Pregenerated sensors for FGF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031074Ensembl transcript IDs: ENSMUST00000105898.2, ENSMUST00000155320.8
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCCTCCCTCCCAACCCACGCCCAGTGTGAAGCCACTGGCCTCTaGCTAAGGGCAAGGGACAGATCCCCGAAGTGGCCCAGACTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PASLPTHAQCEATGL*LRARDRSPKWPRLL Trigger: CAGGAGTCTGGGCCACTTCGGGGATCTGTCCCTTGCCCTTAGTCAGAGGCCAGTGGCTTCACACTGGGCGTGGGTTGGGAGGGAGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 90 bp | TGCTTGCATGTAGCACCTCAGCCCTTTCTCAGGACACAGCCAGTCTaGCACCTTGCAGGGAAGCCCGCAGATCACTGCCTTCTTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CLHVAPQPFLRTQPV*HLAGKPADHCLLHP Trigger: AGGGTGAAGAAGGCAGTGATCTGCGGGCTTCCCTGCAAGGTGTCAGACTGGCTGTGTCCTGAGAAAGGGCTGAGGTGCTACATGCAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | TGTAGCACCTCAGCCCTTTCTCAGGACACAGCCAGTCTGACACCTTaGAGGGAAGCCCGCAGATCACTGCCTTCTTCACCCTCCACAGAA | + |
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Preference number: 1 (lower is better) Translates to: CSTSALSQDTASLTP*REARRSLPSSPSTE Trigger: TTCTGTGGAGGGTGAAGAAGGCAGTGATCTGCGGGCTTCCCTGCAAGGTGTCAGACTGGCTGTGTCCTGAGAAAGGGCTGAGGTGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | GTTCCGGGGAACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATaGCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: VPGNISPIPRVRAAL*QGSHHRDTEEAGPV Trigger: GACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTTCCCCGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 90 bp | TCCACGGTCCACTGCCTCAGGTTGCCAGGACTGACTGCCATTGGCTaGGCTCCATCCGGGATTAGGATGACCCCTGTAATAAGAATTCCC | + |
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Preference number: 1 (lower is better) Translates to: STVHCLRLPGLTAIG*APSGIRMTPVIRIP Trigger: GGGAATTCTTATTACAGGGGTCATCCTAATCCCGGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTGGACCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 90 bp | GCTTTTAGGGCAGCCTCCAGCCACTTAGCTGTGGAAGCTTCACCCTaGCTTAGCCCCCAGGTCCACATGGAATCTCACTGGTGGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: AFRAASSHLAVEASP*LSPQVHMESHWWNA Trigger: AGCATTCCACCAGTGAGATTCCATGTGGACCTGGGGGCTAAGTCAGGGTGAAGCTTCCACAGCTAAGTGGCTGGAGGCTGCCCTAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | GAGAAACACATATACGCTTCATATACAGGAGTGCGAGTGTGTGTGTaGGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: EKHIYASYTGVRVCV*AQRGRGLEVKSSGP Trigger: TGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACACACACTCGCACTCCTGTATATGAAGCGTATATGTGTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 90 bp | AGCTGGGCCTGTCTTAGGGTTGGCTGTCTGGAGATCCTGGAGCCCTaGAGGTGGGTAGCAAGAACAAAGGAAGTACTTCACCTGATAAAA | + |
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Preference number: 1 (lower is better) Translates to: SWACLRVGCLEILEP*RWVARTKEVLHLIK Trigger: TTTTATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCCAGGATCTCCAGACAGCCAACCCTAAGACAGGCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 90 bp | AAAAGGTTGTGTTGTGTCAACCAGGGTCAAATGGTAGATAGGAACTaGGCAGGACATGAATGTTCCTGCCTCCCTCCCAACCCACGCCCA | + |
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Preference number: 1 (lower is better) Translates to: KRLCCVNQGQMVDRN*AGHECSCLPPNPRP Trigger: TGGGCGTGGGTTGGGAGGGAGGCAGGAACATTCATGTCCTGCTCAGTTCCTATCTACCATTTGACCCTGGTTGACACAACACAACCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | AGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTGTGTaGATGCTTCACACACACATGTTCTCAGGAATACACCAACACCCT | + |
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Preference number: 1 (lower is better) Translates to: REAEAWKSKVQGQFV*MLHTHMFSGIHQHP Trigger: AGGGTGTTGGTGTATTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | AAAAACAGTTCCCAGAGAAACACATATACGCTTCATATACAGGAGTaGGAGTGTGTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: KNSSQRNTYTLHIQE*ECVCARREAEAWKS Trigger: TGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACACACACTCGCACTCCTGTATATGAAGCGTATATGTGTTTCTCTGGGAACTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 90 bp | GCCTGTCTTAGGGTTGGCTGTCTGGAGATCCTGGAGCCCTGGAGGTaGGTAGCAAGAACAAAGGAAGTACTTCACCTGATAAAAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: ACLRVGCLEILEPWR*VARTKEVLHLIKTV Trigger: AACTGTTTTTATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCCAGGATCTCCAGACAGCCAACCCTAAGACAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 90 bp | AGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTGTGTGCATaGTTCACACACACATGTTCTCAGGAATACACCAACACCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: RQRPGSQKFRASLCA*FTHTCSQEYTNTLL Trigger: TAGAAGGGTGTTGGTGTATTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGCAGATCACTGCCTTCTTCACCCTCCACAGAATATCTCAGTTGGAGCCTCACCCTCCACGGTCCACTaGCTCAGGTTGCCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PADHCLLHPPQNISVGASPSTVH*LRLPGL Trigger: CAGTCCTGGCAACCTGAGGCAGTGGACCGTGGAGGG...TGAGGCTCCAACTGAGATATTCTGTGGAGGGTGAAGAAGGCAGTGATCTGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTGGTGCCCACTGGAGTTaGTCTCAGAGGGCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VCARREAEAWKSKVQGQFGAHWS*SQRAFQ Trigger: CTGGAAAGCCCTCTGAGACCAACTCCAGTGGGCACC...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTTGTGTGCGTGTGTGTGTCCCAGCCTACAGCCAAATTTCTTCATCAGGAGCCCAAAGACAAGGGTaGGGAGGCCAGGGCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GACVRVCVPAYSQISSSGAQRQG*GGQGSK Trigger: CTTGGAGCCCTGGCCTCCCCACCCTTGTCTTTGGGC...TCCTGATGAAGAAATTTGGCTGTAGGCTGGGACACACACACGCACACAAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTATCTTGGGTGCCCACTaGAGTTGGTCTCAGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VCARREAEAWKSKVQGQFILGAH*SWSQRA Trigger: AGCCCTCTGAGACCAACTCCAGTGGGCACCCAAGAT...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGGGGAACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATGCCAAGGTTCAGAGAGGCAGAGGCCTaGAAGTCAAAAGTTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGEHKPYPEGEGSSMPRFREAEA*KSKVQG Trigger: GCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCT...GAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTTCCCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CAA 90 bp | GGCCAGAAGTCTAAGGTCAAGCTGGTGGGTAAGGTTTTTCAAGGCTaGCTTGCGGTGCCTCCTGAGCTTTTAGGGCAGCCTCCAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: GQKSKVKLVGKVFQG*LAVPPELLGQPPAT Trigger: AGTGGCTGGAGGCTGCCCTAAAAGCTCAGGAGGCACCGCAAGCAAGCCTTGAAAAACCTTACCCACCAGCTTGACCTTAGACTTCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCACATGGAATCTCACTGGTGGAATGCTCTGAATGTCTATGTGCCTCCCCATAACCCACGCCCAGTGTaGAGCCACTGGCCTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: VHMESHWWNALNVYVPPHNPRPV*SHWPLT Trigger: AGTCAGAGGCCAGTGGCTTCACACTGGGCGTGGGTT...ATGGGGAGGCACATAGACATTCAGAGCATTCCACCAGTGAGATTCCATGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR TCA 90 bp | CTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGGGTCTTCCAGAGTCTCTaGCTCAAGCCCCTTAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LCQGSHHRDTEEAGPVLGVFQSL*LKPLSS Trigger: GCTGCTAAGGGGCTTGAGTCAGAGACTCTGGAAGAC...CCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGGTGAGGGCAGCTCTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCGACACCTTTAATGTGTaGATCACAGCCCCCTCCACG | + |
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Preference number: 2 (lower is better) Translates to: EGEGSSMPRFSSQRYRGSDTFNV*ITAPST Trigger: CGTGGAGGGGGCTGTGATTCACACATTAAAGGTGTC...GCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGAGCTGCCCTCACCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CAA 90 bp | CGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTaGTGTGCATGCTTCACACACACATGTTCTCAGGAATACACCAAC | + |
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Preference number: 2 (lower is better) Translates to: RAERQRPGSQKFRAS*CACFTHTCSQEYTN Trigger: GTTGGTGTATTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCCTGCATGGCCTTCTGTAAGCTACTCACATCTAGCAAAACCTTTCAGAAGGACTGACTGCCATTaGCTGGGCTCCATCCGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PEPAWPSVSYSHLAKPFRRTDCH*LGSIRD Trigger: ATCCCGGATGGAGCCCAGCCAATGGCAGTCAGTCCT...TCTGAAAGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | CTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGGCTGGAGCCCTGGAGGTaGGTAGCAAGAACAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LCQGSHHRDTEEAGPVLGLEPWR*VARTKE Trigger: TTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCCAG...CCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGCAGATCACTGCCTTCTTCACCCTCCACAGAATATCTCAGTTGGAGCCTACTCCACATACATCTTaGACTTCGAGTCTTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPQITAFFTLHRISQLEPTPHTS*TSSLPE Trigger: CTCTGGAAGACTCGAAGTTCAAGATGTATGTGGAGT...AGGCTCCAACTGAGATATTCTGTGGAGGGTGAAGAAGGCAGTGATCTGCGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | CTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGGGAACCCACAAACACATaGTTGCATGTAGCACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LCQGSHHRDTEEAGPVLGEPTNT*LHVAPQ Trigger: CTGAGGTGCTACATGCAAGCATGTGTTTGTGGGTTC...CCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGGTTGGCTACCCTTCTACACACATaGTTGTGGGTATTTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: QGSHHRDTEEAGPVLGLATLLHT*LWVFAD Trigger: GTCTGCAAATACCCACAAGCATGTGTGTAGAAGGGT...AGCCAACCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAACACCCTTCTACACACATGCTTGTGGGTATTTGCAGACATAAGAACCCACAAGTGAATCTTGGGTaGCCACTGGAGTTGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HQHPSTHMLVGICRHKNPQVNLG*PLELVS Trigger: TGAGACCAACTCCAGTGGGCACCCAAGATTCACTTG...TGGGTTCTTATGTCTGCAAATACCCACAAGCATGTGTGTAGAAGGGTGTTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTTGTGTGCGTGTGTGTGTCCCAGCCTACAGCCAAATTTCTTCATCAGGACTACACACATGCTTGTaGGTATTTGCAGACATAAGA | + |
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Preference number: 2 (lower is better) Translates to: GACVRVCVPAYSQISSSGLHTCL*VFADIR Trigger: TCTTATGTCTGCAAATACCCACAAGCATGTGTGTAG...TCCTGATGAAGAAATTTGGCTGTAGGCTGGGACACACACACGCACACAAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCCTGGAGGTGGGTAGCAAGAACAAAGGAAGTACTTCACCTGATAAAAACGCCAGTTTGTGTGCATaGTTCACACACACATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GALEVGSKNKGSTSPDKNASLCA*FTHTCS Trigger: AGAACATGTGTGTGTGAAGCATGCACACAAACTGGC...GTTTTTATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGGAGGTGGGTAGCAAGAACAAAGGAAGTACTTCACCTGATAAAAACAGTATGCTTGTGGGTATTTaGAGACATAAGAACCCACAA | + |
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Preference number: 2 (lower is better) Translates to: ALEVGSKNKGSTSPDKNSMLVGI*RHKNPQ Trigger: TTGTGGGTTCTTATGTCTGCAAATACCCACAAGCAT...ACTGTTTTTATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 72 bp | CCCCCTCCACGGTCCACTGCCTCAGGTTGCCAGGACTaGCTGCCATTGGCTGGGCTCCATCCGGGATTAGGA | + |
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Preference number: 3 (lower is better) Translates to: PPPRSTASGCQD*LPLAGLHPGLG Trigger: TCCTAATCCCGGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTGGACCGTGGAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 72 bp | CTCCCAACCCACGCCCAGTGTGAAGCCACTGGCCTCTaGCTAAGGGCAAGGGACAGATCCCCGAAGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: LPTHAQCEATGL*LRARDRSPKWP Trigger: GGGCCACTTCGGGGATCTGTCCCTTGCCCTTAGTCAGAGGCCAGTGGCTTCACACTGGGCGTGGGTTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 72 bp | GTAGCACCTCAGCCCTTTCTCAGGACACAGCCAGTCTaGCACCTTGCAGGGAAGCCCGCAGATCACTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: VAPQPFLRTQPV*HLAGKPADHCL Trigger: AAGGCAGTGATCTGCGGGCTTCCCTGCAAGGTGTCAGACTGGCTGTGTCCTGAGAAAGGGCTGAGGTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 72 bp | GCAGCCTCCAGCCACTTAGCTGTGGAAGCTTCACCCTaGCTTAGCCCCCAGGTCCACATGGAATCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: AASSHLAVEASP*LSPQVHMESHW Trigger: CCAGTGAGATTCCATGTGGACCTGGGGGCTAAGTCAGGGTGAAGCTTCCACAGCTAAGTGGCTGGAGGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 72 bp | TCAGCCCTTTCTCAGGACACAGCCAGTCTGACACCTTaGAGGGAAGCCCGCAGATCACTGCCTTCTTCACCC | + |
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Preference number: 3 (lower is better) Translates to: SALSQDTASLTP*REARRSLPSSP Trigger: GGGTGAAGAAGGCAGTGATCTGCGGGCTTCCCTGCAAGGTGTCAGACTGGCTGTGTCCTGAGAAAGGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | CACTGCCTCAGGTTGCCAGGACTGACTGCCATTGGCTaGGCTCCATCCGGGATTAGGATGACCCCTGTAATA | + |
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Preference number: 3 (lower is better) Translates to: HCLRLPGLTAIG*APSGIRMTPVI Trigger: TATTACAGGGGTCATCCTAATCCCGGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR TCA 72 bp | CCCAGGTCCACATGGAATCTCACTGGTGGAATGCTCTaGATGTCTATGTGCCTCCCCATGGGGCTTGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: PRSTWNLTGGML*MSMCLPMGLVC Trigger: GCACACAAGCCCCATGGGGAGGCACATAGACATTCAGAGCATTCCACCAGTGAGATTCCATGTGGACCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | AGGGTTGGCTGTCTGGAGATCCTGGAGCCCTGGAGGTaGGTAGCAAGAACAAAGGAAGTACTTCACCTGATA | + |
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Preference number: 3 (lower is better) Translates to: RVGCLEILEPWR*VARTKEVLHLI Trigger: TATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCCAGGATCTCCAGACAGCCAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | TGTCTTAGGGTTGGCTGTCTGGAGATCCTGGAGCCCTaGAGGTGGGTAGCAAGAACAAAGGAAGTACTTCAC | + |
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Preference number: 3 (lower is better) Translates to: CLRVGCLEILEP*RWVARTKEVLH Trigger: GTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCCAGGATCTCCAGACAGCCAACCCTAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | ATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTaGGCCTGTCTTAGGGTTGGCTGTCTGGAGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: MPRFSSQRYRGS*ACLRVGCLEIL Trigger: CAGGATCTCCAGACAGCCAACCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTCTTAGCAGCTGGCACTaGCTCTTTGAAAGCTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: VCARREAEAWKSKVQGQFLSSWH*LFESCK Trigger: TTTACAGCTTTCAAAGAGCAAGTGCCAGCTGCTAAG...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTGAGGGCAGCTCTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCCACAGAATATCTCAGTaGGAGCCTCAGGGCATGCTA | + |
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Preference number: 3 (lower is better) Translates to: EGEGSSMPRFSSQRYRGSHRISQ*EPQGML Trigger: TAGCATGCCCTGAGGCTCCAACTGAGATATTCTGTG...GCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGAGCTGCCCTCACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR GCA 72 bp | AACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATaGCAAGGTTCTCATCACAGAGATACAGAGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: NISPIPRVRAAL*QGSHHRDTEEA Trigger: AGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | TTGCTCTTTGAAAGCTGTAAAAGGCATGCAAGTTCTTaGTCCCCCAAGCAGCCAGCCCAAAGACAAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LLFESCKRHASS*SPKQPAQRQGW Trigger: CCACCCTTGTCTTTGGGCTGGCTGCTTGGGGGACCAAGAACTTGCATGCCTTTTACAGCTTTCAAAGAGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR-3UTR CAA 90 bp | TCTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGAAGTTCAGGGCCAGTTaGTGTGCATGCTTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: SMPRFSSQRYRGSWACLRKFRAS*CACFTH Trigger: GTGTGTGAAGCATGCACACAAACTGGCCCTGAACTT...CCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| 3UTR CCA 72 bp | CTAATGGCTTATCGTGGTGCCTTCCCTGAGCCTGCATaGCCTTCTGTAAGCTACTCACATCTAGCAAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: LMAYRGAFPEPA*PSVSYSHLAKP Trigger: AGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGGGAAGGCACCACGATAAGCCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR GCA 72 bp | GAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTGTGTaGATGCTTCACACACACATGTTCTCAGGAATACAC | + |
|
Preference number: 3 (lower is better) Translates to: EAWKSKVQGQFV*MLHTHMFSGIH Trigger: GTGTATTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGCCTGCATGGCCTTCTGTAAGCTACTCACATCTAGCAAAACCTTTCAGAGCTGGCACTTGCTCTTaGAAAGCTGTAAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PEPAWPSVSYSHLAKPFRAGTCS*KAVKGM Trigger: CATGCCTTTTACAGCTTTCAAAGAGCAAGTGCCAGC...TCTGAAAGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR GCA 72 bp | CCTGGAAGTCAAAAGTTCAGGGCCAGTTTGTGTGCATaGTTCACACACACATGTTCTCAGGAATACACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSQKFRASLCA*FTHTCSQEYTN Trigger: GTTGGTGTATTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR GCA 72 bp | CACCAACACCCTTCTACACACATGCTTGTGGGTATTTaGAGACATAAGAACCCACAAACACATGCTTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: HQHPSTHMLVGI*RHKNPQTHACM Trigger: CATGCAAGCATGTGTTTGTGGGTTCTTATGTCTGCAAATACCCACAAGCATGTGTGTAGAAGGGTGTTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR TCA 72 bp | ATAAGAATTCCCTCTCATGTAACTCCACATACATCTTaGACTTCGAGTCTTCCAGAGTCTCTGACTCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IRIPSHVTPHTS*TSSLPESLTQA Trigger: GGCTTGAGTCAGAGACTCTGGAAGACTCGAAGTTCAAGATGTATGTGGAGTTACATGAGAGGGAATTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | ACGGTCCACTGCCTCAGGTTGCCAGGACTGACTGCCATTGGCTGGGCTCCATCCGAGCTCCTGGCCCACTaGACCCTGTGCGGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TVHCLRLPGLTAIGWAPSELLAH*TLCGTG Trigger: GCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTC...GGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTGGACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | ACGGTCCACTGCCTCAGGTTGCCAGGACTGACTGCCATTGGCTGGGCTCCATCCGTTCACGCGGCCGCTTaGGTGCAGCTGGAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVHCLRLPGLTAIGWAPSVHAAA*VQLEVV Trigger: TACCACCTCCAGCTGCACCCAAGCGGCCGCGTGAAC...GGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTGGACCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | TCCGGGGAACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATGCCAAGGTTCCTCTCCTGGGGCTCGTaGCTGGCTACTCTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEHKPYPEGEGSSMPRFLSWGS*LATLQQ Trigger: CTGCTGCAGAGTAGCCAGCCACGAGCCCCAGGAGAG...GAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTTCCCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTCGCTGTTCTCAAGGCTaGCGTTCACGCGGCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCARREAEAWKSKVQGQFRCSQG*RSRGRL Trigger: CAAGCGGCCGCGTGAACGGCAGCCTTGAGAACAGCG...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | TCCGGGGAACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATGCCAAGGTTCATCTCATGGTCCTTGTaGCCCAGCACTCGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGEHKPYPEGEGSSMPRFISWSL*PSTRGR Trigger: CCTGCCCCGAGTGCTGGGCCACAAGGACCATGAGAT...GAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTTCCCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCGCAGATCACTGCCTTCTTCACCCTCCACAGAATATCTCAGTTGGAGCCTTCTGCCTCCGCTGCCTaGGCTGGCTGCCCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPQITAFFTLHRISQLEPSASAA*AGCPLL Trigger: CAGGAGAGGGCAGCCAGCCCAGGCAGCGGAGGCAGA...AGGCTCCAACTGAGATATTCTGTGGAGGGTGAAGAAGGCAGTGATCTGCGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | TCCGGGGAACATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATGCCAAGGTTCAGCCGCACCATCTCATaGTCCTTGTGGCCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SGEHKPYPEGEGSSMPRFSRTIS*SLWPST Trigger: AGTGCTGGGCCACAAGGACCATGAGATGGTGCGGCT...GAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTATGTTCCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCTGGAGGTGGGTAGCAAGAACAAAGGAAGTACTTCACCTGATAAAAACGTGTGCGGCGGGTCTTaGAGCCCCTGCGTGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GALEVGSKNKGSTSPDKNVCGGS*SPCVAD Trigger: GTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACAC...GTTTTTATCAGGTGAAGTACTTCCTTTGTTCTTGCTACCCACCTCCAGGGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | ACGGTCCACTGCCTCAGGTTGCCAGGACTGACTGCCATTGGCTGGGCTCCATCCCTTGCCATGATCACTTaGGCTCTGCTTCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVHCLRLPGLTAIGWAPSLAMIT*ALLLLP Trigger: AGGCAGAAGAAGCAGAGCCCAAGTGATCATGGCAAG...GGATGGAGCCCAGCCAATGGCAGTCAGTCCTGGCAACCTGAGGCAGTGGACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | CTCAGCCCTTTCTCAGGACACAGCCAGTCTGACACCTaGCAGGGAAGCCCGCAGATCACTGCCTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSPFSGHSQSDT*QGSPQITAFFT Trigger: GGTGAAGAAGGCAGTGATCTGCGGGCTTCCCTGCAAGGTGTCAGACTGGCTGTGTCCTGAGAAAGGGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR GCA 90 bp | CACCAACACCCTTCTACACACATGCTTGTGGGTATTTGCAGACATAAGAACCCAGCTGCCTGGGCTGGCTaGCCTCTCCTGGGGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQHPSTHMLVGICRHKNPAAWAG*PLLGLV Trigger: CACGAGCCCCAGGAGAGGGCAGCCAGCCCAGGCAGC...TGGGTTCTTATGTCTGCAAATACCCACAAGCATGTGTGTAGAAGGGTGTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | TCTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGCTGGCTGCCCTCTCCTaGGGCTCGTGGCTGGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SMPRFSSQRYRGSWACLRLAALS*GSWLAT Trigger: AGTAGCCAGCCACGAGCCCCAGGAGAGGGCAGCCAG...CCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR GCA 90 bp | TCTATGCCAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGACGCGGCCGCTTGGGTaGAGCTGGAGGTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMPRFSSQRYRGSWACLRTRPLG*SWRWYL Trigger: CAAGTACCACCTCCAGCTGCACCCAAGCGGCCGCGT...CCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTGGCATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCTTGTGTGCGTGTGTGTGTCCCAGCCTACAGCCAAATTTCTTCATCAGGAGCCAGTCCACCTGTATaGAGCTGGGTGCTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GACVRVCVPAYSQISSSGASPPV*SWVLGV Trigger: CACTCCAAGCACCCAGCTGCATACAGGTGGACTGGC...TCCTGATGAAGAAATTTGGCTGTAGGCTGGGACACACACACGCACACAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTGTCCTCTCTTGTTCATaGCCAGGTACCGCCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCARREAEAWKSKVQGQFVLSCS*PGTAQK Trigger: TTTCTGGGCGGTACCTGGCCATGAACAAGAGAGGAC...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | AAACACATGCTTGCATGTAGCACCTCAGCCCTTTCTCAGGACACAGCCAGTCTGCTTGAAGCCCCTGCGTaGCCGACCCTTGCCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHMLACSTSALSQDTASLLEAPA*PTLAIH Trigger: GTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAG...CAGACTGGCTGTGTCCTGAGAAAGGGCTGAGGTGCTACATGCAAGCATGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | GAATGCTCTGAATGTCTATGTGCCTCCCCATGGGGCTaGTGTGCGTGTGTGTGTCCCAGCCTACAGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ECSECLCASPWG*CACVCPSLQPN Trigger: ATTTGGCTGTAGGCTGGGACACACACACGCACACAAGCCCCATGGGGAGGCACATAGACATTCAGAGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | TCTAAGGTCAAGCTGGTGGGTAAGGTTTTTCAAGGCTaGCTTGCGGTGCCTCCTGAGCTTTTAGGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKVKLVGKVFQG*LAVPPELLGQP Trigger: AGGCTGCCCTAAAAGCTCAGGAGGCACCGCAAGCAAGCCTTGAAAAACCTTACCCACCAGCTTGACCTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | CACCAACACCCTTCTACACACATGCTTGTGGGTATTTGCAGACATAAGAACCCACCGCTTGGGTGCAGCTaGAGGTGGTACTTGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HQHPSTHMLVGICRHKNPPLGCS*RWYLVA Trigger: CGCTACCAAGTACCACCTCCAGCTGCACCCAAGCGG...TGGGTTCTTATGTCTGCAAATACCCACAAGCATGTGTGTAGAAGGGTGTTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCCTGCATGGCCTTCTGTAAGCTACTCACATCTAGCAAAACCTTTCAGAATGCAGCTGGGTGCTTaGAGTGGCCCTGGTAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PEPAWPSVSYSHLAKPFRMQLGA*SGPGRQ Trigger: TTGTCTACCAGGGCCACTCCAAGCACCCAGCTGCAT...TCTGAAAGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | TCTGACTCAAGCCCCTTAGCAGCTGGCACTTGCTCTTaGAAAGCTGTAAAAGGCATGCAAGTTCTTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDSSPLAAGTCS*KAVKGMQVLGP Trigger: GGGACCAAGAACTTGCATGCCTTTTACAGCTTTCAAAGAGCAAGTGCCAGCTGCTAAGGGGCTTGAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | AGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTaGTGTGCATGCTTCACACACACATGTTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQRPGSQKFRAS*CACFTHTCSQE Trigger: TTCCTGAGAACATGTGTGTGTGAAGCATGCACACAAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCCTGCATGGCCTTCTGTAAGCTACTCACATCTAGCAAAACCTTTCAGACACAAACTCACACTCTaGGTTGTAGTGATCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEPAWPSVSYSHLAKPFRHKLTL*VVVIRS Trigger: GCTTCGGATCACTACAACGCAGAGTGTGAGTTTGTG...TCTGAAAGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | AATAAGAATTCCCTCTCATGTAACTCCACATACATCTaGAACTTCGAGTCTTCCAGAGTCTCTGACTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKNSLSCNSTYI*NFESSRVSDSS Trigger: GCTTGAGTCAGAGACTCTGGAAGACTCGAAGTTCAAGATGTATGTGGAGTTACATGAGAGGGAATTCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| 3UTR CAA 72 bp | AAGCTACTCACATCTAGCAAAACCTTTCAGAAAAGGTaGTGTTGTGTCAACCAGGGTCAAATGGTAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLTSSKTFQKR*CCVNQGQMVDR Trigger: CCTATCTACCATTTGACCCTGGTTGACACAACACAACCTTTTCTGAAAGGTTTTGCTAGATGTGAGTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CCA 90 bp | CAGCTGGAGGTGGTACTTGGTAGCGCAGTAGAGCTTGCGGCGCCGTaGCGCCCCGCCGAGGTGCTCGTAAACGCCACCACGGCCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLEVVLGSAVELAAP*RPAEVLVNATTAAR Trigger: GCGGGCGGCCGTGGTGGCGTTTACGAGCACCTCGGCGGGGCGCCACGGCGCCGCAAGCTCTACTGCGCTACCAAGTACCACCTCCAGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
||
| CDS TCA 90 bp | CCATTCACCGACACGTACCAAGGTCTCTGGGCACCAGGTTGCCGTTaGGCTCCTGGCCCACTGGACCCTGTGCGGTACAGGCGGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PFTDTYQGLWAPGCR*APGPLDPVRYRREA Trigger: TGCTTCCCGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCGGTGAATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CCA 90 bp | CCTGGGGCTCGTGGCTGGCTACTCTGCAGCAGCCGCACCATCTCATaGTCCTTGTGGCCCAGCACTCGGGGCAGGAAGAGAGAGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGARGWLLCSSRTIS*SLWPSTRGRKREDF Trigger: AAAGTCCTCTCTCTTCCTGCCCCGAGTGCTGGGCCACAAGGACCATGAGATGGTGCGGCTGCTGCAGAGTAGCCAGCCACGAGCCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CCA 90 bp | CGTGGCTGGCTACTCTGCAGCAGCCGCACCATCTCATGGTCCTTGTaGCCCAGCACTCGGGGCAGGAAGAGAGAGGACTTTTGTGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGWLLCSSRTISWSL*PSTRGRKREDFCVR Trigger: CCGCACACAAAAGTCCTCTCTCTTCCTGCCCCGAGTGCTGGGCCACAAGGACCATGAGATGGTGCGGCTGCTGCAGAGTAGCCAGCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CCA 90 bp | GATGCTATAGGCGCTGTTCTCAAGGCTGCCGTTCACGCGGCCGCTTaGGTGCAGCTGGAGGTGGTACTTGGTAGCGCAGTAGAGCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DAIGAVLKAAVHAAA*VQLEVVLGSAVELA Trigger: CGCAAGCTCTACTGCGCTACCAAGTACCACCTCCAGCTGCACCCAAGCGGCCGCGTGAACGGCAGCCTTGAGAACAGCGCCTATAGCATC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
||
| CDS CCA 90 bp | GAAGAGAGAGGACTTTTGTGTGCGGCGGGTCTTGAAGCCCCTGCGTaGCCGACCCTTGCCATTCACCGACACGTACCAAGGTCTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EERGLLCAAGLEAPA*PTLAIHRHVPRSLG Trigger: GCCCAGAGACCTTGGTACGTGTCGGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAAGTCCTCTCTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS GCA 90 bp | TCTGGGCACCAGGTTGCCGTTGAGCTCCTGGCCCACTGGACCCTGTaGGGTACAGGCGGGAAGCATATGTATTGTAGCCCAGCTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGHQVAVELLAHWTL*GTGGKHMYCSPAHG Trigger: TCCATGAGCTGGGCTACAATACATATGCTTCCCGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
||
| CDS CCA 90 bp | CGACACGTACCAAGGTCTCTGGGCACCAGGTTGCCGTTGAGCTCCTaGCCCACTGGACCCTGTGCGGTACAGGCGGGAAGCATATGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RHVPRSLGTRLPLSS*PTGPCAVQAGSICI Trigger: AATACATATGCTTCCCGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
||
| CDS CCA 90 bp | TGGAGTGGCCCTGGTAGACAAAGTCTCCATCTTGCCATGATCACTTaGGCTCTGCTTCTTCTGCCTCCGCTGCCTGGGCTGGCTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WSGPGRQSLHLAMIT*ALLLLPPLPGLAAL Trigger: GAGGGCAGCCAGCCCAGGCAGCGGAGGCAGAAGAAGCAGAGCCCAAGTGATCATGGCAAGATGGAGACTTTGTCTACCAGGGCCACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGCCCTATCCCGAGGGTGAGGGCAGCTCTATGCCAAGGTTCTCATCACAGATGTGTGCGGCGGGTCTaGAAGCCCCTGCGTGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ISPIPRVRAALCQGSHHRCVRRV*KPLRGR Trigger: TCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACA...TCTGTGATGAGAACCTTGGCATAGAGCTGCCCTCACCCTCGGGATAGGGCTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGCGCGCAGAGAGGCAGAGGCCTGGAAGTCAAAAGTTCAGGGCCAGTTTTACAGCCGTCCTCTCTaGTTCATGGCCAGGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: VCARREAEAWKSKVQGQFYSRPL*FMARYR Trigger: GCGGTACCTGGCCATGAACAAGAGAGGACGGCTGTA...AAACTGGCCCTGAACTTTTGACTTCCAGGCCTCTGCCTCTCTGCGCGCACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGCCTGCATGGCCTTCTGTAAGCTACTCACATCTAGCAAAACCTTTCAGACGTTCACGCGGCCGCTaGGGTGCAGCTGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEPAWPSVSYSHLAKPFRRSRGR*GAAGGG Trigger: ACCACCTCCAGCTGCACCCAAGCGGCCGCGTGAACG...TCTGAAAGGTTTTGCTAGATGTGAGTAGCTTACAGAAGGCCATGCAGGCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTTCTCATCACAGAGATACAGAGGAAGCTGGGCCTGTCTTAGGGTTGGCTACCATCTCATGGTCCTaGTGGCCCAGCACTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGSHHRDTEEAGPVLGLATISWS*WPSTRG Trigger: GCCCCGAGTGCTGGGCCACAAGGACCATGAGATGGT...AGCCAACCCTAAGACAGGCCCAGCTTCCTCTGTATCTCTGTGATGAGAACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCGCAGATCACTGCCTTCTTCACCCTCCACAGAATATCTCAGTTGGAGCCTGAAGAGAGAGGACTTTaGTGTGCGGCGGGTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPQITAFFTLHRISQLEPEERGL*CAAGLE Trigger: TTCAAGACCCGCCGCACACAAAAGTCCTCTCTCTTC...AGGCTCCAACTGAGATATTCTGTGGAGGGTGAAGAAGGCAGTGATCTGCGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CCA 72 bp | GTGGTACTTGGTAGCGCAGTAGAGCTTGCGGCGCCGTaGCGCCCCGCCGAGGTGCTCGTAAACGCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: VVLGSAVELAAP*RPAEVLVNATT Trigger: CGTGGTGGCGTTTACGAGCACCTCGGCGGGGCGCCACGGCGCCGCAAGCTCTACTGCGCTACCAAGTACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
||
| CDS GCA 72 bp | TGGCTGCCCTCTCCTGGGGCTCGTGGCTGGCTACTCTaGAGCAGCCGCACCATCTCATGGTCCTTGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WLPSPGARGWLL*SSRTISWSLWP Trigger: GGGCCACAAGGACCATGAGATGGTGCGGCTGCTGCAGAGTAGCCAGCCACGAGCCCCAGGAGAGGGCAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
||
| CDS CAA 72 bp | GTGCGGCGGGTCTTGAAGCCCCTGCGTGGCCGACCCTaGCCATTCACCGACACGTACCAAGGTCTCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRRVLKPLRGRP*PFTDTYQGLWA Trigger: TGCCCAGAGACCTTGGTACGTGTCGGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 90 bp | GCCATTCACCGACACGTACCAAGGTCTCTGGGCACCAGGTTGCCGTaGAGCTCCTGGCCCACTGGACCCTGTGCGGTACAGGCGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AIHRHVPRSLGTRLP*SSWPTGPCAVQAGS Trigger: GCTTCCCGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCGGTGAATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS TCA 72 bp | GACACGTACCAAGGTCTCTGGGCACCAGGTTGCCGTTaGGCTCCTGGCCCACTGGACCCTGTGCGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: DTYQGLWAPGCR*APGPLDPVRYR Trigger: CCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS CCA 72 bp | GGCGCTGTTCTCAAGGCTGCCGTTCACGCGGCCGCTTaGGTGCAGCTGGAGGTGGTACTTGGTAGCGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: GAVLKAAVHAAA*VQLEVVLGSAV Trigger: TACTGCGCTACCAAGTACCACCTCCAGCTGCACCCAAGCGGCCGCGTGAACGGCAGCCTTGAGAACAGCGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS CAA 72 bp | CGACACGTACCAAGGTCTCTGGGCACCAGGTTGCCGTaGAGCTCCTGGCCCACTGGACCCTGTGCGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: RHVPRSLGTRLP*SSWPTGPCAVQ Trigger: CTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS CAA 90 bp | ACCCTTGCCATTCACCGACACGTACCAAGGTCTCTGGGCACCAGGTaGCCGTTGAGCTCCTGGCCCACTGGACCCTGTGCGGTACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: TLAIHRHVPRSLGTR*PLSSWPTGPCAVQA Trigger: CGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCGGTGAATGGCAAGGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 90 bp | GACTTTTGTGTGCGGCGGGTCTTGAAGCCCCTGCGTGGCCGACCCTaGCCATTCACCGACACGTACCAAGGTCTCTGGGCACCAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: DFCVRRVLKPLRGRP*PFTDTYQGLWAPGC Trigger: GCAACCTGGTGCCCAGAGACCTTGGTACGTGTCGGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS TCA 72 bp | GCAGGAAGAGAGAGGACTTTTGTGTGCGGCGGGTCTTaGAGCCCCTGCGTGGCCGACCCTTGCCATTCACCG | + |
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Preference number: 6 (lower is better) Translates to: AGRERTFVCGGS*SPCVADPCHSP Trigger: CGGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAAGTCCTCTCTCTTCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CCA 72 bp | GGACTTTTGTGTGCGGCGGGTCTTGAAGCCCCTGCGTaGCCGACCCTTGCCATTCACCGACACGTACCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GLLCAAGLEAPA*PTLAIHRHVPR Trigger: CCTTGGTACGTGTCGGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 72 bp | ATTCACCGACACGTACCAAGGTCTCTGGGCACCAGGTaGCCGTTGAGCTCCTGGCCCACTGGACCCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: IHRHVPRSLGTR*PLSSWPTGPCA Trigger: CGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTGGTGCCCAGAGACCTTGGTACGTGTCGGTGAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 72 bp | GGCAGGAAGAGAGAGGACTTTTGTGTGCGGCGGGTCTaGAAGCCCCTGCGTGGCCGACCCTTGCCATTCACC | + |
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Preference number: 6 (lower is better) Translates to: GRKREDFCVRRV*KPLRGRPLPFT Trigger: GGTGAATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAAGTCCTCTCTCTTCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 90 bp | GCTCGTGGCTGGCTACTCTGCAGCAGCCGCACCATCTCATGGTCCTaGTGGCCCAGCACTCGGGGCAGGAAGAGAGAGGACTTTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ARGWLLCSSRTISWS*WPSTRGRKREDFCV Trigger: CACACAAAAGTCCTCTCTCTTCCTGCCCCGAGTGCTGGGCCACAAGGACCATGAGATGGTGCGGCTGCTGCAGAGTAGCCAGCCACGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS GCA 72 bp | CAGGTTGCCGTTGAGCTCCTGGCCCACTGGACCCTGTaGGGTACAGGCGGGAAGCATATGTATTGTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QVAVELLAHWTL*GTGGKHMYCSP Trigger: TGGGCTACAATACATATGCTTCCCGCCTGTACCGCACAGGGTCCAGTGGGCCAGGAGCTCAACGGCAACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS CCA 72 bp | GGCCACAGCCAGTCCACCTGTATGCAGCTGGGTGCTTaGAGTGGCCCTGGTAGACAAAGTCTCCATCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GHSQSTCMQLGA*SGPGRQSLHLA Trigger: GGCAAGATGGAGACTTTGTCTACCAGGGCCACTCCAAGCACCCAGCTGCATACAGGTGGACTGGCTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 90 bp | CGTCCTCTCTTGTTCATGGCCAGGTACCGCCCAGAAAAGAGCCCTTaGATGGCCACCACGCCCACTTCCACCGCAGTAATCTCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: RPLLFMARYRPEKSP*MATTPTSTAVISRM Trigger: CATCCTGGAGATTACTGCGGTGGAAGTGGGCGTGGTGGCCATCAAAGGGCTCTTTTCTGGGCGGTACCTGGCCATGAACAAGAGAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS CCA 72 bp | CCTGGTAGACAAAGTCTCCATCTTGCCATGATCACTTaGGCTCTGCTTCTTCTGCCTCCGCTGCCTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGRQSLHLAMIT*ALLLLPPLPGL Trigger: CAGCCCAGGCAGCGGAGGCAGAAGAAGCAGAGCCCAAGTGATCATGGCAAGATGGAGACTTTGTCTACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105898.2 |
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| CDS CAA 72 bp | TTGTTCATGGCCAGGTACCGCCCAGAAAAGAGCCCTTaGATGGCCACCACGCCCACTTCCACCGCAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: LFMARYRPEKSP*MATTPTSTAVI Trigger: GATTACTGCGGTGGAAGTGGGCGTGGTGGCCATCAAAGGGCTCTTTTCTGGGCGGTACCTGGCCATGAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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| CDS GCA 72 bp | GCCCAGCTCATGGATCCGTTCCACAAACTCACACTCTaGGTTGTAGTGATCCGAAGCATACAGCCGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: AQLMDPFHKLTL*VVVIRSIQPSS Trigger: AGAGGACGGCTGTATGCTTCGGATCACTACAACGCAGAGTGTGAGTTTGTGGAACGGATCCATGAGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105898.2 ENSMUST00000155320.8 |
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