SGSTGL Trigger: TAGACCAGTGGACCCTGACAAAGTACCTGAACTATA...ATGCATGCTGGGAAATAGACACGCTTTTACATTTTTGATCAGTTGAACTTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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| CDS-3UTR CAA 90 bp | TTTGCTTTAAATTCACTGGGCTATGATACCAGTGTGAATGAACTGATAGTCTTTTATAGTTCAGGTACTTaGTCAGGGTCCACTGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: FALNSLGYDTSVNELIVFYSSGT*SGSTGL Trigger: TAGACCAGTGGACCCTGACAAAGTACCTGAACTATA...AAAGACTATCAGTTCATTCACACTGGTATCATAGCCCAGTGAATTTAAAGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022545.14 ENSMUST00000074654.12 ENSMUST00000165526.9 |
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