Pregenerated sensors for FGF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027208Ensembl transcript IDs: ENSMUST00000064794.14, ENSMUST00000110442.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTaGTCATCTGACAAAGCATCCCAGCAGCCTTTAGGTCTGACATAC | + |
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Preference number: 1 (lower is better) Translates to: ESFQTLLIVCSLCGA*SSDKASQQPLGLTY Trigger: GTATGTCAGACCTAAAGGCTGCTGGGATGCTTTGTCAGATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR GCA 90 bp | TTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTaGTCATCGTCTGTAGTTTGTGTGGGGCTTGATCATCTGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: FIFPDYSSHWKAFKH*SSSVVCVGLDHLTK Trigger: CTTTGTCAGATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCAGCCAGCATGTTCCAAGCCTGTaGTTTTGTAAAACCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: CASHGVSHQGRGHLHCSQHVPSL*FCKTTC Trigger: ACAGGTGGTTTTACAAAATCACAGGCTTGGAACATG...CTGGCTGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCAAATCTCCCTGCTGAATaGAACTGGTTTCTCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: CCVLVMVSATRGGDICTANLPAE*NWFLKY Trigger: GTATTTGAGAAACCAGTTTCATTCAGCAGGGAGATT...TGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR TCA 90 bp | TTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTATGGGGCTTGATCATCTaGCAAAGCATCCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FPDYSSHWKAFKHCSSSVWGLII*QSIPAA Trigger: GGCTGCTGGGATGCTTTGTCAGATGATCAAGCCCCA...TACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATTTTTCCAGCCTTTCTTaGTTACTGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HWKAFKHCSSSVVCVGLDFSSLS*LLRERE Trigger: CTCTCTCTCTCTCAGTAACCAAGAAAGGCTGGAAAA...ATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATAAGAAATCTCCCTGCTaGATGAAACTGGTTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HWKAFKHCSSSVVCVGLDKKSPC*MKLVSQ Trigger: TTGAGAAACCAGTTTCATTCAGCAGGGAGATTTCTT...ATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCATAAATTTATGTCAGCATCCATCTACTGGTTGCAGAACTATGGAGTAAGTTGGGGCTTGATCATCTaGCAAAGCATCCCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: IHKFMSASIYWLQNYGVSWGLII*QSIPAA Trigger: GGCTGCTGGGATGCTTTGTCAGATGATCAAGCCCCA...ACTTACTCCATAGTTCTGCAACCAGTAGATGGATGCTGACATAAATTTATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR TCA 90 bp | AACCTCTATTGGAGTTTCACTCTTGCCATTTCAATGTTGGCATATCTTGTATGGGCCTTTCTTGGTTACTaGGAGAGAGAGAGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NLYWSFTLAISMLAYLVWAFLGY*ERERER Trigger: TCTCTCTCTCTCTCTCTCTCAGTAACCAAGAAAGGC...CCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTTTTTCCAGCCTTTCTTaGTTACTGAGAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VSTGMFQACDFVKPPVDSFSSLS*LLRERE Trigger: CTCTCTCTCTCTCAGTAACCAAGAAAGGCTGGAAAA...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATAGTTTGTGTGGGGCTTaGTCATCTGACAAAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: HSFFRIIVLTGKLSNTAHSLCGA*SSDKAS Trigger: GGATGCTTTGTCAGATGATCAAGCCCCACACAAACT...ATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATAATCTCCCTGCTGAATaGAACTGGTTTCTCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: LVSTGMFQACDFVKPPVDNLPAE*NWFLKY Trigger: GTATTTGAGAAACCAGTTTCATTCAGCAGGGAGATT...ATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTGCCCTTCCCTTCATAAGTACTTATTCATAAATTTATGTCAGCATCCATCTAGTTTGTGTGGGGCTTaGTCATCTGACAAAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: CCPSLHKYLFINLCQHPSSLCGA*SSDKAS Trigger: GGATGCTTTGTCAGATGATCAAGCCCCACACAAACT...AGATGGATGCTGACATAAATTTATGAATAAGTACTTATGAAGGGAAGGGCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR TCA 90 bp | AACCTCTATTGGAGTTTCACTCTTGCCATTTCAATGTTGGCATATCTTGTATGGAAGAAATCTCCCTGCTaGATGAAACTGGTTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: NLYWSFTLAISMLAYLVWKKSPC*MKLVSQ Trigger: TTGAGAAACCAGTTTCATTCAGCAGGGAGATTTCTT...CCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR CCA 90 bp | TTAGTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATGATTATAGTTCTCACTaGAAAGCTTTCAAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: LVSTGMFQACDFVKPPVDDYSSH*KAFKHC Trigger: GCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATC...ATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR CAA 90 bp | GCTGACTACAACCTCTATTGGAGTTTCACTCTTGCCATTTCAATGTaGGCATATCTTGTATGGCAAAAACTTCTAAAGACATCAAATTGC | + |
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Preference number: 2 (lower is better) Translates to: ADYNLYWSFTLAISM*AYLVWQKLLKTSNC Trigger: GCAATTTGATGTCTTTAGAAGTTTTTGCCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTTGTAGTCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR CCA 90 bp | CTCTATTGGAGTTTCACTCTTGCCATTTCAATGTTGGCATATCTTGTATGGCAAGATTATAGTTCTCACTaGAAAGCTTTCAAACACTGC | + |
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Preference number: 2 (lower is better) Translates to: LYWSFTLAISMLAYLVWQDYSSH*KAFKHC Trigger: GCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATC...TTGCCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR GCA 72 bp | CTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTaGACTGCAGCCAGTCGGGTTTGTTGCTCCCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LVMVSATRGGDI*TAASRVCCSLE Trigger: TTCAAGGGAGCAACAAACCCGACTGGCTGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACGTTTTCCAGCCTTTCTaGGTTACTGAGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QVLCASHGVSHQGRGHLHVFQPF*VTERER Trigger: TCTCTCTCTCTCAGTAACCAAGAAAGGCTGGAAAAC...GTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| 3UTR TCA 72 bp | CAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTaGTCATCTGACAAAGCATCCCAGCAGCCTTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: QTLLIVCSLCGA*SSDKASQQPLG Trigger: ACCTAAAGGCTGCTGGGATGCTTTGTCAGATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR GCA 72 bp | CCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTaGTCATCGTCTGTAGTTTGTGTGGGGCTTGATCAT | + |
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Preference number: 3 (lower is better) Translates to: PDYSSHWKAFKH*SSSVVCVGLDH Trigger: ATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTGTTTTCCAGCCTTTCTaGGTTACTGAGAGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VSTGMFQACDFVKPPVDSVFQPF*VTERER Trigger: TCTCTCTCTCTCAGTAACCAAGAAAGGCTGGAAAAC...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR TCA 72 bp | GTTCATATTAGTCAGTACAGGCATGTTCCAAGCCTGTaGTTTTGTAAAACCACCTGTAGATTCTATTCTATA | + |
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Preference number: 3 (lower is better) Translates to: VHISQYRHVPSL*FCKTTCRFYSI Trigger: TATAGAATAGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGACTAATATGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACATCCTCAGGTACCACTaGGTGCGACAGAACAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVLCASHGVSHQGRGHLHILRYH*VRQNSL Trigger: AAGACTGTTCTGTCGCACCCAGTGGTACCTGAGGAT...GTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CCA 90 bp | TGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCATCTGTAGAGCAGAGTTaGCAGGATCCGTGTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: CCVLVMVSATRGGDICTASVEQS*QDPCQY Trigger: ATACTGACACGGATCCTGCCAACTCTGCTCTACAGA...TGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR TCA 90 bp | CACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATGACGAGGTGGAAGCATaGTCTGTAGAGCAGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HWKAFKHCSSSVVCVGLDDEVEA*SVEQSW Trigger: CCAACTCTGCTCTACAGATCATGCTTCCACCTCGTC...ATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR GCA 90 bp | TGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCAAGTTGCAATCCTCATTaGATTCTTTCTTTGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CCVLVMVSATRGGDICTASCNPH*ILSLHR Trigger: TCTATGCAAAGAAAGAATGCAATGAGGATTGCAACT...TGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR TCA 90 bp | TTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGACGAGGTGGAAGCATaGTCTGTAGAGCAGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FPDYSSHWKAFKHCSSSVDEVEA*SVEQSW Trigger: CCAACTCTGCTCTACAGATCATGCTTCCACCTCGTC...TACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR GCA 90 bp | TTAGTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCAGGTACCACTGGGTaGGACAGAACAGTCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LVSTGMFQACDFVKPPVDSGTTG*DRTVFS Trigger: TGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGA...ATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR GCA 90 bp | TTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTATCAGGTACCACTGGGTaGGACAGAACAGTCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FPDYSSHWKAFKHCSSSVSGTTG*DRTVFS Trigger: TGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGA...TACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CCA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTTCTGTAGAGCAGAGTTaGCAGGATCCGTGTCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: VSTGMFQACDFVKPPVDSSVEQS*QDPCQY Trigger: ATACTGACACGGATCCTGCCAACTCTGCTCTACAGA...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR TCA 90 bp | TGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATCATCCAGAATCAGTTCTTTaGAGTTGCAATCCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: WKAFKHCSSSVVCVGLDHPESVL*SCNPHC Trigger: GCAATGAGGATTGCAACTTCAAAGAACTGATTCTGG...ATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CCA 90 bp | CATTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATTGTAGTCATAACTTCTaGTGTGTCGCTCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HSFFRIIVLTGKLSNTAHCSHNF*CVARGW Trigger: CCAGCCCCGAGCGACACACCAGAAGTTATGACTACA...ATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR TCA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTCCAGAATCAGTTCTTTaGAGTTGCAATCCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: VSTGMFQACDFVKPPVDSPESVL*SCNPHC Trigger: GCAATGAGGATTGCAACTTCAAAGAACTGATTCTGG...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CCA 90 bp | ATTCATAAATTTATGTCAGCATCCATCTACTGGTTGCAGAACTATGGAGTAAGTTGTAGTCATAACTTCTaGTGTGTCGCTCGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IHKFMSASIYWLQNYGVSCSHNF*CVARGW Trigger: CCAGCCCCGAGCGACACACCAGAAGTTATGACTACA...ACTTACTCCATAGTTCTGCAACCAGTAGATGGATGCTGACATAAATTTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CCA 90 bp | CACTGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATTCCCTTCCTTGTTCATaGCAAGATAGTATTCACTTT | + |
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Preference number: 4 (lower is better) Translates to: HWKAFKHCSSSVVCVGLDSLPCS*QDSIHF Trigger: AAAGTGAATACTATCTTGCCATGAACAAGGAAGGGA...ATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR CAA 72 bp | TCAAGGCTGACTACAACCTCTATTGGAGTTTCACTCTaGCCATTTCAATGTTGGCATATCTTGTATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SRLTTTSIGVSL*PFQCWHILYGK Trigger: TTTGCCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTTGTAGTCAGCCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR GCA 90 bp | CATTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATAGTTGCAATCCTCATTaGATTCTTTCTTTGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: HSFFRIIVLTGKLSNTAHSCNPH*ILSLHR Trigger: TCTATGCAAAGAAAGAATGCAATGAGGATTGCAACT...ATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| 3UTR CAA 72 bp | AACCTCTATTGGAGTTTCACTCTTGCCATTTCAATGTaGGCATATCTTGTATGGCAAAAACTTCTAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: NLYWSFTLAISM*AYLVWQKLLKT Trigger: TGTCTTTAGAAGTTTTTGCCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CAA 90 bp | TGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCAGCCAGATCTGTAGAGCAGAGTaGGCAGGATCCGTGTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: CASHGVSHQGRGHLHCSQICRAE*AGSVSV Trigger: TACTGACACGGATCCTGCCAACTCTGCTCTACAGAT...CTGGCTGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CAA 90 bp | TGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCAGCCAGTTCACTTTGCCTCGTTaGTCAATCCTCAGGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: CASHGVSHQGRGHLHCSQFTLPR*SILRYH Trigger: GTGGTACCTGAGGATTGACAAACGAGGCAAAGTGAA...CTGGCTGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS GCA 90 bp | CTGGTGTGTCGCTCGGGGCTGGAACAGTTCACACTCGTAGCCGTTTaGTCCGGACTCATGTCATTGCAAGCTAGAGATATAGTGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: LVCRSGLEQFTLVAV*SGLMSLQARDIVPT Trigger: AGTGGGCACTATATCTCTAGCTTGCAATGACATGAGTCCGGAGCAAACGGCTACGAGTGTGAACTGTTCCAGCCCCGAGCGACACACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS CCA 90 bp | TGGGTCCCTTTCACTTTGCCTCGTTTGTCAATCCTCAGGTACCACTaGGTGCGACAGAACAGTCTTCTCACCCTTATATCCCCTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: WVPFTLPRLSILRYH*VRQNSLLTLISPPS Trigger: GGAAGGAGGGGATATAAGGGTGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGAGGATTGACAAACGAGGCAAAGTGAAAGGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS GCA 90 bp | TCCCTTTCACTTTGCCTCGTTTGTCAATCCTCAGGTACCACTGGGTaGGACAGAACAGTCTTCTCACCCTTATATCCCCTCCTTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: SLSLCLVCQSSGTTG*DRTVFSPLYPLLPC Trigger: ACATGGAAGGAGGGGATATAAGGGTGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGAGGATTGACAAACGAGGCAAAGTGAAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | TGTTGTGTGCTAGTCATGGTGTCAGCCACCAGGGGAGGGGACATCTGCACTGCATCCAGAATCAGTTCTTaGAAGTTGCAATCCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: CCVLVMVSATRGGDICTASRISS*KLQSSL Trigger: CAATGAGGATTGCAACTTCAAAGAACTGATTCTGGA...TGCAGTGCAGATGTCCCCTCCCCTGGTGGCTGACACCATGACTAGCACACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CAA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTTGGGTCCCTTTCACTTaGCCTCGTTTGTCAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSTGMFQACDFVKPPVDSWVPFT*PRLSIL Trigger: GAGGATTGACAAACGAGGCAAAGTGAAAGGGACCCA...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | TTAGTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATATCTGTAGAGCAGAGTaGGCAGGATCCGTGTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LVSTGMFQACDFVKPPVDICRAE*AGSVSV Trigger: TACTGACACGGATCCTGCCAACTCTGCTCTACAGAT...ATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | AACCTCTATTGGAGTTTCACTCTTGCCATTTCAATGTTGGCATATCTTGTATGGTGGGTCCCTTTCACTTaGCCTCGTTTGTCAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: NLYWSFTLAISMLAYLVWWVPFT*PRLSIL Trigger: GAGGATTGACAAACGAGGCAAAGTGAAAGGGACCCA...CCATACAAGATATGCCAACATTGAAATGGCAAGAGTGAAACTCCAATAGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CAA 90 bp | TGGAAAGCTTTCAAACACTGCTCATCGTCTGTAGTTTGTGTGGGGCTTGATCATCATTGCATTCTTTCTTaGCATAGAGTTTCCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: WKAFKHCSSSVVCVGLDHHCILS*HRVSLP Trigger: AGGAAGGGAAACTCTATGCAAAGAAAGAATGCAATG...ATGATCAAGCCCCACACAAACTACAGACGATGAGCAGTGTTTGAAAGCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTACAGGCATGTTCCAAGCCTGTGATTTTGTAAAACCACCTGTAGATTCTTCCAGAATCAGTTCTTaGAAGTTGCAATCCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: VSTGMFQACDFVKPPVDSSRISS*KLQSSL Trigger: CAATGAGGATTGCAACTTCAAAGAACTGATTCTGGA...AGAATCTACAGGTGGTTTTACAAAATCACAGGCTTGGAACATGCCTGTACTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | CATTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATTCCGGACTCATGTCATaGCAAGCTAGAGATATAGTG | + |
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Preference number: 5 (lower is better) Translates to: HSFFRIIVLTGKLSNTAHSGLMS*QARDIV Trigger: CACTATATCTCTAGCTTGCAATGACATGAGTCCGGA...ATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS-3UTR CAA 90 bp | TGTTGCCCTTCCCTTCATAAGTACTTATTCATAAATTTATGTCAGCATCCATCTTCCGGACTCATGTCATaGCAAGCTAGAGATATAGTG | + |
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Preference number: 5 (lower is better) Translates to: CCPSLHKYLFINLCQHPSSGLMS*QARDIV Trigger: CACTATATCTCTAGCTTGCAATGACATGAGTCCGGA...AGATGGATGCTGACATAAATTTATGAATAAGTACTTATGAAGGGAAGGGCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064794.14 |
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| CDS-3UTR CAA 90 bp | CATTCATTTTTCCGGATTATAGTTCTCACTGGAAAGCTTTCAAACACTGCTCATCATTGCATTCTTTCTTaGCATAGAGTTTCCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HSFFRIIVLTGKLSNTAHHCILS*HRVSLP Trigger: AGGAAGGGAAACTCTATGCAAAGAAAGAATGCAATG...ATGAGCAGTGTTTGAAAGCTTTCCAGTGAGAACTATAATCCGGAAAAATGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS GCA 72 bp | CGCTCGGGGCTGGAACAGTTCACACTCGTAGCCGTTTaGTCCGGACTCATGTCATTGCAAGCTAGAGATATA | + |
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Preference number: 6 (lower is better) Translates to: RSGLEQFTLVAV*SGLMSLQARDI Trigger: TATATCTCTAGCTTGCAATGACATGAGTCCGGAGCAAACGGCTACGAGTGTGAACTGTTCCAGCCCCGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS CAA 90 bp | CTGGAACAGTTCACACTCGTAGCCGTTTGCTCCGGACTCATGTCATaGCAAGCTAGAGATATAGTGCCCACTAGACAGACGAGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LEQFTLVAVCSGLMS*QARDIVPTRQTRWK Trigger: CTTCCACCTCGTCTGTCTAGTGGGCACTATATCTCTAGCTTGCAATGACATGAGTCCGGAGCAAACGGCTACGAGTGTGAACTGTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS GCA 72 bp | CTTTGCCTCGTTTGTCAATCCTCAGGTACCACTGGGTaGGACAGAACAGTCTTCTCACCCTTATATCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LCLVCQSSGTTG*DRTVFSPLYPL Trigger: GAGGGGATATAAGGGTGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGAGGATTGACAAACGAGGCAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS GCA 72 bp | TGTAGCTGTTCTTCATCTCCTGGGTCCCTTTCACTTTaGCTCGTTTGTCAATCCTCAGGTACCACTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CSCSSSPGSLSL*LVCQSSGTTGC Trigger: GCACCCAGTGGTACCTGAGGATTGACAAACGAGGCAAAGTGAAAGGGACCCAGGAGATGAAGAACAGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS CAA 72 bp | TTCACACTCGTAGCCGTTTGCTCCGGACTCATGTCATaGCAAGCTAGAGATATAGTGCCCACTAGACAGACG | + |
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Preference number: 6 (lower is better) Translates to: FTLVAVCSGLMS*QARDIVPTRQT Trigger: CGTCTGTCTAGTGGGCACTATATCTCTAGCTTGCAATGACATGAGTCCGGAGCAAACGGCTACGAGTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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| CDS CCA 72 bp | TTCACTTTGCCTCGTTTGTCAATCCTCAGGTACCACTaGGTGCGACAGAACAGTCTTCTCACCCTTATATCC | + |
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Preference number: 6 (lower is better) Translates to: FTLPRLSILRYH*VRQNSLLTLIS Trigger: GGATATAAGGGTGAGAAGACTGTTCTGTCGCACCCAGTGGTACCTGAGGATTGACAAACGAGGCAAAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064794.14 ENSMUST00000110442.2 |
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