Pregenerated sensors for FGF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029337Ensembl transcript IDs: ENSMUST00000031280.2, ENSMUST00000200059.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGAAAGTTCCGGTTGCTCGGACTGCTTGAACCTGGGTAGGAAGTaGGTGGAGACGTGTTGGGGTTTGACCCGTGGGCTGCAGCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: KESSGCSDCLNLGRK*VETCWGLTRGLQPL Trigger: GAGAGGCTGCAGCCCACGGGTCAAACCCCAACACGTCTCCACCCACTTCCTACCCAGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR TCA 90 bp | GCACAGCAGAGGGATGCTGTATCCGAGTTTCCTTCAGGGCTCCGATaGCGCCTGTATAGAGAGTTGTTTCCCACAAGGCCAGGATGGACG | + |
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Preference number: 1 (lower is better) Translates to: AQQRDAVSEFPSGLR*RLYRELFPTRPGWT Trigger: CGTCCATCCTGGCCTTGTGGGAAACAACTCTCTATACAGGCGTCATCGGAGCCCTGAAGGAAACTCGGATACAGCATCCCTCTGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR CCA 90 bp | ACACACACACACACACACACACACACCCTGATTAGTTACTCCCTGTaGGTCCATACAGTAAGGATAACAGGGAGTTATAGAAGTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: THTHTHTHTLISYSL*VHTVRITGSYRSIF Trigger: AAAAATACTTCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGAGTAACTAATCAGGGTGTGTGTGTGTGTGTGTGTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR CAA 90 bp | TGGGTGGAGACGTGTTGGGGTTTGACCCGTGGGCTGCAGCCTCTCTaGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WVETCWGLTRGLQPL*AFPLLFRATYHSRP Trigger: AGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCCACGGGTCAAACCCCAACACGTCTCCACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR-3UTR TCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACTCAGCTGGTCTTGAATaGGGGCAGGGGGCAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHSAGLE*GQGADK Trigger: TTTATCTGCCCCCTGCCCTCATTCAAGACCAGCTGA...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR TCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACATATCCTCGGTGATCTaGAGAGATGAGCTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHISSVI*RDELPG Trigger: TCCAGGGAGCTCATCTCTTCAGATCACCGAGGATAT...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACACACACACACACATATTTTCCTCCTTCTaGTCATTGAGCCCAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: WLVIHLLQLHTHTHTHTHIFSSF*SLSPAT Trigger: AGTGGCTGGGCTCAATGATCAGAAGGAGGAAAATAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTGACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACCCTCCTTCTGATCATTaGGCCCAGCCACTAATATGG | + |
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Preference number: 2 (lower is better) Translates to: RLDMKTWLVIHLLQLHTHPPSDH*AQPLIW Trigger: CCATATTAGTGGCTGGGCTCAATGATCAGAAGGAGG...GTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTCAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGTGCACACCTCCAAGCTaGGCCTTTTGGGGCTTCGAA | + |
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Preference number: 2 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRCTPPS*AFWGFE Trigger: TTCGAAGCCCCAAAAGGCTCAGCTTGGAGGTGTGCA...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTTGACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACGCTATCAAACTGGTCTaGAAACGCAGAATGCTAACC | + |
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Preference number: 2 (lower is better) Translates to: RLDMKTWLVIHLLQLHTHAIKLV*KRRMLT Trigger: GGTTAGCATTCTGCGTTTTCAGACCAGTTTGATAGC...GTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTCAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTGGGTCCATACAGTAAGGATAACAGGGAGTTATAGAAGTATTTTTAAGACACTTAGTGTGCGGTaGCCTCTGTCCTTTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SLWVHTVRITGSYRSIFKTLSVR*PLSFSL Trigger: TAAAGAAAAGGACAGAGGCCACCGCACACTAAGTGT...CTTAAAAATACTTCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR CCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACATTAGTTACTCCCTGTaGGTCCATACAGTAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHISYSL*VHTVRI Trigger: TATCCTTACTGTATGGACCCACAGGGAGTAACTAAT...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR GCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACCAGTTTCCTAGTGTATaGTTGGTGGACAGAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHQFPSV*LVDRIK Trigger: TTTTATTCTGTCCACCAAGCATACACTAGGAAACTG...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR TCA 72 bp | ACCTGGGTAGGAAGTGGGTGGAGACGTGTTGGGGTTTaGCCCGTGGGCTGCAGCCTCTCTTGGCTTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: TWVGSGWRRVGV*PVGCSLSWLSL Trigger: GAGGGAAAGCCAAGAGAGGCTGCAGCCCACGGGTCAAACCCCAACACGTCTCCACCCACTTCCTACCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR CCA 72 bp | TCCGGTTGCTCGGACTGCTTGAACCTGGGTAGGAAGTaGGTGGAGACGTGTTGGGGTTTGACCCGTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGCSDCLNLGRK*VETCWGLTRGL Trigger: CAGCCCACGGGTCAAACCCCAACACGTCTCCACCCACTTCCTACCCAGGTTCAAGCAGTCCGAGCAACCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR GCA 72 bp | GACCTGACTTCCACACGTGTAGGCACAGCAGAGGGATaGTGTATCCGAGTTTCCTTCAGGGCTCCGATGACG | + |
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Preference number: 3 (lower is better) Translates to: DLTSTRVGTAEG*CIRVSFRAPMT Trigger: CGTCATCGGAGCCCTGAAGGAAACTCGGATACAGCATCCCTCTGCTGTGCCTACACGTGTGGAAGTCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR GCA 72 bp | ACAGTGACGGTGAAGGAAAGTTCCGGTTGCTCGGACTaGTTGAACCTGGGTAGGAAGTGGGTGGAGACGTGT | + |
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Preference number: 3 (lower is better) Translates to: TVTVKESSGCSD*LNLGRKWVETC Trigger: ACACGTCTCCACCCACTTCCTACCCAGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTTCACCGTCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR TCA 72 bp | AGGGATGCTGTATCCGAGTTTCCTTCAGGGCTCCGATaGCGCCTGTATAGAGAGTTGTTTCCCACAAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RDAVSEFPSGLR*RLYRELFPTRP Trigger: TGGCCTTGTGGGAAACAACTCTCTATACAGGCGTCATCGGAGCCCTGAAGGAAACTCGGATACAGCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR GCA 72 bp | TTTTCTGGAACAGTGACGGTGAAGGAAAGTTCCGGTTaGTCGGACTGCTTGAACCTGGGTAGGAAGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: FSGTVTVKESSG*SDCLNLGRKWV Trigger: CACCCACTTCCTACCCAGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTTCACCGTCACTGTTCCAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTTTGACCCGTGGGCTGCAGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCATTATAGCTGTTTTCTaGGAATCTCTCCCTGAACTT | + |
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Preference number: 3 (lower is better) Translates to: GFDPWAAASLGFPSLVQGIIAVF*ESLPEL Trigger: AAGTTCAGGGAGAGATTCCAAGAAAACAGCTATAAT...GCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCCACGGGTCAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR TCA 72 bp | AGAAAGCAGTTTAGTTCCAGTCAAAGCGAAACAAAATaGCCTGACTTCCACACGTGTAGGCACAGCAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RKQFSSSQSETK*PDFHTCRHSRG Trigger: CCCTCTGCTGTGCCTACACGTGTGGAAGTCAGGTCATTTTGTTTCGCTTTGACTGGAACTAAACTGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR TCA 72 bp | TCCTCAAATCACGAAGCCTTTATATCCTCGGTGATCTaGAGAGATGAGCTCCCTGGATCGCTACAGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: SSNHEAFISSVI*RDELPGSLQRI Trigger: GATTCTCTGTAGCGATCCAGGGAGCTCATCTCTTCAGATCACCGAGGATATAAAGGCTTCGTGATTTGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR TCA 72 bp | AACCATCCTCAAATCACGAAGCCTTTATATCCTCGGTaGTCTGAAGAGATGAGCTCCCTGGATCGCTACAGA | + |
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Preference number: 3 (lower is better) Translates to: NHPQITKPLYPR*SEEMSSLDRYR Trigger: TCTGTAGCGATCCAGGGAGCTCATCTCTTCAGATCACCGAGGATATAAAGGCTTCGTGATTTGAGGATGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR GCA 72 bp | AAGAAGCAAAAGACAGAGTTAAATCTCTGTGGACGCTaGACACTTAGTGTGCGGTGGCCTCTGTCCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KKQKTELNLCGR*TLSVRWPLSFS Trigger: AGAAAAGGACAGAGGCCACCGCACACTAAGTGTGCAGCGTCCACAGAGATTTAACTCTGTCTTTTGCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR CCA 72 bp | CACACACACACACACACCCTGATTAGTTACTCCCTGTaGGTCCATACAGTAAGGATAACAGGGAGTTATAGA | + |
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Preference number: 3 (lower is better) Translates to: HTHTHTLISYSL*VHTVRITGSYR Trigger: TCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGAGTAACTAATCAGGGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR CCA 72 bp | TTAAATCTCTGTGGACGCTGCACACTTAGTGTGCGGTaGCCTCTGTCCTTTTCTTTACATAAAGCCTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: LNLCGRCTLSVR*PLSFSLHKAFK Trigger: TTTAAAGGCTTTATGTAAAGAAAAGGACAGAGGCCACCGCACACTAAGTGTGCAGCGTCCACAGAGATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR-3UTR CAA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACTTTCCTAGTGTATGCTaGGTGGACAGAATAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHFPSVC*VDRIKL Trigger: AAGTTTTATTCTGTCCACCAAGCATACACTAGGAAA...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCAGACGCTTCTCCCCGTaGGCCCAAGCGCTGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: GCSLSWLSLSCSGPRTTLRRFSP*AQALWI Trigger: GATCCACAGCGCTTGGGCTCACGGGGAGAAGCGTCT...GAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | CTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCTGTCTTACTTCTGCCCCGGCTaGCGCTGGAGTCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSWLSLSCSGPRTTLGLSYFCPG*RWSLPG Trigger: ACCCGGGAGACTCCAGCGGCAGCCGGGGCAGAAGTA...AGACAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCTGAGCCGCTTCCTTGGCTaGCCGGAGAAGCTGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: SLSWLSLSCSGPRTTLGLSRFLG*PEKLRL Trigger: CAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCT...CAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | TCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCTGTCTTTTCAGTTCTGTCTCTGCAGTACAGGCTaGCGGTCCGGCGCCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SLSCSGPRTTLGLSFQFCLCSTG*RSGAPK Trigger: CTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAG...ACAGAACTGAAAAGACAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | CCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCTGTCAACCGATGCCCACTCTaGAGTACAGGCTGCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLLAFPLLFRATYHSRPVNRCPL*STGCRS Trigger: GGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTT...GACAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| 3UTR CAA 72 bp | ACCCGTGGGCTGCAGCCTCTCTTGGCTTTCCCTCTCTaGTTCAGGGCCACGTACCACTCTCGGCCTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TRGLQPLLAFPL*FRATYHSRPVF Trigger: AAAGACAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCCACGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR TCA 90 bp | GTGGGCTGCAGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTGGTGGCTGCAGAAGATaGGGAAGAGCAAGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VGCSLSWLSLSCSGPRTTGGCRR*GRARTG Trigger: GCCTGTCCTTGCTCTTCCTCATCTTCTGCAGCCACC...AGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGCAGATGGAAACCGATaGCCACTCTGCAGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GCSLSWLSLSCSGPRTTLADGNR*PLCSTG Trigger: GCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGC...GAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR CCA 90 bp | GTGGGCTGCAGCCTCTCTTGGCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTGCGCTGTGGATCAGGTaGCTGCAGAAGATGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VGCSLSWLSLSCSGPRTTALWIR*LQKMRK Trigger: CTTCCTCATCTTCTGCAGCCACCTGATCCACAGCGC...AGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR CCA 90 bp | CCACTCTCGGCCTGTCTTTTCAGTTCTGTGGATCGCGGACGCATAGGTATTATATCCGAGCCGCTTCCTTaGCTGCCCGGAGAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PLSACLFSSVDRGRIGIISEPLP*LPGEAA Trigger: CGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGA...TATAATACCTATGCGTCCGCGATCCACAGAACTGAAAAGACAGGCCGAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | TGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACACACACACACACCTGGGCTGGGACTTCTaGGAGGCTGCGACAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLVIHLLQLHTHTHTHTHLGWDF*EAATGA Trigger: TGCCCCTGTCGCAGCCTCGCAGAAGTCCCAGCCCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACCTCTGCAGTACAGGCTaGCGGTCCGGCGCCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHLCSTG*RSGAPK Trigger: CTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAG...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | GGAACAGTGACGGTGAAGGAAAGTTCCGGTTGCTCGGACTGCTTGAACCTGGGTAACACACTGGCTTCGTaGGAGCCATTGACTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GTVTVKESSGCSDCLNLGNTLAS*EPLTLP Trigger: TGGCAAAGTCAATGGCTCCCACGAAGCCAGTGTGTT...ACCCAGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTTCACCGTCACTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS-3UTR GCA 90 bp | TGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACACACACACACACAACCGATGCCCACTCTaGAGTACAGGCTGCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: WLVIHLLQLHTHTHTHTHNRCPL*STGCRS Trigger: GGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACTCCGAGCCGCTTCCTTaGCTGCCCGGAGAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHSEPLP*LPGEAA Trigger: CGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGA...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR TCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACGGTGGCTGCAGAAGATaGGGAAGAGCAAGGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHGGCRR*GRARTG Trigger: GCCTGTCCTTGCTCTTCCTCATCTTCTGCAGCCACC...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGTGGGTCCATACAGTAAGGATAACAGGGAGTTATAGAAGTATTTTTAAGAGACGCTTCTCCCCGTaGGCCCAAGCGCTGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SLWVHTVRITGSYRSIFKRRFSP*AQALWI Trigger: GATCCACAGCGCTTGGGCTCACGGGGAGAAGCGTCT...CTTAAAAATACTTCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR TCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACCTTCGTGGGAGCCATTaGCTTTGCCATCCGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHLRGSH*LCHPGR Trigger: TCTACCCGGATGGCAAAGTCAATGGCTCCCACGAAG...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGTACTTCTGCCCCGGCTaGCGCTGGAGTCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRYFCPG*RWSLPG Trigger: ACCCGGGAGACTCCAGCGGCAGCCGGGGCAGAAGTA...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACAACCTGGGTAGGAAGTaGGTGGAGACGTGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHNLGRK*VETCWG Trigger: ACCCCAACACGTCTCCACCCACTTCCTACCCAGGTT...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGAGCCGCTTCCTTGGCTaGCCGGAGAAGCTGCGACTG | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRSRFLG*PEKLRL Trigger: CAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCT...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | AGACTTGACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACGCAGATGGAAACCGATaGCCACTCTGCAGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RLDMKTWLVIHLLQLHTHADGNR*PLCSTG Trigger: GCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGC...GTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTCAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGGGACTTCTGCGAGGCTaGGACAGGGGCACCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRGLLRG*DRGTFG Trigger: ACCAAAGGTGCCCCTGTCGCAGCCTCGCAGAAGTCC...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGTGGGTCCATACAGTAAGGATAACAGGGAGTTATAGAAGTATTTTTAAGCCCGAAGGGCTCCACTaGAAACTGCTATGTTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SLWVHTVRITGSYRSIFKPEGLH*KLLCSE Trigger: CTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGG...CTTAAAAATACTTCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR GCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGGGCTCCACTGGAAACTaGTATGTTCCGAGCCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRGSTGN*YVPSRF Trigger: GAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCC...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGGCGCTGTGGATCAGGTaGCTGCAGAAGATGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRALWIR*LQKMRK Trigger: CTTCCTCATCTTCTGCAGCCACCTGATCCACAGCGC...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGTGGGTCCATACAGTAAGGATAACAGGGAGTTATAGAAGTATTTTTAAGAACACACTGGCTTCGTaGGAGCCATTGACTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLWVHTVRITGSYRSIFKNTLAS*EPLTLP Trigger: TGGCAAAGTCAATGGCTCCCACGAAGCCAGTGTGTT...CTTAAAAATACTTCTATAACTCCCTGTTATCCTTACTGTATGGACCCACAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| 3UTR CAA 72 bp | CCGTCTGTGGTTTCTGTTGAGGGTTTGGAATTTGGGTaGAGAATGAAGTGTCATTTTCAGCTCATCACATTC | + |
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Preference number: 4 (lower is better) Translates to: PSVVSVEGLEFG*RMKCHFQLITF Trigger: GAATGTGATGAGCTGAAAATGACACTTCATTCTCAACCCAAATTCCAAACCCTCAACAGAAACCACAGACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGGGCTGCAGCCTCTCTTaGCTTTCCCTCTCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRGCSLS*LSLSCS Trigger: TGAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCC...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACTGGCTTTTTCTTTTCTaGAACAGTGACGGTGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHWLFLF*NSDGEG Trigger: TCCTTCACCGTCACTGTTCCAGAAAAGAAAAAGCCA...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CCA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGCTTTGGTTTCACCGGTaGCTTTTTCTTTTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRLWFHR*LFLFWN Trigger: GTTCCAGAAAAGAAAAAGCCACCGGTGAAACCAAAG...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS GCA 90 bp | AGTACAGGCTGCCGGTCCGGCGCCCCGAAGGGCTCCACTGGAAACTaGTATGTTCCGAGCCGCTTCCTTGGCTGCCCGGAGAAGCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: STGCRSGAPKGSTGN*YVPSRFLGCPEKLR Trigger: TCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCAGCCTGTACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS CCA 90 bp | ACTCTGCAGTACAGGCTGCCGGTCCGGCGCCCCGAAGGGCTCCACTaGAAACTGCTATGTTCCGAGCCGCTTCCTTGGCTGCCCGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: TLQYRLPVRRPEGLH*KLLCSEPLPWLPGE Trigger: TTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS TCA 90 bp | CTAGGAGGCGCGGGTTGCCCTTCGGGAGTGAGACGCTTCTCCCCGTaGGCCCAAGCGCTGTGGATCAGGTGGCTGCAGAAGATGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LGGAGCPSGVRRFSP*AQALWIRWLQKMRK Trigger: CTTCCTCATCTTCTGCAGCCACCTGATCCACAGCGCTTGGGCTCACGGGGAGAAGCGTCTCACTCCCGAAGGGCAACCCGCGCCTCCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 90 bp | CTTTGCCATCCGGGTAGATCTGCAGATGGAAACCGATGCCCACTCTaGAGTACAGGCTGCCGGTCCGGCGCCCCGAAGGGCTCCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: LCHPGRSADGNRCPL*STGCRSGAPKGSTG Trigger: TCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGCAGATCTACCCGGATGGCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS TCA 90 bp | ATGTTCCGAGCCGCTTCCTTGGCTGCCCGGAGAAGCTGCGACTGGTaGGGAGGCAGAAGACGAAGAAAACGTCGCGCTACTTCTGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: MFRAASLAARRSCDW*GGRRRRKRRATSAP Trigger: CGGGGCAGAAGTAGCGCGACGTTTTCTTCGTCTTCTGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS CCA 90 bp | CCCGAAGGGCTCCACTGGAAACTGCTATGTTCCGAGCCGCTTCCTTaGCTGCCCGGAGAAGCTGCGACTGGTGAGGAGGCAGAAGACGAA | + |
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Preference number: 5 (lower is better) Translates to: PEGLHWKLLCSEPLP*LPGEAATGEEAEDE Trigger: TTCGTCTTCTGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS-3UTR CAA 90 bp | GCTTTCCCTCTCTTGTTCAGGGCCACGTACCACTCTCGGCCTGTCTTTTCAGTTTTCCGAGCCGCTTCCTaGGCTGCCCGGAGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AFPLLFRATYHSRPVFSVFRAAS*AARRSC Trigger: GCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAA...AACTGAAAAGACAGGCCGAGAGTGGTACGTGGCCCTGAACAAGAGAGGGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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| CDS GCA 90 bp | AAGGGCTCCACTGGAAACTGCTATGTTCCGAGCCGCTTCCTTGGCTaGCCGGAGAAGCTGCGACTGGTGAGGAGGCAGAAGACGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: KGSTGNCYVPSRFLG*PEKLRLVRRQKTKK Trigger: TTTCTTCGTCTTCTGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 90 bp | ATCCAAAGCGAAACTTCAGTCTGTACTTCACTGGGCTGGGACTTCTaGGAGGCTGCGACAGGGGCACCTTTGGTTTCACCGGTGGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: IQSETSVCTSLGWDF*EAATGAPLVSPVAF Trigger: AAAAGCCACCGGTGAAACCAAAGGTGCCCCTGTCGCAGCCTCGCAGAAGTCCCAGCCCAGTGAAGTACAGACTGAAGTTTCGCTTTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS GCA 90 bp | GGCTTTTTCTTTTCTGGAACAGTGACGGTGAAGGAAAGTTCCGGTTaGTCGGACTGCTTGAACCTGGGTAGGAAGTGGGTGGAGACGTGT | + |
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Preference number: 5 (lower is better) Translates to: GFFFSGTVTVKESSG*SDCLNLGRKWVETC Trigger: ACACGTCTCCACCCACTTCCTACCCAGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTTCACCGTCACTGTTCCAGAAAAGAAAAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | GACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACGGGCTGCAGCCTCTCTaGGCTTTCCCTCTCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: DMKTWLVIHLLQLHTHTHGLQPL*AFPLLF Trigger: GAACAAGAGAGGGAAAGCCAAGAGAGGCTGCAGCCC...GTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGTTCCGAGCCGCTTCCTaGGCTGCCCGGAGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRFRAAS*AARRSC Trigger: GCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAA...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS TCA 90 bp | CAAATATTTCCAAAATACTTAACACACTGGCTTCGTGGGAGCCATTaGCTTTGCCATCCGGGTAGATCTGCAGATGGAAACCGATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: QIFPKYLTHWLRGSH*LCHPGRSADGNRCP Trigger: TGGGCATCGGTTTCCATCTGCAGATCTACCCGGATGGCAAAGTCAATGGCTCCCACGAAGCCAGTGTGTTAAGTATTTTGGAAATATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | AGACTTGACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACGAAGGAAAGTTCCGGTaGCTCGGACTGCTTGAACCT | + |
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Preference number: 5 (lower is better) Translates to: RLDMKTWLVIHLLQLHTHEGKFR*LGLLEP Trigger: AGGTTCAAGCAGTCCGAGCAACCGGAACTTTCCTTC...GTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTCAAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | TGGTTAGTGATTCATCTCCTTCAGCTACACACACACACACACACACACACACACGACATCGCTAAAAATTaGTTGCTGAAAACTCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WLVIHLLQLHTHTHTHTHDIAKN*LLKTPR Trigger: ACGAGGAGTTTTCAGCAACAAATTTTTAGCGATGTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | AAAATACATTTTGTAACTCTTTGTAAGCTAAACCGTCTGTGGTTTCTGTTGAGGTTGGCTTTCCCTCTCTaGTTCAGGGCCACGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: KIHFVTLCKLNRLWFLLRLAFPL*FRATYH Trigger: GTGGTACGTGGCCCTGAACAAGAGAGGGAAAGCCAA...CCTCAACAGAAACCACAGACGGTTTAGCTTACAAAGAGTTACAAAATGTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS-3UTR CAA 90 bp | AGACTTGACATGAAAACTTGGTTAGTGATTCATCTCCTTCAGCTACACACACACATTATAGCTGTTTTCTaGGAATCTCTCCCTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: RLDMKTWLVIHLLQLHTHIIAVF*ESLPEL Trigger: AAGTTCAGGGAGAGATTCCAAGAAAACAGCTATAAT...GTGTGTGTGTAGCTGAAGGAGATGAATCACTAACCAAGTTTTCATGTCAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS CAA 72 bp | GCCGCTGGAGTCTCCCGGGTTCCTAGGAGGCGCGGGTaGCCCTTCGGGAGTGAGACGCTTCTCCCCGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: AAGVSRVPRRRG*PFGSETLLPVS Trigger: GCTCACGGGGAGAAGCGTCTCACTCCCGAAGGGCAACCCGCGCCTCCTAGGAACCCGGGAGACTCCAGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | TGCCGGTCCGGCGCCCCGAAGGGCTCCACTGGAAACTaGTATGTTCCGAGCCGCTTCCTTGGCTGCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CRSGAPKGSTGN*YVPSRFLGCPE Trigger: CTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | CCGGGTAGATCTGCAGATGGAAACCGATGCCCACTCTaGAGTACAGGCTGCCGGTCCGGCGCCCCGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PGRSADGNRCPL*STGCRSGAPKG Trigger: GCCCTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGCAGATCTACCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS TCA 72 bp | GCGGGTTGCCCTTCGGGAGTGAGACGCTTCTCCCCGTaGGCCCAAGCGCTGTGGATCAGGTGGCTGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AGCPSGVRRFSP*AQALWIRWLQK Trigger: CTTCTGCAGCCACCTGATCCACAGCGCTTGGGCTCACGGGGAGAAGCGTCTCACTCCCGAAGGGCAACCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | GCAGATGGAAACCGATGCCCACTCTGCAGTACAGGCTaGCGGTCCGGCGCCCCGAAGGGCTCCACTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ADGNRCPLCSTG*RSGAPKGSTGN Trigger: GTTTCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS CCA 72 bp | TACAGGCTGCCGGTCCGGCGCCCCGAAGGGCTCCACTaGAAACTGCTATGTTCCGAGCCGCTTCCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YRLPVRRPEGLH*KLLCSEPLPWL Trigger: CAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAGCCCTTCGGGGCGCCGGACCGGCAGCCTGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | CTTTGCCATCCGGGTAGATCTGCAGATGGAAACCGATaGCCACTCTGCAGTACAGGCTGCCGGTCCGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCHPGRSADGNR*PLCSTGCRSGA Trigger: GGCGCCGGACCGGCAGCCTGTACTGCAGAGTGGGCATCGGTTTCCATCTGCAGATCTACCCGGATGGCAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS TCA 72 bp | GCCGCTTCCTTGGCTGCCCGGAGAAGCTGCGACTGGTaGGGAGGCAGAAGACGAAGAAAACGTCGCGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: AASLAARRSCDW*GGRRRRKRRAT Trigger: AGTAGCGCGACGTTTTCTTCGTCTTCTGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS CCA 72 bp | CTCCACTGGAAACTGCTATGTTCCGAGCCGCTTCCTTaGCTGCCCGGAGAAGCTGCGACTGGTGAGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHWKLLCSEPLP*LPGEAATGEEA Trigger: TGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | ACTGGAAACTGCTATGTTCCGAGCCGCTTCCTTGGCTaGCCGGAGAAGCTGCGACTGGTGAGGAGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TGNCYVPSRFLG*PEKLRLVRRQK Trigger: CTTCTGCCTCCTCACCAGTCGCAGCTTCTCCGGGCAGCCAAGGAAGCGGCTCGGAACATAGCAGTTTCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031280.2 ENSMUST00000200059.2 |
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| CDS GCA 72 bp | AGTCTGTACTTCACTGGGCTGGGACTTCTGCGAGGCTaGGACAGGGGCACCTTTGGTTTCACCGGTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLYFTGLGLLRG*DRGTFGFTGGF Trigger: AAAGCCACCGGTGAAACCAAAGGTGCCCCTGTCGCAGCCTCGCAGAAGTCCCAGCCCAGTGAAGTACAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS TCA 72 bp | CCAAAATACTTAACACACTGGCTTCGTGGGAGCCATTaGCTTTGCCATCCGGGTAGATCTGCAGATGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PKYLTHWLRGSH*LCHPGRSADGN Trigger: GTTTCCATCTGCAGATCTACCCGGATGGCAAAGTCAATGGCTCCCACGAAGCCAGTGTGTTAAGTATTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031280.2 |
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| CDS TCA 72 bp | AAATTTGGCTTAACACACTGGCTTCGTGGGAGCCATTaGCTTTGCCATCCGGGTAGATCTGCAGATGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: KFGLTHWLRGSH*LCHPGRSADGN Trigger: GTTTCCATCTGCAGATCTACCCGGATGGCAAAGTCAATGGCTCCCACGAAGCCAGTGTGTTAAGCCAAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200059.2 |
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