Pregenerated sensors for FGF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037225Ensembl transcript IDs: ENSMUST00000038885.10, ENSMUST00000091203.2, ENSMUST00000108120.8, ENSMUST00000138563.9, ENSMUST00000200585.5
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGCCCTaGGGCCTTCGGGATGTCAGACATGTACCTGGTCTGCCGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: RIQVPVEHPAATQEP*GLRDVRHVPGLPPA Trigger: TGCAGGCGGCAGACCAGGTACATGTCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | GCCCTGGGGCCTTCGGGATGTCAGACATGTACCTGGTCTGCCGCCTaGAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: ALGPSGCQTCTWSAA*SLVPSLSTSASRNA Trigger: AGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCGGCAGACCAGGTACATGTCTGACATCCCGAAGGCCCCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | CTGGTGGGTAGTCTAGTGACAGTGTGTACTCTGAGGACCTGGGTGTaGTGGCACATGCCTGCTCCTCACAGCAGAAGGAGGCTGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LVGSLVTVCTLRTWV*WHMPAPHSRRRLRK Trigger: CTTCCTCAGCCTCCTTCTGCTGTGAGGAGCAGGCATGTGCCATCACACCCAGGTCCTCAGAGTACACACTGTCACTAGACTACCCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | AGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTaGGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: RFLKRLVSSQNSGPC*ASGSNTGALGPSGC Trigger: ACATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTTGACACCAGTCTCTTCAAAAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CCA 90 bp | AAAACCTGGCCCGGACTAAACACACGACCCCCATCACCAGCAGGGTaGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: KTWPGLNTRPPSPAG*LGYCCMDSGKGLTK Trigger: TTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGGCCAGGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | GGACTAAACACACGACCCCCATCACCAGCAGGGTGGCTAGGCTACTaGTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GLNTRPPSPAGWLGY*CMDSGKGLTKLTSA Trigger: TGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | CTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGAGCTaGCGGAGAGTTACAAAGCCGCAACGGGAGCAGACTGAATACCAG | + |
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Preference number: 1 (lower is better) Translates to: LQCTQACSTNSITGS*RRVTKPQREQTEYQ Trigger: CTGGTATTCAGTCTGCTCCCGTTGCGGCTTTGTAACTCTCCGGCAGCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | CCAGAAATGCTAACCAGGACTAGAGGGAGCTCAAGGAAAGCCACATaGTGGAGGCTTCCCATCACTCTCTTCCATCTCAAGCTGCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PEMLTRTRGSSRKAT*WRLPITLFHLKLPS Trigger: AGAGGGCAGCTTGAGATGGAAGAGAGTGATGGGAAGCCTCCAGCATGTGGCTTTCCTTGAGCTCCCTCTAGTCCTGGTTAGCATTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | AAGCCACATGCTGGAGGCTTCCCATCACTCTCTTCCATCTCAAGCTaGCCTCTCCCTACATACTACAGAACAGAGAAACCTCAGAACATC | + |
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Preference number: 1 (lower is better) Translates to: KPHAGGFPSLSSISS*PLPTYYRTEKPQNI Trigger: GATGTTCTGAGGTTTCTCTGTTCTGTAGTATGTAGGGAGAGGGCAGCTTGAGATGGAAGAGAGTGATGGGAAGCCTCCAGCATGTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CCA 90 bp | TGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATaGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCT | + |
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Preference number: 1 (lower is better) Translates to: CCMDSGKGLTKLTSA*RSSLQCTQACSTNS Trigger: AGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | TACCTGGTCTGCCGCCTGCAGCCTCGTTCCTTCACTATCAACTTCTaGCAGCAGGAATGCTTGAAGTGTGAATGGATTGATCTAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: YLVCRLQPRSFTINF*QQECLKCEWIDLEN Trigger: GTTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCGGCAGACCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CCA 90 bp | TCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATaGATTGATCTAGAAAACCTGGCCCGGACTAAACACACGACCCCC | + |
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Preference number: 1 (lower is better) Translates to: SFTINFCQQECLKCE*IDLENLARTKHTTP Trigger: GGGGGTCGTGTGTTTAGTCCGGGCCAGGTTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | AACTTCACAGATAGTGTTTGTCCTGTCACCCCCATAGTGCCACAATaGCTGCTAAGCACGACACCCATTCTTTCATCTACTCTGTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: NFTDSVCPVTPIVPQ*LLSTTPILSSTLSY Trigger: ATAGGACAGAGTAGATGAAAGAATGGGTGTCGTGCTTAGCAGTCATTGTGGCACTATGGGGGTGACAGGACAAACACTATCTGTGAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | TGGAAGGGGAGAATATCCCACATCTCAGATGCAGAATTATTGGCTTaGATTATCCGGTTTCAGCTAGTTAGGGGATGTGCTGATTCACGT | + |
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Preference number: 1 (lower is better) Translates to: WKGRISHISDAELLA*IIRFQLVRGCADSR Trigger: ACGTGAATCAGCACATCCCCTAACTAGCTGAAACCGGATAATGCAAGCCAATAATTCTGCATCTGAGATGTGGGATATTCTCCCCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | CAAAATGCCCTGTATGTATTTACAAGTCCAGATCCTAGCAGCCCATaGGCAACATTCATGACATTCACACACAGAAAACAAACCCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: QNALYVFTSPDPSSP*ATFMTFTHRKQTLV Trigger: CACCAGGGTTTGTTTTCTGTGTGTGAATGTCATGAATGTTGCTCATGGGCTGCTAGGATCTGGACTTGTAAATACATACAGGGCATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | TGTTCTTGCATTTGGGTAACAGAACAGGAAGAGGATAAGAAGATGTaGCTTCCAATATACACGTGCATAAGCCTCCAGAAAGACTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: CSCIWVTEQEEDKKM*LPIYTCISLQKDSQ Trigger: CTGAGAGTCTTTCTGGAGGCTTATGCACGTGTATATTGGAAGTCACATCTTCTTATCCTCTTCCTGTTCTGTTACCCAAATGCAAGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | TACCTGGTCTTGGTGCTTGCAGTTTTAGAATGTAATTTCTGGCCATaGCTAACCTATGGACAGATCTCATTCACAGAGAAAGTCAGCATA | + |
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Preference number: 1 (lower is better) Translates to: YLVLVLAVLECNFWP*LTYGQISFTEKVSI Trigger: TATGCTGACTTTCTCTGTGAATGAGATCTGTCCATAGGTTAGGCATGGCCAGAAATTACATTCTAAAACTGCAAGCACCAAGACCAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | ATCCAGAGAGGCATTAGAAGGTATTTAAACAATCAACAGCAATTCTaGAGACTACCAGAAAAGCATCTAAGGCAGACAGCTATAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: IQRGIRRYLNNQQQF*RLPEKHLRQTAIEH Trigger: ATGCTCTATAGCTGTCTGCCTTAGATGCTTTTCTGGTAGTCTTCAGAATTGCTGTTGATTGTTTAAATACCTTCTAATGCCTCTCTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 90 bp | ATATACACGTGCATAAGCCTCCAGAAAGACTCTCAGTGTCTTAGATaGAAAGTACATTTCACAATGTCCAGAAAGCAGTTTGAAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: IYTCISLQKDSQCLR*KVHFTMSRKQFEDK Trigger: TTTGTCTTCAAACTGCTTTCTGGACATTGTGAAATGTACTTTGCATCTAAGACACTGAGAGTCTTTCTGGAGGCTTATGCACGTGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR TCA 90 bp | TTCTGTAATTTACCTACAGCGAGTCAGATTAGTGGTGCTAGGAACTaGGCAGGATCCCCAAGTTTATTTTCTAGAACCTTTAAAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: FCNLPTASQISGARN*AGSPSLFSRTFKEY Trigger: ATATTCTTTAAAGGTTCTAGAAAATAAACTTGGGGATCCTGCTCAGTTCCTAGCACCACTAATCTGACTCGCTGTAGGTAAATTACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CCA 90 bp | AATTCAGACATCCACAAACTCCGGCAGTTTGATGGAAGCTTGAAATaGGACAATAGTGAAGGATTTATCAACATATTAACTTCAGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: NSDIHKLRQFDGSLK*DNSEGFINILTSAL Trigger: CAAAGCTGAAGTTAATATGTTGATAAATCCTTCACTATTGTCCCATTTCAAGCTTCCATCAAACTGCCGGAGTTTGTGGATGTCTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR GCA 90 bp | GGTAACTCAAGTCTAGTCTTCTCCCCCTCCACACTGGGGGAAGCCAGCTGCAGCCATGGAGGAGCTCCCTaGAGTGTACACAGGCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GNSSLVFSPSTLGEASCSHGGAP*SVHRPV Trigger: AACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATG...GCTGCAGCTGGCTTCCCCCAGTGTGGAGGGGGAGAAGACTAGACTTGAGTTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | GAGGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTaGAGCATCCGGCAGCAACACAGGAGCCCTGGGGCCTTCGGGATG | + |
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Preference number: 2 (lower is better) Translates to: EVFEETGVKSEFRSL*SIRQQHRSPGAFGM Trigger: CATCCCGAAGGCCCCAGGGCTCCTGTGTTGCTGCCGGATGCTCAACAGGGACCTGAATTCTGACTTGACACCAGTCTCTTCAAAAACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | TGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATaGACCTCAGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: WLGYCCMDSGKGLTK*TSAWRSSLQCTQAC Trigger: ACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCCATGGAGGAGCTCCCTaGAGTGTACACAGGCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GWLGYCCMDSGKGLTKLTHGGAP*SVHRPV Trigger: AACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATG...GGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | AGACTTCATCCATCACCATCTCCCTCAAAAGAGAGCACATGGAGCAGTAAGAAACCTTGGCCAACTGAGTaGCCGAGGTGGGAGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RLHPSPSPSKESTWSSKKPWPTE*PRWEWG Trigger: TCCCCACTCCCACCTCGGCCACTCAGTTGGCCAAGG...TTTCTTACTGCTCCATGTGCTCTCTTTTGAGGGAGATGGTGATGGATGAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTTAGGAACAAGAGCATGTCTTGGGGGCTGGTATGTGTCCAGTGGGCAGAGTCCGAGAGGTTTTTaGAGAGACTGGTGTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SFLGTRACLGGWYVSSGQSPRGF*RDWCQV Trigger: GACTTGACACCAGTCTCTTCAAAAACCTCTCGGACT...CTGCCCACTGGACACATACCAGCCCCCAAGACATGCTCTTGTTCCTAAGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | CTGCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTaGAAGTGTGAATGGATTGATCTAGAAAACCTGGCCCGGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: LQPRSFTINFCQQEC*KCEWIDLENLARTK Trigger: TTTAGTCCGGGCCAGGTTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGAGTCATTTCACAGCTCACTCAAGTATGTTCAGCACTACAGACTTCTGCCATCACCAGCAGGGTaGCTAGGCTACTGCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: KSESFHSSLKYVQHYRLLPSPAG*LGYCCM Trigger: CATACAGCAGTAGCCTAGCCACCCTGCTGGTGATGG...CAGAAGTCTGTAGTGCTGAACATACTTGAGTGAGCTGTGAAATGACTCTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | CAGAACAGAGAAACCTCAGAACATCTAACATTCAAACATCTCTTCATCAGCAAAGCAACACAGGAGCCCTaGGGCCTTCGGGATGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: QNRETSEHLTFKHLFISKATQEP*GLRDVR Trigger: TCTGACATCCCGAAGGCCCCAGGGCTCCTGTGTTGC...TTTGCTGATGAAGAGATGTTTGAATGTTAGATGTTCTGAGGTTTCTCTGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGGGTGGGGAATAGGGATAAACATAATGCAAACTAGTTCTTCCGTCCTTTTTCTATATCAAGCTTaGGTCCATTGGCGGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KLGWGIGINIMQTSSSVLFLYQA*VHWRPG Trigger: CCCTGGCCGCCAATGGACCCAAGCTTGATATAGAAA...AAGGACGGAAGAACTAGTTTGCATTATGTTTATCCCTATTCCCCACCCCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | TTCTTACTAGAGAAACTTTGTGAGCCTAGACTGTTCTTTGATGCCTCCATTCCCCTGGTATGTGTCCAGTaGGCAGGAAAGACAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: FLLEKLCEPRLFFDASIPLVCVQ*AGKTVW Trigger: CCACACTGTCTTTCCTGCCCACTGGACACATACCAG...GGGAATGGAGGCATCAAAGAACAGTCTAGGCTCACAAAGTTTCTCTAGTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | TTGAGGTGGAAGGGGAGAATATCCCACATCTCAGATGCAGAATTATaGGCTTGCATTATCCGGTTTCAGCTAGTTAGGGGATGTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LRWKGRISHISDAEL*ACIIRFQLVRGCAD Trigger: ATCAGCACATCCCCTAACTAGCTGAAACCGGATAATGCAAGCCAATAATTCTGCATCTGAGATGTGGGATATTCTCCCCTTCCACCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | CCCATCACTCTCTTCCATCTCAAGCTGCCCTCTCCCTACATACTACAGAACAGAGATGGAAGCTTGAAATaGGACAATAGTGAAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: PITLFHLKLPSPYILQNRDGSLK*DNSEGF Trigger: AAATCCTTCACTATTGTCCCATTTCAAGCTTCCATC...TCTGTTCTGTAGTATGTAGGGAGAGGGCAGCTTGAGATGGAAGAGAGTGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR GCA 90 bp | CCATCACTCTCTTCCATCTCAAGCTGCCCTCTCCCTACATACTACAGAACAGAGAACTTCAGCTTTGTTTaGAAACGTGTTCTTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: PSLSSISSCPLPTYYRTENFSFV*KRVLAF Trigger: AAATGCAAGAACACGTTTGCAAACAAAGCTGAAGTT...CTCTGTTCTGTAGTATGTAGGGAGAGGGCAGCTTGAGATGGAAGAGAGTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | CACACACAGAAAACAAACCCTGGTGTGAGGTTCTCACTGACCTGTTTCCTTAGTCAGATGCAGAATTATTaGCTTGCATTATCCGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: HTQKTNPGVRFSLTCFLSQMQNY*LALSGF Trigger: GAAACCGGATAATGCAAGCCAATAATTCTGCATCTG...ACTAAGGAAACAGGTCAGTGAGAACCTCACACCAGGGTTTGTTTTCTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | ACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATaGGTATGTACTTGTACATGTCTGATAAACTTGAAAATGTTTACA | + |
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Preference number: 2 (lower is better) Translates to: TCGSFQEACRSQEKI*VCTCTCLINLKMFT Trigger: TGTAAACATTTTCAAGTTTATCAGACATGTACAAGTACATACCAATATCTTCTCCTGGCTCCGACAGGCCTCCTGGAAACTTCCACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCATTGCATGGATGTTATCAGTAGGACTACTGGCAAGACACATGTATATCTTCCAGATTTTAACTaGAAATCTTTGACGGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALHCMDVISRTTGKTHVYLPDFN*KSLTAS Trigger: AGACGCCGTCAAAGATTTTCAGTTAAAATCTGGAAG...ATATACATGTGTCTTGCCAGTAGTCCTACTGATAACATCCATGCAATGAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR GCA 90 bp | GAACTAAAAACAAAAGCAGAAGCTGACATTCACCATTCTCCTAGACTTGCCCTTGCAGAATTATTGGCTTaGATTATCCGGTTTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ELKTKAEADIHHSPRLALAELLA*IIRFQL Trigger: TAGCTGAAACCGGATAATGCAAGCCAATAATTCTGC...AAGGGCAAGTCTAGGAGAATGGTGAATGTCAGCTTCTGCTTTTGTTTTTAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGAGTCATTTCACAGCTCACTCAAGTATGTTCAGCACTACAGACTTCTGTGCTTGAAGTGTGAATaGATTGATCTAGAAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: KSESFHSSLKYVQHYRLLCLKCE*IDLENL Trigger: CAGGTTTTCTAGATCAATCCATTCACACTTCAAGCA...CAGAAGTCTGTAGTGCTGAACATACTTGAGTGAGCTGTGAAATGACTCTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | CCTTTCAATTCAGACATCCACAAACTCCGGCAGTTTGATGGAAGCTaGAAATGGGACAATAGTGAAGGATTTATCAACATATTAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: PFNSDIHKLRQFDGS*KWDNSEGFINILTS Trigger: TGAAGTTAATATGTTGATAAATCCTTCACTATTGTCCCATTTCAAGCTTCCATCAAACTGCCGGAGTTTGTGGATGTCTGAATTGAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 90 bp | AGCCAGGAGAAGATATTGGTATGTACTTGTACATGTCTGATAAACTaGAAAATGTTTACAAAAGTCATAGCTTTACTTCCCTGCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SQEKILVCTCTCLIN*KMFTKVIALLPCSV Trigger: TACAGAGCAGGGAAGTAAAGCTATGACTTTTGTAAACATTTTCAAGTTTATCAGACATGTACAAGTACATACCAATATCTTCTCCTGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CCA 72 bp | CCCGGACTAAACACACGACCCCCATCACCAGCAGGGTaGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PGLNTRPPSPAG*LGYCCMDSGKG Trigger: ACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR-3UTR CAA 90 bp | CTGGCCCGGACTAAACACACGACCCCCATCACCAGCAGGGTGGCTAGGCTACTGGACTCAGGGAAGGGTTaGACAAAATTGACCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LARTKHTTPITSRVARLLDSGKG*TKLTSA Trigger: TGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTC...CAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR GCA 72 bp | CCTTCGGGATGTCAGACATGTACCTGGTCTGCCGCCTaGAGCCTCGTTCCTTCACTATCAACTTCTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PSGCQTCTWSAA*SLVPSLSTSAS Trigger: GCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCGGCAGACCAGGTACATGTCTGACATCCCGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 72 bp | ACACAGGCCTGTTCTACAAACTCTATCACAGGGAGCTaGCGGAGAGTTACAAAGCCGCAACGGGAGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: TQACSTNSITGS*RRVTKPQREQT Trigger: AGTCTGCTCCCGTTGCGGCTTTGTAACTCTCCGGCAGCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR GCA 72 bp | CTAACCAGGACTAGAGGGAGCTCAAGGAAAGCCACATaGTGGAGGCTTCCCATCACTCTCTTCCATCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTRTRGSSRKAT*WRLPITLFHLK Trigger: CTTGAGATGGAAGAGAGTGATGGGAAGCCTCCAGCATGTGGCTTTCCTTGAGCTCCCTCTAGTCCTGGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | GACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATaGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSGKGLTKLTSA*RSSLQCTQACS Trigger: AGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | AACAAGAGCATGTCTTGGGGGCTGGTATGTGTCCAGTaGGCAGGAAAGACAGTGTGGTTTGAGTGCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: NKSMSWGLVCVQ*AGKTVWFECTG Trigger: TCCTGTGCACTCAAACCACACTGTCTTTCCTGCCCACTGGACACATACCAGCCCCCAAGACATGCTCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | CCCCCTCCCTCCAAGTCAGCCTGTAGGGAGCTAGGATaGACTCTGCACTTAGTCACTGATCTGCAAAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: PPPSKSACRELG*TLHLVTDLQSI Trigger: TATACTTTGCAGATCAGTGACTAAGTGCAGAGTTCATCCTAGCTCCCTACAGGCTGACTTGGAGGGAGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | TGCCGCCTGCAGCCTCGTTCCTTCACTATCAACTTCTaGCAGCAGGAATGCTTGAAGTGTGAATGGATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRLQPRSFTINF*QQECLKCEWID Trigger: ATCAATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | GAGGCTGAGGAAGAAGGAAGGTGTATCAAGGCCCTGTaGTACTCAGACCATGCTATGTGCAAACACATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EAEEEGRCIKAL*YSDHAMCKHIC Trigger: ACAGATGTGTTTGCACATAGCATGGTCTGAGTAGCACAGGGCCTTGATACACCTTCCTTCTTCCTCAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | TCTGATTTCAAAGAAATGCAGTTTCTATATCAAGCTTaGGTCCATTGGCGGCCAGGGCAGGAGCAAAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SDFKEMQFLYQA*VHWRPGQEQRA Trigger: GGCCCTTTGCTCCTGCCCTGGCCGCCAATGGACCCAAGCTTGATATAGAAACTGCATTTCTTTGAAATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | AACTCTTTCTTAGGAACAAGAGCATGTCTTGGGGGCTaGTATGTGTCCAGTGGGCAGGAAAGACAGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: NSFLGTRACLGG*YVSSGQERQCG Trigger: ACCACACTGTCTTTCCTGCCCACTGGACACATACCAGCCCCCAAGACATGCTCTTGTTCCTAAGAAAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGAAGGGTTTGACAAAATaGACCTCAGCATGGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GYCCMDSGKGLTKLTSAWKGLTK*TSAWRS Trigger: GCTCCTCCATGCTGAGGTCAATTTTGTCAAACCCTT...CCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | GGGGAAGCCAGCTGCAGCCCTGCATACCTTGTCAAATaGATTAAGGTGAGGGTTTATTCCCTCTTTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GEASCSPAYLVK*IKVRVYSLFEL Trigger: AAGCTCAAAGAGGGAATAAACCCTCACCTTAATTCATTTGACAAGGTATGCAGGGCTGCAGCTGGCTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | TTTCCAGAACTCTTTCTTAGGAACAAGAGCATGTCTTaGGGGCTGGTATGTGTCCAGTGGGCAGGAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FPELFLRNKSMS*GLVCVQWAGKT Trigger: TGTCTTTCCTGCCCACTGGACACATACCAGCCCCCAAGACATGCTCTTGTTCCTAAGAAAGAGTTCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAAGACTCAGGGAAGGGTTaGACAAAATTGACCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPRSFTINFCQQECLKCEDSGKG*TKLTSA Trigger: TGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTC...TTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCCTGTACAGTTGATAGCTATGCGGGAGCCCCTTTCCAATGGTTCTCTGAGTGCAGAATTATTGGCTaGCATTATCCGGTTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FACTVDSYAGAPFQWFSECRIIG*HYPVSA Trigger: AGCTGAAACCGGATAATGCAAGCCAATAATTCTGCA...CTCAGAGAACCATTGGAAAGGGGCTCCCGCATAGCTATCAACTGTACAGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | CCGCAACGGGAGCAGACTGAATACCAGATTTCAACCTaGCGCCAGTTTTCTCACATATGTTATGTCCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PQREQTEYQIST*RQFSHICYVHG Trigger: ACCATGGACATAACATATGTGAGAAAACTGGCGTCAGGTTGAAATCTGGTATTCAGTCTGCTCCCGTTGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | GATAGTGTTTGTCCTGTCACCCCCATAGTGCCACAATaGCTGCTAAGCACGACACCCATTCTTTCATCTACT | + |
|
Preference number: 3 (lower is better) Translates to: DSVCPVTPIVPQ*LLSTTPILSST Trigger: AGTAGATGAAAGAATGGGTGTCGTGCTTAGCAGTCATTGTGGCACTATGGGGGTGACAGGACAAACACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | CAAGTCCAGATCCTAGCAGCCCATGAGCAACATTCATaGCATTCACACACAGAAAACAAACCCTGGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QVQILAAHEQHS*HSHTENKPWCE Trigger: CTCACACCAGGGTTTGTTTTCTGTGTGTGAATGTCATGAATGTTGCTCATGGGCTGCTAGGATCTGGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | AGGAAGGTGTATCAAGGCCCTGTGCTACTCAGACCATaGTATGTGCAAACACATCTGTATTTTGTAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RKVYQGPVLLRP*YVQTHLYFVGA Trigger: TGCCCCTACAAAATACAGATGTGTTTGCACATAGCATGGTCTGAGTAGCACAGGGCCTTGATACACCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | GGTATGTGTCCAGTGGGCAGGAAAGACAGTGTGGTTTaGGTGCACAGGAACTATGTGTTTCTAATAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GMCPVGRKDSVV*VHRNYVFLIAL Trigger: AAGAGCTATTAGAAACACATAGTTCCTGTGCACTCAAACCACACTGTCTTTCCTGCCCACTGGACACATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | CATGTTGAAACCAAGGGAGAGACTTCCATTTTGAGGTaGAAGGGGAGAATATCCCACATCTCAGATGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HVETKGETSILR*KGRISHISDAE Trigger: TTCTGCATCTGAGATGTGGGATATTCTCCCCTTCCACCTCAAAATGGAAGTCTCTCCCTTGGTTTCAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | GCTGCAGCCCTGCATACCTTGTCAAATGAATTAAGGTaGGGGTTTATTCCCTCTTTGAGCTTTAGTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: AAALHTLSNELR*GFIPSLSFSRS Trigger: GGATCTACTAAAGCTCAAAGAGGGAATAAACCCTCACCTTAATTCATTTGACAAGGTATGCAGGGCTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | TTACCTACAGCGAGTCAGATTAGTGGTGCTAGGAACTaGGCAGGATCCCCAAGTTTATTTTCTAGAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPTASQISGARN*AGSPSLFSRTF Trigger: AAAGGTTCTAGAAAATAAACTTGGGGATCCTGCTCAGTTCCTAGCACCACTAATCTGACTCGCTGTAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | AGAATATCCCACATCTCAGATGCAGAATTATTGGCTTaGATTATCCGGTTTCAGCTAGTTAGGGGATGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RISHISDAELLA*IIRFQLVRGCA Trigger: AGCACATCCCCTAACTAGCTGAAACCGGATAATGCAAGCCAATAATTCTGCATCTGAGATGTGGGATATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR-3UTR CAA 90 bp | GAACTAAAAACAAAAGCAGAAGCTGACATTCACCATTCTCCTAGACTTGCCCTTGACAGCTATTCCATTTaGGTGTTAGTGAGTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ELKTKAEADIHHSPRLALDSYSI*VLVSPK Trigger: CTTGGGACTCACTAACACCAAAATGGAATAGCTGTC...AAGGGCAAGTCTAGGAGAATGGTGAATGTCAGCTTCTGCTTTTGTTTTTAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | GTGCACAGGAACTATGTGTTTCTAATAGCTCTTCATTaGATGGATGTTATCAGTAGGACTACTGGCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VHRNYVFLIALH*MDVISRTTGKT Trigger: TGTCTTGCCAGTAGTCCTACTGATAACATCCATGCAATGAAGAGCTATTAGAAACACATAGTTCCTGTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR GCA 72 bp | TGCATAAGCCTCCAGAAAGACTCTCAGTGTCTTAGATaGAAAGTACATTTCACAATGTCCAGAAAGCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CISLQKDSQCLR*KVHFTMSRKQF Trigger: AAACTGCTTTCTGGACATTGTGAAATGTACTTTGCATCTAAGACACTGAGAGTCTTTCTGGAGGCTTATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTTATGTGTTTCCAGCCTTACAAAGATATCTGATGAGACAGCTATTCCATTTTTGCCAGCAGGAATGCTaGAAGTGTGAATGGATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CYVFPALQRYLMRQLFHFCQQEC*KCEWID Trigger: ATCAATCCATTCACACTTCAAGCATTCCTGCTGGCA...AAAATGGAATAGCTGTCTCATCAGATATCTTTGTAAGGCTGGAAACACATAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR TCA 72 bp | GGCATTAGAAGGTATTTAAACAATCAACAGCAATTCTaGAGACTACCAGAAAAGCATCTAAGGCAGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GIRRYLNNQQQF*RLPEKHLRQTA Trigger: AGCTGTCTGCCTTAGATGCTTTTCTGGTAGTCTTCAGAATTGCTGTTGATTGTTTAAATACCTTCTAATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CCA 72 bp | ATCCACAAACTCCGGCAGTTTGATGGAAGCTTGAAATaGGACAATAGTGAAGGATTTATCAACATATTAACT | + |
|
Preference number: 3 (lower is better) Translates to: IHKLRQFDGSLK*DNSEGFINILT Trigger: AGTTAATATGTTGATAAATCCTTCACTATTGTCCCATTTCAAGCTTCCATCAAACTGCCGGAGTTTGTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | TTGACCTCAGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACCTTGAAGTGGCCTGGTaGGAAGGCGGCGCCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSAWRSSLQCTQACSTNLEVAW*EGGAAV Trigger: GACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAG...GTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | GCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACACTTGAAGTGGCCTGGTaGGAAGGCGGCGCCGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWRSSLQCTQACSTNSITLEVAW*EGGAAV Trigger: GACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAG...TGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCGTCCTTGAAGTGGCCTaGTGGGAAGGCGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWLGYCCMDSGKGLTKLTVLEVA*WEGGAA Trigger: GGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGAC...GGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGTCCTTGAAGTGGCCTaGTGGGAAGGCGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MEELPAVYTGLFYKLYHRVLEVA*WEGGAA Trigger: GGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGAC...CCTGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR GCA 90 bp | GCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGCCGTCGGGATGGATaGGCAGGAAGAAGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRSSLQCTQACSTNSITGRRDG*AGRSRR Trigger: ACGGCGGCTTCTTCCTGCGCATCCATCCCGACGGCC...TGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGCCCGGACTAAACACACGACCCCCATCACCAGCAGGGTGGCTAGGCTACTTGGAAGAAACAGTATaGCCTTCTGTCCAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TWPGLNTRPPSPAGWLGYLEETV*PSVQVP Trigger: CGGGACCTGGACAGAAGGCCATACTGTTTCTTCCAA...GTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGGCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR TCA 90 bp | CCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGAGAGTGTCTCAGCCGCTTGGGGTCCTTaGAGTGGCCTGGTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAVYTGLFYKLYHRESVSAAWGP*SGLVGR Trigger: CCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGC...TGAGACACTCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138563.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCACCAGCAGGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTGTCCAGGTCCCGTTTTaGATCCGAGTTTATACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPAGWLGYCCMDSGKGVQVPF*IRVYTA Trigger: GGCAGTATAAACTCGGATCCAAAACGGGACCTGGAC...ACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGTGATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR GCA 90 bp | TGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGGCCGTCGGGATGGATaGGCAGGAAGAAGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGYCCMDSGKGLTKLTSGRRDG*AGRSRR Trigger: ACGGCGGCTTCTTCCTGCGCATCCATCCCGACGGCC...TGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | TGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCATTGGGGTCCTTGAAGTaGCCTGGTGGGAAGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WLGYCCMDSGKGLTKLTSLGSLK*PGGKAA Trigger: CGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAA...TGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCGGACTAAACACACGACCCCCATCACCAGCAGGGTGGCTAGGCTACTGGCTCTTAGCAGACATTaGAAGAAACAGTATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LARTKHTTPITSRVARLLALSRH*KKQYGL Trigger: AAGGCCATACTGTTTCTTCCAATGTCTGCTAAGAGC...CAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| 3UTR CAA 72 bp | CAAAGAAATGCAGTTTCTATATCAAGCTTGGGTCCATaGGCGGCCAGGGCAGGAGCAAAGGGCCTTGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRNAVSISSLGP*AARAGAKGLAL Trigger: CAGGGCAAGGCCCTTTGCTCCTGCCCTGGCCGCCAATGGACCCAAGCTTGATATAGAAACTGCATTTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| CDS-3UTR GCA 90 bp | GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGAGAAGCCGCCGTTCTTaGAGTAGAGCCGCTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYCCMDSGKGLTKLTSAWRSRRS*SRAAWG Trigger: ACCCCAAGCGGCTCTACTGCAAGAACGGCGGCTTCT...CCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR GCA 90 bp | CCATCACTCTCTTCCATCTCAAGCTGCCCTCTCCCTACATACTACAGAACAGAGAGAAGCCGCCGTTCTTaGAGTAGAGCCGCTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLSSISSCPLPTYYRTERSRRS*SRAAWG Trigger: ACCCCAAGCGGCTCTACTGCAAGAACGGCGGCTTCT...CTCTGTTCTGTAGTATGTAGGGAGAGGGCAGCTTGAGATGGAAGAGAGTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| 3UTR CAA 72 bp | TTCTTTGATGCCTCCATTCCCTCCCCCATTGTGTGGTaGGTCCTGGGAACTGTACTAAGCACCCCACACATG | + |
|
Preference number: 4 (lower is better) Translates to: FFDASIPSPIVW*VLGTVLSTPHM Trigger: CATGTGTGGGGTGCTTAGTACAGTTCCCAGGACCAACCACACAATGGGGGAGGGAATGGAGGCATCAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| CDS-3UTR TCA 90 bp | GAACTAAAAACAAAAGCAGAAGCTGACATTCACCATTCTCCTAGACTTGCCCTTGCCGCTTGGGGTCCTTaGAGTGGCCTGGTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELKTKAEADIHHSPRLALAAWGP*SGLVGR Trigger: CCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGC...AAGGGCAAGTCTAGGAGAATGGTGAATGTCAGCTTCTGCTTTTGTTTTTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCGATCCGAGTTTATACTaGCCAGTTCGTTTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWLGYCCMDSGKGLTKLTDPSLY*PVRFSA Trigger: GGCACTGAAACGAACTGGGCAGTATAAACTCGGATC...GGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | ACCAGCAGGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAACCTCTCTCTTCTGCTTaGAGTTGTAGTTTGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSRVARLLLYGLREGFDKPLSSA*SCSLTC Trigger: ACACGTCAAACTACAACTCCAAGCAGAAGAGAGAGG...TTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | CGCCTGCAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGCCTCTCTCTTCTGCTTaGAGTTGTAGTTTGACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLQPRSFTINFCQQECLKPLSSA*SCSLTC Trigger: ACACGTCAAACTACAACTCCAAGCAGAAGAGAGAGG...CTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTGCAGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
||
| CDS-3UTR CCA 90 bp | CCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGAGAGTGTCTCAGTGCCACATACCAACTaGAGTATTTCCGTGACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAVYTGLFYKLYHRESVSVPHTN*SISVTG Trigger: ACCGGTCACGGAAATACTCCAGTTGGTATGTGGCAC...TGAGACACTCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138563.9 |
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| CDS-3UTR CCA 90 bp | GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGTTGGAAGAAACAGTATaGCCTTCTGTCCAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: GYCCMDSGKGLTKLTSAWLEETV*PSVQVP Trigger: CGGGACCTGGACAGAAGGCCATACTGTTTCTTCCAA...CCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR CAA 72 bp | TACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATaGACCTCAGCATGGAGGAGCTCCCTGCAGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: YCCMDSGKGLTK*TSAWRSSLQCT Trigger: TGTACACTGCAGGGAGCTCCTCCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR GCA 90 bp | GGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGCCCAGTTCGTTTCAGTaGCACATACCAACTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: GYCCMDSGKGLTKLTSAWPSSFQ*HIPTGV Trigger: TACTCCAGTTGGTATGTGGCACTGAAACGAACTGGG...CCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CCA 90 bp | CTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAGCATGGAGGTGCCACATACCAACTaGAGTATTTCCGTGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: LLLYGLREGFDKIDLSMEVPHTN*SISVTG Trigger: ACCGGTCACGGAAATACTCCAGTTGGTATGTGGCAC...CTCCATGCTGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CCA 90 bp | CAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAAGTCCAGGTCCCGTTTTaGATCCGAGTTTATACTGCC | + |
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Preference number: 4 (lower is better) Translates to: QPRSFTINFCQQECLKCEVQVPF*IRVYTA Trigger: GGCAGTATAAACTCGGATCCAAAACGGGACCTGGAC...TTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR TCA 90 bp | CCATCACTCTCTTCCATCTCAAGCTGCCCTCTCCCTACATACTACAGAACAGAGACTGGAGTATTTCCGTaGCCGGTAAGTATTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PSLSSISSCPLPTYYRTETGVFP*PVSIVV Trigger: AACTACAATACTTACCGGTCACGGAAATACTCCAGT...CTCTGTTCTGTAGTATGTAGGGAGAGGGCAGCTTGAGATGGAAGAGAGTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| CDS-3UTR TCA 90 bp | ACAGGCCTGTTCTACAAACTCTATCACAGGGAGAGTGTCTCAGTGACAGTGTCAACTGGAGTATTTCCGTaGCCGGTAAGTATTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: TGLFYKLYHRESVSVTVSTGVFP*PVSIVV Trigger: AACTACAATACTTACCGGTCACGGAAATACTCCAGT...TGACACTGTCACTGAGACACTCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138563.9 |
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| 3UTR CAA 72 bp | CGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTaGAAGTGTGAATGGATTGATCTAGAAAACCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSFTINFCQQEC*KCEWIDLENLA Trigger: GGCCAGGTTTTCTAGATCAATCCATTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| 3UTR CAA 72 bp | TGGTATGTGTCCAGTGGGCAGGAAAGACAGTGTGGTTaGAGTGCACAGGAACTATGTGTTTCTAATAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: WYVSSGQERQCG*SAQELCVSNSS Trigger: AGAGCTATTAGAAACACATAGTTCCTGTGCACTCAAACCACACTGTCTTTCCTGCCCACTGGACACATACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 72 bp | CAAGAACTTTCTAACACAGTCATTTCGCCTGTACAGTaGATAGCTATGCGGGAGCCCCTTTCCAATGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QELSNTVISPVQ*IAMREPLSNGS Trigger: AGAACCATTGGAAAGGGGCTCCCGCATAGCTATCAACTGTACAGGCGAAATGACTGTGTTAGAAAGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| 3UTR CAA 72 bp | AAGGGGAGAATATCCCACATCTCAGATGCAGAATTATaGGCTTGCATTATCCGGTTTCAGCTAGTTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGRISHISDAEL*ACIIRFQLVRG Trigger: TCCCCTAACTAGCTGAAACCGGATAATGCAAGCCAATAATTCTGCATCTGAGATGTGGGATATTCTCCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| CDS-3UTR GCA 90 bp | GAGGGATACAAAGTTAGCAAGAACTTTCTAACACAGTCATTTCGCCTGTACAGTGATCCGAGTTTATACTaGCCAGTTCGTTTCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: EGYKVSKNFLTQSFRLYSDPSLY*PVRFSA Trigger: GGCACTGAAACGAACTGGGCAGTATAAACTCGGATC...ACTGTACAGGCGAAATGACTGTGTTAGAAAGTTCTTGCTAACTTTGTATCCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| CDS-3UTR CCA 90 bp | TTCTTACTAGAGAAACTTTGTGAGCCTAGACTGTTCTTTGATGCCTCCATTCCCGCTCTTAGCAGACATTaGAAGAAACAGTATGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: FLLEKLCEPRLFFDASIPALSRH*KKQYGL Trigger: AAGGCCATACTGTTTCTTCCAATGTCTGCTAAGAGC...GGGAATGGAGGCATCAAAGAACAGTCTAGGCTCACAAAGTTTCTCTAGTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200585.5 |
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| CDS CCA 90 bp | GCCGCCGTTCTTGCAGTAGAGCCGCTTGGGGTCCTTGAAGTGGCCTaGTGGGAAGGCGGCGCCGCCGTCCTCCGGCAGTGCGGGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: AAVLAVEPLGVLEVA*WEGGAAVLRQCGKR Trigger: TCGCTTCCCGCACTGCCGGAGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGCAAGAACGGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 90 bp | GCCGTTCTTGCAGTAGAGCCGCTTGGGGTCCTTGAAGTGGCCTGGTaGGAAGGCGGCGCCGCCGTCCTCCGGCAGTGCGGGAAGCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: AVLAVEPLGVLEVAW*EGGAAVLRQCGKRG Trigger: ACCTCGCTTCCCGCACTGCCGGAGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGCAAGAACGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS TCA 90 bp | GCAGGAAGAAGCCGCCGTTCTTGCAGTAGAGCCGCTTGGGGTCCTTaGAGTGGCCTGGTGGGAAGGCGGCGCCGCCGTCCTCCGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: AGRSRRSCSRAAWGP*SGLVGRRRRRPPAV Trigger: CACTGCCGGAGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGCAAGAACGGCGGCTTCTTCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | ACCAGCAGGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAAGCCGCTTGGGGTCCTaGAAGTGGCCTGGTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TSRVARLLLYGLREGFDKSRLGS*KWPGGK Trigger: CTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCT...TTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCACCCTGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | CTGGCCCGGACTAAACACACGACCCCCATCACCAGCAGGGTGGCTAGGCTACTGTGTCCAGGTCCCGTTTaGGATCCGAGTTTATACTGC | + |
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Preference number: 5 (lower is better) Translates to: LARTKHTTPITSRVARLLCPGPV*DPSLYC Trigger: GCAGTATAAACTCGGATCCAAAACGGGACCTGGACA...CAGTAGCCTAGCCACCCTGCTGGTGATGGGGGTCGTGTGTTTAGTCCGGGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | ACAGGCCTGTTCTACAAACTCTATCACAGGGAGAGTGTCTCAGTGACAGTGTCAAGCCGCTTGGGGTCCTaGAAGTGGCCTGGTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TGLFYKLYHRESVSVTVSSRLGS*KWPGGK Trigger: CTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCT...TGACACTGTCACTGAGACACTCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138563.9 |
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| CDS CCA 90 bp | TTGGCACACACTCCCTTGATAGACACAACTCCTCTCTCTTCTGCTTaGAGTTGTAGTTTGACGTGTGGGTCGCTCTTCTCGCGGACGCCA | + |
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Preference number: 5 (lower is better) Translates to: LAHTPLIDTTPLSSA*SCSLTCGSLFSRTP Trigger: TGGCGTCCGCGAGAAGAGCGACCCACACGTCAAACTACAACTCCAAGCAGAAGAGAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | ACCTCAGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTTTGGCACACACTCCCTaGATAGACACAACTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TSAWRSSLQCTQACSTNSLAHTP*IDTTPL Trigger: GAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAA...AGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGGAGCTCCTCCATGCTGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | CCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGAGAGTGTCTCTTGGCACACACTCCCTaGATAGACACAACTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PCSVHRPVLQTLSQGECLLAHTP*IDTTPL Trigger: GAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAA...GAGACACTCTCCCTGTGATAGAGTTTGTAGAACAGGCCTGTGTACACTGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138563.9 |
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| CDS GCA 90 bp | AGTATGGCCTTCTGTCCAGGTCCCGTTTTGGATCCGAGTTTATACTaGCCAGTTCGTTTCAGTGCCACATACCAACTGGAGTATTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: SMAFCPGPVLDPSLY*PVRFSATYQLEYFR Trigger: ACGGAAATACTCCAGTTGGTATGTGGCACTGAAACGAACTGGGCAGTATAAACTCGGATCCAAAACGGGACCTGGACAGAAGGCCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | TGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTCAATAGCAAGGTACCGGTaGGCACACACTCCCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: WLGYCCMDSGKGLTKLTSIARYR*AHTPLI Trigger: TATCAAGGGAGTGTGTGCCAACCGGTACCTTGCTAT...TGAGGTCAATTTTGTCAAACCCTTCCCTGAGTCCATACAGCAGTAGCCTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTCGTTCCTTCACTATCAACTTCTGCCAGCAGGAATGCTTGAAGTGTGAATGTCCAGGTCCCGTTTaGGATCCGAGTTTATACTGC | + |
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Preference number: 5 (lower is better) Translates to: QPRSFTINFCQQECLKCECPGPV*DPSLYC Trigger: GCAGTATAAACTCGGATCCAAAACGGGACCTGGACA...TTCACACTTCAAGCATTCCTGCTGGCAGAAGTTGATAGTGAAGGAACGAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 90 bp | TTGGCACACACTCCCTTGATAGACACAACTCCTCTCTCTTCTGCTTaGAGTTGTAGTTTGAATGTATTACTGGCATTCAGCTTGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LAHTPLIDTTPLSSA*SCSLNVLLAFSLWS Trigger: TGACCACAAGCTGAATGCCAGTAATACATTCAAACTACAACTCCAAGCAGAAGAGAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091203.2 |
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| CDS TCA 90 bp | CTGCCCAGTTCGTTTCAGTGCCACATACCAACTGGAGTATTTCCGTaGCCGGTAAGTATTGTAGTTATTAGATTCCAGTCGTTCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LPSSFQCHIPTGVFP*PVSIVVIRFQSFKE Trigger: TTCTTTGAACGACTGGAATCTAATAACTACAATACTTACCGGTCACGGAAATACTCCAGTTGGTATGTGGCACTGAAACGAACTGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 72 bp | GCAGTAGAGCCGCTTGGGGTCCTTGAAGTGGCCTGGTaGGAAGGCGGCGCCGCCGTCCTCCGGCAGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: AVEPLGVLEVAW*EGGAAVLRQCG Trigger: CCCGCACTGCCGGAGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 72 bp | CTTGCAGTAGAGCCGCTTGGGGTCCTTGAAGTGGCCTaGTGGGAAGGCGGCGCCGCCGTCCTCCGGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LAVEPLGVLEVA*WEGGAAVLRQC Trigger: GCACTGCCGGAGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGCAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS TCA 72 bp | AGCCGCCGTTCTTGCAGTAGAGCCGCTTGGGGTCCTTaGAGTGGCCTGGTGGGAAGGCGGCGCCGCCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRRSCSRAAWGP*SGLVGRRRRRP Trigger: AGGACGGCGGCGCCGCCTTCCCACCAGGCCACTTCAAGGACCCCAAGCGGCTCTACTGCAAGAACGGCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038885.10 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CAA 72 bp | AGCAGCCGTCCATCTTCCTTCATAGCAAGGTACCGGTaGGCACACACTCCCTTGATAGACACAACTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPSSFIARYR*AHTPLIDTTPL Trigger: GAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAACCGGTACCTTGCTATGAAGGAAGATGGACGGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CAA 90 bp | CAAGAAGCCAGCAGCCGTCCATCTTCCTTCATAGCAAGGTACCGGTaGGCACACACTCCCTTGATAGACACAACTCCTCTCTCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QEASSRPSSFIARYR*AHTPLIDTTPLSSA Trigger: AGCAGAAGAGAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAACCGGTACCTTGCTATGAAGGAAGATGGACGGCTGCTGGCTTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038885.10 |
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| CDS CAA 90 bp | TTAGAAGCCAGCAGCCGTCCATCTTCCTTCATAGCAAGGTACCGGTaGGCACACACTCCCTTGATAGACACAACTCCTCTCTCTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LEASSRPSSFIARYR*AHTPLIDTTPLSSA Trigger: AGCAGAAGAGAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAACCGGTACCTTGCTATGAAGGAAGATGGACGGCTGCTGGCTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS GCA 72 bp | TTCTGTCCAGGTCCCGTTTTGGATCCGAGTTTATACTaGCCAGTTCGTTTCAGTGCCACATACCAACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FCPGPVLDPSLY*PVRFSATYQLE Trigger: CTCCAGTTGGTATGTGGCACTGAAACGAACTGGGCAGTATAAACTCGGATCCAAAACGGGACCTGGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CAA 90 bp | CGTCCATCTTCCTTCATAGCAAGGTACCGGTTGGCACACACTCCCTaGATAGACACAACTCCTCTCTCTTCTGCTTGGAGTTGTAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPSSFIARYRLAHTP*IDTTPLSSAWSCSL Trigger: CAAACTACAACTCCAAGCAGAAGAGAGAGGAGTTGTGTCTATCAAGGGAGTGTGTGCCAACCGGTACCTTGCTATGAAGGAAGATGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 72 bp | GAAGAAACAGTATGGCCTTCTGTCCAGGTCCCGTTTTaGATCCGAGTTTATACTGCCCAGTTCGTTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EETVWPSVQVPF*IRVYTAQFVSV Trigger: CACTGAAACGAACTGGGCAGTATAAACTCGGATCCAAAACGGGACCTGGACAGAAGGCCATACTGTTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CAA 72 bp | GGAAGAAACAGTATGGCCTTCTGTCCAGGTCCCGTTTaGGATCCGAGTTTATACTGCCCAGTTCGTTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRNSMAFCPGPV*DPSLYCPVRFS Trigger: ACTGAAACGAACTGGGCAGTATAAACTCGGATCCAAAACGGGACCTGGACAGAAGGCCATACTGTTTCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS TCA 72 bp | TCGTTTCAGTGCCACATACCAACTGGAGTATTTCCGTaGCCGGTAAGTATTGTAGTTATTAGATTCCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFQCHIPTGVFP*PVSIVVIRFQS Trigger: CGACTGGAATCTAATAACTACAATACTTACCGGTCACGGAAATACTCCAGTTGGTATGTGGCACTGAAACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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| CDS CCA 72 bp | TATACTGCCCAGTTCGTTTCAGTGCCACATACCAACTaGAGTATTTCCGTGACCGGTAAGTATTGTAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: YTAQFVSVPHTN*SISVTGKYCSY Trigger: ATAACTACAATACTTACCGGTCACGGAAATACTCCAGTTGGTATGTGGCACTGAAACGAACTGGGCAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038885.10 ENSMUST00000091203.2 ENSMUST00000108120.8 ENSMUST00000138563.9 ENSMUST00000200585.5 |
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