Pregenerated sensors for FGF12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022523Ensembl transcript IDs: ENSMUST00000100024.3, ENSMUST00000231399.2, ENSMUST00000231717.2, ENSMUST00000232352.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATaGTTGAGTAAACATCTCACCGTAAACTCCAGGCACTTCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: CGFQKWHFLWTLSAL*LSKHLTVNSRHFPS Trigger: TGAAGGGAAGTGCCTGGAGTTTACGGTGAGATGTTTACTCAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 90 bp | TATCATGAAATCCTCAGAGAGATGGGCAATTGTGGTTTCCAGAAATaGCACTTCCTGTGGACCCTCAGTGCACTATGGTTGAGTAAACAT | + |
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Preference number: 1 (lower is better) Translates to: YHEILREMGNCGFQK*HFLWTLSALWLSKH Trigger: ATGTTTACTCAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGAGGATTTCATGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR GCA 90 bp | CTCCTGACCTTTCTGCTTTTTCTCTCTAAGGCTCAATTATACCCATaGACCTACCACACTGGGTTCAGTCACTATATGTCTAACATTATA | + |
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Preference number: 1 (lower is better) Translates to: LLTFLLFLSKAQLYP*TYHTGFSHYMSNII Trigger: TATAATGTTAGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTTAGAGAGAAAAAGCAGAAAGGTCAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR TCA 90 bp | CATCTAATGACTACTGGACATCTTTCAAGGCTCCTACCTTCTCATTaGGTGCATAGCCTCTCTGATATAGTGATTTTATTTTCTCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HLMTTGHLSRLLPSH*VHSLSDIVILFSLF Trigger: AAAGAGAGAAAATAAAATCACTATATCAGAGAGGCTATGCACTCAATGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CCA 90 bp | TCCACCAAAAACTGGGGCTTTGAGAATTATAACTTATTTATCACTTaGGTCCAAGAGTTAAATGCCATCATGTCTTGGAAGACCTTTATT | + |
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Preference number: 1 (lower is better) Translates to: STKNWGFENYNLFIT*VQELNAIMSWKTFI Trigger: AATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAAGTGATAAATAAGTTATAATTCTCAAAGCCCCAGTTTTTGGTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CCA 90 bp | AACTTATTTATCACTTGGGTCCAAGAGTTAAATGCCATCATGTCTTaGAAGACCTTTATTATTTCGGTGAACATTTATCACTCCAACAAG | + |
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Preference number: 1 (lower is better) Translates to: NLFITWVQELNAIMS*KTFIISVNIYHSNK Trigger: CTTGTTGGAGTGATAAATGTTCACCGAAATAATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAAGTGATAAATAAGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CAA 90 bp | GGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTaGAGTAAACATCTCACCGTAAACTCCAGGCACTTCCCTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GFQKWHFLWTLSALW*SKHLTVNSRHFPSK Trigger: TTTTGAAGGGAAGTGCCTGGAGTTTACGGTGAGATGTTTACTCAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCACTTCAAAAGAGCCTATaGTCCATTTTGTTGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SERWAIVVSRNGTSCGPSLQKSL*SILLKP Trigger: AGGCTTCAACAAAATGGATCATAGGCTCTTTTGAAG...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCGCAACAGGCAAGCTTTaGTTCAAATTTCTTGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: PSPDASEFPKSPQEYIKTATGKL*FKFLVL Trigger: TAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGC...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTAACACTCCTACCTTCTCATTaGGTGCATAGCCTCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LNYTHAPTTLGSVTICLTLLPSH*VHSLSD Trigger: ATCAGAGAGGCTATGCACTCAATGAGAAGGTAGGAG...TGTTAGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCAAGGAAGATTTTGAGTaGAGAATCTCAGCTACTAAG | + |
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Preference number: 2 (lower is better) Translates to: PSPDASEFPKSPQEYIKTKEDFE*RISATK Trigger: CTTAGTAGCTGAGATTCTGCACTCAAAATCTTCCTT...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCACTACACACAGAACTGTaGCAATGTAAAAAGGCAATT | + |
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Preference number: 2 (lower is better) Translates to: SERWAIVVSRNGTSCGPSLHTEL*QCKKAI Trigger: AATTGCCTTTTTACATTGCCACAGTTCTGTGTGTAG...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCAACGTGAAACAAATCTaGACATTTCAGAATGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: PSPDASEFPKSPQEYIKTNVKQI*TFQNAL Trigger: TAGAGCATTCTGAAATGTGCAGATTTGTTTCACGTT...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTTCATCTAATGACTACTaGACATCTTTCAAGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSSSNDY*TSFKAP Trigger: AGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGA...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTAACAGGCATACACTATGCGCCTCTGATTCTCTTCTTTCTCTTTTGAGGAACTATTTGTGCTTTTaGACTTGTCCACTCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MFNRHTLCASDSLLSLLRNYLCF*TCPLCC Trigger: GCAGCAGAGTGGACAAGTTCAAAAGCACAAATAGTT...CCTCAAAAGAGAAAGAAGAGAATCAGAGGCGCATAGTGTATGCCTGTTAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTGACTGAATCACAAACCATTGGGTGGATGTTTAACAGGCATACACTATGCTCAACATTCAACTCCTaGCCTTTCTGCTTTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: NLTESQTIGWMFNRHTLCSTFNS*PFCFFS Trigger: AGAGAAAAAGCAGAAAGGTCAGGAGTTGAATGTTGA...GCATAGTGTATGCCTGTTAAACATCCACCCAATGGTTTGTGATTCAGTCAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTAATGCCATCATGTCTTaGAAGACCTTTATTATTTCG | + |
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Preference number: 2 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSNAIMS*KTFIIS Trigger: CGAAATAATAAAGGTCTTCCAAGACATGATGGCATT...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CAA 90 bp | GAATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTaGTCCTACACAAAGGAAGATTTTGAGTGCAGAATCTCAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: EFSTTLQQASFGSNF*SYTKEDFECRISAT Trigger: AGTAGCTGAGATTCTGCACTCAAAATCTTCCTTTGTGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CAA 90 bp | ATTGTTATGCATGTGAATTTTCTACCACATTGCAACAGGCAAGCTTaGGTTCAAATTTCTTGTCCTACACAAAGGAAGATTTTGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: IVMHVNFLPHCNRQA*VQISCPTQRKILSA Trigger: TGCACTCAAAATCTTCCTTTGTGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATTCACATGCATAACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGTTTACATCCATTCAATaGCTGTGCTTTGTCTGCATT | + |
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Preference number: 2 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLFTSIQ*LCFVCI Trigger: AATGCAGACAAAGCACAGTCATTGAATGGATGTAAA...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR GCA 72 bp | CACTCAAAGATACCTACACTAAGACTGCATGGAAAATaGAAGAAGCCTGTGCTCCTTCACCGGATGCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: HSKIPTLRLHGK*KKPVLLHRMPA Trigger: CGCTGGCATCCGGTGAAGGAGCACAGGCTTCTTGCATTTTCCATGCAGTCTTAGTGTAGGTATCTTTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | CAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATaGTTGAGTAAACATCTCACCGTAAACTCCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: QKWHFLWTLSAL*LSKHLTVNSRH Trigger: GTGCCTGGAGTTTACGGTGAGATGTTTACTCAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | ATCCTCAGAGAGATGGGCAATTGTGGTTTCCAGAAATaGCACTTCCTGTGGACCCTCAGTGCACTATGGTTG | + |
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Preference number: 3 (lower is better) Translates to: ILREMGNCGFQK*HFLWTLSALWL Trigger: CAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | ATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTaGACCCTCAGTGCACTATGGTTGAGTAAACATCTC | + |
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Preference number: 3 (lower is better) Translates to: MGNCGFQKWHFL*TLSALWLSKHL Trigger: GAGATGTTTACTCAACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CAA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTTGCAACAGGCAAGCTTaGGTTCAAATTTCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: QLWFPEMALPVDPQCTMVCNRQA*VQISCP Trigger: AGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCA...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CAA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTGAATTTTCTACCACATaGCAACAGGCAAGCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: QLWFPEMALPVDPQCTMVEFSTT*QQASFG Trigger: ACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATTC...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | ACATACACACTCAAAGATACCTACACTAAGACTGCATaGAAAATGCAAGAAGCCTGTGCTCCTTCACCGGAT | + |
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Preference number: 3 (lower is better) Translates to: TYTLKDTYTKTA*KMQEACAPSPD Trigger: ATCCGGTGAAGGAGCACAGGCTTCTTGCATTTTCCATGCAGTCTTAGTGTAGGTATCTTTGAGTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CAA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCTTTTCTTCATGCAAGTaGGTCCCTGGCTATATGTCT | + |
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Preference number: 3 (lower is better) Translates to: ASSLSLLRNTLKPFSLNAFSSCK*VPGYMS Trigger: AGACATATAGCCAGGGACCAACTTGCATGAAGAAAA...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR-3UTR CAA 90 bp | AATCTGACTGAATCACAAACCATTGGGTGGATGTTTAACAGGCATACACTATGCTTGAGGAAGAGTTTCTaGTGGTTCAGGGTGCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: NLTESQTIGWMFNRHTLCLRKSF*WFRVLL Trigger: CAAGAGCACCCTGAACCACAAGAAACTCTTCCTCAA...GCATAGTGTATGCCTGTTAAACATCCACCCAATGGTTTGTGATTCAGTCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CCA 72 bp | GTACTTCAGAGTTCTAATAGTGTTCTAGCTCTCATGTaGAGTTCTTTTTCACGACCCAAACCCACCCACAAA | + |
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Preference number: 3 (lower is better) Translates to: VLQSSNSVLALM*SSFSRPKPTHK Trigger: TTTGTGGGTGGGTTTGGGTCGTGAAAAAGAACTCCACATGAGAGCTAGAACACTATTAGAACTCTGAAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | CAGTCCAGTGCAAAAACCTTCTCATCTAATGACTACTaGACATCTTTCAAGGCTCCTACCTTCTCATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: QSSAKTFSSNDY*TSFKAPTFSLS Trigger: ACTCAATGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGAGAAGGTTTTTGCACTGGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTTTTGTGCTTTTGAACTaGTCCACTCTGCTGCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSFVLLN*STLLLN Trigger: ATTAAGCAGCAGAGTGGACAAGTTCAAAAGCACAAA...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR GCA 72 bp | TTTCTGCTTTTTCTCTCTAAGGCTCAATTATACCCATaGACCTACCACACTGGGTTCAGTCACTATATGTCT | + |
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Preference number: 3 (lower is better) Translates to: FLLFLSKAQLYP*TYHTGFSHYMS Trigger: AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTTAGAGAGAAAAAGCAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR TCA 72 bp | ATGCCATCATGTCTTGGAAGACCTTTATTATTTCGGTaGACATTTATCACTCCAACAAGAGACAGTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: MPSCLGRPLLFR*TFITPTRDSPV Trigger: CACTGGACTGTCTCTTGTTGGAGTGATAAATGTTCACCGAAATAATAAAGGTCTTCCAAGACATGATGGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR CCA 72 bp | GAAATTTTCAATCTGACTGAATCACAAACCATTGGGTaGATGTTTAACAGGCATACACTATGCGCCTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: EIFNLTESQTIG*MFNRHTLCASD Trigger: ATCAGAGGCGCATAGTGTATGCCTGTTAAACATCCACCCAATGGTTTGTGATTCAGTCAGATTGAAAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR TCA 72 bp | ACTACTGGACATCTTTCAAGGCTCCTACCTTCTCATTaGGTGCATAGCCTCTCTGATATAGTGATTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: TTGHLSRLLPSH*VHSLSDIVILF Trigger: AAATAAAATCACTATATCAGAGAGGCTATGCACTCAATGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGACACAAAGGAAGATTTaGAGTGCAGAATCTCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLTQRKI*SAESQL Trigger: TAGCTGAGATTCTGCACTCAAAATCTTCCTTTGTGT...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| 3UTR CCA 72 bp | ATCACTTGGGTCCAAGAGTTAAATGCCATCATGTCTTaGAAGACCTTTATTATTTCGGTGAACATTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: ITWVQELNAIMS*KTFIISVNIYH Trigger: GTGATAAATGTTCACCGAAATAATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAAGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| 3UTR GCA 72 bp | TACATGCTGGACAGTAGAGATATAGGAGAAGTTACATaGTTACGTCTTCTCATTATGATATTCCATAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: YMLDSRDIGEVT*LRLLIMIFHKA Trigger: AGCTTTATGGAATATCATAATGAGAAGACGTAAGCATGTAACTTCTCCTATATCTCTACTGTCCAGCATGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CCA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTGGCTGGAGCGGCGCTTaGAGGCCGACACCCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: QLWFPEMALPVDPQCTMVGWSGA*RPTPGR Trigger: GCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCC...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCATGGTCTCCGCCTCACTaGCCTCTTGCGGCCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SERWAIVVSRNGTSCGPSWSPPH*PLAAAA Trigger: TGCAGCGGCCGCAAGAGGCCAGTGAGGCGGAGACCA...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR GCA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCGGGAGCGCCCGTCTTTaGTGGGGCTGGAGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ASSLSLLRNTLKPFSLNAGSARL*WGWSGA Trigger: AGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCC...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR GCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAAACACCCCGAGGACGTaGCTCTCACACAGGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SERWAIVVSRNGTSCGPSNTPRT*LSHRER Trigger: GCGCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGTT...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CCA 90 bp | CTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTAACAGGCTGGAGCGGCGCTTaGAGGCCGACACCCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LNYTHAPTTLGSVTICLTGWSGA*RPTPGR Trigger: GCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCC...TGTTAGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SERWAIVVSRNGTSCGPSRSALC*TPRGRA Trigger: GGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCT...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CCA 90 bp | GCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAACGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ASEFPKSPQEYIKTLFTERLCWG*SGAWRP Trigger: CGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACG...TTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTTTTTCTCTCTAAGGCTCAATTATACCCATGCACCTACCACACTGGGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLLFLSKAQLYPCTYHTGSARLC*GWSGAW Trigger: CCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCT...CCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTTAGAGAGAAAAAGCAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS-3UTR GCA 90 bp | AATCTGACTGAATCACAAACCATTGGGTGGATGTTTAACAGGCATACACTATGCGGGAGCGCCCGTCTTTaGTGGGGCTGGAGCGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLTESQTIGWMFNRHTLCGSARL*WGWSGA Trigger: AGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCC...GCATAGTGTATGCCTGTTAAACATCCACCCAATGGTTTGTGATTCAGTCAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR GCA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCGCCTCACTGGCCTCTTaGGGCCGCTGCAGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSLLRNTLKPFSLNAASLAS*GRCRSA Trigger: TGCGCTTCTGCAGCGGCCGCAAGAGGCCAGTGAGGC...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCACACCCGGTCGCTGTTaGACTCCCTCGCCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSLLRNTLKPFSLNATPGRC*TPSPAA Trigger: AGCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGT...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTTTTTCTCTCTAAGGCTCAATTATACCCATGCACCTACCACACTGGGACACCCGGTCGCTGTTaGACTCCCTCGCCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLSKAQLYPCTYHTGTPGRC*TPSPAA Trigger: AGCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGT...CCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTTAGAGAGAAAAAGCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCACAATCCCTTTCAGCTaGGGTTCTGGTCTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPDASEFPKSPQEYIKTTIPFS*GSGLRL Trigger: GAGGCGGAGACCAGAACCCCAGCTGAAAGGGATTGT...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | GCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASEFPKSPQEYIKTLFTELDSLA*RFCRIK Trigger: CTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAA...TTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | ATGTTTAACAGGCATACACTATGCGCCTCTGATTCTCTTCTTTCTCTTTTGAGGGCCTCACTGGCCTCTTaGGGCCGCTGCAGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MFNRHTLCASDSLLSLLRASLAS*GRCRSA Trigger: TGCGCTTCTGCAGCGGCCGCAAGAGGCCAGTGAGGC...CCTCAAAAGAGAAAGAAGAGAATCAGAGGCGCATAGTGTATGCCTGTTAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLSARLC*GWSGAW Trigger: CCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCT...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCTGCCTCCATTCATGGTaGGTGTTCCCGAACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPDASEFPKSPQEYIKTCLHSW*VFPNFS Trigger: GGAAAAGTTCGGGAACACCCACCATGAATGGAGGCA...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | AATCTGACTGAATCACAAACCATTGGGTGGATGTTTAACAGGCATACACTATGCAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLTESQTIGWMFNRHTLCRSALC*TPRGRA Trigger: GGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCT...GCATAGTGTATGCCTGTTAAACATCCACCCAATGGTTTGTGATTCAGTCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCACTTGATTCACGACTTTaGCTCCATTCATGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SERWAIVVSRNGTSCGPSLDSRL*LHSWWV Trigger: CACCCACCATGAATGGAGGCAAAGTCGTGAATCAAG...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTACATTATATATGGTGTGATTTGTCATGGCTATATTGGTCTCCGCCTCACTaGCCTCTTGCGGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVHYIWCDLSWLYWSPPH*PLAAAA Trigger: TGCAGCGGCCGCAAGAGGCCAGTGAGGCGGAGACCA...ATATAGCCATGACAAATCACACCATATATAATGTACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTTTTTCTCTCTAAGGCTCAATTATACCCATGCACCTACCACACTGGGACAATCCCTTTCAGCTaGGGTTCTGGTCTCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLFLSKAQLYPCTYHTGTIPFS*GSGLRL Trigger: GAGGCGGAGACCAGAACCCCAGCTGAAAGGGATTGT...CCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTTAGAGAGAAAAAGCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCCTTGGTCCCATCAATaGTACCATCTGGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPDASEFPKSPQEYIKTPWSHQ*YHLDAS Trigger: AGATGCATCCAGATGGTACCATTGATGGGACCAAGG...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | TTGGGTCCAAGAGTTAAATGCCATCATGTCTTGGAAGACCTTTATTATTTCGGTTTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPRVKCHHVLEDLYYFGLDSLA*RFCRIK Trigger: CTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAA...ACCGAAATAATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCGGATGCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCAATGAGATGAGGGCTTaGTTTTCTTCACTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPDASEFPKSPQEYIKTNEMRA*FSSLCS Trigger: GGAACAGAGTGAAGAAAACCAAGCCCTCATCTCATT...GGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGCATCCGGTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTTTCCTTGAGCGTCCTTaGTTTTCTCCAATTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLWFPEMALPVDPQCTMVFLERP*FSPISC Trigger: ACACGAAATTGGAGAAAAGCAAGGACGCTCAAGGAA...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTCCTTGGTCCCATCAATaGTACCATCTGGATGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSPWSHQ*YHLDAS Trigger: AGATGCATCCAGATGGTACCATTGATGGGACCAAGG...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCCTTTGCCTCCATTCATaGTGGGTGTTCCCGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSLLRNTLKPFSLNALCLHS*WVFPNF Trigger: AAAGTTCGGGAACACCCACCATGAATGGAGGCAAAG...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAACTGGCGATACAGGGTTaGGGAATAGATCACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASEFPKSPQEYIKTLFTELAIQG*GIDHIV Trigger: TACTATGTGATCTATTCCTCAACCCTGTATCGCCAG...TTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCTGCAGGAAATATCCCTaGTGGCTGAATAACCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSLSLLRNTLKPFSLNACRKYP*WLNNLV Trigger: GACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCA...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTTGCAGGAAATATCCCTaGTGGCTGAATAACCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSCRKYP*WLNNLV Trigger: GACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCA...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACACGGCCTGATTCCTGCTaGCGATACAGGGTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFLPHCNRQALVQISCPTRPDSC*RYRVEE Trigger: TTCCTCAACCCTGTATCGCCAGCAGGAATCAGGCCG...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | CTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTAACAAATATCCCTGCTGGCTaGATAACCTTGTCACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNYTHAPTTLGSVTICLTNIPAG*ITLSQS Trigger: GGATTGTGACAAGGTTATTCAGCCAGCAGGGATATT...TGTTAGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAAAAACCTTCTCATCTAATGACTACTGGACATCTTTCAAGGCTCCTACCTATGGTACCATCTGGATaGATCTGCAGGAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VQKPSHLMTTGHLSRLLPMVPSG*ICRKYP Trigger: GGGATATTTCCTGCAGATGCATCCAGATGGTACCAT...AGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGAGAAGGTTTTTGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| 3UTR CAA 72 bp | CTTTTGAGGAAGAGTTTCTTGTGGTTCAGGGTGCTCTaGAATTCAGCCAAAATCAACATTCAACTCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLRKSFLWFRVL*NSAKINIQLLT Trigger: GGTCAGGAGTTGAATGTTGATTTTGGCTGAATTCAAGAGCACCCTGAACCACAAGAAACTCTTCCTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGTCCCGAACTTTTCCTTaGGCGTCCTTGCTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLSRTFP*ASLLFS Trigger: GGAGAAAAGCAAGGACGCTCAAGGAAAAGTTCGGGA...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | TTGGGTCCAAGAGTTAAATGCCATCATGTCTTGGAAGACCTTTATTATTTCGGTCGCTGTTTTCGTCCTTaGTCCCATCAATGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPRVKCHHVLEDLYYFGRCFRP*SHQWYH Trigger: ATGGTACCATTGATGGGACCAAGGACGAAAACAGCG...ACCGAAATAATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| 3UTR CAA 72 bp | TTTCACGACCCAAACCCACCCACAAAACCCTGTCTATaGAAACCAAAGCTGTTAATTCCACATCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHDPNPPTKPCL*KPKLLIPHLFS Trigger: AGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGTGGGTGGGTTTGGGTCGTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | AAAACCTTCTCATCTAATGACTACTGGACATCTTTCAAGGCTCCTACCTTCTCAAGGAAATATCCCTGCTaGCTGAATAACCTTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTFSSNDYWTSFKAPTFSRKYPC*LNNLVT Trigger: TGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCT...TGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGAGAAGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGCGCTGTTTTCGTCCTTaGTCCCATCAATGGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLRCFRP*SHQWYH Trigger: ATGGTACCATTGATGGGACCAAGGACGAAAACAGCG...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACAAATATCCCTGCTGGCTaGATAACCTTGTCACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NFLPHCNRQALVQISCPTNIPAG*ITLSQS Trigger: GGATTGTGACAAGGTTATTCAGCCAGCAGGGATATT...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACACTACAGGAATTAGATTaGAGAGGGTGTAGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFLPHCNRQALVQISCPTLQELD*RGCSRC Trigger: ACAGCGACTACACCCTCTTCAATCTAATTCCTGTAG...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR GCA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACAATGGTACCATCTGGATaGATCTGCAGGAAATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFLPHCNRQALVQISCPTMVPSG*ICRKYP Trigger: GGGATATTTCCTGCAGATGCATCCAGATGGTACCAT...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| 3UTR CAA 72 bp | ACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTaGTCCTACACAAAGGAAGATTTTGAGTGCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: TTLQQASFGSNF*SYTKEDFECRI Trigger: GATTCTGCACTCAAAATCTTCCTTTGTGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CCA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACAAGGAAATATCCCTGCTaGCTGAATAACCTTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: NFLPHCNRQALVQISCPTRKYPC*LNNLVT Trigger: TGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCT...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGTTTGACCTTCTTTATTaGGTCCTAGAAACCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLFDLLY*VLETMH Trigger: GTGCATGGTTTCTAGGACTCAATAAAGAAGGTCAAA...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGTTCCCCTTCATGATTTaGCCTTCTTTATTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLFPFMI*PSLLSP Trigger: AGGACTCAATAAAGAAGGTCAAATCATGAAGGGGAA...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| 3UTR CAA 72 bp | CATGTGAATTTTCTACCACATTGCAACAGGCAAGCTTaGGTTCAAATTTCTTGTCCTACACAAAGGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: HVNFLPHCNRQA*VQISCPTQRKI Trigger: AATCTTCCTTTGTGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATTCACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| 3UTR CAA 72 bp | TATCACTTGGGTCCAAGAGTTAAATGCCATCATGTCTaGGAAGACCTTTATTATTTCGGTGAACATTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: YHLGPRVKCHHV*EDLYYFGEHLS Trigger: TGATAAATGTTCACCGAAATAATAAAGGTCTTCCAAGACATGATGGCATTTAACTCTTGGACCCAAGTGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
||
| CDS CCA 90 bp | TCTCACACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTTaGAGGCCGACACCCGGTCGCTGTTGGACTCCCTCGCCTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTGSARLCWGWSGA*RPTPGRCWTPSPAA Trigger: AGCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
||
| CDS CCA 90 bp | CGAGGACGTGCCTCTCACACAGGGAGCGCCCGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCGACACCCGGTCGCTGTTGGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGRASHTGSARLCWG*SGAWRPTPGRCWTP Trigger: GGGAGTCCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
||
| CDS CCA 90 bp | ACACCCCGAGGACGTGCCTCTCACACAGGGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGGAGGCCGACACCCGGTCGCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPRGRASHTGSARLC*GWSGAWRPTPGRCW Trigger: CCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
||
| CDS GCA 90 bp | TTGCGGCCGCTGCAGAAGCGCACTTTGCTGAACACCCCGAGGACGTaGCTCTCACACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPLQKRTLLNTPRT*LSHRERPSLLGLER Trigger: CCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
||
| CDS-3UTR CAA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTAGGGAGCGCCCGTCTTaGCTGGGGCTGGAGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLWFPEMALPVDPQCTMVRERPS*LGLERR Trigger: GCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCT...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
||
| CDS-3UTR CAA 90 bp | AAGGCTCAATTATACCCATGCACCTACCACACTGGGTTCAGTCACTATATGTCTGGGCTGGAGCGGCGCTaGGAGGCCGACACCCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KAQLYPCTYHTGFSHYMSGLERR*EADTRS Trigger: CGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCC...AGACATATAGTGACTGAACCCAGTGTGGTAGGTGCATGGGTATAATTGAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS-3UTR CAA 90 bp | AAAACCTTCTCATCTAATGACTACTGGACATCTTTCAAGGCTCCTACCTTCTCAGACACCCGGTCGCTGTaGGACTCCCTCGCCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: KTFSSNDYWTSFKAPTFSDTRSL*DSLACR Trigger: GCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGTC...TGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGAGAAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS-3UTR CAA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACAGGGCTGGAGCGGCGCTaGGAGGCCGACACCCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: NFLPHCNRQALVQISCPTGLERR*EADTRS Trigger: CGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCC...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS TCA 90 bp | CAATGGTACCATCTGGATGCATCTGCAGGAAATATCCCTGCTGGCTaGATAACCTTGTCACAATCCCTTTCAGCTGGGGTTCGCTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QWYHLDASAGNIPAG*ITLSQSLSAGVRLG Trigger: GCCCAAGCGAACCCCAGCTGAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231399.2 |
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| CDS-3UTR CAA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGGACACCCGGTCGCTGTaGGACTCCCTCGCCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLDTRSL*DSLACR Trigger: GCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGTC...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS TCA 90 bp | CAATGGTACCATCTGGATGCATCTGCAGGAAATATCCCTGCTGGCTaGATAACCTTGTCACAATCCCTTTCAGCTGGGGTTCTGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QWYHLDASAGNIPAG*ITLSQSLSAGVLVS Trigger: GGAGACCAGAACCCCAGCTGAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTATTATTTCGGTGAACATTTATCACTCCAACAAGAGACAGTCCAGTGCCTGCAGAAGCGCACTTaGCTGAACACCCCGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: DLYYFGEHLSLQQETVQCLQKRT*LNTPRT Trigger: CGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAG...GCACTGGACTGTCTCTTGTTGGAGTGATAAATGTTCACCGAAATAATAAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS TCA 90 bp | CAATGGTACCATCTGGATGCATCTGCAGGAAATATCCCTGCTGGCTaGATAACCTTGTCACAATCCCTTTCAGCTGGGGTTCTTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QWYHLDASAGNIPAG*ITLSQSLSAGVLCS Trigger: AGAGCAAAGAACCCCAGCTGAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232352.2 |
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| CDS GCA 90 bp | CCTCCATTCATGGTGGGTGTTCCCGAACTTTTCCTTGAGCGTCCTTaGTTTTCTCCAATTTCGTGTAGTGATGGTTCTCTGTACATACAC | + |
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Preference number: 5 (lower is better) Translates to: PPFMVGVPELFLERP*FSPISCSDGSLYIH Trigger: GTGTATGTACAGAGAACCATCACTACACGAAATTGGAGAAAAGCAAGGACGCTCAAGGAAAAGTTCGGGAACACCCACCATGAATGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000232352.2 |
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| CDS-3UTR CAA 90 bp | AATTTTCTACCACATTGCAACAGGCAAGCTTTGGTTCAAATTTCTTGTCCTACACTGCAGAAGCGCACTTaGCTGAACACCCCGAGGACG | + |
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Preference number: 5 (lower is better) Translates to: NFLPHCNRQALVQISCPTLQKRT*LNTPRT Trigger: CGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAG...TGTAGGACAAGAAATTTGAACCAAAGCTTGCCTGTTGCAATGTGGTAGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CAA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCGCTGGCGATACAGGGTaGAGGAATAGATCACATAGT | + |
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Preference number: 5 (lower is better) Translates to: ASSLSLLRNTLKPFSLNAAGDTG*RNRSHS Trigger: ACTATGTGATCTATTCCTCAACCCTGTATCGCCAGC...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CAA 90 bp | CAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAGTGCACTATGGTTGTTCCCCTTCATGATTaGACCTTCTTTATTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: QLWFPEMALPVDPQCTMVVPLHD*TFFIES Trigger: GGACTCAATAAAGAAGGTCAAATCATGAAGGGGAAC...AACCATAGTGCACTGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CAA 90 bp | GCGAGTTCCCTAAGTCTCCTCAGGAATACATTAAAACCCTTTTCACTGAATGCCTTCCCGAACTTTTCCTaGAGCGTCCTTGCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ASSLSLLRNTLKPFSLNAFPNFS*SVLAFL Trigger: GAGAAAAGCAAGGACGCTCAAGGAAAAGTTCGGGAA...GGCATTCAGTGAAAAGGGTTTTAATGTATTCCTGAGGAGACTTAGGGAACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CAA 90 bp | AAAACCTTCTCATCTAATGACTACTGGACATCTTTCAAGGCTCCTACCTTCTCATCGCTGTTTTCGTCCTaGGTCCCATCAATGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: KTFSSNDYWTSFKAPTFSSLFSS*VPSMVP Trigger: TGGTACCATTGATGGGACCAAGGACGAAAACAGCGA...TGAGAAGGTAGGAGCCTTGAAAGATGTCCAGTAGTCATTAGATGAGAAGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGAGATGGGCAATTGTGGTTTCCAGAAATGGCACTTCCTGTGGACCCTCAACAGACTCCTTAAATTaGCATTCTGGGGTAAAAACA | + |
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Preference number: 5 (lower is better) Translates to: SERWAIVVSRNGTSCGPSTDSLN*HSGVKT Trigger: TGTTTTTACCCCAGAATGCAAATTTAAGGAGTCTGT...TGAGGGTCCACAGGAAGTGCCATTTCTGGAAACCACAATTGCCCATCTCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS-3UTR CAA 90 bp | ACAAAACCCTGTCTATTGAAACCAAAGCTGTTAATTCCACATCTTTTCTCTCTGTCGCTGTTTTCGTCCTaGGTCCCATCAATGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: TKPCLLKPKLLIPHLFSLSLFSS*VPSMVP Trigger: TGGTACCATTGATGGGACCAAGGACGAAAACAGCGA...CAGAGAGAAAAGATGTGGAATTAACAGCTTTGGTTTCAATAGACAGGGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100024.3 |
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| CDS CCA 72 bp | GGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTTaGAGGCCGACACCCGGTCGCTGTTGGACTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GSARLCWGWSGA*RPTPGRCWTPS Trigger: CGAGGGAGTCCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CAA 90 bp | CTCTCACACAGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTaGGAGGCCGACACCCGGTCGCTGTTGGACTCCCTCGCCTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LSHRERPSLLGLERR*EADTRSLLDSLACR Trigger: GCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS GCA 72 bp | CGAGGACGTGCCTCTCACACAGGGAGCGCCCGTCTTTaGTGGGGCTGGAGCGGCGCTTGGAGGCCGACACCC | + |
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Preference number: 6 (lower is better) Translates to: RGRASHTGSARL*WGWSGAWRPTP Trigger: GGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CCA 72 bp | GCCTCTCACACAGGGAGCGCCCGTCTTTGCTGGGGCTaGAGCGGCGCTTGGAGGCCGACACCCGGTCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASHTGSARLCWG*SGAWRPTPGRC Trigger: ACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CCA 72 bp | GGACGTGCCTCTCACACAGGGAGCGCCCGTCTTTGCTaGGGCTGGAGCGGCGCTTGGAGGCCGACACCCGGT | + |
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Preference number: 6 (lower is better) Translates to: GRASHTGSARLC*GWSGAWRPTPG Trigger: ACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CAA 72 bp | AGGGAGCGCCCGTCTTTGCTGGGGCTGGAGCGGCGCTaGGAGGCCGACACCCGGTCGCTGTTGGACTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RERPSLLGLERR*EADTRSLLDSL Trigger: GAGGGAGTCCAACAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CAA 90 bp | CTGAACACCCCGAGGACGTGCCTCTCACACAGGGAGCGCCCGTCTTaGCTGGGGCTGGAGCGGCGCTTGGAGGCCGACACCCGGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LNTPRTCLSHRERPS*LGLERRLEADTRSL Trigger: CAGCGACCGGGTGTCGGCCTCCAAGCGCCGCTCCAGCCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGTTCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS GCA 72 bp | GAGGCCGACACCCGGTCGCTGTTGGACTCCCTCGCCTaGCGCTTCTGCCGGATCAAGGAGCTGGCTATCGCC | + |
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Preference number: 6 (lower is better) Translates to: EADTRSLLDSLA*RFCRIKELAIA Trigger: GGCGATAGCCAGCTCCTTGATCCGGCAGAAGCGGCAGGCGAGGGAGTCCAACAGCGACCGGGTGTCGGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS TCA 72 bp | CTGGCCTCTTGCGGCCGCTGCAGAAGCGCACTTTGCTaGACACCCCGAGGACGTGCCTCTCACACAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LASCGRCRSALC*TPRGRASHTGS Trigger: GCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS GCA 72 bp | CTGCAGAAGCGCACTTTGCTGAACACCCCGAGGACGTaGCTCTCACACAGGGAGCGCCCGTCTTTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LQKRTLLNTPRT*LSHRERPSLLG Trigger: CCCCAGCAAAGACGGGCGCTCCCTGTGTGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CCA 72 bp | AATCCCTTTCAGCTGGGGTTCTGGTCTCCGCCTCACTaGCCTCTTGCGGCCGCTGCAGAAGCGCACTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: NPFQLGFWSPPH*PLAAAAEAHFA Trigger: AGCAAAGTGCGCTTCTGCAGCGGCCGCAAGAGGCCAGTGAGGCGGAGACCAGAACCCCAGCTGAAAGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000231717.2 |
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| CDS CCA 72 bp | GGGTGTAGTCGCTGTTTTCGTCCTTGGTCCCATCAATaGTACCATCTGGATGCATCTGCAGGAAATATCCCT | + |
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Preference number: 6 (lower is better) Translates to: GCSRCFRPWSHQ*YHLDASAGNIP Trigger: AGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTGATGGGACCAAGGACGAAAACAGCGACTACACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100024.3 ENSMUST00000231399.2 ENSMUST00000232352.2 |
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| CDS GCA 72 bp | TCCTTGGTCCCATCAATGGTACCATCTGGATGCATCTaGAGGAAATATCCCTGCTGGCTGAATAACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SLVPSMVPSGCI*RKYPCWLNNLV Trigger: GACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTGATGGGACCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100024.3 ENSMUST00000231399.2 ENSMUST00000231717.2 ENSMUST00000232352.2 |
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| CDS GCA 72 bp | ATGGTACCATCTGGATGCATCTGCAGGAAATATCCCTaGTGGCTGAATAACCTTGTCACAATCCCTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MVPSGCICRKYP*WLNNLVTIPFS Trigger: GCTGAAAGGGATTGTGACAAGGTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100024.3 ENSMUST00000231399.2 ENSMUST00000231717.2 ENSMUST00000232352.2 |
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| CDS GCA 72 bp | TTTTCGTCCTTGGTCCCATCAATGGTACCATCTGGATaGATCTGCAGGAAATATCCCTGCTGGCTGAATAAC | + |
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Preference number: 6 (lower is better) Translates to: FSSLVPSMVPSG*ICRKYPCWLNN Trigger: GTTATTCAGCCAGCAGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTGATGGGACCAAGGACGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100024.3 ENSMUST00000231399.2 ENSMUST00000231717.2 ENSMUST00000232352.2 |
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| CDS GCA 72 bp | ATGGTGGGTGTTCCCGAACTTTTCCTTGAGCGTCCTTaGTTTTCTCCAATTTCGTGTAGTGATGGTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: MVGVPELFLERP*FSPISCSDGSL Trigger: CAGAGAACCATCACTACACGAAATTGGAGAAAAGCAAGGACGCTCAAGGAAAAGTTCGGGAACACCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100024.3 ENSMUST00000232352.2 |
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| CDS CCA 72 bp | TACTGTAGTCGCTGTTTTCGTCCTTGGTCCCATCAATaGTACCATCTGGATGCATCTGCAGGAAATATCCCT | + |
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Preference number: 6 (lower is better) Translates to: YCSRCFRPWSHQ*YHLDASAGNIP Trigger: AGGGATATTTCCTGCAGATGCATCCAGATGGTACCATTGATGGGACCAAGGACGAAAACAGCGACTACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231717.2 |
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