Pregenerated sensors for FGF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025219Ensembl transcript IDs: ENSMUST00000026240.14, ENSMUST00000026241.12, ENSMUST00000111924.8, ENSMUST00000111925.2, ENSMUST00000111927.8, ENSMUST00000111928.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCTCTGCTCGGTGGTGTaGTGGCCCCGCGGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGLCSVV*WPRGRR Trigger: GCGCCTGCCGCGGGGCCACCACACCACCGAGCAGAG...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGGGGGCCCAAGTCCTCTaGCTGCCGCGCAGGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGGAQVL*LPRRLR Trigger: GCGCAGCCTGCGCGGCAGCCAGAGGACTTGGGCCCC...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 76% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCCCGGCCCCCGCTTCTaGGCAGCGCTCCTTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGPGPRF*AALLTW Trigger: CCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCCGGG...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
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| CDS-3UTR CCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGTGCTCGGTGGTGTGGTaGCCCCGCGGCAGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGECSVVW*PRGRRF Trigger: GAAGCGCCTGCCGCGGGGCCACCACACCACCGAGCA...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGTGCTCGGTGGTGTGGTaGCCCCGCGGCAGGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGCSVVW*PRGRRF Trigger: GAAGCGCCTGCCGCGGGGCCACCACACCACCGAGCA...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCTCTGCTCGGTGGTGTaGTGGCCCCGCGGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWLCSVV*WPRGRR Trigger: GCGCCTGCCGCGGGGCCACCACACCACCGAGCAGAG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGGCAGGCTCTGCTCGGTaGTGTGGTGGCCCCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGAGSAR*CGGPAA Trigger: TGCCGCGGGGCCACCACACCACCGAGCAGAGCCTGC...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGGGGCCCAAGTCCTCTaGCTGCCGCGCAGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWGAQVL*LPRRLR Trigger: GCGCAGCCTGCGCGGCAGCCAGAGGACTTGGGCCCC...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 74% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGGGGCCCAAGTCCTCTaGCTGCCGCGCAGGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWGAQVL*LPRRLR Trigger: GCGCAGCCTGCGCGGCAGCCAGAGGACTTGGGCCCC...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 74% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR TCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGAGGCGGCGGCTGAGCTaGTCCGTCACCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGERRRLS*SVTRLC Trigger: GCAGAGCCTGGTGACGGATCAGCTCAGCCGCCGCCT...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGCAGGCTCTGCTCGGTaGTGTGGTGGCCCCGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWAGSAR*CGGPAA Trigger: TGCCGCGGGGCCACCACACCACCGAGCAGAGCCTGC...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR TCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGAGGCGGCGGCTGAGCTaGTCCGTCACCAGGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWRRRLS*SVTRLC Trigger: GCAGAGCCTGGTGACGGATCAGCTCAGCCGCCGCCT...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGCTCGGAGCAGGGAAGTaGGCTCCCTGCCCAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWLGAGK*APCPAQ Trigger: CTGCGCTGGGCAGGGAGCCCACTTCCCTGCTCCGAG...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTAGGCGGCGGCTGAGCTaGTCCGTCACCAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGRRRLS*SVTRLC Trigger: GCAGAGCCTGGTGACGGATCAGCTCAGCCGCCGCCT...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR TCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGAAGTGCACCTCGCGCTaGTGCTGGCGCGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGEKCTSR*CWRVLE Trigger: CTCCAAGACGCGCCAGCATCAGCGCGAGGTGCACTT...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGTCGAAGCGCAGGCTCTaGTCGGTGGTGTGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWSKRRL*SVVWWP Trigger: GGGCCACCACACCACCGAGCAGAGCCTGCGCTTCGA...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTCCGCCCGGGCCTTCCTaGGCTTGGAGGCAGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGPPGPS*AWRQRT Trigger: GGTTCTCTGCCTCCAAGCCCAGGAAGGCCCGGGCGG...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
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| CDS-3UTR CCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGTGTTGGGAAACACCCTaGGGCTCCCGGCCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWCWETP*GSRPAR Trigger: CCGAGCTGGCCGGGAGCCCCAGGGTGTTTCCCAACA...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
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| CDS-3UTR TCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGAAGTGCACCTCGCGCTaGTGCTGGCGCGTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWKCTSR*CWRVLE Trigger: CTCCAAGACGCGCCAGCATCAGCGCGAGGTGCACTT...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGTCTTTCCAGCCCTGCTaGGCTGGCCGAAGGGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWSFQPC*AGRRVG Trigger: ACCGACCCTTCGGCCAGCGCAGCAGGGCTGGAAAGA...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
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| CDS-3UTR GCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGTTGTTGGCCAGGACCTaGACGTGCTTCCCGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGELLART*TCFPLV Trigger: CACCAGCGGGAAGCACGTGCAGGTCCTGGCCAACAA...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGTTGTTGGCCAGGACCTaGACGTGCTTCCCGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGLLART*TCFPLV Trigger: CACCAGCGGGAAGCACGTGCAGGTCCTGGCCAACAA...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTTCGAAGCGCAGGCTCTaGTCGGTGGTGTGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGSKRRL*SVVWWP Trigger: GGGCCACCACACCACCGAGCAGAGCCTGCGCTTCGA...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGGCAGCGCTCCTTACCTaGGCTTGGAGGCAGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGEAALLT*AWRQRT Trigger: GGTTCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGC...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
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| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGACCAGCCCTCGTACTTaGCGTTCTGCAGCGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGTSPRT*RSAAPC Trigger: ACACGGCGCTGCAGAACGCCAAGTACGAGGGCTGGT...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGGGCCTTCCTGGGCTTaGAGGCAGAGAACCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWGPSWA*RQRTSK Trigger: CTTGCTGGTTCTCTGCCTCCAAGCCCAGGAAGGCCC...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTTTGTTGGCCAGGACCTaGACGTGCTTCCCGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGLLART*TCFPLV Trigger: CACCAGCGGGAAGCACGTGCAGGTCCTGGCCAACAA...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGGGGTCTCCGTCTTCTaGCATGGCGTTGATGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWGVSVF*HGVDAL Trigger: AAGCGCATCAACGCCATGGCAGAAGACGGAGACCCC...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGTCCGTCACCAGGCTCTaGTCCCTCACATGCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGSVTRL*SLTCCV Trigger: TACACAGCATGTGAGGGAGCAGAGCCTGGTGACGGA...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026240.14 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTACCAGCCCTCGTACTTaGCGTTCTGCAGCGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGTSPRT*RSAAPC Trigger: ACACGGCGCTGCAGAACGCCAAGTACGAGGGCTGGT...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCAGAGAACCAGCAAGTaGAACAGCAGGCAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWQRTSK*NSRQLS Trigger: GCTGAGCTGCCTGCTGTTGCACTTGCTGGTTCTCTG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTTCCGTCACCAGGCTCTaGTCCCTCACATGTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGSVTRL*SLTCRC Trigger: ACAGCGACATGTGAGGGAGCAGAGCCTGGTGACGGA...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
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| CDS-3UTR GCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGTCCGTCACCAGGCTCTaGTCCCTCACATGCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWSVTRL*SLTCCV Trigger: TACACAGCATGTGAGGGAGCAGAGCCTGGTGACGGA...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026240.14 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTCAGAGAACCAGCAAGTaGAACAGCAGGCAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGQRTSK*NSRQLS Trigger: GCTGAGCTGCCTGCTGTTGCACTTGCTGGTTCTCTG...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGCAGTCCTTGCCTTTaGCGTTGCTCTTGGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGRSPCL*RCSWQL Trigger: TAATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCG...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCCTTGCCTTTGCCGTTaGTCTTGGCAATTAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWPCLCR*SWQLAS Trigger: GGAAGCTAATTGCCAAGAGCAACGGCAAAGGCAAGG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGCCTTGCCTTTGCCGTTaGTCTTGGCAATTAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWPCLCR*SWQLAS Trigger: GGAAGCTAATTGCCAAGAGCAACGGCAAAGGCAAGG...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGCGCAGTCCTTGCCTTTaGCGTTGCTCTTGGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWRSPCL*RCSWQL Trigger: TAATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCG...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCGCAGTCCTTGCCTTTaGCGTTGCTCTTGGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWRSPCL*RCSWQL Trigger: TAATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGTCCCCTTCTTGTTCATaGAGATGTAGAGACCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGSPSCS*RCRDLS Trigger: AGACAGGTCTCTACATCTGCATGAACAAGAAGGGGA...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGTCCCCTTCTTGTTCATaGAGATGTAGAGACCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGESPSCS*RCRDLS Trigger: AGACAGGTCTCTACATCTGCATGAACAAGAAGGGGA...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
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| CDS-3UTR GCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCTCTGCTCCCTCACATaGTGTGTAAAATTAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGLCSLT*CVKLGE Trigger: CTCACCTAATTTTACACAGCATGTGAGGGAGCAGAG...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026240.14 ENSMUST00000111928.8 |
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| CDS-3UTR CCA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGGGGGTAGTTTGGGGCTaGATTTGTAAAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGGVVWG*ICKVLS Trigger: GGAAAGAACTTTACAAATCCAGCCCCAAACTACCCC...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS-3UTR CCA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCTCCTCGGGGTAGTTTaGGGCTGGATTTGTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CAAELPLDSSAGWVGRSWLLGVV*GWICKV Trigger: AACTTTACAAATCCAGCCCCAAACTACCCCGAGGAG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS-3UTR TCA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGAAATTAGGTGAGGACTaGACAGTTACCTGTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRAPAGFLGRLGGEELGEKLGED*TVTCWE Trigger: TTCCCAACAGGTAACTGTTCAGTCCTCACCTAATTT...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTAAATTAGGTGAGGACTaGACAGTTACCTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGKLGED*TVTWAW Trigger: CCAAGCCCAGGTAACTGTTCAGTCCTCACCTAATTT...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111928.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGTCCCCTTCTTGTTCATaGAGATGTAGAGACCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWSPSCS*RCRDLS Trigger: AGACAGGTCTCTACATCTGCATGAACAAGAAGGGGA...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGCTCTGCTCCCTCACATaGTGTGTAAAATTAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: APPLCCAAELPLDSSAGWLCSLT*CVKLGE Trigger: CTCACCTAATTTTACACAGCATGTGAGGGAGCAGAG...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026240.14 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGGCGTTGATGCGCTTGTaGGCCAGGACCTGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGALMRL*ARTCTC Trigger: GCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGC...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGGCGTTGATGCGCTTGTaGGCCAGGACCTGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRAPAGFLGRLGGEELGEALMRL*ARTCTC Trigger: GCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGC...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGTTGCGGGGCCGGCCCTaGCGGGTAAAGGCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CAAELPLDSSAGWVGRSWLRGRP*RVKAMY Trigger: GTACATGGCCTTTACCCGCAAGGGCCGGCCCCGCAA...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS CCA 90 bp | CCCGCGCCCGGCCCCCGCTTCTGCGCAGCGCTCCTTACCTGGGCTTaGAGGCAGAGAACCAGCAAGTGCAACAGCAGGCAGCTCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGPRFCAALLTWA*RQRTSKCNSRQLSA Trigger: CGCGCTGAGCTGCCTGCTGTTGCACTTGCTGGTTCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCCGGGCGCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTTTGCGGGGCCGGCCCTaGCGGGTAAAGGCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGLRGRP*RVKAMY Trigger: GTACATGGCCTTTACCCGCAAGGGCCGGCCCCGCAA...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGCGGGCCTTCCTGGGCTaGGAGGCAGAGAACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CAAELPLDSSAGWVGRSWRAFLG*EAENQQ Trigger: TTGCTGGTTCTCTGCCTCCAAGCCCAGGAAGGCCCG...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
||
| CDS TCA 90 bp | GCAGGCTCTGCTCGGTGGTGTGGTGGCCCCGCGGCAGGCGCTTCATaGAGTGCACCTCGCGCTGATGCTGGCGCGTCTTGGAGCCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSARWCGGPAAGAS*SAPRADAGASWSPC Trigger: GCAAGGGCTCCAAGACGCGCCAGCATCAGCGCGAGGTGCACTTCATGAAGCGCCTGCCGCGGGGCCACCACACCACCGAGCAGAGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111924.8 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS GCA 90 bp | TGCCCGAGAGTGTCAGCTGGGTTCCCCGCGCCCGGCCCCCGCTTCTaGGCAGCGCTCCTTACCTGGGCTTGGAGGCAGAGAACCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPRVSAGFPAPGPRF*AALLTWAWRQRTSK Trigger: CTTGCTGGTTCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCCGGGCGCGGGGAACCCAGCTGACACTCTCGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGCGTTGATGCGCTTGTaGGCCAGGACCTGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGALMRL*ARTCTC Trigger: GCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGC...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGTCTTCTGCCATGGCGTaGATGCGCTTGTTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRAPAGFLGRLGGEELGESSAMA*MRLLAR Trigger: CCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGA...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTATGGCGTTGATGCGCTaGTTGGCCAGGACCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGMALMR*LARTCT Trigger: CGTGCAGGTCCTGGCCAACAAGCGCATCAACGCCAT...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGTCTTCTGCCATGGCGTaGATGCGCTTGTTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CAAELPLDSSAGWVGRSWSSAMA*MRLLAR Trigger: CCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGA...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGCTCCTTACCTGGGCTaGGAGGCAGAGAACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGAPYLG*EAENQQ Trigger: TTGCTGGTTCTCTGCCTCCAAGCCCAGGTAAGGAGC...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTTCTTCTGCCATGGCGTaGATGCGCTTGTTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGSSAMA*MRLLAR Trigger: CCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGA...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGACGCAGTCCTTGCCTTaGCCGTTGCTCTTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RRAPAGFLGRLGGEELGETQSLP*PLLLAI Trigger: AATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCGT...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGGTGAATACGCAGTCCTaGCCTTTGCCGTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRAPAGFLGRLGGEELGEVNTQS*PLPLLL Trigger: CAAGAGCAACGGCAAAGGCAAGGACTGCGTATTCAC...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGAACAGTTACCTGGGCTaGGAGGCAGAGAACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPPSSRWIPRPAGWGGAGNSYLG*EAENQQ Trigger: TTGCTGGTTCTCTGCCTCCAAGCCCAGGTAACTGTT...CCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGGCGAGTCCTTGCCTTTGCCGTaGCTCTTGGCAATTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRAPAGFLGRLGGEELGESLPLP*LLAISF Trigger: GAAGCTAATTGCCAAGAGCAACGGCAAAGGCAAGGA...CTCGCCCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | TGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGGGGAGGAGCTGGACGCAGTCCTTGCCTTaGCCGTTGCTCTTGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: CAAELPLDSSAGWVGRSWTQSLP*PLLLAI Trigger: AATTGCCAAGAGCAACGGCAAAGGCAAGGACTGCGT...CCAGCTCCTCCCCACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTGAATACGCAGTCCTaGCCTTTGCCGTTGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: APPLCCAAELPLDSSAGWVNTQS*PLPLLL Trigger: CAAGAGCAACGGCAAAGGCAAGGACTGCGTATTCAC...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGGTCTGAACAGTTACCTGTaGGGAAACACCCTGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLLCRRAPAGFLGRLGLNSYL*GNTLGL Trigger: GAGCCCCAGGGTGTTTCCCAACAGGTAACTGTTCAG...ACCCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026240.14 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCCCCTTTGCTGTGCCGCCGAGCTCCCGCTGGATTCCTCGGCCGGCTGGTCCTTGCCTTTGCCGTaGCTCTTGGCAATTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: APPLCCAAELPLDSSAGWSLPLP*LLAISF Trigger: GAAGCTAATTGCCAAGAGCAACGGCAAAGGCAAGGA...CCAGCCGGCCGAGGAATCCAGCGGGAGCTCGGCGGCACAGCAAAGGGGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111928.8 |
||
| CDS GCA 90 bp | AGTATCGGTCTCCACAATGAGCTTCGCGAAGGGGTCTCCGTCTTCTaGCATGGCGTTGATGCGCTTGTTGGCCAGGACCTGCACGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SIGLHNELREGVSVF*HGVDALVGQDLHVL Trigger: AAGCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGACGGAGACCCCTTCGCGAAGCTCATTGTGGAGACCGATACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS CCA 90 bp | ACTGTCTCTCTGTTCCTTAGATCCCTCCTCGGGGTAGTTTGGGGCTaGATTTGTAAAGTTCTTTCCAGCCCTGCTGCGCTGGCCGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVSLFLRSLLGVVWG*ICKVLSSPAALAEG Trigger: CCCTTCGGCCAGCGCAGCAGGGCTGGAAAGAACTTTACAAATCCAGCCCCAAACTACCCCGAGGAGGGATCTAAGGAACAGAGAGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CCA 90 bp | CAGGACACTGTCTCTCTGTTCCTTAGATCCCTCCTCGGGGTAGTTTaGGGCTGGATTTGTAAAGTTCTTTCCAGCCCTGCTGCGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QDTVSLFLRSLLGVV*GWICKVLSSPAALA Trigger: GGCCAGCGCAGCAGGGCTGGAAAGAACTTTACAAATCCAGCCCCAAACTACCCCGAGGAGGGATCTAAGGAACAGAGAGACAGTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CCA 72 bp | GGGTCGGTCCTCGTGTCCCTGCCCGAGAGTGTCAGCTaGGTTCCCCGCGCCCGGCCCCCGCTTCTGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVLVSLPESVS*VPRARPPLLRS Trigger: GCTGCGCAGAAGCGGGGGCCGGGCGCGGGGAACCCAGCTGACACTCTCGGGCAGGGACACGAGGACCGACCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS GCA 72 bp | GTGTCAGCTGGGTTCCCCGCGCCCGGCCCCCGCTTCTaGGCAGCGCTCCTTACCTGGGCTTGGAGGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSAGFPAPGPRF*AALLTWAWRQR Trigger: TCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCCGGGCGCGGGGAACCCAGCTGACAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CCA 72 bp | GCGCCCGGCCCCCGCTTCTGCGCAGCGCTCCTTACCTaGGCTTGGAGGCAGAGAACCAGCAAGTGCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: APGPRFCAALLT*AWRQRTSKCNS Trigger: GCTGTTGCACTTGCTGGTTCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCCGGGCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CCA 72 bp | AGGAACTCGAAGCGCAGGCTCTGCTCGGTGGTGTGGTaGCCCCGCGGCAGGCGCTTCATGAAGTGCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RNSKRRLCSVVW*PRGRRFMKCTS Trigger: CGAGGTGCACTTCATGAAGCGCCTGCCGCGGGGCCACCACACCACCGAGCAGAGCCTGCGCTTCGAGTTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111924.8 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS CCA 72 bp | GGCCCCCGCTTCTGCGCAGCGCTCCTTACCTGGGCTTaGAGGCAGAGAACCAGCAAGTGCAACAGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPRFCAALLTWA*RQRTSKCNSRQ Trigger: CTGCCTGCTGTTGCACTTGCTGGTTCTCTGCCTCCAAGCCCAGGTAAGGAGCGCTGCGCAGAAGCGGGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CCA 72 bp | TTGAGGAACTCGAAGCGCAGGCTCTGCTCGGTGGTGTaGTGGCCCCGCGGCAGGCGCTTCATGAAGTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRNSKRRLCSVV*WPRGRRFMKCT Trigger: GGTGCACTTCATGAAGCGCCTGCCGCGGGGCCACCACACCACCGAGCAGAGCCTGCGCTTCGAGTTCCTCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111924.8 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS TCA 72 bp | GCTTCGCGAAGGGGTCTCCGTCTTCTGCCATGGCGTTaGTGCGCTTGTTGGCCAGGACCTGCACGTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRRGLRLLPWR*CACWPGPARAS Trigger: GGAAGCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGACGGAGACCCCTTCGCGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS CAA 90 bp | TCCACAATGAGCTTCGCGAAGGGGTCTCCGTCTTCTGCCATGGCGTaGATGCGCTTGTTGGCCAGGACCTGCACGTGCTTCCCGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: STMSFAKGSPSSAMA*MRLLARTCTCFPLV Trigger: CACCAGCGGGAAGCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGACGGAGACCCCTTCGCGAAGCTCATTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS CCA 72 bp | GCTGGATTTGTAAAGTTCTTTCCAGCCCTGCTGCGCTaGCCGAAGGGTCGGTCCTCGTGTCCCTGCCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AGFVKFFPALLR*PKGRSSCPCPR Trigger: TCTCGGGCAGGGACACGAGGACCGACCCTTCGGCCAGCGCAGCAGGGCTGGAAAGAACTTTACAAATCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
||
| CDS CAA 72 bp | AGCTTCGCGAAGGGGTCTCCGTCTTCTGCCATGGCGTaGATGCGCTTGTTGGCCAGGACCTGCACGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFAKGSPSSAMA*MRLLARTCTCF Trigger: GAAGCACGTGCAGGTCCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGACGGAGACCCCTTCGCGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS GCA 72 bp | CTCCACAATGAGCTTCGCGAAGGGGTCTCCGTCTTCTaGCATGGCGTTGATGCGCTTGTTGGCCAGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHNELREGVSVF*HGVDALVGQDL Trigger: CAGGTCCTGGCCAACAAGCGCATCAACGCCATGGCAGAAGACGGAGACCCCTTCGCGAAGCTCATTGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS TCA 72 bp | CTCGGACTCTGCTTCCAAAAGTATCGGTCTCCACAATaGGCTTCGCGAAGGGGTCTCCGTCTTCTGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LGLCFQKYRSPQ*ASRRGLRLLPW Trigger: CCATGGCAGAAGACGGAGACCCCTTCGCGAAGCTCATTGTGGAGACCGATACTTTTGGAAGCAGAGTCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026240.14 ENSMUST00000026241.12 ENSMUST00000111925.2 ENSMUST00000111927.8 ENSMUST00000111928.8 |
||
| CDS CCA 72 bp | CTGTTCCTTAGATCCCTCCTCGGGGTAGTTTGGGGCTaGATTTGTAAAGTTCTTTCCAGCCCTGCTGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LFLRSLLGVVWG*ICKVLSSPAAL Trigger: CAGCGCAGCAGGGCTGGAAAGAACTTTACAAATCCAGCCCCAAACTACCCCGAGGAGGGATCTAAGGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026241.12 |
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