Pregenerated sensors for FGD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022788Ensembl transcript IDs: ENSMUST00000069284.14, ENSMUST00000159542.8, ENSMUST00000161188.9, ENSMUST00000161861.8, ENSMUST00000162671.8
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACAAGCACAACCTAATAGACAGCCATAGTTCATCTGAGAGTCCATaGGATAAAAAGGGAGAATTCTGCAGTTTCTTTAGTGCTTCCCAT | + |
Preference number: 1 (lower is better) Translates to: HKHNLIDSHSSSESP*DKKGEFCSFFSASH Trigger: ATGGGAAGCACTAAAGAAACTGCAGAATTCTCCCTTTTTATCCCATGGACTCTCAGATGAACTATGGCTGTCTATTAGGTTGTGCTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 90 bp | ATGTATAGTTATTGTTTAATTTTATCAATAGGTACCCTTCACACCTaGTTTCTTTCCTCCCACTCAAACACAGCATCAATGCTGACAACT | + |
Preference number: 1 (lower is better) Translates to: MYSYCLILSIGTLHT*FLSSHSNTASMLTT Trigger: AGTTGTCAGCATTGATGCTGTGTTTGAGTGGGAGGAAAGAAACCAGGTGTGAAGGGTACCTATTGATAAAATTAAACAATAACTATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 90 bp | AAAATGAGACGTTTCTTGTGCAACATGAGGTGTATAAATGTATGGTaGTCTCAATTTCTGATAAATTGTACTCTACATCTCAAGTGTAGC | + |
Preference number: 1 (lower is better) Translates to: KMRRFLCNMRCINVW*SQFLINCTLHLKCS Trigger: GCTACACTTGAGATGTAGAGTACAATTTATCAGAAATTGAGACCACCATACATTTATACACCTCATGTTGCACAAGAAACGTCTCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 90 bp | CCTTCTACTCTTAAAACAACAGAGATAAATAAGACCTGTGCTTTCTaGGAATTGATTTACTCTTATTCATGCTCATTTGCCATGACAACA | + |
Preference number: 1 (lower is better) Translates to: PSTLKTTEINKTCAF*ELIYSYSCSFAMTT Trigger: TGTTGTCATGGCAAATGAGCATGAATAAGAGTAAATCAATTCCCAGAAAGCACAGGTCTTATTTATCTCTGTTGTTTTAAGAGTAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 90 bp | AGCACCTTCACCAAAACTTCCTGGCCCCACCTCTGTTGCCCTTGCTaGCCTGGCCTTTATGTGGTCTCCGGAGACCTGTCTGAACTGTTT | + |
Preference number: 2 (lower is better) Translates to: STFTKTSWPHLCCPC*PGLYVVSGDLSELF Trigger: AAACAGTTCAGACAGGTCTCCGGAGACCACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGGGGCCAGGAAGTTTTGGTGAAGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACTGCACTCGCTGCTCTaGCTTGCCTGGATAGAGCAC | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATLHSLL*LAWIEH Trigger: GTGCTCTATCCAGGCAAGTCAGAGCAGCGAGTGCAG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 90 bp | GAGCTCCGCTTTGTAGCTGACAGAAGGAAAGCTCACCCAGCCACCTaGTGTTTATTAGATGTTGTCCTCATTTACCCGTCCATAACAGTC | + |
Preference number: 2 (lower is better) Translates to: ELRFVADRRKAHPAT*CLLDVVLIYPSITV Trigger: GACTGTTATGGACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTCCTTCTGTCAGCTACAAAGCGGAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 90 bp | ACTGTGCAAATGTGGAGAGATCTGAGGCTATGTCAGGTGACTTCCTaGGTGCCTCTCTACCTCATCATTGAGGCAAGGTTACTTACTGTT | + |
Preference number: 2 (lower is better) Translates to: TVQMWRDLRLCQVTS*VPLYLIIEARLLTV Trigger: AACAGTAAGTAACCTTGCCTCAATGATGAGGTAGAGAGGCACCAAGGAAGTCACCTGACATAGCCTCAGATCTCTCCACATTTGCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGGTACCCTTCACACCTaGTTTCTTTCCTCCCACTCA | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATGTLHT*FLSSHS Trigger: TGAGTGGGAGGAAAGAAACCAGGTGTGAAGGGTACC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGAGCTGGGGATGTCTTaGGCTATGTGTATTACTGGA | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATELGMS*AMCITG Trigger: TCCAGTAATACACATAGCTCAAGACATCCCCAGCTC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGGCTCCGCTTTGTAGCTaGCAGAAGGAAAGCTCACCC | + |
Preference number: 2 (lower is better) Translates to: KHKFPLLITLFSQISWHTAPLCS*QKESSP Trigger: GGGTGAGCTTTCCTTCTGTCAGCTACAAAGCGGAGC...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGCAATTAAGAGGTCCTaGGTTCAATTCCCAGCAACC | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATAIKRS*VQFPAT Trigger: GGTTGCTGGGAATTGAACTCAGGACCTCTTAATTGC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAAGGGGAAAGTGGTTTGTaGTTGGCTCAGTGTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKGESGL*LAQCGE Trigger: CTCCCCACACTGAGCCAAGCACAAACCACTTTCCCC...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGAGAAGATCCTCTTCTaGCACTCACACTCCTTACTG | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATEKILF*HSHSLL Trigger: CAGTAAGGAGTGTGAGTGCCAGAAGAGGATCTTCTC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACACAACCATCTGCAATaGGATCTGATGCCTTCTTCG | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATHNHLQ*DLMPSS Trigger: CGAAGAAGGCATCAGATCCCATTGCAGATGGTTGTG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 90 bp | AAGCCATGGAACGATGCCTTCCTTCTTTCCCCTGTGCTCAGCAATTaGGACTATCATATCACTTCTCAGAAGTTGATTCTCTATATGCTG | + |
Preference number: 2 (lower is better) Translates to: KPWNDAFLLSPVLSN*DYHITSQKLILYML Trigger: CAGCATATAGAGAATCAACTTCTGAGAAGTGATATGATAGTCCAAATTGCTGAGCACAGGGGAAAGAAGGAAGGCATCGTTCCATGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACATGCTCATTTGCCATaGCAACACACTGACAGATAT | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATHAHLP*QHTDRY Trigger: ATATCTGTCAGTGTGTTGTCATGGCAAATGAGCATG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAAGAAGCCATGGAACGATaGCTTCCTTCTTTCCCCTGT | + |
Preference number: 2 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKEAMER*LPSFPC Trigger: ACAGGGGAAAGAAGGAAGGCATCGTTCCATGGCTTC...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAAGCTATGTGTATTACTaGAAACTCCACACTAGCAGC | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATSYVYY*KLHTSS Trigger: GCTGCTAGTGTGGAGTTTCCAGTAATACACATAGCT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATCACTTCTCAGAAGTTaGTTCTCTATATGCTGTAGC | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATSLLRS*FSICCS Trigger: GCTACAGCATATAGAGAATCAACTTCTGAGAAGTGA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACCTAATTGGTTCCCTTaGTCCTTTGGAGTAGAAAAA | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATPNWFP*SFGVEK Trigger: TTTTTCTACTCCAAAGGAGCAAGGGAACCAATTAGG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAACTGTTTCTCATCCTTaGATAGAATTCTCCTTAGCC | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATTVSHP*IEFSLA Trigger: GGCTAAGGAGAATTCTATGCAAGGATGAGAAACAGT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGACAAGGAAGGAGAGCTaGGGATGTCTTGAGCTATGT | + |
Preference number: 2 (lower is better) Translates to: KHKFPLLITLFSQISWHTTRKES*GCLELC Trigger: ACATAGCTCAAGACATCCCCAGCTCTCCTTCCTTGT...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACATGTGCTTATCATGTaGTGTAGGAAAGCTAAGTTA | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATHVLIM*CRKAKL Trigger: TAACTTAGCTTTCCTACATCACATGATAAGCACATG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGCAGAGCAAACAAACTaGTTCATTATACATAGCCTT | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATAEQTN*FIIHSL Trigger: AAGGCTATGTATAATGAAGCAGTTTGTTTGCTCTGC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAAACCATATTTCTCAATaGAAAGTGCTAAGAGACAAG | + |
Preference number: 2 (lower is better) Translates to: LHSFLSCAKVGALSIPATNHISQ*KVLRDK Trigger: CTTGTCTCTTAGCACTTTGCATTGAGAAATATGGTT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTaGACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTTGCAT | + |
Preference number: 2 (lower is better) Translates to: FLLHNVISMKLGAIL*TIFFLFMGQHNTLH Trigger: ATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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3UTR CAA 90 bp | TATTTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTaGTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTTG | + |
Preference number: 2 (lower is better) Translates to: YFLLHNVISMKLGAI*LTIFFLFMGQHNTL Trigger: CAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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3UTR-3UTR GCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAAATGAGACGTTTCTTGTaGAACATGAGGTGTATAAAT | + |
Preference number: 2 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKMRRFL*NMRCIN Trigger: ATTTATACACCTCATGTTGCACAAGAAACGTCTCAT...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAAACTTCAACAGAAGAATaGCTCTGCATACTGATTTTA | + |
Preference number: 2 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKTSTEE*LCILIL Trigger: TAAAATCAGTATGCAGAGCCATTCTTCTGTTGAAGT...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR GCA 72 bp | TTCACCAAAACTTCCTGGCCCCACCTCTGTTGCCCTTaGTTGCCTGGCCTTTATGTGGTCTCCGGAGACCTG | + |
Preference number: 3 (lower is better) Translates to: FTKTSWPHLCCP*LPGLYVVSGDL Trigger: CAGGTCTCCGGAGACCACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGGGGCCAGGAAGTTTTGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 72 bp | CCCAGCAACCGCATGGTGGTTCACAACCATCTGCAATaGGATCTGATGCCTTCTTCGGGTGTGTCTAAAGAT | + |
Preference number: 3 (lower is better) Translates to: PSNRMVVHNHLQ*DLMPSSGVSKD Trigger: ATCTTTAGACACACCCGAAGAAGGCATCAGATCCCATTGCAGATGGTTGTGAACCACCATGCGGTTGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR TCA 72 bp | AGGCAAGGTTACTTACTGTTCCTGCACTCGCTGCTCTaGCTTGCCTGGATAGAGCACCTTCACCAAAACTTC | + |
Preference number: 3 (lower is better) Translates to: RQGYLLFLHSLL*LAWIEHLHQNF Trigger: GAAGTTTTGGTGAAGGTGCTCTATCCAGGCAAGTCAGAGCAGCGAGTGCAGGAACAGTAAGTAACCTTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 72 bp | GAGAGATGGGGAAAGTGGTTTGTGCTTGGCTCAGTGTaGGGAGAAGTAAAGGTGAGAACCAGAGAAGATCCT | + |
Preference number: 3 (lower is better) Translates to: ERWGKWFVLGSV*GEVKVRTREDP Trigger: AGGATCTTCTCTGGTTCTCACCTTTACTTCTCCCCACACTGAGCCAAGCACAAACCACTTTCCCCATCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCAGAGCTGGGGATGTCTaGAGCTATGTGTATTACTGG | + |
Preference number: 3 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVRAGDV*SYVYYW Trigger: CCAGTAATACACATAGCTCAAGACATCCCCAGCTCT...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR TCA 72 bp | GTGCTAAGAGACAAGGAAGGAGAGCTGGGGATGTCTTaGGCTATGTGTATTACTGGAAACTCCACACTAGCA | + |
Preference number: 3 (lower is better) Translates to: VLRDKEGELGMS*AMCITGNSTLA Trigger: TGCTAGTGTGGAGTTTCCAGTAATACACATAGCTCAAGACATCCCCAGCTCTCCTTCCTTGTCTCTTAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR TCA 72 bp | CTTGCCTGGCCTTTATGTGGTCTCCGGAGACCTGTCTaGACTGTTTCTCATCCTTGCATAGAATTCTCCTTA | + |
Preference number: 3 (lower is better) Translates to: LAWPLCGLRRPV*TVSHPCIEFSL Trigger: TAAGGAGAATTCTATGCAAGGATGAGAAACAGTTCAGACAGGTCTCCGGAGACCACATAAAGGCCAGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAACCACCTCTGTTGCCCTaGCTTGCCTGGCCTTTATGT | + |
Preference number: 3 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKPPLLP*LAWPLC Trigger: ACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGG...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGGCTCACCCAGCCACCTaGTGTTTATTAGATGTTGTC | + |
Preference number: 3 (lower is better) Translates to: KHKFPLLITLFSQISWHTAHPAT*CLLDVV Trigger: GACAACATCTAATAAACACAAGGTGGCTGGGTGAGC...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGTATTTGTGGTTATTTaGAGAGAGATGGGGAAAGTG | + |
Preference number: 3 (lower is better) Translates to: LHSFLSCAKVGALSIPATVFVVI*REMGKV Trigger: CACTTTCCCCATCTCTCTCAAAATAACCACAAATAC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACTTCTATTCAAGAATTaGCTGGTAGGCAAACATGTA | + |
Preference number: 3 (lower is better) Translates to: LHSFLSCAKVGALSIPATLLFKN*LVGKHV Trigger: TACATGTTTGCCTACCAGCAAATTCTTGAATAGAAG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 72 bp | AACCTAATAGACAGCCATAGTTCATCTGAGAGTCCATaGGATAAAAAGGGAGAATTCTGCAGTTTCTTTAGT | + |
Preference number: 3 (lower is better) Translates to: NLIDSHSSSESP*DKKGEFCSFFS Trigger: ACTAAAGAAACTGCAGAATTCTCCCTTTTTATCCCATGGACTCTCAGATGAACTATGGCTGTCTATTAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR-3UTR CAA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATAGGGCAGCACAATACTTaGCATATGGTAAGCTCTAAA | + |
Preference number: 3 (lower is better) Translates to: FLLHNVISMKLGAILLTIGQHNT*HMVSSK Trigger: TTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCC...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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3UTR TCA 72 bp | GGTAATCCAGTGAAGACAGTATGGCAACCTTTATGTTaGATTCAATTCACAGAAATGTACAACACAGCTGAT | + |
Preference number: 3 (lower is better) Translates to: GNPVKTVWQPLC*IQFTEMYNTAD Trigger: ATCAGCTGTGTTGTACATTTCTGTGAATTGAATTCAACATAAAGGTTGCCATACTGTCTTCACTGGATTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 72 bp | TATTGTTTAATTTTATCAATAGGTACCCTTCACACCTaGTTTCTTTCCTCCCACTCAAACACAGCATCAATG | + |
Preference number: 3 (lower is better) Translates to: YCLILSIGTLHT*FLSSHSNTASM Trigger: CATTGATGCTGTGTTTGAGTGGGAGGAAAGAAACCAGGTGTGAAGGGTACCTATTGATAAAATTAAACAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR GCA 72 bp | TTTCTGGGAATTGATTTACTCTTATTCATGCTCATTTaGCATGACAACACACTGACAGATATGAGGATTAAG | + |
Preference number: 3 (lower is better) Translates to: FLGIDLLLFMLI*HDNTLTDMRIK Trigger: CTTAATCCTCATATCTGTCAGTGTGTTGTCATGGCAAATGAGCATGAATAAGAGTAAATCAATTCCCAGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CCA 72 bp | AGACGTTTCTTGTGCAACATGAGGTGTATAAATGTATaGTGGTCTCAATTTCTGATAAATTGTACTCTACAT | + |
Preference number: 3 (lower is better) Translates to: RRFLCNMRCINV*WSQFLINCTLH Trigger: ATGTAGAGTACAATTTATCAGAAATTGAGACCACCATACATTTATACACCTCATGTTGCACAAGAAACGTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | GAGCACCTTCACCAAAACTTCCTGGCCCCACCTCTGTaGCCCTTGCTTGCCTGGCCTTTATGTGGTCTCCGG | + |
Preference number: 4 (lower is better) Translates to: EHLHQNFLAPPL*PLLAWPLCGLR Trigger: CCGGAGACCACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGGGGCCAGGAAGTTTTGGTGAAGGTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | ACCAAAACTTCCTGGCCCCACCTCTGTTGCCCTTGCTaGCCTGGCCTTTATGTGGTCTCCGGAGACCTGTCT | + |
Preference number: 4 (lower is better) Translates to: TKTSWPHLCCPC*PGLYVVSGDLS Trigger: AGACAGGTCTCCGGAGACCACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGGGGCCAGGAAGTTTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | CTTCACCAAAACTTCCTGGCCCCACCTCTGTTGCCCTaGCTTGCCTGGCCTTTATGTGGTCTCCGGAGACCT | + |
Preference number: 4 (lower is better) Translates to: LHQNFLAPPLLP*LAWPLCGLRRP Trigger: AGGTCTCCGGAGACCACATAAAGGCCAGGCAAGCAAGGGCAACAGAGGTGGGGCCAGGAAGTTTTGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | ATGTGGAGAGATCTGAGGCTATGTCAGGTGACTTCCTaGGTGCCTCTCTACCTCATCATTGAGGCAAGGTTA | + |
Preference number: 4 (lower is better) Translates to: MWRDLRLCQVTS*VPLYLIIEARL Trigger: TAACCTTGCCTCAATGATGAGGTAGAGAGGCACCAAGGAAGTCACCTGACATAGCCTCAGATCTCTCCACAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCTGGACTGGGTCAGCTTaGAACTATGTGGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVWTGSA*NYVADL Trigger: CAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCA...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCTGTTCAGAACTGGCCTaGAGCTCCAGGGTTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVCSELA*SSRVLS Trigger: AGAAAGAACCCTGGAGCTGCAGGCCAGTTCTGAACA...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCCCGCCTTCTGGTCAGTaGATTGAAGGACTCTTTGCA | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVPPSGQ*IEGLFA Trigger: TGCAAAGAGTCCTTCAATGCACTGACCAGAAGGCGG...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCCAGCCACTACACCATTaGCCAAACAACCATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVQPLHH*PNNHVA Trigger: GGCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTG...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCCTCTGGTTCGAACTGTaGATTTTGAGCCAACCAAGC | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVLWFEL*ILSQPS Trigger: GCTTGGTTGGCTCAAAATTCACAGTTCGAACCAGAG...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | TTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACACCGTCCCTGGAGTCCTaGAGCTGCTGTCAGAAGCAT | + |
Preference number: 4 (lower is better) Translates to: FFLFMGQHNTLHMVSSKTPSLES*SCCQKH Trigger: ATGCTTCTGACAGCAGCTGCAGGACTCCAGGGACGG...TGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGCCGTCCCTGGAGTCCTaGAGCTGCTGTCAGAAGCAT | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTPSLES*SCCQKH Trigger: ATGCTTCTGACAGCAGCTGCAGGACTCCAGGGACGG...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAACTATGCTTCCCTTTTaGGGTACAAGAAGTAGGGGC | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATTMLPF*GTRSRG Trigger: GCCCCTACTTCTTGTACCTCAAAAGGGAAGCATAGT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACTGGAGTCCTGCAGCTaGTGTCAGAAGCATTTTCAT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATLESCS*CQKHFH Trigger: ATGAAAATGCTTCTGACAGCAGCTGCAGGACTCCAG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATTCTGTGGAGAGTGCTaGGGCAGAAATTTTCGTGGA | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATFCGEC*GRNFRG Trigger: TCCACGAAAATTTCTGCCCCAGCACTCTCCACAGAA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | ATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGGCAGCACCAGCCACTACACCATTaGCCAAACAACCATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: MKLGAILLTIFFLFMGQHQPLHH*PNNHVA Trigger: GGCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTG...GTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | GCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATACCTCTGGTTCGAACTGTaGATTTTGAGCCAACCAAGC | + |
Preference number: 4 (lower is better) Translates to: ARSYFVDHILSLHGAAQYLWFEL*ILSQPS Trigger: GCTTGGTTGGCTCAAAATTCACAGTTCGAACCAGAG...GTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATCCTTCACTTCATGGTaGTGGTCCAACGTATCCAAT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATSFTSW*WSNVSN Trigger: ATTGGATACGTTGGACCAGCACCATGAAGTGAAGGA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATGTCTTGTTCAGAACTaGCCTGCAGCTCCAGGGTTC | + |
Preference number: 4 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKCLVQN*PAAPGF Trigger: GAACCCTGGAGCTGCAGGCCAGTTCTGAACAAGACA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACATAGGCTCCAGCATGTaGTGCTGCAGCGTTAAGCTT | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYIGSSM*CCSVKL Trigger: AAGCTTAACGCTGCAGCATCACATGCTGGAGCCTAT...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGCATCAATACTTTCTTaGAGGGCCTTGATCCATTCT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATASILS*RALIHS Trigger: AGAATGGATCAAGGCCCTTCAAGAAAGTATTGATGC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCTCCGATACCTTACTATaGTTCCCTTTTGAGGTACAA | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVSDTLL*FPFEVQ Trigger: TTGTACCTCAAAAGGGAAGCATAGTAAGGTATCGGA...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATVVSHS*IRFSSS Trigger: TGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTATGTTCAGAACTGGCCTaGAGCTCCAGGGTTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLCSELA*SSRVLS Trigger: AGAAAGAACCCTGGAGCTGCAGGCCAGTTCTGAACA...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCAAGCACAAGGGGGTCTTaGTTGGGGATCACACACCAG | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSASTRGS*LGITHQ Trigger: CTGGTGTGTGATCCCCAAGCAAGACCCCCTTGTGCT...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGTCTGCAGCAAAGCTATaGACAGACTTGGACTGGGTC | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTSAAKL*TDLDWV Trigger: GACCCAGTCCAAGTCTGTGCATAGCTTTGCTGCAGA...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCATTCTGACTTTTTCTTaGGTCCAGGGAGATTGTTCA | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVILTFS*VQGDCS Trigger: TGAACAATCTCCCTGGACCCAAGAAAAAGTCAGAAT...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | AATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGACTATGCTTCCCTTTTaGGGTACAAGAAGTAGGGGC | + |
Preference number: 4 (lower is better) Translates to: NLHEARSYFVDHILSLHGTMLPF*GTRSRG Trigger: GCCCCTACTTCTTGTACCTCAAAAGGGAAGCATAGT...CCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCGAAGCATTTTCATCATaGCTATTGGCTATGGATGAT | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVEAFSS*LLAMDD Trigger: ATCATCCATAGCCAATAGTCATGATGAAAATGCTTC...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACAGATCTTCTGTTTCTaGATCTCTTCAGTCACTGAT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATQIFCF*ISSVTD Trigger: ATCAGTGACTGAAGAGATTCAGAAACAGAAGATCTG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGTGCTTCTGTGGAGAGTaGTGGGGCAGAAATTTTCGT | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTCFCGE*WGRNFR Trigger: ACGAAAATTTCTGCCCCAGCACTCTCCACAGAAGCA...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCATCTGGTTTTGTaGAGCCACTACACCATTGGC | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYFHLVL*SHYTIG Trigger: GCCAATGGTGTAGTGGCTGCACAAAACCAGATGGAA...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | AATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGCTGGAGTCCTGCAGCTaGTGTCAGAAGCATTTTCAT | + |
Preference number: 4 (lower is better) Translates to: NLHEARSYFVDHILSLHGLESCS*CQKHFH Trigger: ATGAAAATGCTTCTGACAGCAGCTGCAGGACTCCAG...CCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | CACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCCTGCCTCCTTCAAAGTaGCTGATGAGATCCGATACC | + |
Preference number: 4 (lower is better) Translates to: HNVISMKLGAILLTIFFLLPPSK*LMRSDT Trigger: GGTATCGGATCTCATCAGCCACTTTGAAGGAGGCAG...GAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTATTCTGTGGAGAGTGCTaGGGCAGAAATTTTCGTGGA | + |
Preference number: 4 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLFCGEC*GRNFRG Trigger: TCCACGAAAATTTCTGCCCCAGCACTCTCCACAGAA...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | CAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCCCCTGAGTCTGATCTaGGTCGTTTTCCTGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: QCNLHEARSYFVDHILSLPLSLI*VVFLLL Trigger: CAGAAGCAGGAAAACGACCCAGATCAGACTCAGGGG...AAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATGCATCATTCCAGTCTaGGGAGTCAGGAGACAACTT | + |
Preference number: 4 (lower is better) Translates to: FFLFMGQHNTLHMVSSKTCIIPV*GVRRQL Trigger: AAGTTGTCTCCTGACTCCCCAGACTGGAATGATGCA...TGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | CAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTTGTCTTGTTCAGAACTaGCCTGCAGCTCCAGGGTTC | + |
Preference number: 4 (lower is better) Translates to: QCNLHEARSYFVDHILSLCLVQN*PAAPGF Trigger: GAACCCTGGAGCTGCAGGCCAGTTCTGAACAAGACA...AAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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3UTR CAA 72 bp | CTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTaGTTGACCATATTCTTTCTCTTCATGGGGCAGCAC | + |
Preference number: 4 (lower is better) Translates to: LHNVISMKLGAI*LTIFFLFMGQH Trigger: GTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCAATAGGCTCCAGCATGTaGTGCTGCAGCGTTAAGCTT | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSAIGSSM*CCSVKL Trigger: AAGCTTAACGCTGCAGCATCACATGCTGGAGCCTAT...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | AAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATTCCGAGCTGCTAGTTTaGGGATTTGTCCTTCTTTTA | + |
Preference number: 4 (lower is better) Translates to: KLGAILLTIFFLFMGQHNSELLV*GFVLLL Trigger: TAAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGA...ATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATTGCGATTGCATTTCTaGAAGTTTCATGCCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATLRLHF*KFHAFD Trigger: ATCAAAGGCATGAAACTTTCAGAAATGCAATCGCAA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATTCTGGTCAGTGCATTaGAGGACTCTTTGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKFWSVH*RTLCTS Trigger: TGAAGTGCAAAGAGTCCTTCAATGCACTGACCAGAA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTCCTTCACTTCATGGTaGTGGTCCAACGTATCCAAT | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYSFTSW*WSNVSN Trigger: ATTGGATACGTTGGACCAGCACCATGAAGTGAAGGA...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATACCGCCTTCTGGTCAGTaGATTGAAGGACTCTTTGCA | + |
Preference number: 4 (lower is better) Translates to: FLLHNVISMKLGAILLTIPPSGQ*IEGLFA Trigger: TGCAAAGAGTCCTTCAATGCACTGACCAGAAGGCGG...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCACTGCCTCCTTCAAAGTaGCTGATGAGATCCGATACC | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSALPPSK*LMRSDT Trigger: GGTATCGGATCTCATCAGCCACTTTGAAGGAGGCAG...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCTATCTGGAAAGTGTGTaGATATTCTTCATTGTGAGT | + |
Preference number: 4 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVYLESV*IFFIVS Trigger: ACTCACAATGAAGAATATCCACACACTTTCCAGATA...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATCTTTCCCAGATATCTaGAAAGTGTGTGGATATTCT | + |
Preference number: 4 (lower is better) Translates to: LHSFLSCAKVGALSIPATSFPDI*KVCGYS Trigger: AGAATATCCACACACTTTCCAGATATCTGGGAAAGA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACAATCTCTTCAGTCACTaGTTTAAACTGGGGAACACG | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYNLFSH*FKLGNT Trigger: CGTGTTCCCCAGTTTAAATCAGTGACTGAAGAGATT...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGAATCTCTTCAGTCACTaGTTTAAACTGGGGAACACG | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTNLFSH*FKLGNT Trigger: CGTGTTCCCCAGTTTAAATCAGTGACTGAAGAGATT...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | TTGTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTATCGAACTGTGAATTTTaGGCCAACCAAGCTGAATCT | + |
Preference number: 4 (lower is better) Translates to: LLTIFFLFMGQHNTLHMVSNCEF*ANQAES Trigger: AGATTCAGCTTGGTTGGCTCAAAATTCACAGTTCGA...TACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATGCTTCTGTGGAGAGTaGTGGGGCAGAAATTTTCGT | + |
Preference number: 4 (lower is better) Translates to: FLLHNVISMKLGAILLTICFCGE*WGRNFR Trigger: ACGAAAATTTCTGCCCCAGCACTCTCCACAGAAGCA...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | ATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTGTAGTTTCCCATTCTTaGATTCGTTTCTCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: MGQHNTLHMVSSKTYFLTVVSHS*IRFSSS Trigger: TGAGCTGGAGAAACGAATGCAAGAATGGGAAACTAC...AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACAATGGCGCCAACTTTTaGAGGATATCTCCAATTCTG | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYNGANF*RISPIL Trigger: CAGAATTGGAGATATCCTGCAAAAGTTGGCGCCATT...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTCTTCACATTCCATCTaGTTTTGTGCAGCCACTACA | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYSSHSI*FCAATT Trigger: TGTAGTGGCTGCACAAAACCAGATGGAATGTGAAGA...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATCTTCACATTCCATCTaGTTTTGTGCAGCCACTACA | + |
Preference number: 4 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKSSHSI*FCAATT Trigger: TGTAGTGGCTGCACAAAACCAGATGGAATGTGAAGA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCATGCATCATTCCAGTCTaGGGAGTCAGGAGACAACTT | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSACIIPV*GVRRQL Trigger: AAGTTGTCTCCTGACTCCCCAGACTGGAATGATGCA...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
||
3UTR CAA 72 bp | CACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTaGACCATATTCTTTCTCTTCATGGGGCAGCACAAT | + |
Preference number: 4 (lower is better) Translates to: HNVISMKLGAIL*TIFFLFMGQHN Trigger: ATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGCAAATCAATGTAACTTaGCAAAACACTGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTQINVT*QNTASF Trigger: GAAGGAGGCAGTGTTTTGTCAAGTTACATTGATTTG...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | GTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGGAAGCATTTTCATCATaGCTATTGGCTATGGATGAT | + |
Preference number: 4 (lower is better) Translates to: VDHILSLHGAAQYFAYGKEAFSS*LLAMDD Trigger: ATCATCCATAGCCAATAGTCATGATGAAAATGCTTC...CTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
||
CDS-3UTR TCA 90 bp | AATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGCAGATCTTCTGTTTCTaGATCTCTTCAGTCACTGAT | + |
Preference number: 4 (lower is better) Translates to: NLHEARSYFVDHILSLHGQIFCF*ISSVTD Trigger: ATCAGTGACTGAAGAGATTCAGAAACAGAAGATCTG...CCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | CAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTTTCTGGTCAGTGCATTaGAGGACTCTTTGCACTTCA | + |
Preference number: 4 (lower is better) Translates to: QCNLHEARSYFVDHILSLFWSVH*RTLCTS Trigger: TGAAGTGCAAAGAGTCCTTCAATGCACTGACCAGAA...AAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACATACATCTTAAGGAATaGCGCCAACTTTTGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYIHLKE*RQLLQD Trigger: ATCCTGCAAAAGTTGGCGCCATTCCTTAAGATGTAT...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGATACATCTTAAGGAATaGCGCCAACTTTTGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTIHLKE*RQLLQD Trigger: ATCCTGCAAAAGTTGGCGCCATTCCTTAAGATGTAT...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCATCCGAGCTGCTAGTTTaGGGATTTGTCCTTCTTTTA | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSASELLV*GFVLLL Trigger: TAAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGA...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCATCGAACTGTGAATTTTaGGCCAACCAAGCTGAATCT | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSASNCEF*ANQAES Trigger: AGATTCAGCTTGGTTGGCTCAAAATTCACAGTTCGA...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR TCA 90 bp | CTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTGCATCAATACTTTCTTaGAGGGCCTTGATCCATTCT | + |
Preference number: 4 (lower is better) Translates to: LHNVISMKLGAILLTIFFASILS*RALIHS Trigger: AGAATGGATCAAGGCCCTTCAAGAAAGTATTGATGC...AAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | ATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTTTGCGATTGCATTTCTaGAAGTTTCATGCCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: MGQHNTLHMVSSKTYFLTLRLHF*KFHAFD Trigger: ATCAAAGGCATGAAACTTTCAGAAATGCAATCGCAA...AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATTTCTTCACTGTCTGTaGATCCACTTATTATCTGGT | + |
Preference number: 4 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKFLHCL*IHLLSG Trigger: ACCAGATAATAAGTGGATTCACAGACAGTGAAGAAA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCAAATGGCGCCAACTTTTaGAGGATATCTCCAATTCTG | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSANGANF*RISPIL Trigger: CAGAATTGGAGATATCCTGCAAAAGTTGGCGCCATT...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | GGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTAAGTTTAACCAGTTCCACTaGATTATCAAATCCCTTCAC | + |
Preference number: 4 (lower is better) Translates to: GQHNTLHMVSSKTYFLTKFNQFH*IIKSLH Trigger: GTGAAGGGATTTGATAATGCAGTGGAACTGGTTAAA...CTTAGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTCTTTCCCAGATATCTaGAAAGTGTGTGGATATTCT | + |
Preference number: 4 (lower is better) Translates to: FLFMGQHNTLHMVSSKTYSFPDI*KVCGYS Trigger: AGAATATCCACACACTTTCCAGATATCTGGGAAAGA...GTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | GGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTAAGTGCACTTCATACACATaGTCACTTCATTATCACGTA | + |
Preference number: 4 (lower is better) Translates to: GQHNTLHMVSSKTYFLTKCTSYT*SLHYHV Trigger: TACGTGATAATGAAGTGACCATGTGTATGAAGTGCA...CTTAGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGTGCACTTCATACACATaGTCACTTCATTATCACGTA | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTCTSYT*SLHYHV Trigger: TACGTGATAATGAAGTGACCATGTGTATGAAGTGCA...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | ACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTaGCATATGGTAAGCTCTAAAACATACTTCCTAACT | + |
Preference number: 4 (lower is better) Translates to: TIFFLFMGQHNT*HMVSSKTYFLT Trigger: AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATACAAATCAATGTAACTTaGCAAAACACTGCCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: FLLHNVISMKLGAILLTIQINVT*QNTASF Trigger: GAAGGAGGCAGTGTTTTGTCAAGTTACATTGATTTG...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATAATAGCAACATGTTGTTaGATAAGAAGAGGTAGCGCT | + |
Preference number: 4 (lower is better) Translates to: FLLHNVISMKLGAILLTIIATCC*IRRGSA Trigger: AGCGCTACCTCTTCTTATTCAACAACATGTTGCTAT...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCAATAGCAACATGTTGTTaGATAAGAAGAGGTAGCGCT | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSAIATCC*IRRGSA Trigger: AGCGCTACCTCTTCTTATTCAACAACATGTTGCTAT...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | CTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTTCCGATACCTTACTATaGTTCCCTTTTGAGGTACAA | + |
Preference number: 4 (lower is better) Translates to: LHNVISMKLGAILLTIFFSDTLL*FPFEVQ Trigger: TTGTACCTCAAAAGGGAAGCATAGTAAGGTATCGGA...AAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTATTTCATCATGACTATTaGCTATGGATGATGCAGAAT | + |
Preference number: 4 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLFHHDY*LWMMQN Trigger: ATTCTGCATCATCCATAGCCAATAGTCATGATGAAA...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGTTTCATCATGACTATTaGCTATGGATGATGCAGAAT | + |
Preference number: 4 (lower is better) Translates to: KHKFPLLITLFSQISWHTFHHDY*LWMMQN Trigger: ATTCTGCATCATCCATAGCCAATAGTCATGATGAAA...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA | + |
Preference number: 4 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLIALLE*LAAVDI Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CCA 90 bp | ATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTTATCTGGAAAGTGTGTaGATATTCTTCATTGTGAGT | + |
Preference number: 4 (lower is better) Translates to: MGQHNTLHMVSSKTYFLTYLESV*IFFIVS Trigger: ACTCACAATGAAGAATATCCACACACTTTCCAGATA...AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR TCA 90 bp | TTTCTTCTTCACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATAATGATGCAGAATCTGTaGTGGTTTCATTTCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: FLLHNVISMKLGAILLTIMMQNL*WFHFFL Trigger: GAGAAAGAAATGAAACCATCACAGATTCTGCATCAT...TATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTGAAGAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCATTTAACCAGTTCCACTaGATTATCAAATCCCTTCAC | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSAFNQFH*IIKSLH Trigger: GTGAAGGGATTTGATAATGCAGTGGAACTGGTTAAA...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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3UTR CAA 72 bp | ACTGAATATCTAATCATATTCCTTCTATTCAAGAATTaGCTGGTAGGCAAACATGTACTCTTCTTGCTGATC | + |
Preference number: 4 (lower is better) Translates to: TEYLIIFLLFKN*LVGKHVLFLLI Trigger: GATCAGCAAGAAGAGTACATGTTTGCCTACCAGCAAATTCTTGAATAGAAGGAATATGATTAGATATTCAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR GCA 90 bp | CAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCTCCATTTTTCTTATTaGACTATTAGAATGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: QCNLHEARSYFVDHILSLLHFSY*TIRMAC Trigger: GCAAGCCATTCTAATAGTGCAATAAGAAAAATGGAG...AAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR GCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCACTCCATTTTTCTTATTaGACTATTAGAATGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSALHFSY*TIRMAC Trigger: GCAAGCCATTCTAATAGTGCAATAAGAAAAATGGAG...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CCA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCAATTGCACTATTAGAATaGCTTGCTGCTGTAGATATA | + |
Preference number: 4 (lower is better) Translates to: KGSIFHIILELQQKNGSAIALLE*LAAVDI Trigger: TATATCTACAGCAGCAAGCCATTCTAATAGTGCAAT...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS TCA 90 bp | TATCATCCACAACGTAGCCCAGGAGGGGTATGGTCGCTTGGGCTCTaGCATCCTGAGGAGCGCCATACATGTACAGCACAAGGGGGTCTT | + |
Preference number: 5 (lower is better) Translates to: YHPQRSPGGVWSLGL*HPEERHTCTAQGGL Trigger: AAGACCCCCTTGTGCTGTACATGTATGGCGCTCCTCAGGATGTCAGAGCCCAAGCGACCATACCCCTCCTGGGCTACGTTGTGGATGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 90 bp | TGTGATAATGAGGATGCCTCACTTACATGTCCACATGCCCGGCAGTaGTGCCGCCTTCTGGTCAGTGCATTGAAGGACTCTTTGCACTTC | + |
Preference number: 5 (lower is better) Translates to: CDNEDASLTCPHARQ*CRLLVSALKDSLHF Trigger: GAAGTGCAAAGAGTCCTTCAATGCACTGACCAGAAGGCGGCATCACTGCCGGGCATGTGGACATGTAAGTGAGGCATCCTCATTATCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS GCA 90 bp | TCTGACTTTTTCTTGGGTCCAGGGAGATTGTTCAAGGTGGCTAGATaGTCACTTGGGCCATCTGGTGTCTCACCTGTGACAGCTAGAAGG | + |
Preference number: 5 (lower is better) Translates to: SDFFLGPGRLFKVAR*SLGPSGVSPVTARR Trigger: CCTTCTAGCTGTCACAGGTGAGACACCAGATGGCCCAAGTGAGCATCTAGCCACCTTGAACAATCTCCCTGGACCCAAGAAAAAGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 90 bp | ATGCACAGACTTGGACTGGGTCAGCTTGAAACTATGTGGCAGATCTaGACTCTTAGGCATATCATCCACAACGTAGCCCAGGAGGGGTAT | + |
Preference number: 5 (lower is better) Translates to: MHRLGLGQLETMWQI*TLRHIIHNVAQEGY Trigger: ATACCCCTCCTGGGCTACGTTGTGGATGATATGCCTAAGAGTGCAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAGTCTGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACACAGCACAAGGGGGTCTaGCTTGGGGATCACACACCA | + |
Preference number: 5 (lower is better) Translates to: LHSFLSCAKVGALSIPATQHKGV*LGDHTP Trigger: TGGTGTGTGATCCCCAAGCAAGACCCCCTTGTGCTG...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS GCA 90 bp | ACACTGCCTCCTTCAAAGTGGCTGATGAGATCCGATACCTTACTATaGTTCCCTTTTGAGGTACAAGAAGTAGGGGCCGGATTAGACTCC | + |
Preference number: 5 (lower is better) Translates to: TLPPSKWLMRSDTLL*FPFEVQEVGAGLDS Trigger: GGAGTCTAATCCGGCCCCTACTTCTTGTACCTCAAAAGGGAAGCATAGTAAGGTATCGGATCTCATCAGCCACTTTGAAGGAGGCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 90 bp | CTTCTTTTGAGGGAAGCCCTAAGTCCGTCCCTGGAGTCCTGCAGCTaGTGTCAGAAGCATTTTCATCATGACTATTGGCTATGGATGATG | + |
Preference number: 5 (lower is better) Translates to: LLLREALSPSLESCS*CQKHFHHDYWLWMM Trigger: CATCATCCATAGCCAATAGTCATGATGAAAATGCTTCTGACAGCAGCTGCAGGACTCCAGGGACGGACTTAGGGCTTCCCTCAAAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 90 bp | CACATGTGTATCAGGAGAGGCGGCAGCAGTCTGAATAGCCATCTCTaGGCTAAGAGTAGTCTCCTTCTCATCTTCACATTCCATCTGGTT | + |
Preference number: 5 (lower is better) Translates to: HMCIRRGGSSLNSHL*AKSSLLLIFTFHLV Trigger: AACCAGATGGAATGTGAAGATGAGAAGGAGACTACTCTTAGCCCAGAGATGGCTATTCAGACTGCTGCCGCCTCTCCTGATACACATGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 90 bp | AGCAAAGCTATGCACAGACTTGGACTGGGTCAGCTTGAAACTATGTaGCAGATCTGCACTCTTAGGCATATCATCCACAACGTAGCCCAG | + |
Preference number: 5 (lower is better) Translates to: SKAMHRLGLGQLETM*QICTLRHIIHNVAQ Trigger: CTGGGCTACGTTGTGGATGATATGCCTAAGAGTGCAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAGTCTGTGCATAGCTTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCACAAGGGGGTCTTGCTaGGGGATCACACACCAGATT | + |
Preference number: 5 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVTRGSC*GITHQI Trigger: AATCTGGTGTGTGATCCCCAAGCAAGACCCCCTTGT...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS CCA 90 bp | TCTCATCTTCACATTCCATCTGGTTTTGTGCAGCCACTACACCATTaGCCAAACAACCATGTTGCCCCTGAGTCTGATCTGGGTCGTTTT | + |
Preference number: 5 (lower is better) Translates to: SHLHIPSGFVQPLHH*PNNHVAPESDLGRF Trigger: AAAACGACCCAGATCAGACTCAGGGGCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTGCACAAAACCAGATGGAATGTGAAGATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 90 bp | ATCTCTGGGCTAAGAGTAGTCTCCTTCTCATCTTCACATTCCATCTaGTTTTGTGCAGCCACTACACCATTGGCCAAACAACCATGTTGC | + |
Preference number: 5 (lower is better) Translates to: ISGLRVVSFSSSHSI*FCAATTPLAKQPCC Trigger: GCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTGCACAAAACCAGATGGAATGTGAAGATGAGAAGGAGACTACTCTTAGCCCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | ATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTCTGGCTCCCCTTCTTTaGAGGGAAGCCCTAAGTCCG | + |
Preference number: 5 (lower is better) Translates to: MGQHNTLHMVSSKTYFLTLAPLL*REALSP Trigger: CGGACTTAGGGCTTCCCTCAAAAGAAGGGGAGCCAG...AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTACCCATTTTCCCTCTCTaGGAGCTCAGCGTCCATCCC | + |
Preference number: 5 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLPIFPL*ELSVHP Trigger: GGGATGGACGCTGAGCTCCAAGAGAGGGAAAATGGG...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGCCCATTTTCCCTCTCTaGGAGCTCAGCGTCCATCCC | + |
Preference number: 5 (lower is better) Translates to: KHKFPLLITLFSQISWHTPIFPL*ELSVHP Trigger: GGGATGGACGCTGAGCTCCAAGAGAGGGAAAATGGG...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS TCA 90 bp | TCCGTCCCTGGAGTCCTGCAGCTGCTGTCAGAAGCATTTTCATCATaGCTATTGGCTATGGATGATGCAGAATCTGTGATGGTTTCATTT | + |
Preference number: 5 (lower is better) Translates to: SVPGVLQLLSEAFSS*LLAMDDAESVMVSF Trigger: AAATGAAACCATCACAGATTCTGCATCATCCATAGCCAATAGTCATGATGAAAATGCTTCTGACAGCAGCTGCAGGACTCCAGGGACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATTGGACTGGGTCAGCTaGAAACTATGTGGCAGATCT | + |
Preference number: 5 (lower is better) Translates to: LHSFLSCAKVGALSIPATLDWVS*KLCGRS Trigger: AGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAAAGCTATGCACAGACTaGGACTGGGTCAGCTTGAAA | + |
Preference number: 5 (lower is better) Translates to: LHSFLSCAKVGALSIPATKLCTD*DWVSLK Trigger: TTTCAAGCTGACCCAGTCCAAGTCTGTGCATAGCTT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATGGCTAGATGCTCACTaGGGCCATCTGGTGTCTCAC | + |
Preference number: 5 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKWLDAH*GHLVSH Trigger: GTGAGACACCAGATGGCCCAAGTGAGCATCTAGCCA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACAACATTCCATCTGGTTTaGTGCAGCCACTACACCATT | + |
Preference number: 5 (lower is better) Translates to: LHSFLSCAKVGALSIPATTFHLV*CSHYTI Trigger: AATGGTGTAGTGGCTGCACAAAACCAGATGGAATGT...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | GAAAGCTCACCCAGCCACCTTGTGTTTATTAGATGTTGTCCTCATTTACCCGTCTTCCGAGCTGCTAGTTaGAGGATTTGTCCTTCTTTT | + |
Preference number: 5 (lower is better) Translates to: ESSPSHLVFIRCCPHLPVFRAAS*RICPSF Trigger: AAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGAA...GACGGGTAAATGAGGACAACATCTAATAAACACAAGGTGGCTGGGTGAGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | CTCCATTCATTCCTTTCATGTGCTAAGGTAGGTGCTCTCTCTATACCTGCAACATGTTTCAGTTCCTCATaGTCTGCAGCAAAGCTATGC | + |
Preference number: 5 (lower is better) Translates to: LHSFLSCAKVGALSIPATCFSSS*SAAKLC Trigger: GCATAGCTTTGCTGCAGACAATGAGGAACTGAAACA...TGTTGCAGGTATAGAGAGAGCACCTACCTTAGCACATGAAAGGAATGAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | ATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTTCATGGGGCAGCACACATTCCATCTGGTTTaGTGCAGCCACTACACCATT | + |
Preference number: 5 (lower is better) Translates to: MKLGAILLTIFFLFMGQHTFHLV*CSHYTI Trigger: AATGGTGTAGTGGCTGCACAAAACCAGATGGAATGT...GTGCTGCCCCATGAAGAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | TTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACACCATTCTTCCTTGTCTaGTTCAGAACTGGCCTGCAG | + |
Preference number: 5 (lower is better) Translates to: FFLFMGQHNTLHMVSSKTPFFLV*FRTGLQ Trigger: CTGCAGGCCAGTTCTGAACAAGACAAGGAAGAATGG...TGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAACCATTCTTCCTTGTCTaGTTCAGAACTGGCCTGCAG | + |
Preference number: 5 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKPFFLV*FRTGLQ Trigger: CTGCAGGCCAGTTCTGAACAAGACAAGGAAGAATGG...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS TCA 90 bp | AGAAGAGGTAGCGCTCTTGTGCTGATGTGTTCCGAGCTGCTAGTTTaGGGATTTGTCCTTCTTTTATTAGTTCATTTGAGGGATTTACAA | + |
Preference number: 5 (lower is better) Translates to: RRGSALVLMCSELLV*GFVLLLLVHLRDLQ Trigger: TTGTAAATCCCTCAAATGAACTAATAAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGAACACATCAGCACAAGAGCGCTACCTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 90 bp | CTGCAGCTCCAGGGTTCTTTCTTTCCCAGATATCTGGAAAGTGTGTaGATATTCTTCATTGTGAGTCTCCACAATTTTCATTCCATCAAT | + |
Preference number: 5 (lower is better) Translates to: LQLQGSFFPRYLESV*IFFIVSLHNFHSIN Trigger: ATTGATGGAATGAAAATTGTGGAGACTCACAATGAAGAATATCCACACACTTTCCAGATATCTGGGAAAGAAAGAACCCTGGAGCTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAATGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC | + |
Preference number: 5 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKCSFPF*HSFLQL Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACA...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | GTTGACCATATTCTTTCTCTTCATGGGGCAGCACAATACTTTGCATATGGTAAGTTTCAAGTGACTTTTTaGCATCATTCCAGTCTGGGG | + |
Preference number: 5 (lower is better) Translates to: VDHILSLHGAAQYFAYGKFQVTF*HHSSLG Trigger: CCCCAGACTGGAATGATGCAAAAAAGTCACTTGAAA...CTTACCATATGCAAAGTATTGTGCTGCCCCATGAAGAGAAAGAATATGGTCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | GGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTAAGGCATTGAAGGACTCTTaGCACTTCATACACATGGTC | + |
Preference number: 5 (lower is better) Translates to: GQHNTLHMVSSKTYFLTKALKDS*HFIHMV Trigger: GACCATGTGTATGAAGTGCAAAGAGTCCTTCAATGC...CTTAGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | AAAGTGAGTTCCAGGACAGCTATACAGAGAAACCTTGTCTCGAAAAACCAAAAAGCATTGAAGGACTCTTaGCACTTCATACACATGGTC | + |
Preference number: 5 (lower is better) Translates to: KVSSRTAIQRNLVSKNQKALKDS*HFIHMV Trigger: GACCATGTGTATGAAGTGCAAAGAGTCCTTCAATGC...TTTTTGGTTTTTCGAGACAAGGTTTCTCTGTATAGCTGTCCTGGAACTCACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS TCA 90 bp | CTTTCTTTCCCAGATATCTGGAAAGTGTGTGGATATTCTTCATTGTaGGTCTCCACAATTTTCATTCCATCAATGCCAACTCTGGTTCGA | + |
Preference number: 5 (lower is better) Translates to: LSFPDIWKVCGYSSL*VSTIFIPSMPTLVR Trigger: TCGAACCAGAGTTGGCATTGATGGAATGAAAATTGTGGAGACTCACAATGAAGAATATCCACACACTTTCCAGATATCTGGGAAAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 90 bp | AGATTTTCTGCCAAGGCTTTGACTTTTCCATGTACTGAAGGAAACTaGACACCTCACTATTTCCTGATACTTCTGCTGATTCAATCTCTA | + |
Preference number: 5 (lower is better) Translates to: RFSAKALTFPCTEGN*TPHYFLILLLIQSL Trigger: TAGAGATTGAATCAGCAGAAGTATCAGGAAATAGTGAGGTGTGCAGTTTCCTTCAGTACATGGAAAAGTCAAAGCCTTGGCAGAAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | CACAATGTAATCTCCATGAAGCTAGGAGCTATTTTGTTGACCATATTCTTTCTCTGTAGTTTCCCATTCTaGCATTCGTTTCTCCAGCTC | + |
Preference number: 5 (lower is better) Translates to: HNVISMKLGAILLTIFFLCSFPF*HSFLQL Trigger: GAGCTGGAGAAACGAATGCAAGAATGGGAAACTACA...GAGAAAGAATATGGTCAACAAAATAGCTCCTAGCTTCATGGAGATTACATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGTTTCAAGTGACTTTTTaGCATCATTCCAGTCTGGGG | + |
Preference number: 5 (lower is better) Translates to: KHKFPLLITLFSQISWHTFQVTF*HHSSLG Trigger: CCCCAGACTGGAATGATGCAAAAAAGTCACTTGAAA...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | ATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAACTTTCCGAGCTGCTAGTTaGAGGATTTGTCCTTCTTTT | + |
Preference number: 5 (lower is better) Translates to: MGQHNTLHMVSSKTYFLTFRAAS*RICPSF Trigger: AAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGAA...AGTTAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS TCA 90 bp | AAGCATTTTCATCATGACTATTGGCTATGGATGATGCAGAATCTGTaGTGGTTTCATTTCTTTCTCCATTCAGCACATGTGTATCAGGAG | + |
Preference number: 5 (lower is better) Translates to: KHFHHDYWLWMMQNL*WFHFFLHSAHVYQE Trigger: CTCCTGATACACATGTGCTGAATGGAGAAAGAAATGAAACCATCACAGATTCTGCATCATCCATAGCCAATAGTCATGATGAAAATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS-3UTR CAA 90 bp | TTCATGGGGCAGCACAATACTTTGCATATGGTAAGCTCTAAAACATACTTCCTAGCAAATCAATGTAACTaGACAAAACACTGCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: FMGQHNTLHMVSSKTYFLANQCN*TKHCLL Trigger: AAGGAGGCAGTGTTTTGTCAAGTTACATTGATTTGC...TAGGAAGTATGTTTTAGAGCTTACCATATGCAAAGTATTGTGCTGCCCCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS-3UTR CAA 90 bp | AAGCATAAATTTCCTTTACTAATAACTCTCTTCTCCCAGATAAGCTGGCACACGGCAAATCAATGTAACTaGACAAAACACTGCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: KHKFPLLITLFSQISWHTANQCN*TKHCLL Trigger: AAGGAGGCAGTGTTTTGTCAAGTTACATTGATTTGC...CGTGTGCCAGCTTATCTGGGAGAAGAGAGTTATTAGTAAAGGAAATTTATGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCACATTCTGACTTTTTCTaGGGTCCAGGGAGATTGTTC | + |
Preference number: 5 (lower is better) Translates to: KGSIFHIILELQQKNGSAHSDFF*GPGRLF Trigger: GAACAATCTCCCTGGACCCAAGAAAAAGTCAGAATG...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCACAGTCTTTACAAACCTaGTTCAATCTTCCACCATCA | + |
Preference number: 5 (lower is better) Translates to: KGSIFHIILELQQKNGSAQSLQT*FNLPPS Trigger: TGATGGTGGAAGATTGAACAAGGTTTGTAAAGACTG...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS-3UTR CAA 90 bp | AAAGGTTCCATTTTCCACATTATTTTAGAACTTCAACAGAAGAATGGCTCTGCATTTTCTGCCAAGGCTTaGACTTTTCCATGTACTGAA | + |
Preference number: 5 (lower is better) Translates to: KGSIFHIILELQQKNGSAFSAKA*TFPCTE Trigger: TTCAGTACATGGAAAAGTCAAAGCCTTGGCAGAAAA...TGCAGAGCCATTCTTCTGTTGAAGTTCTAAAATAATGTGGAAAATGGAACCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000161861.8 |
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CDS TCA 72 bp | CAACGTAGCCCAGGAGGGGTATGGTCGCTTGGGCTCTaGCATCCTGAGGAGCGCCATACATGTACAGCACAA | + |
Preference number: 6 (lower is better) Translates to: QRSPGGVWSLGL*HPEERHTCTAQ Trigger: TTGTGCTGTACATGTATGGCGCTCCTCAGGATGTCAGAGCCCAAGCGACCATACCCCTCCTGGGCTACGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | GAGGATGCCTCACTTACATGTCCACATGCCCGGCAGTaGTGCCGCCTTCTGGTCAGTGCATTGAAGGACTCT | + |
Preference number: 6 (lower is better) Translates to: EDASLTCPHARQ*CRLLVSALKDS Trigger: AGAGTCCTTCAATGCACTGACCAGAAGGCGGCATCACTGCCGGGCATGTGGACATGTAAGTGAGGCATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161188.9 |
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CDS CAA 72 bp | ATCATCCACAACGTAGCCCAGGAGGGGTATGGTCGCTaGGGCTCTGACATCCTGAGGAGCGCCATACATGTA | + |
Preference number: 6 (lower is better) Translates to: IIHNVAQEGYGR*GSDILRSAIHV Trigger: TACATGTATGGCGCTCCTCAGGATGTCAGAGCCCAAGCGACCATACCCCTCCTGGGCTACGTTGTGGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 90 bp | CTTAGGCATATCATCCACAACGTAGCCCAGGAGGGGTATGGTCGCTaGGGCTCTGACATCCTGAGGAGCGCCATACATGTACAGCACAAG | + |
Preference number: 6 (lower is better) Translates to: LRHIIHNVAQEGYGR*GSDILRSAIHVQHK Trigger: CTTGTGCTGTACATGTATGGCGCTCCTCAGGATGTCAGAGCCCAAGCGACCATACCCCTCCTGGGCTACGTTGTGGATGATATGCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | ATTGGCCAAACAACCATGTTGCCCCTGAGTCTGATCTaGGTCGTTTTCCTGCTTCTGTGGAGAGTGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: IGQTTMLPLSLI*VVFLLLWRVLG Trigger: CCCCAGCACTCTCCACAGAAGCAGGAAAACGACCCAGATCAGACTCAGGGGCAACATGGTTGTTTGGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | CATTTCCAACAAACCACATGTCCACATGCCCGGCAGTaGTGCCGCCTTCTGGTCAGTGCATTGAAGGACTCT | + |
Preference number: 6 (lower is better) Translates to: HFQQTTCPHARQ*CRLLVSALKDS Trigger: AGAGTCCTTCAATGCACTGACCAGAAGGCGGCATCACTGCCGGGCATGTGGACATGTGGTTTGTTGGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 72 bp | TTCTTGGGTCCAGGGAGATTGTTCAAGGTGGCTAGATaGTCACTTGGGCCATCTGGTGTCTCACCTGTGACA | + |
Preference number: 6 (lower is better) Translates to: FLGPGRLFKVAR*SLGPSGVSPVT Trigger: TGTCACAGGTGAGACACCAGATGGCCCAAGTGAGCATCTAGCCACCTTGAACAATCTCCCTGGACCCAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | TTCAGCACATGTGTATCAGGAGAGGCGGCAGCAGTCTaGATAGCCATCTCTGGGCTAAGAGTAGTCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: FSTCVSGEAAAV*IAISGLRVVSF Trigger: GAAGGAGACTACTCTTAGCCCAGAGATGGCTATTCAGACTGCTGCCGCCTCTCCTGATACACATGTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | TCACTTCATGGTGCTGGTCCAACGTATCCAATCCCATaGTGTTCACCCCATTTTCCCTCTCTTGGAGCTCAG | + |
Preference number: 6 (lower is better) Translates to: SLHGAGPTYPIP*CSPHFPSLGAQ Trigger: CTGAGCTCCAAGAGAGGGAAAATGGGGTGAACACCATGGGATTGGATACGTTGGACCAGCACCATGAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 72 bp | CTTGGACTGGGTCAGCTTGAAACTATGTGGCAGATCTaGACTCTTAGGCATATCATCCACAACGTAGCCCAG | + |
Preference number: 6 (lower is better) Translates to: LGLGQLETMWQI*TLRHIIHNVAQ Trigger: CTGGGCTACGTTGTGGATGATATGCCTAAGAGTGCAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | CACATTCCATCTGGTTTTGTGCAGCCACTACACCATTaGCCAAACAACCATGTTGCCCCTGAGTCTGATCTG | + |
Preference number: 6 (lower is better) Translates to: HIPSGFVQPLHH*PNNHVAPESDL Trigger: CAGATCAGACTCAGGGGCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTGCACAAAACCAGATGGAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | ATCAGGAGAGGCGGCAGCAGTCTGAATAGCCATCTCTaGGCTAAGAGTAGTCTCCTTCTCATCTTCACATTC | + |
Preference number: 6 (lower is better) Translates to: IRRGGSSLNSHL*AKSSLLLIFTF Trigger: GAATGTGAAGATGAGAAGGAGACTACTCTTAGCCCAGAGATGGCTATTCAGACTGCTGCCGCCTCTCCTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 90 bp | TGGGCTAAGAGTAGTCTCCTTCTCATCTTCACATTCCATCTGGTTTaGTGCAGCCACTACACCATTGGCCAAACAACCATGTTGCCCCTG | + |
Preference number: 6 (lower is better) Translates to: WAKSSLLLIFTFHLV*CSHYTIGQTTMLPL Trigger: CAGGGGCAACATGGTTGTTTGGCCAATGGTGTAGTGGCTGCACAAAACCAGATGGAATGTGAAGATGAGAAGGAGACTACTCTTAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | GCTGATGAGATCCGATACCTTACTATGCTTCCCTTTTaGGGTACAAGAAGTAGGGGCCGGATTAGACTCCTC | + |
Preference number: 6 (lower is better) Translates to: ADEIRYLTMLPF*GTRSRGRIRLL Trigger: GAGGAGTCTAATCCGGCCCCTACTTCTTGTACCTCAAAAGGGAAGCATAGTAAGGTATCGGATCTCATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 72 bp | GCAGCAAAGCTATGCACAGACTTGGACTGGGTCAGCTaGAAACTATGTGGCAGATCTGCACTCTTAGGCATA | + |
Preference number: 6 (lower is better) Translates to: AAKLCTDLDWVS*KLCGRSALLGI Trigger: TATGCCTAAGAGTGCAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAGTCTGTGCATAGCTTTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 90 bp | TCATTGTCTGCAGCAAAGCTATGCACAGACTTGGACTGGGTCAGCTaGAAACTATGTGGCAGATCTGCACTCTTAGGCATATCATCCACA | + |
Preference number: 6 (lower is better) Translates to: SLSAAKLCTDLDWVS*KLCGRSALLGISST Trigger: TGTGGATGATATGCCTAAGAGTGCAGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAGTCTGTGCATAGCTTTGCTGCAGACAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | AGTTTCTGTTCATTAGTCTCCTTCACTTCATGGTGCTaGTCCAACGTATCCAATCCCATGGTGTTCACCCCA | + |
Preference number: 6 (lower is better) Translates to: SFCSLVSFTSWC*SNVSNPMVFTP Trigger: TGGGGTGAACACCATGGGATTGGATACGTTGGACCAGCACCATGAAGTGAAGGAGACTAATGAACAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 72 bp | AGTTCCTCATTGTCTGCAGCAAAGCTATGCACAGACTaGGACTGGGTCAGCTTGAAACTATGTGGCAGATCT | + |
Preference number: 6 (lower is better) Translates to: SSSLSAAKLCTD*DWVSLKLCGRS Trigger: AGATCTGCCACATAGTTTCAAGCTGACCCAGTCCAAGTCTGTGCATAGCTTTGCTGCAGACAATGAGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | GGAGGTGAGGAGGTTAACCCAGGCTGTCCTAGAGTTTaGGGAATATTGAGGTTCATAGTAGAATCTTTCTGC | + |
Preference number: 6 (lower is better) Translates to: GGEEVNPGCPRV*GILRFIVESFC Trigger: GCAGAAAGATTCTACTATGAACCTCAATATTCCTCAAACTCTAGGACAGCCTGGGTTAACCTCCTCACCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | GGAGTCCTGCAGCTGCTGTCAGAAGCATTTTCATCATaGCTATTGGCTATGGATGATGCAGAATCTGTGATG | + |
Preference number: 6 (lower is better) Translates to: GVLQLLSEAFSS*LLAMDDAESVM Trigger: CATCACAGATTCTGCATCATCCATAGCCAATAGTCATGATGAAAATGCTTCTGACAGCAGCTGCAGGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 72 bp | GATTTTCAGCCATTTCTGTTTCAGTTCCTCATTGTCTaGAGCAAAGCTATGCACAGACTTGGACTGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: DFQPFLFQFLIV*SKAMHRLGLGQ Trigger: CTGACCCAGTCCAAGTCTGTGCATAGCTTTGCTGCAGACAATGAGGAACTGAAACAGAAATGGCTGAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069284.14 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CCA 72 bp | CATACACATGGTCACTTCATTATCACGTATCCATCTTaGAGCTCGTTTTCCCAGCTCAGCAGTAGAAACTTC | + |
Preference number: 6 (lower is better) Translates to: HTHGHFIITYPS*SSFSQLSSRNF Trigger: GAAGTTTCTACTGCTGAGCTGGGAAAACGAGCTCCAAGATGGATACGTGATAATGAAGTGACCATGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS GCA 72 bp | GGGAACACGCTCTGTCATGGTTTTAACCAGTTCCACTaGATTATCAAATCCCTTCACGTATTCTCCATACAT | + |
Preference number: 6 (lower is better) Translates to: GNTLCHGFNQFH*IIKSLHVFSIH Trigger: ATGTATGGAGAATACGTGAAGGGATTTGATAATGCAGTGGAACTGGTTAAAACCATGACAGAGCGTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | CATCATGACTATTGGCTATGGATGATGCAGAATCTGTaGTGGTTTCATTTCTTTCTCCATTCAGCACATGTG | + |
Preference number: 6 (lower is better) Translates to: HHDYWLWMMQNL*WFHFFLHSAHV Trigger: CACATGTGCTGAATGGAGAAAGAAATGAAACCATCACAGATTCTGCATCATCCATAGCCAATAGTCATGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | GTTCATAGTAGAATCTTTCTGCAAATCAATGTAACTTaGCAAAACACTGCCTCCTTCAAAGTGGCTGATGAG | + |
Preference number: 6 (lower is better) Translates to: VHSRIFLQINVT*QNTASFKVADE Trigger: CTCATCAGCCACTTTGAAGGAGGCAGTGTTTTGTCAAGTTACATTGATTTGCAGAAAGATTCTACTATGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS TCA 72 bp | CCAGATATCTGGAAAGTGTGTGGATATTCTTCATTGTaGGTCTCCACAATTTTCATTCCATCAATGCCAACT | + |
Preference number: 6 (lower is better) Translates to: PDIWKVCGYSSL*VSTIFIPSMPT Trigger: AGTTGGCATTGATGGAATGAAAATTGTGGAGACTCACAATGAAGAATATCCACACACTTTCCAGATATCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 72 bp | TTCCTTTGCGATTGCATTTCTGAAAGTTTCATGCCTTaGATGAAAAGCATCAATACTTTCTTGAAGGGCCTT | + |
Preference number: 6 (lower is better) Translates to: FLCDCISESFMP*MKSINTFLKGL Trigger: AAGGCCCTTCAAGAAAGTATTGATGCTTTTCATCAAAGGCATGAAACTTTCAGAAATGCAATCGCAAAGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 90 bp | AATGTCATTTTCCTTTGCGATTGCATTTCTGAAAGTTTCATGCCTTaGATGAAAAGCATCAATACTTTCTTGAAGGGCCTTGATCCATTC | + |
Preference number: 6 (lower is better) Translates to: NVIFLCDCISESFMP*MKSINTFLKGLDPF Trigger: GAATGGATCAAGGCCCTTCAAGAAAGTATTGATGCTTTTCATCAAAGGCATGAAACTTTCAGAAATGCAATCGCAAAGGAAAATGACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069284.14 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |
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CDS CAA 72 bp | TTTTATTCACCATCTCTGCAGGAAATGAGCCTCGGTTaGCTTCTTCTAATAGTTTGCAATAAAATACCTGAT | + |
Preference number: 6 (lower is better) Translates to: FYSPSLQEMSLG*LLLIVCNKIPD Trigger: ATCAGGTATTTTATTGCAAACTATTAGAAGAAGCAAACCGAGGCTCATTTCCTGCAGAGATGGTGAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069284.14 ENSMUST00000159542.8 ENSMUST00000161188.9 ENSMUST00000161861.8 ENSMUST00000162671.8 |