Pregenerated sensors for FGF17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022101Ensembl transcript IDs: ENSMUST00000022697.7, ENSMUST00000227123.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTCTGCCGGGGTCTGCCTCTGGCCTCAAACCTGTTCCATAGAATaGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SSAGVCLWPQTCSIE*CPPWDTQVLSLPSG Trigger: CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCAGAGGCAGACCCCGGCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR GCA 90 bp | GCAGGCATTTTAGGTCAAGGAGACCCTATTTCTTCTGCCGGGGTCTaGCTCTGGCCTCAAACCTGTTCCATAGAATGGTGCCCACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: AGILGQGDPISSAGV*LWPQTCSIEWCPPW Trigger: CCAGGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCAGAGGCAGACCCCGGCAGAAGAAATAGGGTCTCCTTGACCTAAAATGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 90 bp | GTCTGCCTCTGGCCTCAAACCTGTTCCATAGAATGGTGCCCACCCTaGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGAAACTT | + |
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Preference number: 1 (lower is better) Translates to: VCLWPQTCSIEWCPP*DTQVLSLPSGDQKL Trigger: AAGTTTCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCAGAGGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 90 bp | AACAAAACCGTAAGTCCCTACGGTCTGGCCAAGAGTTTGGCTATTTaGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: NKTVSPYGLAKSLAI*FRFREVQGARFEHS Trigger: ACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAATAGCCAAACTCTTGGCCAGACCGTAGGGACTTACGGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATAGAATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGGCATCTACCCAGCCTaGCACACTACTGGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SIEWCPPWDTQVLSLPSGGIYPA*HTTGLP Trigger: AGGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCC...CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATAGAATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGGTCCTTTTGGAGACTaGCTCCCCACCTTCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SIEWCPPWDTQVLSLPSGGPFGD*LPTFLP Trigger: GGGGAGGAAGGTGGGGAGCCAGTCTCCAAAAGGACC...CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCAAGCTCTGGGTCCTTTTGGAGACTaGCTCCCCACCTTCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SDSERFREQDLSTVVQALGPFGD*LPTFLP Trigger: GGGGAGGAAGGTGGGGAGCCAGTCTCCAAAAGGACC...CAGAGCTTGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR TCA 90 bp | AATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGAGCCCCCATCTTTGGATaGGTTAGAGAAGAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: NGAHPGIHKYCLFPVGIRAPIFG*VREERE Trigger: TTCCCTCTCTTCTCTAACTCATCCAAAGATGGGGGC...TCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCAGGCATCTACCCAGCCTaGCACACTACTGGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: IWFRFREVQGARFEHSCAGIYPA*HTTGLP Trigger: AGGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCC...TGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCAAGCTCTGACCTGTTCCATAGAATaGTGCCCACCCTGGGATACA | + |
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Preference number: 2 (lower is better) Translates to: SDSERFREQDLSTVVQALTCSIE*CPPWDT Trigger: TGTATCCCAGGGTGGGCACCATTCTATGGAACAGGT...CAGAGCTTGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 72 bp | CAAGGAGACCCTATTTCTTCTGCCGGGGTCTGCCTCTaGCCTCAAACCTGTTCCATAGAATGGTGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: QGDPISSAGVCL*PQTCSIEWCPP Trigger: GGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCAGAGGCAGACCCCGGCAGAAGAAATAGGGTCTCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR CAA 90 bp | TCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCAAGCTCTGGCCCTCGGGGTCCTTTaGGAGACTGGCTCCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: SDSERFREQDLSTVVQALALGVL*ETGSPP Trigger: AGGTGGGGAGCCAGTCTCCAAAAGGACCCCGAGGGC...CAGAGCTTGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 72 bp | CCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTaGGGATCAGAAACTTCATGCCCTCGGGGTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: PTLGYTSTVSSQ*GSETSCPRGPF Trigger: AAAAGGACCCCGAGGGCATGAAGTTTCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| 3UTR CCA 72 bp | GGGGTCTGCCTCTGGCCTCAAACCTGTTCCATAGAATaGTGCCCACCCTGGGATACACAAGTACTGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GVCLWPQTCSIE*CPPWDTQVLSL Trigger: AAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCAGAGGCAGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR CAA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCCCCCAGCCCCCATCTTaGGATGAGTTAGAGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: DAGLGREIRTVADWLLFLPQPPS*DELEKR Trigger: TCTCTTCTCTAACTCATCCAAAGATGGGGGCTGGGG...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 72 bp | TGGCCTCAAACCTGTTCCATAGAATGGTGCCCACCCTaGGATACACAAGTACTGTCTCTTCCCAGTGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: WPQTCSIEWCPP*DTQVLSLPSGD Trigger: ATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGAACAGGTTTGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| 3UTR-3UTR CAA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCTTCAGGGAGCAAGATTaGAGCACAGTTGTGCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: DAGLGREIRTVADWLLFLFREQD*STVVQA Trigger: AGCTTGCACAACTGTGCTCAAATCTTGCTCCCTGAA...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR-3UTR CAA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCCAAGAGTTTGGCTATTaGGTTCAGATTCAGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: DAGLGREIRTVADWLLFLQEFGY*VQIQRG Trigger: ACCTCTCTGAATCTGAACCAAATAGCCAAACTCTTG...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| 3UTR CCA 72 bp | GTAAGTCCCTACGGTCTGGCCAAGAGTTTGGCTATTTaGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: VSPYGLAKSLAI*FRFREVQGARF Trigger: AAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAATAGCCAAACTCTTGGCCAGACCGTAGGGACTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR TCA 90 bp | AGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTCCCAGATGCGACGTCCGGTaGCCTGCACGTGCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGKAAEGHLPSLAHYWPPRCDVR*PARACH Trigger: GTGGCAAGCACGTGCAGGTCACCGGACGTCGCATCT...GGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCTGCCGCCTGCTCAGCTaGTCGGTCATAGCGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGCRLLS*SVIAPW Trigger: CCAGGGCGCTATGACCGACCAGCTGAGCAGGCGGCA...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCAAGTGGGCCTCTCGCTaGTTCTGGCGGCTCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGKWASR*FWRLRE Trigger: CTCCCGGAGCCGCCAGAACCAGCGAGAGGCCCACTT...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCATGAACCAGCCCTCGTaGCGGGCGTTCTGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGMNQPS*RAFWKA Trigger: GGCCTTCCAGAACGCCCGGCACGAGGGCTGGTTCAT...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCTGCCATCCTCTGCGGTaGCAGAGATGCGACGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGCHPLR*QRCDVR Trigger: CCGGACGTCGCATCTCTGCCACCGCAGAGGATGGCA...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTCCCAGGCGCTTGATGAAGTaGGCCTCTCGCTGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGKAAEGHLPSLAHYWPPRRLMK*ASRWFW Trigger: CCAGAACCAGCGAGAGGCCCACTTCATCAAGCGCCT...GGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTCCCTCGGTCATAGCGCCCTaGTCCCTCACGTACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: RGKAAEGHLPSLAHYWPPSVIAP*SLTYCV Trigger: AACACAGTACGTGAGGGACCAGGGCGCTATGACCGA...GGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTTGTTGCCATCCTCTaGGGTGGCAGAGATGCGACG | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGLVAIL*GGRDAT Trigger: CGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAG...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR TCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGAGATGCGACGTCCGGTaGCCTGCACGTGCTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLRCDVR*PARACH Trigger: GTGGCAAGCACGTGCAGGTCACCGGACGTCGCATCT...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCTGGTATTCACGGATTTaGCGCCTGCTCAGCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGWYSRI*RLLSWS Trigger: CGACCAGCTGAGCAGGCGGCAAATCCGTGAATACCA...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGCGACGTCCGGTGACCTaGACGTGCTTGCCACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLRRPVT*TCLPLV Trigger: GACCAGTGGCAAGCACGTGCAGGTCACCGGACGTCG...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCTCGGTCATAGCGCCCTaGTCCCTCACGTACTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGSVIAP*SLTYWL Trigger: TAACCAGTACGTGAGGGACCAGGGCGCTATGACCGA...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCGCCTTTCAGCGTGGTTaGGAAAAGGCAGCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGAFQRG*EKAAGL Trigger: AAGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGC...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTCCCAATTCGAACTGCTTCTaGCTTTCAGCGTGGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGKAAEGHLPSLAHYWPPNSNCF*LSAWLG Trigger: TCCCAACCACGCTGAAAGGCAGAAGCAGTTCGAATT...GGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | TCCATAGAATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGTGCCATCCTCTGCGGTaGCAGAGATGCGACGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SIEWCPPWDTQVLSLPSGCHPLR*QRCDVR Trigger: CCGGACGTCGCATCTCTGCCACCGCAGAGGATGGCA...CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCTTGGTCCTGCGAGTaGGGGCGGAGCCCACAAATT | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLAWSCE*GRSPQI Trigger: AATTTGTGGGCTCCGCCCCCACTCGCAGGACCAAGC...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGCTTGTTGCCATCCTCTaGGGTGGCAGAGATGCGACG | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLLVAIL*GGRDAT Trigger: CGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAG...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AGCCCGCTTATTTCAGGTAGACGCTGGGAAGCAGGCATTTTAGGTCAAGGAGACATGAACCAGCCCTCGTaGCGGGCGTTCTGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPLISGRRWEAGILGQGDMNQPS*RAFWKA Trigger: GGCCTTCCAGAACGCCCGGCACGAGGGCTGGTTCAT...GTCTCCTTGACCTAAAATGCCTGCTTCCCAGCGTCTACCTGAAATAAGCGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCGCTTCCCAATCAGCTTaGCCCTCTTGTTCATACAGA | + |
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Preference number: 4 (lower is better) Translates to: RREGRLLRGIYPAWHTTGASQSA*PSCSYR Trigger: TCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGC...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCCTTTCAGCGTGGTTaGGAAAAGGCAGCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLAFQRG*EKAAGL Trigger: AAGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGC...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR TCA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGCCAGTACGATCTCGGTaGACACGCAGTCTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LDELEKRGKAAEGHLPSLPVRSR*TRSLCS Trigger: AGAGCAAAGACTGCGTGTTCACCGAGATCGTACTGG...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | CCATCTTTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCTGGTATTCACGGATTTaGCGCCTGCTCAGCTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PSLDELEKRGKAAEGHLPWYSRI*RLLSWS Trigger: CGACCAGCTGAGCAGGCGGCAAATCCGTGAATACCA...GGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR TCA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCCCAGTACGATCTCGGTaGACACGCAGTCTTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: DAGLGREIRTVADWLLFLPVRSR*TRSLCS Trigger: AGAGCAAAGACTGCGTGTTCACCGAGATCGTACTGG...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR GCA 90 bp | ATTTGGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCACCGGTGACCTGCACGTaGTTGCCACTGGTCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IWFRFREVQGARFEHSCAPVTCT*LPLVRL Trigger: CAGCCGGACCAGTGGCAAGCACGTGCAGGTCACCGG...TGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR GCA 90 bp | AATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGAGCTTCCCAATCAGCTTaGCCCTCTTGTTCATACAGA | + |
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Preference number: 4 (lower is better) Translates to: NGAHPGIHKYCLFPVGIRASQSA*PSCSYR Trigger: TCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGC...TCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | AATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGAAATTCGAACTGCTTCTaGCTTTCAGCGTGGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NGAHPGIHKYCLFPVGIRNSNCF*LSAWLG Trigger: TCCCAACCACGCTGAAAGGCAGAAGCAGTTCGAATT...TCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CCA 90 bp | ATTTGGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCAGCTTGGTCCTGCGAGTaGGGGCGGAGCCCACAAATT | + |
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Preference number: 4 (lower is better) Translates to: IWFRFREVQGARFEHSCAAWSCE*GRSPQI Trigger: AATTTGTGGGCTCCGCCCCCACTCGCAGGACCAAGC...TGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR GCA 90 bp | AATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGACAGAGAATCAATAGCTaGAAGCACAGGGTAAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: NGAHPGIHKYCLFPVGIRQRINS*KHRVRL Trigger: TAACCTTACCCTGTGCTTGCAGCTATTGATTCTCTG...TCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR GCA 90 bp | ATTTGGTTCAGATTCAGAGAGGTTCAGGGAGCAAGATTTGAGCACAGTTGTGCACAGAGAATCAATAGCTaGAAGCACAGGGTAAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: IWFRFREVQGARFEHSCAQRINS*KHRVRL Trigger: TAACCTTACCCTGTGCTTGCAGCTATTGATTCTCTG...TGCACAACTGTGCTCAAATCTTGCTCCCTGAACCTCTCTGAATCTGAACCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR CAA 90 bp | AGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCCTCCCTCGCTCTCTGCCCCCTaGATGCGGACTCTGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: RGKAAEGHLPSLAHYWPPSLSAP*MRTLLP Trigger: CGGCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCGA...GGGAGGCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS GCA 90 bp | GTGCGCTTGGTCCTGCGAGTGGGGGCGGAGCCCACAAATTCGAACTaGTTCTGCCTTTCAGCGTGGTTGGGAAAAGGCAGCTGGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VRLVLRVGAEPTNSN*FCLSAWLGKGSWPW Trigger: CCAAGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGCAGAAGCAGTTCGAATTTGTGGGCTCCGCCCCCACTCGCAGGACCAAGCGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCTGCCTTTCAGCGTGGTaGGGAAAAGGCAGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RREGRLLRGIYPAWHTTGCLSAW*GKGSWP Trigger: AGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGCA...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS GCA 90 bp | TGTATCTGTCTCCACGATGAGCTTGGCGAACTTGTTGCCATCCTCTaGGGTGGCAGAGATGCGACGTCCGGTGACCTGCACGTGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: CICLHDELGELVAIL*GGRDATSGDLHVLA Trigger: GGCAAGCACGTGCAGGTCACCGGACGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAGTTCGCCAAGCTCATCGTGGAGACAGATACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCTCGCTCTCTGCCCCCTaGATGCGGACTCTGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: DAGLGREIRTVADWLLFLSLSAP*MRTLLP Trigger: CGGCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCGA...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGCACACTACTGGCGGCTTCCCAATCAGCTaGCCCCTCTTGTTCATACAG | + |
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Preference number: 5 (lower is better) Translates to: RREGRLLRGIYPAWHTTGGFPIS*PLLFIQ Trigger: CTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCC...GCCAGTAGTGTGCCAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | TCCATAGAATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGCTGGTATTCACGGATTaGCCGCCTGCTCAGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SIEWCPPWDTQVLSLPSGLVFTD*PPAQLV Trigger: GACCAGCTGAGCAGGCGGCAAATCCGTGAATACCAG...CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | GACGCAGGCCTGGGGCGAGAAATAAGAACAGTGGCTGACTGGCTTTTGTTTCTCGTGAACACGCAGTCTTaGCTCTTCCCGCTCGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: DAGLGREIRTVADWLLFLVNTQS*LFPLGF Trigger: GAAGCCGAGCGGGAAGAGCAAAGACTGCGTGTTCAC...GAGAAACAAAAGCCAGTCAGCCACTGTTCTTATTTCTCGCCCCAGGCCTGCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS-3UTR CAA 90 bp | CCATCTTTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCGTGAACACGCAGTCTTaGCTCTTCCCGCTCGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSLDELEKRGKAAEGHLPVNTQS*LFPLGF Trigger: GAAGCCGAGCGGGAAGAGCAAAGACTGCGTGTTCAC...GGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | TCCATAGAATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGTGCCTTTCAGCGTGGTaGGGAAAAGGCAGCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SIEWCPPWDTQVLSLPSGCLSAW*GKGSWP Trigger: AGGCCAGCTGCCTTTTCCCAACCACGCTGAAAGGCA...CCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATTCTATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGGGCTTCCCAATCAGCTaGCCCCTCTTGTTCATACAG | + |
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Preference number: 5 (lower is better) Translates to: LDELEKRGKAAEGHLPSLGFPIS*PLLFIQ Trigger: CTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCC...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | TTGGATGAGTTAGAGAAGAGAGGGAAGGCTGCTGAGGGGCATCTACCCAGCCTGATCAGCTTGCCCCTCTaGTTCATACAGATGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: LDELEKRGKAAEGHLPSLISLPL*FIQMYF Trigger: GAAGTACATCTGTATGAACAAGAGGGGCAAGCTGAT...CAGGCTGGGTAGATGCCCCTCAGCAGCCTTCCCTCTCTTCTCTAACTCATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS-3UTR CAA 90 bp | AATGGTGCCCACCCTGGGATACACAAGTACTGTCTCTTCCCAGTGGGGATCAGAATCAGCTTGCCCCTCTaGTTCATACAGATGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: NGAHPGIHKYCLFPVGIRISLPL*FIQMYF Trigger: GAAGTACATCTGTATGAACAAGAGGGGCAAGCTGAT...TCTGATCCCCACTGGGAAGAGACAGTACTTGTGTATCCCAGGGTGGGCACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS GCA 72 bp | CTCCACGATGAGCTTGGCGAACTTGTTGCCATCCTCTaGGGTGGCAGAGATGCGACGTCCGGTGACCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LHDELGELVAIL*GGRDATSGDLH Trigger: GTGCAGGTCACCGGACGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAGTTCGCCAAGCTCATCGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS GCA 72 bp | GTCCTGCGAGTGGGGGCGGAGCCCACAAATTCGAACTaGTTCTGCCTTTCAGCGTGGTTGGGAAAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLRVGAEPTNSN*FCLSAWLGKGS Trigger: GCTGCCTTTTCCCAACCACGCTGAAAGGCAGAAGCAGTTCGAATTTGTGGGCTCCGCCCCCACTCGCAGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CCA 72 bp | ATTTGCCGCCTGCTCAGCTGGTCGGTCATAGCGCCCTaGTCCCTCACGTACTGGTTAAAATTAGGAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: ICRLLSWSVIAP*SLTYWLKLGDG Trigger: CCCGTCTCCTAATTTTAACCAGTACGTGAGGGACCAGGGCGCTATGACCGACCAGCTGAGCAGGCGGCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022697.7 |
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| CDS CAA 72 bp | CTCTTCCCGCTCGGCTTCCCAATCAGCTTGCCCCTCTaGTTCATACAGATGTACTTCTCGCTCTCTGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LFPLGFPISLPL*FIQMYFSLSAP Trigger: GGGGGCAGAGAGCGAGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCCGAGCGGGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CAA 90 bp | CAGTCTTTGCTCTTCCCGCTCGGCTTCCCAATCAGCTTGCCCCTCTaGTTCATACAGATGTACTTCTCGCTCTCTGCCCCCTTGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: QSLLFPLGFPISLPL*FIQMYFSLSAPLMR Trigger: CCGCATCAAGGGGGCAGAGAGCGAGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCCGAGCGGGAAGAGCAAAGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CAA 72 bp | AATGTATCTGTCTCCACGATGAGCTTGGCGAACTTGTaGCCATCCTCTGCGGTGGCAGAGATGCGACGTCCG | + |
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Preference number: 6 (lower is better) Translates to: NVSVSTMSLANL*PSSAVAEMRRP Trigger: CGGACGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAGTTCGCCAAGCTCATCGTGGAGACAGATACATT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CAA 72 bp | CCGAATGTATCTGTCTCCACGATGAGCTTGGCGAACTaGTTGCCATCCTCTGCGGTGGCAGAGATGCGACGT | + |
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Preference number: 6 (lower is better) Translates to: PNVSVSTMSLAN*LPSSAVAEMRR Trigger: ACGTCGCATCTCTGCCACCGCAGAGGATGGCAACAAGTTCGCCAAGCTCATCGTGGAGACAGATACATTCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CAA 72 bp | CAGTCTTTGCTCTTCCCGCTCGGCTTCCCAATCAGCTaGCCCCTCTTGTTCATACAGATGTACTTCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSLLFPLGFPIS*PLLFIQMYFSL Trigger: GAGCGAGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCCGAGCGGGAAGAGCAAAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS TCA 72 bp | TGTTCATACAGATGTACTTCTCGCTCTCTGCCCCCTTaGTGCGGACTCTGCTGCCGAATGTATCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CSYRCTSRSLPP*CGLCCRMYLSP Trigger: TGGAGACAGATACATTCGGCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCGAGAAGTACATCTGTATGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS GCA 72 bp | AGTCTTTGCTCTTCCCGCTCGGCTTCCCAATCAGCTTaGCCCTCTTGTTCATACAGATGTACTTCTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLCSSRSASQSA*PSCSYRCTSRS Trigger: AGAGCGAGAAGTACATCTGTATGAACAAGAGGGGCAAGCTGATTGGGAAGCCGAGCGGGAAGAGCAAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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| CDS CAA 72 bp | TTGTTCATACAGATGTACTTCTCGCTCTCTGCCCCCTaGATGCGGACTCTGCTGCCGAATGTATCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFIQMYFSLSAP*MRTLLPNVSVS Trigger: GGAGACAGATACATTCGGCAGCAGAGTCCGCATCAAGGGGGCAGAGAGCGAGAAGTACATCTGTATGAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022697.7 ENSMUST00000227123.2 |
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