Pregenerated sensors for FGF14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025551Ensembl transcript IDs: ENSMUST00000026631.6, ENSMUST00000095529.10
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGCATTGCTGCTGCAGGAAAGAACACAACAGCCGCCTTGCCCATaGTTTGCTGAGGATGAGGATAACTGGAATGCAGCCCAAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: CALLLQERTQQPPCP*FAEDEDNWNAAQIR Trigger: CCTGATTTGGGCTGCATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 90 bp | CTAACGTGTGCATTGCTGCTGCAGGAAAGAACACAACAGCCGCCTTaGCCATGCTTTGCTGAGGATGAGGATAACTGGAATGCAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: LTCALLLQERTQQPP*PCFAEDEDNWNAAQ Trigger: TTGGGCTGCATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGCACACGTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR TCA 90 bp | AGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGGTTaGGATTTATCCACTTGCAAAGAAGGAGGTCTGAGACAGCATAAG | + |
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Preference number: 1 (lower is better) Translates to: SWFVQVSSWCRGTTG*DLSTCKEGGLRQHK Trigger: CTTATGCTGTCTCAGACCTCCTTCTTTGCAAGTGGATAAATCTCAACCTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 90 bp | CTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGTGGGTCTTaGTCGCTGGGCAAGGCAAATGTTACCATTACCAGTAAGCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LQNSLDPLSQKLSGS*SLGKANVTITSKLV Trigger: CACAAGCTTACTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CCA 90 bp | ATTTCAGTGTACAGTAAGTACAGTGTAGATGGGGACAATGGCAAGTaGATCATCCTGCCACATGGAAATAACAAGGCCAGTACATTGATC | + |
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Preference number: 1 (lower is better) Translates to: ISVYSKYSVDGDNGK*IILPHGNNKASTLI Trigger: GATCAATGTACTGGCCTTGTTATTTCCATGTGGCAGGATGATCCACTTGCCATTGTCCCCATCTACACTGTACTTACTGTACACTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAACATCAGCTTGCTTGCTaGGGCTTTTCCGCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKHQLAC*GFSATG Trigger: TCCTGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATG...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CAA 90 bp | CATTGCTGCTGCAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTaGCTGAGGATGAGGATAACTGGAATGCAGCCCAAATCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HCCCRKEHNSRLAHA*LRMRITGMQPKSGV Trigger: CACACCTGATTTGGGCTGCATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCAGCAGCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR GCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCAAGCATCAGCTTGCTTaGTGGGGCTTTTCCGCCACA | + |
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Preference number: 2 (lower is better) Translates to: RFRATQSLLKVTDSGASSKHQLA*WGFSAT Trigger: TGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATGCTT...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CAA 90 bp | ACTTGCAAAGAAGGAGGTCTGAGACAGCATAAGACAAGCATCAGCTaGCTTGCTGGGGCTTTTCCGCCACAGGAGCAGGAATGTCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: TCKEGGLRQHKTSIS*LAGAFPPQEQECLV Trigger: TACTAGACATTCCTGCTCCTGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATGCTTGTCTTATGCTGTCTCAGACCTCCTTCTTTGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CAA 90 bp | CATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTGGTTaGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGGTTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: HSISGRAFHGLSLAG*SRCLLGVGGPQVEI Trigger: AATCTCAACCTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACTTCTCAAAAACTAAGTaGGTCTTGCTCGCTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: QERTQQPPCPCFAEDEDNFSKTK*VLLAGQ Trigger: TTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAA...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR TCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCACACATGGATTTCGCTaGAACAGGACTCAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RFRATQSLLKVTDSGASSTHGFR*NRTQKG Trigger: TCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGT...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACACACATGGATTTCGCTaGAACAGGACTCAAAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QERTQQPPCPCFAEDEDNTHGFR*NRTQKG Trigger: TCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGT...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAACCTTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCTCCATGGATTGTGTTTaGCCCTTGTTCCACCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: MNLNQAYKAYRILWTHFLSMDCV*PLFHPG Trigger: GCCTGGGTGGAACAAGGGTCAAACACAATCCATGGA...GAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAAGGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGGTCCAGGTGTCTTCTTaGTGTAGGGGGACCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKVQVSS*CRGTTG Trigger: ACCTGTGGTCCCCCTACACCAAGAAGACACCTGGAC...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCACTCAAAAAGGATTATaGGTAGCTGTCAGCAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RFRATQSLLKVTDSGASSTQKGL*VAVSRQ Trigger: TTGCCTGCTGACAGCTACCCATAATCCTTTTTGAGT...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTCATCAGCTTGCTTGCTaGGGCTTTTCCGCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: ILKRHSISGRAFHGLSLAHQLAC*GFSATG Trigger: TCCTGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATG...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | CAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGGAGTTGAACTTAAACACATaGATTTCGCTGAAACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QSLLKVTDSGASSPVKMELNLNT*ISLKQD Trigger: GTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAA...CTCCATTTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTAAGCATCAGCTTGCTTaGTGGGGCTTTTCCGCCACA | + |
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Preference number: 2 (lower is better) Translates to: EKILKRHSISGRAFHGLSKHQLA*WGFSAT Trigger: TGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATGCTT...ACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATATCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTTTAAGGTGCATCTCCAGCAATTCACAGCCTTTCTAAGTATCCCTAAATTCTCAAAAACTAAGTaGGTCTTGCTCGCTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EIFKVHLQQFTAFLSIPKFSKTK*VLLAGQ Trigger: TTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAA...TTTAGGGATACTTAGAAAGGCTGTGAATTGCTGGAGATGCACCTTAAAGATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR GCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTGAAACTAAGAGGGAATaGCAAACACCTATCATAGAG | + |
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Preference number: 2 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTETKRE*QTPIIE Trigger: CTCTATGATAGGTGTTTGGCATTCCCTCTTAGTTTC...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGTGGTCTGAGTTTAGCTaGTTTGTCCAGGTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IELKHMDFAETGLKKDYGWSEFS*FVQVSS Trigger: AGAAGACACCTGGACAAACCAGCTAAACTCAGACCA...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CAA 90 bp | CTGCCACATGGAAATAACAAGGCCAGTACATTGATCCTACATCAGTaGTTTCTTATAAAAGAGGTTCAGTTTGGTCTCAATGAATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPHGNNKASTLILHQ*FLIKEVQFGLNEFF Trigger: GAAGAATTCATTGAGACCAAACTGAACCTCTTTTATAAGAAACAACTGATGTAGGATCAATGTACTGGCCTTGTTATTTCCATGTGGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 72 bp | CTGCTGCAGGAAAGAACACAACAGCCGCCTTGCCCATaGTTTGCTGAGGATGAGGATAACTGGAATGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: LLQERTQQPPCP*FAEDEDNWNAA Trigger: GGCTGCATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACAAGACAAGCATCAGCTaGCTTGCTGGGGCTTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: QERTQQPPCPCFAEDEDNKTSIS*LAGAFP Trigger: CGGAAAAGCCCCAGCAAGCAAGCTGATGCTTGTCTT...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR TCA 72 bp | AACACCTATCATAGAGAGCTTTCCATGGATTGTGTTTaGCCCTTGTTCCACCCAGGCCATGCCTACCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: NTYHRELSMDCV*PLFHPGHAYLG Trigger: CCCGAGGTAGGCATGGCCTGGGTGGAACAAGGGTCAAACACAATCCATGGAAAGCTCTCTATGATAGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 72 bp | GCATTGCTGCTGCAGGAAAGAACACAACAGCCGCCTTaGCCATGCTTTGCTGAGGATGAGGATAACTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ALLLQERTQQPP*PCFAEDEDNWN Trigger: ATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCAGCAGCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR TCA 72 bp | GTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGGTTaGGATTTATCCACTTGCAAAGAAGGAGGTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: VQVSSWCRGTTG*DLSTCKEGGLR Trigger: TCTCAGACCTCCTTCTTTGCAAGTGGATAAATCTCAACCTGTGGTCCCCCTACACCAAGAAGACACCTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CCA 72 bp | CAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTaGAGCGAGCAGCCCTGTAAAAATGGAGAGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QSNTIPAKGHRQ*SEQPCKNGEKR Trigger: TCTCTTCTCTCCATTTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACAGAGCTTTCCATGGATaGTGTTTGACCCTTGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: QERTQQPPCPCFAEDEDNRAFHG*CLTLVP Trigger: TGGAACAAGGGTCAAACACAATCCATGGAAAGCTCT...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACAAACCAACTGCAACATaGAAGATTCAGAGCAACACA | + |
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Preference number: 3 (lower is better) Translates to: QERTQQPPCPCFAEDEDNKPTAT*KIQSNT Trigger: TGTGTTGCTCTGAATCTTCAATGTTGCAGTTGGTTT...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | ATGAACCTTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCCTGAGTTTAGCTGGTTaGTCCAGGTGTCTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: MNLNQAYKAYRILWTHFLLSLAG*SRCLLG Trigger: ACCAAGAAGACACCTGGACAAACCAGCTAAACTCAG...GAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAAGGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR TCA 72 bp | CAGGTTGAGATTTATCCACTTGCAAAGAAGGAGGTCTaGGACAGCATAAGACAAGCATCAGCTTGCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: QVEIYPLAKKEV*DSIRQASACLL Trigger: CAGCAAGCAAGCTGATGCTTGTCTTATGCTGTCTCAGACCTCCTTCTTTGCAAGTGGATAAATCTCAACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 72 bp | TCTTTGGACCCACTTTCTCAAAAACTAAGTGGGTCTTaGTCGCTGGGCAAGGCAAATGTTACCATTACCAGT | + |
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Preference number: 3 (lower is better) Translates to: SLDPLSQKLSGS*SLGKANVTITS Trigger: ACTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAAAGTGGGTCCAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR CCA 72 bp | TACAGTAAGTACAGTGTAGATGGGGACAATGGCAAGTaGATCATCCTGCCACATGGAAATAACAAGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: YSKYSVDGDNGK*IILPHGNNKAS Trigger: ACTGGCCTTGTTATTTCCATGTGGCAGGATGATCCACTTGCCATTGTCCCCATCTACACTGTACTTACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR GCA 72 bp | TCAAAAACAGAAAGACAGGTTGGTTTGGGATGTGTGTaGATGTGTAGGGGTATAAGCTGTGTCTACAAACCC | + |
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Preference number: 3 (lower is better) Translates to: SKTERQVGLGCV*MCRGISCVYKP Trigger: GGGTTTGTAGACACAGCTTATACCCCTACACATGCACACACATCCCAAACCAACCTGTCTTTCTGTTTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
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| 3UTR CCA 72 bp | ACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGTaGGTCTTGCTCGCTGGGCAAGGCAAATGTTACCAT | + |
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Preference number: 3 (lower is better) Translates to: TEFFGPTFSKTK*VLLAGQGKCYH Trigger: ATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGAAGACAAGCATCAGCTaGCTTGCTGGGGCTTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: IELKHMDFAETGLKKDYGKTSIS*LAGAFP Trigger: CGGAAAAGCCCCAGCAAGCAAGCTGATGCTTGTCTT...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| 3UTR-3UTR CAA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGAAACCAACTGCAACATaGAAGATTCAGAGCAACACA | + |
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Preference number: 3 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKKPTAT*KIQSNT Trigger: TGTGTTGCTCTGAATCTTCAATGTTGCAGTTGGTTT...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS-3UTR GCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGGGCTGCTCCGCCTCCTaGTGGCAGAGGGCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQGCSAS*WQRAGP Trigger: GGGACCGGCCCTCTGCCAGCAGGAGGCGGAGCAGCC...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS-3UTR GCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAGGCCGGTCCCAGTGCTaGTCCCGCGCCTGCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKGRSQC*SRACRF Trigger: GAAACGGCAGGCGCGGGAGCAGCACTGGGACCGGCC...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS-3UTR CCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCTGCTCCGCCTCCTGCTaGCAGAGGGCCGGTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RFRATQSLLKVTDSGASSCSASC*QRAGPS Trigger: ACTGGGACCGGCCCTCTGCCAGCAGGAGGCGGAGCA...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS-3UTR TCA 90 bp | TTTTCCGCCACAGGAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCGCGCCTGCCGTTTCTaGCGGATCAAGCCGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: FSATGAGMSSKDKSLHCARACRF*RIKPLA Trigger: CGCCAGCGGCTTGATCCGTCAGAAACGGCAGGCGCG...AGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTCCTGTGGCGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS-3UTR TCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGTGGTCACTATGCCCTTaGGCTGGGGATCAGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQWSLCP*AGDQLG Trigger: ACCCAACTGATCCCCAGCTCAAGGGCATAGTGACCA...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
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| CDS-3UTR GCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGAAAGCCCGCGGTTCTTaGTGGGGCTGCTCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKKARGS*WGCSAS Trigger: GGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS-3UTR GCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAACCACCAGGTTGCCATTaGAAAGCCCGCGGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKPPGCH*KARGSC Trigger: GCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGG...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| 3UTR CAA 72 bp | GAAGGAGGTCTGAGACAGCATAAGACAAGCATCAGCTaGCTTGCTGGGGCTTTTCCGCCACAGGAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGGLRQHKTSIS*LAGAFPPQEQE Trigger: TTCCTGCTCCTGTGGCGGAAAAGCCCCAGCAAGCAAGCTGATGCTTGTCTTATGCTGTCTCAGACCTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGAACGCGCAGTCCCACTaGGATGAGGTTGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQNAQSH*DEVEQC Trigger: ACACTGTTCAACCTCATCCCAGTGGGACTGCGCGTT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| 3UTR CAA 72 bp | TCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTGGTTaGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRAFHGLSLAG*SRCLLGVGGPQ Trigger: CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACCATGGAATGCCCTACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGGAGGGCCGGTCCCAGTaGTGCTCCCGCGCCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IELKHMDFAETGLKKDYGEGRSQ*CSRACR Trigger: ACGGCAGGCGCGGGAGCAGCACTGGGACCGGCCCTC...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGTGGTGCTGTCATCCTTaGTTCCATCGAGAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQWCCHP*FHRELH Trigger: ATGGAGCTCTCGATGGAACCAAGGATGACAGCACCA...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGACTTGTACTTTTGCTTaGCGTCACCCCAGCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQTCTFA*RHPSFR Trigger: CCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGATGCACTTGTACTTTTaGTTGGCGTCACCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQMHLYF*LASPQL Trigger: AAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCAT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IELKHMDFAETGLKKDYGARGSC*GCSASC Trigger: GCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGC...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| 3UTR CAA 72 bp | TGCAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTaGCTGAGGATGAGGATAACTGGAATGCAGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRKEHNSRLAHA*LRMRITGMQPK Trigger: TTTGGGCTGCATTCCAGTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR TCA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGTGGTCACTATGCCCTTaGGCTGGGGATCTTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKWSLCP*AGDLGA Trigger: GGCGCCAAGATCCCCAGCTCAAGGGCATAGTGACCA...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR GCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGAGTAGTAGCCTTGCCTaGAATATAACCTGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQSSSLA*NITWSL Trigger: TAGTGACCAGGTTATATTGCAGGCAAGGCTACTACT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCTTGCCACAAAGACACTaGAGCATATGCGTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RFRATQSLLKVTDSGASSLPQRH*SICVPL Trigger: CAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAA...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTTTGAGCTGGGGATCTTaGCGCCGCAACCTGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTLSWGS*RRNLRF Trigger: GAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAA...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACGAAACCACATTGATTTaGGCGAAAAGCAACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QERTQQPPCPCFAEDEDNETTLI*AKSNPA Trigger: TGCTGGGTTGCTTTTCGCCCAAATCAATGTGGTTTC...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACCTTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAGATATCCACCAGGTTaGCATTGCAAAGCCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MNLNQAYKAYRILWTHFLRYPPG*HCKARG Trigger: ACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCT...GAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAAGGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGACTTGTACTTTTGCTTaGCGTCACCCCAGCTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKTCTFA*RHPSFR Trigger: CCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAGAGCTGGGGATCAGTTaGGTTCTTGTTTTTCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKELGIS*VLVFLK Trigger: CTTAAGAAAAACAAGAACCCAACTGATCCCCAGCTC...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR TCA 90 bp | GAAAAGATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTGCAACCTGCGCTTCTTaGGGCCGAAGATGCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EKILKRHSISGRAFHGLSATCAS*GRRCAL Trigger: AAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGC...ACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATATCTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTCCTGTCTTCACTCCCTaGATGGCAACAACGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTPVFTP*MATTRS Trigger: ACTGCGCGTTGTTGCCATCCAGGGAGTGAAGACAGG...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGAATGAGCTGCTGGTTTaGTTTTCTTTACTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQNELLV*FSLLCF Trigger: GAAACAGAGTAAAGAAAACCAAACCAGCAGCTCATT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGATGGTTCTCGGTACATaGCAACTTCCAATGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKMVLGT*QLPMAW Trigger: CCAAGCCATTGGAAGTTGCCATGTACCGAGAACCAT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | TTTTCCGCCACAGGAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTAACATCATGCAAGGATaGTTCTCGGTACATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSATGAGMSSKDKSLHCANIMQG*FSVHGN Trigger: GTTGCCATGTACCGAGAACCATCCTTGCATGATGTT...AGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTCCTGTGGCGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACCTTGCACTTGTTGACTaGTTTGCCTCCATTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QERTQQPPCPCFAEDEDNLALVD*FASIHY Trigger: ATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAG...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR TCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTACAGCATGGATaGGTAGATTACATAATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RFRATQSLLKVTDSGASSPVQHG*VDYIIV Trigger: AACTATTATGTAATCTACTCATCCATGCTGTACAGG...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGGTTTCACCAACATCATaGAAGGATGGTTCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKVSPTS*KDGSRY Trigger: GTACCGAGAACCATCCTTGCATGATGTTGGTGAAAC...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACCTTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCATGCACTTGTACTTTTaGTTGGCGTCACCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MNLNQAYKAYRILWTHFLMHLYF*LASPQL Trigger: AAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCAT...GAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAAGGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAGCCTCCATTCATTATTaGAGATGCACTTGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKASIHY*RCTCTF Trigger: AAAAGTACAAGTGCATCTGCAATAATGAATGGAGGC...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTTCTTCACTCCCTGGATaGCAACAACGCGCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKRHSISGRAFHGLSLASSLPG*QQRAVP Trigger: TGGGACTGCGCGTTGTTGCCATCCAGGGAGTGAAGA...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GAAATCTTTAAGGTGCATCTCCAGCAATTCACAGCCTTTCTAAGTATCCCTAAATCTTCACTCCCTGGATaGCAACAACGCGCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EIFKVHLQQFTAFLSIPKSSLPG*QQRAVP Trigger: TGGGACTGCGCGTTGTTGCCATCCAGGGAGTGAAGA...TTTAGGGATACTTAGAAAGGCTGTGAATTGCTGGAGATGCACCTTAAAGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACGTTGCCTGTACAGCATaGATGAGTAGATTACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QERTQQPPCPCFAEDEDNVACTA*MSRLHN Trigger: ATTATGTAATCTACTCATCCATGCTGTACAGGCAAC...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCAATGAGCTGCTGGTTTaGTTTTCTTTACTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFRATQSLLKVTDSGASSNELLV*FSLLCF Trigger: GAAACAGAGTAAAGAAAACCAAACCAGCAGCTCATT...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| 3UTR CAA 72 bp | TTCTTTGGACCCACTTTCTCAAAAACTAAGTGGGTCTaGCTCGCTGGGCAAGGCAAATGTTACCATTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFGPTFSKTKWV*LAGQGKCYHYQ Trigger: CTGGTAATGGTAACATTTGCCTTGCCCAGCGAGCAAGACCCACTTAGTTTTTGAGAAAGTGGGTCCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAATTCATTATTGCAGATaGACTTGTACTTTTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKIHYCR*TCTFAW Trigger: CCAAGCAAAAGTACAAGTGCATCTGCAATAATGAAT...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGCCTGTCTTCACTCCCTaGATGGCAACAACGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IELKHMDFAETGLKKDYGPVFTP*MATTRS Trigger: ACTGCGCGTTGTTGCCATCCAGGGAGTGAAGACAGG...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGACCTTCTCCATTCATTaGTATGTACAACCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKTFSIH*YVQPCL Trigger: AAGACAGGGTTGTACATAGCAATGAATGGAGAAGGT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGAACGCGCAGTCCCACTaGGATGAGGTTGAACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IELKHMDFAETGLKKDYGNAQSH*DEVEQC Trigger: ACACTGTTCAACCTCATCCCAGTGGGACTGCGCGTT...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGCTTGCACTTGTTGACTaGTTTGCCTCCATTCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKLALVD*FASIHY Trigger: ATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAG...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR TCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTCCAAAGAAACCACATTaGTTTGGGCGAAAAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTPKKPH*FGRKAT Trigger: GGTTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGG...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGAGTAGTAGCCTTGCCTaGAATATAACCTGGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKSSSLA*NITWSL Trigger: TAGTGACCAGGTTATATTGCAGGCAAGGCTACTACT...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGTGGTGCTGTCATCCTTaGTTCCATCGAGAGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IELKHMDFAETGLKKDYGWCCHP*FHRELH Trigger: ATGGAGCTCTCGATGGAACCAAGGATGACAGCACCA...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTATGGTTCTCGGTACATaGCAACTTCCAATGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKRHSISGRAFHGLSLAMVLGT*QLPMAW Trigger: CCAAGCCATTGGAAGTTGCCATGTACCGAGAACCAT...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAACATCATGCAAGGATaGTTCTCGGTACATGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTNIMQG*FSVHGN Trigger: GTTGCCATGTACCGAGAACCATCCTTGCATGATGTT...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGATTCATTATTGCAGATaGACTTGTACTTTTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQECLVRINRSTVLRTRKIHYCR*TCTFAW Trigger: CCAAGCAAAAGTACAAGTGCATCTGCAATAATGAAT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GAAAAGATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTAGACACTGCAGCATATaGGTTCCTTTGCTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: EKILKRHSISGRAFHGLSRHCSI*VPLLKM Trigger: CATTTTCAGCAAAGGAACGCATATGCTGCAGTGTCT...ACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATATCTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR TCA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTCCTGTACAGCATGGATaGGTAGATTACATAATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTPVQHG*VDYIIV Trigger: AACTATTATGTAATCTACTCATCCATGCTGTACAGG...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTACCTTCTCCATTCATTaGTATGTACAACCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKRHSISGRAFHGLSLATFSIH*YVQPCL Trigger: AAGACAGGGTTGTACATAGCAATGAATGGAGAAGGT...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR GCA 90 bp | GAAATCTTTAAGGTGCATCTCCAGCAATTCACAGCCTTTCTAAGTATCCCTAAAGCCTCCATTCATTATTaGAGATGCACTTGTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EIFKVHLQQFTAFLSIPKASIHY*RCTCTF Trigger: AAAAGTACAAGTGCATCTGCAATAATGAATGGAGGC...TTTAGGGATACTTAGAAAGGCTGTGAATTGCTGGAGATGCACCTTAAAGATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTGTTGCCTGTACAGCATaGATGAGTAGATTACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILKRHSISGRAFHGLSLAVACTA*MSRLHN Trigger: ATTATGTAATCTACTCATCCATGCTGTACAGGCAAC...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CCA 90 bp | GAAAAGATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTAAGAAGAGGCCCTTGTaGTTGCATAATAATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: EKILKRHSISGRAFHGLSKKRPL*LHNNNL Trigger: CAAGTTATTATTATGCAACCACAAGGGCCTCTTCTT...ACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATATCTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| 3UTR CAA 72 bp | GGAAATAACAAGGCCAGTACATTGATCCTACATCAGTaGTTTCTTATAAAAGAGGTTCAGTTTGGTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNNKASTLILHQ*FLIKEVQFGLN Trigger: ATTGAGACCAAACTGAACCTCTTTTATAAGAAACAACTGATGTAGGATCAATGTACTGGCCTTGTTATTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS CCA 90 bp | CATTGCAAAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTCCTGCTaGCAGAGGGCCGGTCCCAGTGCTGCTCCCGCGCCTGCCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCKARGSCWGCSASC*QRAGPSAAPAPAVS Trigger: AGAAACGGCAGGCGCGGGAGCAGCACTGGGACCGGCCCTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS CCA 90 bp | AGAAGATATCCACCAGGTTGCCATTGCAAAGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGCTGGCAGAGGGCCGGTCCCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRYPPGCHCKARGSC*GCSASCWQRAGPSA Trigger: AGCACTGGGACCGGCCCTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCTTGAGCTGGGGATCTaGGCGCCGCAACCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RFRATQSLLKVTDSGASSLELGI*APQPAL Trigger: AAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAAG...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS CCA 90 bp | CAACCCTGTCTTCACTCCCTGGATGGCAACAACGCGCAGTCCCACTaGGATGAGGTTGAACAGTGTGGAATTGGTGCTGTCATCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPCLHSLDGNNAQSH*DEVEQCGIGAVILG Trigger: ACCAAGGATGACAGCACCAATTCCACACTGTTCAACCTCATCCCAGTGGGACTGCGCGTTGTTGCCATCCAGGGAGTGAAGACAGGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | CAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGGAGTCCACCAGGTTGCCATaGCAAAGCCCGCGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSLLKVTDSGASSPVKMESTRLP*QSPRFL Trigger: CAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGA...CTCCATTTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAAGATATCCACCAGGTaGCCATTGCAAAGCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKKISTR*PLQSPR Trigger: CCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTT...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGTTGGTGCTGTCATCCTaGGTTCCATCGAGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQLVLSS*VPSRAP Trigger: TGGAGCTCTCGATGGAACCAAGGATGACAGCACCAA...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS GCA 90 bp | TTGCTTGGCGTCACCCCAGCTTTCGGGACTGTTTCACCAACATCATaGAAGGATGGTTCTCGGTACATGGCAACTTCCAATGGCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGVTPAFGTVSPTS*KDGSRYMATSNGLG Trigger: ACCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCCTTGCATGATGTTGGTGAAACAGTCCCGAAAGCTGGGGTGACGCCAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | CAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAATGGAGCACTTGTACTTTTGCTaGGCGTCACCCCAGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSLLKVTDSGASSPVKMEHLYFC*ASPQLS Trigger: CGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTG...CTCCATTTTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCACTTGTACTTTTGCTaGGCGTCACCCCAGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFRATQSLLKVTDSGASSHLYFC*ASPQLS Trigger: CGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTG...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTCAAAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKRHSISGRAFHGLSLAQSPRF*LGLLRL Trigger: GAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTG...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | GGTCTGAGTTTAGCTGGTTTGTCCAGGTGTCTTCTTGGTGTAGGGGGACCACAGAGAAACCACATTGATTaGGGCGAAAAGCAACCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLSLAGLSRCLLGVGGPQRNHID*GEKQPS Trigger: GCTGGGTTGCTTTTCGCCCAAATCAATGTGGTTTCT...CTGTGGTCCCCCTACACCAAGAAGACACCTGGACAAACCAGCTAAACTCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGCTGGTCACTATGCCCTaGAGCTGGGGATCTTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKLVTMP*SWGSWR Trigger: GCGCCAAGATCCCCAGCTCAAGGGCATAGTGACCAG...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAATATGTGGTCTTGCACTaGTTGACTGGTTTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKYVVLH*LTGLPP Trigger: TGGAGGCAAACCAGTCAACAAGTGCAAGACCACATA...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS GCA 90 bp | GGTCTTGCACTTGTTGACTGGTTTGCCTCCATTCATTATTGCAGATaGACTTGTACTTTTGCTTGGCGTCACCCCAGCTTTCGGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLALVDWFASIHYCR*TCTFAWRHPSFRDC Trigger: ACAGTCCCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCTTGAACAGTGTGGAATaGGTGCTGTCATCCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RFRATQSLLKVTDSGASSLNSVE*VLSSLV Trigger: AACCAAGGATGACAGCACCAATTCCACACTGTTCAA...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGCTGGTCACTATGCCCTaGAGCTGGGGATCAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKLVTMP*SWGSVG Trigger: CCCAACTGATCCCCAGCTCAAGGGCATAGTGACCAG...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS GCA 90 bp | CTATGTGGTCTTGCACTTGTTGACTGGTTTGCCTCCATTCATTATTaGAGATGCACTTGTACTTTTGCTTGGCGTCACCCCAGCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCGLALVDWFASIHY*RCTCTFAWRHPSFR Trigger: CCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAGACCACATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTTAAGGTGCATCTCCAGCAATTCACAGCCTTTCTAAGTATCCCTAAACGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: EIFKVHLQQFTAFLSIPKRNLRF*RPKMRT Trigger: AGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCG...TTTAGGGATACTTAGAAAGGCTGTGAATTGCTGGAGATGCACCTTAAAGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCTTATTGCAGATGCACTaGTACTTTTGCTTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFRATQSLLKVTDSGASSLLQMH*YFCLAS Trigger: TGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAA...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | AGATTCAGAGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCTCCAAAGAAACCACATaGATTTGGGCGAAAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RFRATQSLLKVTDSGASSSKETT*IWAKSN Trigger: GTTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGA...GCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCTCTGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | AGCAACACAATCCCTGCTAAAGGTCACAGACAGTGGAGCGAGCAGCCCTGTAAAAGAAAGAAGAGGCCCTaGTGGTTGCATAATAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNTIPAKGHRQWSEQPCKRKKRP*WLHNNN Trigger: GTTATTATTATGCAACCACAAGGGCCTCTTCTTTCT...TTTACAGGGCTGCTCGCTCCACTGTCTGTGACCTTTAGCAGGGATTGTGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAGAACACAACAGCCGCCTTGCCCATGCTTTGCTGAGGATGAGGATAACGGATCAGTTGGGTTCTaGTTTTTCTTAAGACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QERTQQPPCPCFAEDEDNGSVGF*FFLRLL Trigger: CAAGAGTCTTAAGAAAAACAAGAACCCAACTGATCC...GTTATCCTCATCCTCAGCAAAGCATGGGCAAGGCGGCTGTTGTGTTCTTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTGATGCACTTGTACTTTaGCTTGGCGTCACCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTDALVL*LGVTPA Trigger: AGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATC...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | TTTTCCGCCACAGGAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTTTTTTCTTAAGACTCTaGCCACAAAGACACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSATGAGMSSKDKSLHCAFFLRL*PQRHCS Trigger: GCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAA...AGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTCCTGTGGCGGAAAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | TTTTCCGCCACAGGAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTTGCCTCCATTCATTATaGCAGATGCACTTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSATGAGMSSKDKSLHCACLHSL*QMHLYF Trigger: AAAGTACAAGTGCATCTGCAATAATGAATGGAGGCA...AGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTCCTGTGGCGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGGATGCACTTGTACTTTaGCTTGGCGTCACCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IELKHMDFAETGLKKDYGDALVL*LGVTPA Trigger: AGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATC...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTTATGTGGTCTTGCACTaGTTGACTGGTTTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTYVVLH*LTGLPP Trigger: TGGAGGCAAACCAGTCAACAAGTGCAAGACCACATA...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAATGTCTAGTAAGGATAAATCGCTCCACTGTGCTCAGGACAAGAAAGACAGACTCTTTAAACTaGCATTCAGGGGTAAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EQECLVRINRSTVLRTRKTDSLN*HSGVKS Trigger: ACTTTTTACCCCTGAATGCAAGTTTAAAGAGTCTGT...CTTTCTTGTCCTGAGCACAGTGGAGCGATTTATCCTTACTAGACATTCCTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAAGTTATTGCAGATGCACTaGTACTTTTGCTTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRPTRPTEFFGPTFSKTKLLQMH*YFCLAS Trigger: TGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAA...CTTAGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATGAACCTTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCTGCCTCCATTCATTATaGCAGATGCACTTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MNLNQAYKAYRILWTHFLCLHSL*QMHLYF Trigger: AAAGTACAAGTGCATCTGCAATAATGAATGGAGGCA...GAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAAGGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTTTGAACAGTGTGGAATaGGTGCTGTCATCCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILKRHSISGRAFHGLSLALNSVE*VLSSLV Trigger: AACCAAGGATGACAGCACCAATTCCACACTGTTCAA...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | TTAATCAGGCCTACAAGGCCTACAGAATTCTTTGGACCCACTTTCTCAAAAACTAACCTTCTCCATTCATaGCTATGTACAACCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIRPTRPTEFFGPTFSKTNLLHS*LCTTLS Trigger: AGACAGGGTTGTACATAGCAATGAATGGAGAAGGTT...AGTTTTTGAGAAAGTGGGTCCAAAGAATTCTGTAGGCCTTGTAGGCCTGATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTCACTTGTTGACTGGTTaGCCTCCATTCATTATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ILKRHSISGRAFHGLSLAHLLTG*PPFIIA Trigger: TGCAATAATGAATGGAGGCAAACCAGTCAACAAGTG...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | GAAAAGATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTCACTTGTTGACTGGTTaGCCTCCATTCATTATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKILKRHSISGRAFHGLSHLLTG*PPFIIA Trigger: TGCAATAATGAATGGAGGCAAACCAGTCAACAAGTG...ACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATATCTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAACTTAAACACATGGATTTCGCTGAAACAGGACTCAAAAAGGATTATGGGAACCTTCTCCATTCATaGCTATGTACAACCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IELKHMDFAETGLKKDYGNLLHS*LCTTLS Trigger: AGACAGGGTTGTACATAGCAATGAATGGAGAAGGTT...CCCATAATCCTTTTTGAGTCCTGTTTCAGCGAAATCCATGTGTTTAAGTTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | GAAATCTTTAAGGTGCATCTCCAGCAATTCACAGCCTTTCTAAGTATCCCTAAAAGCATATGCGTTCCTTaGCTGAAAATGTTCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EIFKVHLQQFTAFLSIPKSICVP*LKMFQR Trigger: TCTTTGGAACATTTTCAGCAAAGGAACGCATATGCT...TTTAGGGATACTTAGAAAGGCTGTGAATTGCTGGAGATGCACCTTAAAGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAAAGGCATTCCATATCTGGTAGGGCATTCCATGGTCTGAGTTTAGCTACAGACTCTTTAAACTaGCATTCAGGGGTAAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKRHSISGRAFHGLSLATDSLN*HSGVKS Trigger: ACTTTTTACCCCTGAATGCAAGTTTAAAGAGTCTGT...AGCTAAACTCAGACCATGGAATGCCCTACCAGATATGGAATGCCTTTTTAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
||
| CDS CCA 72 bp | CCACCAGGTTGCCATTGCAAAGCCCGCGGTTCTTGCTaGGGCTGCTCCGCCTCCTGCTGGCAGAGGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPGCHCKARGSC*GCSASCWQRAG Trigger: ACCGGCCCTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 72 bp | ATATCCACCAGGTTGCCATTGCAAAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTCCTGCTGGCAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ISTRLPLQSPRF*LGLLRLLLAEG Trigger: GCCCTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 90 bp | TTAGAGAAGATATCCACCAGGTTGCCATTGCAAAGCCCGCGGTTCTaGCTGGGGCTGCTCCGCCTCCTGCTGGCAGAGGGCCGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LEKISTRLPLQSPRF*LGLLRLLLAEGRSQ Trigger: CTGGGACCGGCCCTCTGCCAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCTCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 90 bp | AGGCCGAAGATGCGCACTTTAGAGAAGATATCCACCAGGTTGCCATaGCAAAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RPKMRTLEKISTRLP*QSPRFLLGLLRLLL Trigger: CAGCAGGAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCTCTAAAGTGCGCATCTTCGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 90 bp | TTCTTGAGGCCGAAGATGCGCACTTTAGAGAAGATATCCACCAGGTaGCCATTGCAAAGCCCGCGGTTCTTGCTGGGGCTGCTCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLRPKMRTLEKISTR*PLQSPRFLLGLLRL Trigger: GAGGCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCTCTAAAGTGCGCATCTTCGGCCTCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 72 bp | ATGCGCACTTTAGAGAAGATATCCACCAGGTTGCCATaGCAAAGCCCGCGGTTCTTGCTGGGGCTGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: MRTLEKISTRLP*QSPRFLLGLLR Trigger: GCGGAGCAGCCCCAGCAAGAACCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCTCTAAAGTGCGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CAA 90 bp | ACTATGCCCTTGAGCTGGGGATCTTGGCGCCGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACTTTAGAGAAGATATCCACCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: TMPLSWGSWRRNLRF*RPKMRTLEKISTRL Trigger: CAACCTGGTGGATATCTTCTCTAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAAGGGCATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CCA 72 bp | CTTCACTCCCTGGATGGCAACAACGCGCAGTCCCACTaGGATGAGGTTGAACAGTGTGGAATTGGTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LHSLDGNNAQSH*DEVEQCGIGAV Trigger: GACAGCACCAATTCCACACTGTTCAACCTCATCCCAGTGGGACTGCGCGTTGTTGCCATCCAGGGAGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 72 bp | TTGAGCTGGGGATCTTGGCGCCGCAACCTGCGCTTCTaGAGGCCGAAGATGCGCACTTTAGAGAAGATATCC | + |
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Preference number: 6 (lower is better) Translates to: LSWGSWRRNLRF*RPKMRTLEKIS Trigger: GGATATCTTCTCTAAAGTGCGCATCTTCGGCCTCAAGAAGCGCAGGTTGCGGCGCCAAGATCCCCAGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026631.6 |
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| CDS CCA 72 bp | CCATTCATTGCTATGTACAACCCTGTCTTCACTCCCTaGATGGCAACAACGCGCAGTCCCACTGGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: PFIAMYNPVFTP*MATTRSPTGMR Trigger: CCTCATCCCAGTGGGACTGCGCGTTGTTGCCATCCAGGGAGTGAAGACAGGGTTGTACATAGCAATGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 72 bp | ATGAGGTTGAACAGTGTGGAATTGGTGCTGTCATCCTaGGTTCCATCGAGAGCTCCATCGGGGTGCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: MRLNSVELVLSS*VPSRAPSGCIC Trigger: GCAGATGCACCCCGATGGAGCTCTCGATGGAACCAAGGATGACAGCACCAATTCCACACTGTTCAACCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS GCA 72 bp | GTCACCCCAGCTTTCGGGACTGTTTCACCAACATCATaGAAGGATGGTTCTCGGTACATGGCAACTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: VTPAFGTVSPTS*KDGSRYMATSN Trigger: ATTGGAAGTTGCCATGTACCGAGAACCATCCTTGCATGATGTTGGTGAAACAGTCCCGAAAGCTGGGGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CCA 72 bp | AGCTTTCGGGACTGTTTCACCAACATCATGCAAGGATaGTTCTCGGTACATGGCAACTTCCAATGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SFRDCFTNIMQG*FSVHGNFQWLG Trigger: CCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCCTTGCATGATGTTGGTGAAACAGTCCCGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS GCA 72 bp | CTTGCCCTTCCTTATTTAATCCCAAAAACCAGGCTCTaGCAGACTCCTGTTGCCTGTACAGCATGGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: LALPYLIPKTRL*QTPVACTAWMS Trigger: ACTCATCCATGCTGTACAGGCAACAGGAGTCTGGCAGAGCCTGGTTTTTGGGATTAAATAAGGAAGGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS GCA 72 bp | TGCCTCCATTCATTATTGCAGATGCACTTGTACTTTTaGTTGGCGTCACCCCAGCTTTCGGGACTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: CLHSLLQMHLYF*LASPQLSGLFH Trigger: GTGAAACAGTCCCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 90 bp | TTGACTGGTTTGCCTCCATTCATTATTGCAGATGCACTTGTACTTTaGCTTGGCGTCACCCCAGCTTTCGGGACTGTTTCACCAACATCA | + |
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Preference number: 6 (lower is better) Translates to: LTGLPPFIIADALVL*LGVTPAFGTVSPTS Trigger: TGATGTTGGTGAAACAGTCCCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS GCA 72 bp | CTTGCACTTGTTGACTGGTTTGCCTCCATTCATTATTaGAGATGCACTTGTACTTTTGCTTGGCGTCACCCC | + |
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Preference number: 6 (lower is better) Translates to: LALVDWFASIHY*RCTCTFAWRHP Trigger: GGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAACAAGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 72 bp | TTGCCTCCATTCATTATTGCAGATGCACTTGTACTTTaGCTTGGCGTCACCCCAGCTTTCGGGACTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LPPFIIADALVL*LGVTPAFGTVS Trigger: TGAAACAGTCCCGAAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS GCA 72 bp | CTTGTTGACTGGTTTGCCTCCATTCATTATTGCAGATaGACTTGTACTTTTGCTTGGCGTCACCCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVDWFASIHYCR*TCTFAWRHPSF Trigger: AAAGCTGGGGTGACGCCAAGCAAAAGTACAAGTGCATCTGCAATAATGAATGGAGGCAAACCAGTCAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 72 bp | AAAGTTCTGATGGGTAGAGGTAACCTTCTCCATTCATaGCTATGTACAACCCTGTCTTCACTCCCTGGATGG | + |
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Preference number: 6 (lower is better) Translates to: KVLMGRGNLLHS*LCTTLSSLPGW Trigger: CCATCCAGGGAGTGAAGACAGGGTTGTACATAGCAATGAATGGAGAAGGTTACCTCTACCCATCAGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026631.6 ENSMUST00000095529.10 |
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| CDS CAA 72 bp | CCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAACCCAGCAGCTTAGACACCCTG | + |
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Preference number: 6 (lower is better) Translates to: PLLKMFQRNHID*GEKQPSSLDTL Trigger: CAGGGTGTCTAAGCTGCTGGGTTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
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| CDS CAA 90 bp | ATATGCGTTCCTTTGCTGAAAATGTTCCAAAGAAACCACATTGATTaGGGCGAAAAGCAACCCAGCAGCTTAGACACCCTGAGAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ICVPLLKMFQRNHID*GEKQPSSLDTLRKK Trigger: CTTCTTTCTCAGGGTGTCTAAGCTGCTGGGTTGCTTTTCGCCCAAATCAATGTGGTTTCTTTGGAACATTTTCAGCAAAGGAACGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
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| CDS GCA 72 bp | TTCTTGTTTTTCTTAAGACTCTTGCCACAAAGACACTaGAGCATATGCGTTCCTTTGCTGAAAATGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FLFFLRLLPQRH*SICVPLLKMFQ Trigger: TTGGAACATTTTCAGCAAAGGAACGCATATGCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAACAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095529.10 |
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