RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FGF21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030827

Ensembl transcript IDs: ENSMUST00000033099.6

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTTCAAGGCTTTGAGCTCCAGGAGACTTTCTGGACTGCGGTGTGCTaGGCCTACCACTGTTCCATCCTCCCTGATCTCCAGGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LQGFELQETFWTAVC*AYHCSILPDLQVGF
Trigger: GAAGCCCACCTGGAGATCAGGGAGGATGGAACAGTGGTAGGCGCAGCACACCGCAGTCCAGAAAGTCTCCTGGAGCTCAAAGCCTTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 90 bp GCAAAGAAACCTAGAGGCTTTGACACCCAGGATTTGAATGACCCCTaGCTTCAAGGCTTTGAGCTCCAGGAGACTTTCTGGACTGCGGTG +
Preference number: 5 (lower is better)
Translates to: AKKPRGFDTQDLNDP*LQGFELQETFWTAV
Trigger: CACCGCAGTCCAGAAAGTCTCCTGGAGCTCAAAGCCTTGAAGCCAGGGGTCATTCAAATCCTGGGTGTCAAAGCCTCTAGGTTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS TCA 90 bp TCTGGCTGTTGGCAAAGAAACCTAGAGGCTTTGACACCCAGGATTTaGATGACCCCTGGCTTCAAGGCTTTGAGCTCCAGGAGACTTTCT +
Preference number: 5 (lower is better)
Translates to: SGCWQRNLEALTPRI*MTPGFKALSSRRLS
Trigger: AGAAAGTCTCCTGGAGCTCAAAGCCTTGAAGCCAGGGGTCATTCAAATCCTGGGTGTCAAAGCCTCTAGGTTTCTTTGCCAACAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 72 bp TCTGGGGGCTCTGGGGGCAGGAATCCTGCTTGGTCTTaGGGCTCGTGGAGCAGGCCTGGCATGGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SGGSGGRNPAWS*GSWSRPGMGRK
Trigger: CTTCCTGCCCATGCCAGGCCTGCTCCACGAGCCCCAAGACCAAGCAGGATTCCTGCCCCCAGAGCCCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 72 bp GAAGCGCACAGGTCCCCAGGATGTTGCATCCTGGTTTaGGGAGTCCTTCTGAGGCAGACGCAGGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: EAHRSPGCCILV*GVLLRQTQGQA
Trigger: GGCCTGCCCCTGCGTCTGCCTCAGAAGGACTCCCCAAACCAGGATGCAACATCCTGGGGACCTGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 72 bp GAATCCTGCTTGGTCTTGGGGCTCGTGGAGCAGGCCTaGCATGGGCAGGAAGCGCACAGGTCCCCAGGATGT +
Preference number: 6 (lower is better)
Translates to: ESCLVLGLVEQA*HGQEAHRSPGC
Trigger: ACATCCTGGGGACCTGTGCGCTTCCTGCCCATGCCAGGCCTGCTCCACGAGCCCCAAGACCAAGCAGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS GCA 72 bp TGGCATGGGCAGGAAGCGCACAGGTCCCCAGGATGTTaGATCCTGGTTTGGGGAGTCCTTCTGAGGCAGACG +
Preference number: 6 (lower is better)
Translates to: WHGQEAHRSPGC*ILVWGVLLRQT
Trigger: CGTCTGCCTCAGAAGGACTCCCCAAACCAGGATGCAACATCCTGGGGACCTGTGCGCTTCCTGCCCATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CAA 72 bp CTGGCATGGGCAGGAAGCGCACAGGTCCCCAGGATGTaGCATCCTGGTTTGGGGAGTCCTTCTGAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: LAWAGSAQVPRM*HPGLGSPSEAD
Trigger: GTCTGCCTCAGAAGGACTCCCCAAACCAGGATGCAACATCCTGGGGACCTGTGCGCTTCCTGCCCATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS GCA 72 bp GGCTTTGAGCTCCAGGAGACTTTCTGGACTGCGGTGTaGTGCGCCTACCACTGTTCCATCCTCCCTGATCTC +
Preference number: 6 (lower is better)
Translates to: GFELQETFWTAV*CAYHCSILPDL
Trigger: GAGATCAGGGAGGATGGAACAGTGGTAGGCGCAGCACACCGCAGTCCAGAAAGTCTCCTGGAGCTCAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS GCA 72 bp TTTGAGCTCCAGGAGACTTTCTGGACTGCGGTGTGCTaGGCCTACCACTGTTCCATCCTCCCTGATCTCCAG +
Preference number: 6 (lower is better)
Translates to: FELQETFWTAVC*AYHCSILPDLQ
Trigger: CTGGAGATCAGGGAGGATGGAACAGTGGTAGGCGCAGCACACCGCAGTCCAGAAAGTCTCCTGGAGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 72 bp CCTAGAGGCTTTGACACCCAGGATTTGAATGACCCCTaGCTTCAAGGCTTTGAGCTCCAGGAGACTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PRGFDTQDLNDP*LQGFELQETFW
Trigger: CCAGAAAGTCTCCTGGAGCTCAAAGCCTTGAAGCCAGGGGTCATTCAAATCCTGGGTGTCAAAGCCTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6
CDS CCA 72 bp AGGATCAAAGTGAGGCGATCCATAGAGAGCTCCATCTaGCTGTTGGCAAAGAAACCTAGAGGCTTTGACACC +
Preference number: 6 (lower is better)
Translates to: RIKVRRSIESSI*LLAKKPRGFDT
Trigger: GGTGTCAAAGCCTCTAGGTTTCTTTGCCAACAGCCAGATGGAGCTCTCTATGGATCGCCTCACTTTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033099.6